BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 036691
         (426 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|9837286|gb|AAG00513.1|AF285162_1 polyubiquitin C [Mus musculus]
          Length = 886

 Score =  263 bits (673), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 247/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEGGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +S   Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGISPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  262 bits (670), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 247/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+S   
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGISPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYNIQKESTLHLVL 679



 Score =  262 bits (670), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 247/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGIS D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 395 LEVEPSDTIENVKAKIQDKEGISPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 454

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 455 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 512

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 513 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 572

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 573 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 632

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 633 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 692

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 693 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 752

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 753 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 812

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 813 GRTLSDYNIQKESTLHLVL 831



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 319 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 379 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGISPDQQRLIFAGKQL-EDGRTL 436

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 437 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 496

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 497 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 556

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 616

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 617 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 676

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 677 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 736

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 737 GRTLSDYNIQKESTLHLVL 755



 Score =  258 bits (658), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 166/439 (37%), Positives = 245/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LE  +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEGGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGISPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  218 bits (555), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEGGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375



 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 129/319 (40%), Positives = 186/319 (58%), Gaps = 9/319 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 547 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 606

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 607 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 664

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 665 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 724

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 725 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 784

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 785 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 844

Query: 294 GGKTITLDVQPYNTVQDVK 312
            GKTITLDV+P  T + VK
Sbjct: 845 TGKTITLDVEPSVTTKKVK 863



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 98/244 (40%), Positives = 146/244 (59%), Gaps = 6/244 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 623 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 682

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 683 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 740

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 741 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 800

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE  +  +
Sbjct: 801 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVTTK 860

Query: 237 DVKE 240
            VK+
Sbjct: 861 KVKQ 864


>gi|195337251|ref|XP_002035242.1| GM14032 [Drosophila sechellia]
 gi|194128335|gb|EDW50378.1| GM14032 [Drosophila sechellia]
          Length = 915

 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 247/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 395 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 454

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 455 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 512

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ +NLEV+ S  I +VKA +    G+    
Sbjct: 513 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTINLEVEPSDTIENVKAKIQDKEGIPPDQ 572

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 573 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 632

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 633 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 692

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 693 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 752

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 753 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGISPDQQRLIFAGKQLED 812

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 813 GRTLSDYNIQKESTLHLVL 831



 Score =  261 bits (667), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 319 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 379 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 436

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 437 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 496

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 497 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTINLEVEPSDTIE 556

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 616

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 617 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 676

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 677 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 736

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 737 GRTLSDYNIQKESTLHLVL 755



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  261 bits (666), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTINLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  255 bits (651), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 471 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 530

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T  + E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 531 GGMQIFVKTLTGKTINL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 588

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 589 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 648

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 649 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 708

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 709 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 768

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK       Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 769 TGKTITLEVEPSDTIENVKAKIQDKEGISPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 828

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 829 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 888

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 889 GRTLSDYNIQKESTLHLVL 907



 Score =  217 bits (553), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|9837284|gb|AAG00512.1|AF285161_1 polyubiquitin C [Mus musculus]
          Length = 734

 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 247/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +S   Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGISPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 247/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+S   
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGISPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 247/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGIS D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEPSDTIENVKAKIQDKEGISPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYNIQKESTLHLVL 679



 Score =  261 bits (667), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGISPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/319 (40%), Positives = 186/319 (58%), Gaps = 9/319 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 395 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 454

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 455 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 512

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 513 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 572

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 573 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 632

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 633 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 692

Query: 294 GGKTITLDVQPYNTVQDVK 312
            GKTITLDV+P  T + VK
Sbjct: 693 TGKTITLDVEPSVTTKKVK 711



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 160/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGISPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 98/244 (40%), Positives = 146/244 (59%), Gaps = 6/244 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 471 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 530

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 531 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 588

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 589 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 648

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE  +  +
Sbjct: 649 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVTTK 708

Query: 237 DVKE 240
            VK+
Sbjct: 709 KVKQ 712


>gi|260806905|ref|XP_002598324.1| hypothetical protein BRAFLDRAFT_113894 [Branchiostoma floridae]
 gi|229283596|gb|EEN54336.1| hypothetical protein BRAFLDRAFT_113894 [Branchiostoma floridae]
          Length = 600

 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 247/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + L+F
Sbjct: 433 GRTLSDYNIQKESTLHLIF 451



 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 245/439 (55%), Gaps = 24/439 (5%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           ++   +             +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LIFVKT---------LTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 499

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 500 GRTLSDYNIQKESTLHLVL 518



 Score =  257 bits (657), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 165/436 (37%), Positives = 244/436 (55%), Gaps = 18/436 (4%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVLPSPFQIFVKTWGGK 296
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +      IFVKT  GK
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL------IFVKTLTGK 458

Query: 297 TITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           TITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 459 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 518

Query: 357 APSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRT 410
                +          +I+L +  S+  E  K K Q         + L+     L+D RT
Sbjct: 519 RLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 578

Query: 411 LADYGMDLSEKVVLVF 426
           L+DY +     + LV 
Sbjct: 579 LSDYNIQKESTLHLVL 594



 Score =  217 bits (553), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|67191208|ref|NP_066289.2| polyubiquitin-C [Homo sapiens]
          Length = 685

 Score =  262 bits (670), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 247/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI SDQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPSDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  261 bits (667), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 247/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+ +  
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPSDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPSDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  260 bits (665), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYNIQKESTLHLVL 679



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPSDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|444434919|dbj|BAM77034.1| ubiquitin C [Homo sapiens]
          Length = 533

 Score =  261 bits (668), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  V +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKAITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 245/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA V    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKVQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GK ITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKAITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 160/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|391348265|ref|XP_003748368.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-A-like [Metaseiulus
           occidentalis]
          Length = 913

 Score =  261 bits (667), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 245/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 471 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 530

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 531 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 588

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 589 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 648

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y ++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 649 QRLIFAGKQLEDGRTLSDYSIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 708

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 709 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 768

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 769 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 828

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 829 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLED 888

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 889 GRTLSDYNIQKESTLHLVL 907



 Score =  257 bits (657), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 166/439 (37%), Positives = 245/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L E+  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EEGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL  Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLLDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYSIQKESTLHLVL 679



 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 164/439 (37%), Positives = 243/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I+N+K  +  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LDVEASDTIENVKVKLQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LE+ +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL  Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLLDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 164/439 (37%), Positives = 241/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ ++ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDVELADTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG  + L+V+ S  I +VK  +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGXTITLDVEASDTIENVKVKLQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L E   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL DY +     + LV 
Sbjct: 433 GRTLLDYNIQKESTLHLVL 451



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/299 (34%), Positives = 159/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + L+V+ +  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLDVELADTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G TITLDV+  +T+++VKV
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGXTITLDVEASDTIENVKV 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           KL DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KLQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|170034793|ref|XP_001845257.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167876387|gb|EDS39770.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 1065

 Score =  261 bits (667), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  261 bits (667), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  261 bits (667), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  261 bits (667), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYNIQKESTLHLVL 679



 Score =  261 bits (667), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 319 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 379 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 436

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 437 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 496

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 497 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 556

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 616

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 617 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 676

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 677 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 736

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 737 GRTLSDYNIQKESTLHLVL 755



 Score =  261 bits (667), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 395 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 454

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 455 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 512

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 513 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 572

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 573 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 632

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 633 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 692

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 693 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 752

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 753 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 812

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 813 GRTLSDYNIQKESTLHLVL 831



 Score =  261 bits (667), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 471 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 530

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 531 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 588

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 589 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 648

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 649 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 708

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 709 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 768

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 769 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 828

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 829 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 888

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 889 GRTLSDYNIQKESTLHLVL 907



 Score =  261 bits (667), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 547 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 606

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 607 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 664

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 665 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 724

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 725 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 784

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 785 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 844

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 845 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 904

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 905 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 964

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 965 GRTLSDYNIQKESTLHLVL 983



 Score =  261 bits (667), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1    MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
            ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 623  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 682

Query: 60   SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
              M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 683  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 740

Query: 120  TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
            +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 741  SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 800

Query: 180  HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
              +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 801  QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 860

Query: 237  DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
            +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 861  NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 920

Query: 294  GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
             GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 921  TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 980

Query: 354  MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
            +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 981  LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 1040

Query: 408  DRTLADYGMDLSEKVVLVF 426
             RTL+DY +     + LV 
Sbjct: 1041 GRTLSDYNIQKESTLHLVL 1059



 Score =  217 bits (553), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|510473|emb|CAA52416.1| polyubiquitin [Artemia franciscana]
          Length = 697

 Score =  261 bits (667), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKQGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  261 bits (666), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKQGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  259 bits (663), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 166/439 (37%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ K+GI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKQGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  259 bits (663), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 166/439 (37%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  K+GI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEPSDTIENVKAKIQDKQGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYNIQKESTLHLVL 679



 Score =  218 bits (554), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKQGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|347966903|ref|XP_550846.3| AGAP001971-PA [Anopheles gambiae str. PEST]
 gi|333469848|gb|EAL38503.3| AGAP001971-PA [Anopheles gambiae str. PEST]
          Length = 1065

 Score =  261 bits (667), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  261 bits (667), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  261 bits (667), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  261 bits (667), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYNIQKESTLHLVL 679



 Score =  261 bits (667), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 319 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 379 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 436

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 437 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 496

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 497 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 556

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 616

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 617 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 676

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 677 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 736

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 737 GRTLSDYNIQKESTLHLVL 755



 Score =  261 bits (667), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 395 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 454

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 455 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 512

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 513 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 572

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 573 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 632

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 633 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 692

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 693 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 752

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 753 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 812

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 813 GRTLSDYNIQKESTLHLVL 831



 Score =  261 bits (667), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 471 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 530

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 531 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 588

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 589 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 648

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 649 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 708

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 709 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 768

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 769 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 828

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 829 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 888

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 889 GRTLSDYNIQKESTLHLVL 907



 Score =  261 bits (667), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 547 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 606

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 607 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 664

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 665 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 724

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 725 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 784

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 785 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 844

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 845 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 904

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 905 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 964

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 965 GRTLSDYNIQKESTLHLVL 983



 Score =  261 bits (667), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1    MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
            ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 623  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 682

Query: 60   SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
              M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 683  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 740

Query: 120  TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
            +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 741  SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 800

Query: 180  HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
              +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 801  QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 860

Query: 237  DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
            +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 861  NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 920

Query: 294  GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
             GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 921  TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 980

Query: 354  MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
            +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 981  LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 1040

Query: 408  DRTLADYGMDLSEKVVLVF 426
             RTL+DY +     + LV 
Sbjct: 1041 GRTLSDYNIQKESTLHLVL 1059



 Score =  217 bits (553), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|145046250|ref|NP_001013290.2| ubiquitin [Danio rerio]
          Length = 610

 Score =  261 bits (666), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  261 bits (666), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  261 bits (666), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  217 bits (553), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|157138587|ref|XP_001664266.1| ubiquitin [Aedes aegypti]
 gi|108880554|gb|EAT44779.1| AAEL003877-PA [Aedes aegypti]
          Length = 761

 Score =  261 bits (666), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  261 bits (666), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  261 bits (666), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  261 bits (666), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYNIQKESTLHLVL 679



 Score =  261 bits (666), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 319 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 379 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 436

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 437 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 496

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 497 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 556

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 616

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 617 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 676

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 677 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 736

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 737 GRTLSDYNIQKESTLHLVL 755



 Score =  217 bits (553), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|195125345|ref|XP_002007139.1| GI12770 [Drosophila mojavensis]
 gi|193918748|gb|EDW17615.1| GI12770 [Drosophila mojavensis]
          Length = 991

 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYNIQKESTLHLVL 679



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 319 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 379 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 436

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 437 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 496

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 497 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 556

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 616

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 617 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 676

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 677 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 736

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 737 GRTLSDYNIQKESTLHLVL 755



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 395 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 454

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 455 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 512

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 513 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 572

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 573 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 632

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 633 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 692

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 693 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 752

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 753 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 812

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 813 GRTLSDYNIQKESTLHLVL 831



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 471 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 530

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 531 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 588

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 589 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 648

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 649 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 708

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 709 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 768

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 769 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 828

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 829 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 888

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 889 GRTLSDYNIQKESTLHLVL 907



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 547 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 606

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 607 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 664

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 665 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 724

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 725 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 784

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 785 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 844

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 845 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 904

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 905 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 964

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 965 GRTLSDYNIQKESTLHLVL 983



 Score =  217 bits (553), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|321469467|gb|EFX80447.1| hypothetical protein DAPPUDRAFT_243700 [Daphnia pulex]
          Length = 764

 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYNIQKESTLHLVL 679



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 319 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 379 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 436

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 437 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 496

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 497 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 556

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 616

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 617 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 676

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 677 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 736

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 737 GRTLSDYNIQKESTLHLVL 755



 Score =  217 bits (553), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|21429768|gb|AAM50562.1| AT20865p [Drosophila melanogaster]
          Length = 1067

 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYNIQKESTLHLVL 679



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 319 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 379 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 436

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 437 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 496

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 497 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 556

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 616

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 617 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 676

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 677 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 736

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 737 GRTLSDYNIQKESTLHLVL 755



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 395 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 454

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 455 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 512

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 513 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 572

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 573 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 632

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 633 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 692

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 693 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 752

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 753 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 812

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 813 GRTLSDYNIQKESTLHLVL 831



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 471 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 530

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 531 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 588

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 589 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 648

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 649 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 708

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 709 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 768

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 769 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 828

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 829 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 888

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 889 GRTLSDYNIQKESTLHLVL 907



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 547 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 606

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 607 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 664

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 665 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 724

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 725 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 784

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 785 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 844

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 845 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 904

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 905 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 964

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 965 GRTLSDYNIQKESTLHLVL 983



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1    MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
            ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 623  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 682

Query: 60   SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
              M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 683  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 740

Query: 120  TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
            +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 741  SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 800

Query: 180  HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
              +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 801  QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 860

Query: 237  DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
            +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 861  NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 920

Query: 294  GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
             GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 921  TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 980

Query: 354  MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
            +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 981  LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 1040

Query: 408  DRTLADYGMDLSEKVVLVF 426
             RTL+DY +     + LV 
Sbjct: 1041 GRTLSDYNIQKESTLHLVL 1059



 Score =  217 bits (553), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|29612653|gb|AAH49473.1| Zgc:172187 protein [Danio rerio]
          Length = 480

 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 37  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 96

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 97  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 154

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 155 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 214

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 215 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 274

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 275 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 334

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 335 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 394

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 395 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 454

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 455 GRTLSDYNIQKESTLHLVL 473



 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 138/377 (36%), Positives = 207/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK    +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 23  MQIFVKTLAGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 80

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 81  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 140

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 141 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 200

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 201 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 260

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 261 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 320

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 321 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 380

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 381 TLSDYNIQKESTLHLVL 397



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 82/244 (33%), Positives = 127/244 (52%), Gaps = 14/244 (5%)

Query: 197 FYDMKDE-----CLLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLG 251
           F++ +D+     C +     ++QIFV+T   + + LEVE    + +VK  + +   +   
Sbjct: 2   FFEEEDQFQESYCSVSTQTLTMQIFVKTLAGKTITLEVEPSDTIENVKAKIQDKEGIPPD 61

Query: 252 NQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTV 308
            Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+
Sbjct: 62  QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTI 121

Query: 309 QDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLI 368
           ++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +      
Sbjct: 122 ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKT 181

Query: 369 FIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKV 422
               +I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     +
Sbjct: 182 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 241

Query: 423 VLVF 426
            LV 
Sbjct: 242 HLVL 245


>gi|195137906|ref|XP_002012597.1| GI14272 [Drosophila mojavensis]
 gi|193906411|gb|EDW05278.1| GI14272 [Drosophila mojavensis]
          Length = 668

 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  217 bits (553), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|270010560|gb|EFA07008.1| hypothetical protein TcasGA2_TC009978 [Tribolium castaneum]
          Length = 685

 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYNIQKESTLHLVL 679



 Score =  217 bits (553), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|194762588|ref|XP_001963416.1| GF20300 [Drosophila ananassae]
 gi|190629075|gb|EDV44492.1| GF20300 [Drosophila ananassae]
 gi|389610665|dbj|BAM18944.1| ubiquitin [Papilio polytes]
          Length = 610

 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  217 bits (553), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|189441656|gb|AAI67447.1| Zgc:172187 protein [Danio rerio]
          Length = 458

 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  217 bits (553), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|350592414|ref|XP_003483459.1| PREDICTED: polyubiquitin-C isoform 1 [Sus scrofa]
 gi|350592416|ref|XP_003483460.1| PREDICTED: polyubiquitin-C isoform 2 [Sus scrofa]
 gi|350592418|ref|XP_003483461.1| PREDICTED: polyubiquitin-C isoform 3 [Sus scrofa]
 gi|350592420|ref|XP_003483462.1| PREDICTED: polyubiquitin-C isoform 4 [Sus scrofa]
 gi|302595945|sp|P0CG68.1|UBC_PIG RecName: Full=Polyubiquitin-C; Contains: RecName:
           Full=Ubiquitin-related; Contains: RecName:
           Full=Ubiquitin; Flags: Precursor
          Length = 533

 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  259 bits (663), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 166/439 (37%), Positives = 245/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKGKIQEKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  217 bits (553), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKGKIQEKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|329665078|ref|NP_001193236.1| polyubiquitin-C [Bos taurus]
 gi|302595881|sp|P0CH28.1|UBC_BOVIN RecName: Full=Polyubiquitin-C; Contains: RecName:
           Full=Ubiquitin-related; Contains: RecName:
           Full=Ubiquitin; Flags: Precursor
          Length = 690

 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYNIQKESTLHLVL 679



 Score =  259 bits (663), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 166/439 (37%), Positives = 245/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKGKIQEKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  252 bits (643), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 151/373 (40%), Positives = 221/373 (59%), Gaps = 9/373 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 319 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 379 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 436

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 437 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 496

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 497 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 556

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 616

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 617 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 676

Query: 354 MVLAPSSRIIELP 366
           +VL     ++  P
Sbjct: 677 LVLRLRGGVLSSP 689



 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKGKIQEKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|194866181|ref|XP_001971796.1| GG14240 [Drosophila erecta]
 gi|190653579|gb|EDV50822.1| GG14240 [Drosophila erecta]
          Length = 991

 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYNIQKESTLHLVL 679



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 319 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 379 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 436

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 437 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 496

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 497 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 556

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 616

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 617 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 676

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 677 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 736

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 737 GRTLSDYNIQKESTLHLVL 755



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 395 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 454

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 455 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 512

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 513 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 572

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 573 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 632

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 633 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 692

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 693 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 752

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 753 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 812

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 813 GRTLSDYNIQKESTLHLVL 831



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 471 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 530

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 531 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 588

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 589 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 648

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 649 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 708

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 709 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 768

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 769 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 828

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 829 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 888

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 889 GRTLSDYNIQKESTLHLVL 907



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 547 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 606

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 607 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 664

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 665 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 724

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 725 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 784

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 785 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 844

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 845 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 904

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 905 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 964

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 965 GRTLSDYNIQKESTLHLVL 983



 Score =  217 bits (553), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|47682711|gb|AAH69831.1| Zgc:172187 protein [Danio rerio]
 gi|62530956|gb|AAH93444.1| Zgc:172187 protein [Danio rerio]
          Length = 624

 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 29  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 88

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 89  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 146

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 147 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 206

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 207 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 266

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 267 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 326

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 327 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 386

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 387 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 446

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 447 GRTLSDYNIQKESTLHLVL 465



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 105 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 164

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 165 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 222

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 223 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 282

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 283 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 342

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 343 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 402

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 403 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 462

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 463 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 522

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 523 GRTLSDYNIQKESTLHLVL 541



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 181 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 240

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 241 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 298

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 299 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 358

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 359 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 418

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 419 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 478

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 479 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 538

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 539 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 598

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 599 GRTLSDYNIQKESTLHLVL 617



 Score =  217 bits (553), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 15  MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 72

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 73  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 132

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 133 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 192

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 193 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 252

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 253 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 312

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 313 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 372

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 373 TLSDYNIQKESTLHLVL 389



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 80/232 (34%), Positives = 121/232 (52%), Gaps = 9/232 (3%)

Query: 204 CLLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLE 263
           C +     ++QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE
Sbjct: 6   CSVSTQTLTMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 65

Query: 264 ACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQ 320
             +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK  
Sbjct: 66  DGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG 125

Query: 321 TPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISI 380
            P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  
Sbjct: 126 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEP 185

Query: 381 SEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 186 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 237


>gi|208022675|ref|NP_001129078.1| polyubiquitin-C [Pan troglodytes]
 gi|302595944|sp|P0CG64.1|UBC_PANTR RecName: Full=Polyubiquitin-C; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|302595946|sp|P0CG61.1|UBC_PONPY RecName: Full=Polyubiquitin-C; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|28316338|dbj|BAC56952.1| polyubiquitin C [Pan troglodytes]
 gi|28316342|dbj|BAC56954.1| polyubiquitin C [Pongo pygmaeus]
          Length = 761

 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYNIQKESTLHLVL 679



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 319 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 379 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 436

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 437 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 496

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 497 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 556

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 616

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 617 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 676

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 677 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 736

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 737 GRTLSDYNIQKESTLHLVL 755



 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|156358687|ref|XP_001624647.1| predicted protein [Nematostella vectensis]
 gi|170055263|ref|XP_001863505.1| polyubiquitin [Culex quinquefasciatus]
 gi|156211440|gb|EDO32547.1| predicted protein [Nematostella vectensis]
 gi|167875249|gb|EDS38632.1| polyubiquitin [Culex quinquefasciatus]
          Length = 533

 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|432899994|ref|XP_004076672.1| PREDICTED: polyubiquitin-C-like [Oryzias latipes]
          Length = 533

 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|46359622|dbj|BAD15290.1| polyubiquitin [Crassostrea gigas]
          Length = 685

 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYNIQKESTLHLVL 679



 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|391358178|sp|P0CG48.3|UBC_HUMAN RecName: Full=Polyubiquitin-C; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|340068|gb|AAA36789.1| ubiquitin [Homo sapiens]
 gi|2647408|dbj|BAA23632.1| polyubiquitin UbC [Homo sapiens]
 gi|24657522|gb|AAH39193.1| Ubiquitin C [Homo sapiens]
 gi|28316336|dbj|BAC56951.1| polyubiquitin C [Homo sapiens]
 gi|440903539|gb|ELR54183.1| Polyubiquitin-C, partial [Bos grunniens mutus]
          Length = 685

 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYNIQKESTLHLVL 679



 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|62089150|dbj|BAD93019.1| ubiquitin C variant [Homo sapiens]
          Length = 1309

 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 31  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 90

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 91  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 148

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 149 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 208

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 209 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 268

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 269 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 328

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 329 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 388

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 389 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 448

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 449 GRTLSDYNIQKESTLHLVL 467



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 107 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 166

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 167 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 224

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 225 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 284

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 285 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 344

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 345 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 404

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 405 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 464

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 465 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 524

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 525 GRTLSDYNIQKESTLHLVL 543



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 183 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 242

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 243 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 300

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 301 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 360

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 361 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 420

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 421 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 480

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 481 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 540

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 541 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 600

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 601 GRTLSDYNIQKESTLHLVL 619



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 259 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 318

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 319 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 376

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 377 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 436

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 437 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 496

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 497 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 556

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 557 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 616

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 617 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 676

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 677 GRTLSDYNIQKESTLHLVL 695



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 335 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 394

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 395 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 452

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 453 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 512

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 513 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 572

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 573 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 632

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 633 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 692

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 693 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 752

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 753 GRTLSDYNIQKESTLHLVL 771



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 411 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 470

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 471 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 528

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 529 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 588

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 589 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 648

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 649 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 708

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 709 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 768

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 769 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 828

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 829 GRTLSDYNIQKESTLHLVL 847



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 487 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 546

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 547 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 604

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 605 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 664

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 665 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 724

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 725 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 784

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 785 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 844

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 845 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 904

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 905 GRTLSDYNIQKESTLHLVL 923



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 563 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 622

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 623 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 680

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 681 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 740

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 741 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 800

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 801 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 860

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 861 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 920

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 921 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 980

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 981 GRTLSDYNIQKESTLHLVL 999



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1    MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
            ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 639  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 698

Query: 60   SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
              M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 699  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 756

Query: 120  TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
            +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 757  SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 816

Query: 180  HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
              +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 817  QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 876

Query: 237  DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
            +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 877  NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 936

Query: 294  GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
             GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 937  TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 996

Query: 354  MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
            +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 997  LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 1056

Query: 408  DRTLADYGMDLSEKVVLVF 426
             RTL+DY +     + LV 
Sbjct: 1057 GRTLSDYNIQKESTLHLVL 1075



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1    MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
            ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 715  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 774

Query: 60   SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
              M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 775  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 832

Query: 120  TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
            +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 833  SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 892

Query: 180  HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
              +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 893  QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 952

Query: 237  DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
            +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 953  NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 1012

Query: 294  GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
             GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 1013 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 1072

Query: 354  MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
            +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 1073 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 1132

Query: 408  DRTLADYGMDLSEKVVLVF 426
             RTL+DY +     + LV 
Sbjct: 1133 GRTLSDYNIQKESTLHLVL 1151



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1    MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
            ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 791  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 850

Query: 60   SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
              M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 851  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 908

Query: 120  TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
            +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 909  SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 968

Query: 180  HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
              +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 969  QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 1028

Query: 237  DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
            +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 1029 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 1088

Query: 294  GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
             GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 1089 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 1148

Query: 354  MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
            +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 1149 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 1208

Query: 408  DRTLADYGMDLSEKVVLVF 426
             RTL+DY +     + LV 
Sbjct: 1209 GRTLSDYNIQKESTLHLVL 1227



 Score =  259 bits (661), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 166/439 (37%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1    MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
            ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 867  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 926

Query: 60   SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
              M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 927  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 984

Query: 120  TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
            +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 985  SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 1044

Query: 180  HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
              +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 1045 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 1104

Query: 237  DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
            +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 1105 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 1164

Query: 294  GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
             GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 1165 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 1224

Query: 354  MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
            +VL     +          +I+L +  S+  E  K K Q         + L+     L++
Sbjct: 1225 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEN 1284

Query: 408  DRTLADYGMDLSEKVVLVF 426
             RTL+DY +     + LV 
Sbjct: 1285 GRTLSDYNIQKESTLHLVL 1303



 Score =  217 bits (553), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 17  MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 74

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 75  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 134

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 135 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 194

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 195 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 254

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 255 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 314

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 315 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 374

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 375 TLSDYNIQKESTLHLVL 391



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 79/224 (35%), Positives = 119/224 (53%), Gaps = 9/224 (4%)

Query: 212 SIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASY 271
           ++QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y
Sbjct: 16  TMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 75

Query: 272 GIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSI 328
            I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q +
Sbjct: 76  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 135

Query: 329 VFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAK 388
           +FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K
Sbjct: 136 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVK 195

Query: 389 VKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
            K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 196 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 239


>gi|443688720|gb|ELT91320.1| hypothetical protein CAPTEDRAFT_162204 [Capitella teleta]
          Length = 457

 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|334324804|ref|XP_001373422.2| PREDICTED: polyubiquitin-C-like [Monodelphis domestica]
          Length = 761

 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYNIQKESTLHLVL 679



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 319 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 379 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 436

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 437 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 496

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 497 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 556

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 616

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 617 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 676

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 677 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 736

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 737 GRTLSDYNIQKESTLHLVL 755



 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|195011548|ref|XP_001983203.1| GH15714 [Drosophila grimshawi]
 gi|193896685|gb|EDV95551.1| GH15714 [Drosophila grimshawi]
          Length = 535

 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  217 bits (553), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|194749344|ref|XP_001957099.1| GF10254 [Drosophila ananassae]
 gi|190624381|gb|EDV39905.1| GF10254 [Drosophila ananassae]
          Length = 837

 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYNIQKESTLHLVL 679



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 319 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 379 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 436

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 437 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 496

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 497 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 556

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 616

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 617 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 676

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 677 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 736

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 737 GRTLSDYNIQKESTLHLVL 755



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 395 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 454

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 455 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 512

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 513 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 572

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 573 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 632

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 633 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 692

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 693 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 752

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 753 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 812

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 813 GRTLSDYNIQKESTLHLVL 831



 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|323714263|ref|NP_001071272.2| ubuquitin c [Danio rerio]
          Length = 533

 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|157138589|ref|XP_001664267.1| ubiquitin [Aedes aegypti]
 gi|241694258|ref|XP_002402192.1| ubiquitin/40S ribosomal protein S27A fusion, putative [Ixodes
           scapularis]
 gi|108880555|gb|EAT44780.1| AAEL003877-PB [Aedes aegypti]
 gi|215504684|gb|EEC14178.1| ubiquitin/40S ribosomal protein S27A fusion, putative [Ixodes
           scapularis]
          Length = 609

 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|195042539|ref|XP_001991451.1| GH12661 [Drosophila grimshawi]
 gi|193901209|gb|EDW00076.1| GH12661 [Drosophila grimshawi]
          Length = 699

 Score =  261 bits (666), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  261 bits (666), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  260 bits (665), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 165/427 (38%), Positives = 242/427 (56%), Gaps = 15/427 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADY 414
            RTL+DY
Sbjct: 585 GRTLSDY 591



 Score =  240 bits (613), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 145/357 (40%), Positives = 212/357 (59%), Gaps = 9/357 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHS 350
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK S
Sbjct: 541 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 597



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|195132655|ref|XP_002010758.1| GI21526 [Drosophila mojavensis]
 gi|260830119|ref|XP_002610009.1| hypothetical protein BRAFLDRAFT_131116 [Branchiostoma floridae]
 gi|193907546|gb|EDW06413.1| GI21526 [Drosophila mojavensis]
 gi|229295371|gb|EEN66019.1| hypothetical protein BRAFLDRAFT_131116 [Branchiostoma floridae]
          Length = 609

 Score =  261 bits (666), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  261 bits (666), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  261 bits (666), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|327291982|ref|XP_003230699.1| PREDICTED: polyubiquitin-C-like [Anolis carolinensis]
          Length = 685

 Score =  261 bits (666), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  261 bits (666), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  261 bits (666), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  261 bits (666), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYNIQKESTLHLVL 679



 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|158256510|dbj|BAF84228.1| unnamed protein product [Homo sapiens]
          Length = 609

 Score =  261 bits (666), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  259 bits (663), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 245/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S   E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSATIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  259 bits (662), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 245/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P  T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSATIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|195448336|ref|XP_002071613.1| GK10077 [Drosophila willistoni]
 gi|194167698|gb|EDW82599.1| GK10077 [Drosophila willistoni]
          Length = 610

 Score =  261 bits (666), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  261 bits (666), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  261 bits (666), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|51873890|gb|AAH80583.1| Unknown (protein for IMAGE:2822684), partial [Homo sapiens]
          Length = 698

 Score =  261 bits (666), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 28  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 87

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 88  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 145

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 146 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 205

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 206 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 265

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 266 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 325

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 326 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 385

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 386 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 445

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 446 GRTLSDYNIQKESTLHLVL 464



 Score =  261 bits (666), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 104 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 163

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 164 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 221

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 222 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 281

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 282 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 341

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 342 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 401

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 402 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 461

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 462 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 521

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 522 GRTLSDYNIQKESTLHLVL 540



 Score =  261 bits (666), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 180 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 239

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 240 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 297

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 298 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 357

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 358 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 417

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 418 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 477

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 478 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 537

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 538 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 597

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 598 GRTLSDYNIQKESTLHLVL 616



 Score =  261 bits (666), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 256 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 315

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 316 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 373

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 374 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 433

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 434 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 493

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 494 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 553

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 554 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 613

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 614 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 673

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 674 GRTLSDYNIQKESTLHLVL 692



 Score =  217 bits (553), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 14  MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 71

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 72  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 131

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 132 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 191

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 192 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 251

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 252 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 311

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 312 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 371

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 372 TLSDYNIQKESTLHLVL 388



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 79/224 (35%), Positives = 119/224 (53%), Gaps = 9/224 (4%)

Query: 212 SIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASY 271
           ++QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y
Sbjct: 13  TMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 72

Query: 272 GIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSI 328
            I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q +
Sbjct: 73  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 132

Query: 329 VFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAK 388
           +FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K
Sbjct: 133 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVK 192

Query: 389 VKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
            K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 193 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 236


>gi|346986300|ref|NP_001231307.1| polyubiquitin [Cricetulus griseus]
 gi|2627133|dbj|BAA23488.1| polyubiquitin [Cricetulus griseus]
          Length = 1038

 Score =  261 bits (666), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  261 bits (666), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  260 bits (665), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNVQKESTLHLVL 603



 Score =  260 bits (665), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 395 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 454

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 455 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 512

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 513 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 572

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 573 QRLIFAGKQLEDGRTLSDYNVQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 632

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 633 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 692

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 693 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 752

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 753 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 812

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 813 GRTLSDYNIQKESTLHLVL 831



 Score =  260 bits (664), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 166/439 (37%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 319 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 379 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 436

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 437 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 496

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 497 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 556

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y ++    L +   L    QIFVKT 
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNVQKESTLHLVLRLRGGMQIFVKTL 616

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 617 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 676

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 677 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 736

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 737 GRTLSDYNIQKESTLHLVL 755



 Score =  260 bits (664), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 166/439 (37%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 471 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 530

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 531 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 588

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  N++ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 589 SDYNVQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 648

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 649 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 708

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 709 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 768

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 769 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 828

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 829 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 888

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 889 GRTLSDYNIQKESTLHLVL 907



 Score =  260 bits (664), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 166/439 (37%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY ++  STLH + +  
Sbjct: 547 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNVQKESTLHLVLRLR 606

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 607 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 664

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 665 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 724

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 725 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 784

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 785 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 844

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 845 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 904

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 905 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 964

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 965 GRTLSDYNIQKESTLHLVL 983



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 128/319 (40%), Positives = 187/319 (58%), Gaps = 9/319 (2%)

Query: 1    MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
            ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 699  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 758

Query: 60   SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
              M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 759  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 816

Query: 120  TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
            +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 817  SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 876

Query: 180  HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
              +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 877  QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 936

Query: 237  DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
            +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 937  NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 996

Query: 294  GGKTITLDVQPYNTVQDVK 312
             GKTITL+V+P NT++  K
Sbjct: 997  TGKTITLEVEPSNTIKKSK 1015



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/244 (40%), Positives = 145/244 (59%), Gaps = 6/244 (2%)

Query: 1    MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
            ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 775  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 834

Query: 60   SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
              M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 835  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 892

Query: 120  TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
            +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 893  SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 952

Query: 180  HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
              +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    ++
Sbjct: 953  QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSNTIK 1012

Query: 237  DVKE 240
              K+
Sbjct: 1013 KSKQ 1016


>gi|444434917|dbj|BAM77033.1| ubiquitin C [Homo sapiens]
          Length = 685

 Score =  261 bits (666), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  261 bits (666), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYNIQKESTLHLVL 679



 Score =  260 bits (665), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPCDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  258 bits (660), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 166/439 (37%), Positives = 245/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+  + I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPCDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  215 bits (547), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 138/377 (36%), Positives = 207/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+    I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPCDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|223646766|gb|ACN10141.1| Ubiquitin [Salmo salar]
 gi|223649344|gb|ACN11430.1| Ubiquitin [Salmo salar]
 gi|223672621|gb|ACN12492.1| Ubiquitin [Salmo salar]
          Length = 457

 Score =  261 bits (666), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|24640086|ref|NP_727078.1| Ubiquitin-5E [Drosophila melanogaster]
 gi|194896187|ref|XP_001978429.1| GG17684 [Drosophila erecta]
 gi|22831806|gb|AAF46142.3| Ubiquitin-5E [Drosophila melanogaster]
 gi|190650078|gb|EDV47356.1| GG17684 [Drosophila erecta]
 gi|208879484|gb|ACI31287.1| GH17761p [Drosophila melanogaster]
          Length = 534

 Score =  260 bits (665), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  260 bits (665), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|148235355|ref|NP_001080865.1| ubiquitin C [Xenopus laevis]
 gi|32766481|gb|AAH54976.1| Ubc-prov protein [Xenopus laevis]
          Length = 609

 Score =  260 bits (665), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  260 bits (665), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  260 bits (665), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|297263833|ref|XP_002798871.1| PREDICTED: hypothetical protein LOC712934 isoform 2 [Macaca
           mulatta]
 gi|297263835|ref|XP_001102090.2| PREDICTED: hypothetical protein LOC712934 isoform 1 [Macaca
           mulatta]
 gi|297263839|ref|XP_002798873.1| PREDICTED: hypothetical protein LOC712934 isoform 4 [Macaca
           mulatta]
 gi|297263841|ref|XP_002798874.1| PREDICTED: hypothetical protein LOC712934 isoform 5 [Macaca
           mulatta]
 gi|297263843|ref|XP_002798875.1| PREDICTED: hypothetical protein LOC712934 isoform 6 [Macaca
           mulatta]
 gi|297263845|ref|XP_002798876.1| PREDICTED: hypothetical protein LOC712934 isoform 7 [Macaca
           mulatta]
 gi|297263847|ref|XP_002798877.1| PREDICTED: hypothetical protein LOC712934 isoform 8 [Macaca
           mulatta]
 gi|297263849|ref|XP_002798878.1| PREDICTED: hypothetical protein LOC712934 isoform 9 [Macaca
           mulatta]
 gi|402888093|ref|XP_003907411.1| PREDICTED: polyubiquitin-C isoform 1 [Papio anubis]
 gi|402888095|ref|XP_003907412.1| PREDICTED: polyubiquitin-C isoform 2 [Papio anubis]
 gi|402888097|ref|XP_003907413.1| PREDICTED: polyubiquitin-C isoform 3 [Papio anubis]
 gi|402888099|ref|XP_003907414.1| PREDICTED: polyubiquitin-C isoform 4 [Papio anubis]
 gi|402888101|ref|XP_003907415.1| PREDICTED: polyubiquitin-C isoform 5 [Papio anubis]
 gi|402888103|ref|XP_003907416.1| PREDICTED: polyubiquitin-C isoform 6 [Papio anubis]
 gi|402888105|ref|XP_003907417.1| PREDICTED: polyubiquitin-C isoform 7 [Papio anubis]
 gi|402888107|ref|XP_003907418.1| PREDICTED: polyubiquitin-C isoform 8 [Papio anubis]
 gi|402888109|ref|XP_003907419.1| PREDICTED: polyubiquitin-C isoform 9 [Papio anubis]
 gi|402888111|ref|XP_003907420.1| PREDICTED: polyubiquitin-C isoform 10 [Papio anubis]
 gi|441630368|ref|XP_004089541.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
 gi|441630371|ref|XP_004089542.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
          Length = 457

 Score =  260 bits (665), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|2627129|dbj|BAA23486.1| polyubiquitin [Homo sapiens]
          Length = 609

 Score =  260 bits (665), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  258 bits (660), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 166/439 (37%), Positives = 245/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+  +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITXEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  258 bits (660), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 166/439 (37%), Positives = 245/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTIT +V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITXEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|55742507|ref|NP_001006688.1| ubiquitin C [Xenopus (Silurana) tropicalis]
 gi|297693402|ref|XP_002824008.1| PREDICTED: polyubiquitin-C isoform 1 [Pongo abelii]
 gi|297693404|ref|XP_002824009.1| PREDICTED: polyubiquitin-C isoform 2 [Pongo abelii]
 gi|297693406|ref|XP_002824010.1| PREDICTED: polyubiquitin-C isoform 3 [Pongo abelii]
 gi|297693408|ref|XP_002824011.1| PREDICTED: polyubiquitin-C isoform 4 [Pongo abelii]
 gi|297693416|ref|XP_002824015.1| PREDICTED: polyubiquitin-C isoform 8 [Pongo abelii]
 gi|297693418|ref|XP_002824016.1| PREDICTED: polyubiquitin-C isoform 9 [Pongo abelii]
 gi|297693420|ref|XP_002824017.1| PREDICTED: polyubiquitin-C isoform 10 [Pongo abelii]
 gi|395745069|ref|XP_003778208.1| PREDICTED: polyubiquitin-C [Pongo abelii]
 gi|302595941|sp|P0CG66.1|UBC_GORGO RecName: Full=Polyubiquitin-C; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|28316340|dbj|BAC56953.1| polyubiquitin C [Gorilla gorilla]
 gi|49257812|gb|AAH74652.1| ubiquitin C [Xenopus (Silurana) tropicalis]
 gi|89271842|emb|CAJ82066.1| novel protein [Xenopus (Silurana) tropicalis]
 gi|444434923|dbj|BAM77036.1| ubiquitin C [Homo sapiens]
          Length = 609

 Score =  260 bits (665), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  260 bits (665), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  260 bits (665), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|444434921|dbj|BAM77035.1| ubiquitin C [Homo sapiens]
          Length = 685

 Score =  260 bits (665), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  260 bits (665), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYNIQKESTLHLVL 679



 Score =  258 bits (659), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 166/439 (37%), Positives = 245/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ   ++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  258 bits (659), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 166/439 (37%), Positives = 245/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D     FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 207/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
            I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 SIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|390176272|ref|XP_003736175.1| GA30006 [Drosophila pseudoobscura pseudoobscura]
 gi|388858740|gb|EIM52248.1| GA30006 [Drosophila pseudoobscura pseudoobscura]
          Length = 687

 Score =  260 bits (665), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  260 bits (665), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  260 bits (665), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  260 bits (665), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYNIQKESTLHLVL 679



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|213982779|ref|NP_001135561.1| uncharacterized protein LOC100216108 [Xenopus (Silurana)
           tropicalis]
 gi|126323857|ref|XP_001366753.1| PREDICTED: polyubiquitin [Monodelphis domestica]
 gi|332254371|ref|XP_003276301.1| PREDICTED: polyubiquitin-C isoform 1 [Nomascus leucogenys]
 gi|332254373|ref|XP_003276302.1| PREDICTED: polyubiquitin-C isoform 2 [Nomascus leucogenys]
 gi|332254377|ref|XP_003276304.1| PREDICTED: polyubiquitin-C isoform 4 [Nomascus leucogenys]
 gi|332254379|ref|XP_003276305.1| PREDICTED: polyubiquitin-C isoform 5 [Nomascus leucogenys]
 gi|441630332|ref|XP_004089532.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
 gi|441630335|ref|XP_004089533.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
 gi|441630338|ref|XP_004089534.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
 gi|441630344|ref|XP_004089536.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
 gi|441630354|ref|XP_004089537.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
 gi|441630357|ref|XP_004089538.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
 gi|441630362|ref|XP_004089539.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
 gi|441630365|ref|XP_004089540.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
 gi|119618869|gb|EAW98463.1| ubiquitin C, isoform CRA_a [Homo sapiens]
 gi|119618870|gb|EAW98464.1| ubiquitin C, isoform CRA_a [Homo sapiens]
 gi|119618871|gb|EAW98465.1| ubiquitin C, isoform CRA_a [Homo sapiens]
 gi|119618872|gb|EAW98466.1| ubiquitin C, isoform CRA_a [Homo sapiens]
 gi|195539774|gb|AAI68051.1| Unknown (protein for MGC:185560) [Xenopus (Silurana) tropicalis]
 gi|444434915|dbj|BAM77032.1| ubiquitin C [Homo sapiens]
          Length = 533

 Score =  260 bits (665), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  260 bits (665), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|56753927|gb|AAW25156.1| SJCHGC00176 protein [Schistosoma japonicum]
          Length = 457

 Score =  260 bits (665), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|8394502|ref|NP_059010.1| polyubiquitin-C precursor [Rattus norvegicus]
 gi|81872124|sp|Q63429.1|UBC_RAT RecName: Full=Polyubiquitin-C; Contains: RecName: Full=Ubiquitin;
           Contains: RecName: Full=Ubiquitin-related; Flags:
           Precursor
 gi|471154|dbj|BAA04129.1| polyubiquitin [Rattus norvegicus]
          Length = 810

 Score =  260 bits (665), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  260 bits (665), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  260 bits (665), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  260 bits (665), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYNIQKESTLHLVL 679



 Score =  260 bits (665), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 319 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 379 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 436

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 437 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 496

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 497 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 556

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 616

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 617 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 676

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 677 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 736

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 737 GRTLSDYNIQKESTLHLVL 755



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 127/319 (39%), Positives = 185/319 (57%), Gaps = 9/319 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 471 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 530

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 531 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 588

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 589 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 648

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 649 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 708

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 709 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 768

Query: 294 GGKTITLDVQPYNTVQDVK 312
            GKTITL+V+P    + VK
Sbjct: 769 TGKTITLEVEPSVNTKKVK 787



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 99/244 (40%), Positives = 146/244 (59%), Gaps = 6/244 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 547 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 606

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 607 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 664

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 665 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 724

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE  +  +
Sbjct: 725 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSVNTK 784

Query: 237 DVKE 240
            VK+
Sbjct: 785 KVKQ 788


>gi|117558776|gb|AAI27396.1| Zgc:153686 [Danio rerio]
          Length = 533

 Score =  260 bits (665), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLCLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  260 bits (665), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLCLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  217 bits (553), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LCLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|195399337|ref|XP_002058277.1| GJ16000 [Drosophila virilis]
 gi|194150701|gb|EDW66385.1| GJ16000 [Drosophila virilis]
          Length = 457

 Score =  260 bits (665), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|18256864|gb|AAH21837.1| Ubc protein [Mus musculus]
          Length = 658

 Score =  260 bits (665), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  260 bits (665), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  260 bits (665), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375



 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 129/319 (40%), Positives = 186/319 (58%), Gaps = 9/319 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 319 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 379 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 436

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 437 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 496

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 497 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 556

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 616

Query: 294 GGKTITLDVQPYNTVQDVK 312
            GKTITLDV+P  T + VK
Sbjct: 617 TGKTITLDVEPSVTTKKVK 635



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 98/244 (40%), Positives = 146/244 (59%), Gaps = 6/244 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 395 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 454

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 455 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 512

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 513 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 572

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE  +  +
Sbjct: 573 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVTTK 632

Query: 237 DVKE 240
            VK+
Sbjct: 633 KVKQ 636


>gi|24657014|ref|NP_728908.1| Ubiquitin-63E, isoform A [Drosophila melanogaster]
 gi|24657019|ref|NP_523909.2| Ubiquitin-63E, isoform B [Drosophila melanogaster]
 gi|45552935|ref|NP_995994.1| Ubiquitin-63E, isoform C [Drosophila melanogaster]
 gi|442630045|ref|NP_001261383.1| Ubiquitin-63E, isoform D [Drosophila melanogaster]
 gi|302595965|sp|P0CG69.1|UBIQP_DROME RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|23092947|gb|AAF47806.3| Ubiquitin-63E, isoform A [Drosophila melanogaster]
 gi|23092948|gb|AAG22241.2| Ubiquitin-63E, isoform B [Drosophila melanogaster]
 gi|45445791|gb|AAS64964.1| Ubiquitin-63E, isoform C [Drosophila melanogaster]
 gi|440215267|gb|AGB94078.1| Ubiquitin-63E, isoform D [Drosophila melanogaster]
          Length = 763

 Score =  260 bits (665), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  260 bits (665), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  260 bits (665), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  260 bits (665), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYNIQKESTLHLVL 679



 Score =  260 bits (665), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 319 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 379 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 436

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 437 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 496

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 497 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 556

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 616

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 617 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 676

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 677 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 736

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 737 GRTLSDYNIQKESTLHLVL 755



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|2627131|dbj|BAA23487.1| polyubiquitin [Cricetulus griseus]
          Length = 886

 Score =  260 bits (665), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  260 bits (665), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  260 bits (665), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  260 bits (665), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYNIQKESTLHLVL 679



 Score =  260 bits (665), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 319 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 379 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 436

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 437 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 496

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 497 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 556

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 616

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 617 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 676

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 677 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 736

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 737 GRTLSDYNIQKESTLHLVL 755



 Score =  260 bits (665), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 395 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 454

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 455 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 512

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 513 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 572

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 573 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 632

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 633 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 692

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 693 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 752

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 753 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 812

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 813 GRTLSDYNIQKESTLHLVL 831



 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 128/319 (40%), Positives = 187/319 (58%), Gaps = 9/319 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 547 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 606

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 607 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 664

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 665 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 724

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 725 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 784

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 785 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 844

Query: 294 GGKTITLDVQPYNTVQDVK 312
            GKTITL+V+P NT++  K
Sbjct: 845 TGKTITLEVEPSNTIKKSK 863



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/244 (40%), Positives = 145/244 (59%), Gaps = 6/244 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 623 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 682

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 683 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 740

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 741 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 800

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    ++
Sbjct: 801 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSNTIK 860

Query: 237 DVKE 240
             K+
Sbjct: 861 KSKQ 864


>gi|58618886|gb|AAH89218.1| Ubc protein, partial [Rattus norvegicus]
          Length = 656

 Score =  260 bits (665), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 13  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 72

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 73  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 130

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 131 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 190

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 191 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 250

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 251 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 310

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 311 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 370

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 371 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 430

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 431 GRTLSDYNIQKESTLHLVL 449



 Score =  260 bits (665), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 89  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 148

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 149 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 206

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 207 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 266

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 267 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 326

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 327 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 386

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 387 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 446

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 447 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 506

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 507 GRTLSDYNIQKESTLHLVL 525



 Score =  260 bits (665), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 165 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 224

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 225 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 282

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 283 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 342

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 343 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 402

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 403 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 462

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 463 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 522

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 523 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 582

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 583 GRTLSDYNIQKESTLHLVL 601



 Score =  214 bits (544), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 138/375 (36%), Positives = 206/375 (54%), Gaps = 14/375 (3%)

Query: 64  LFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMN 123
           +FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++  N
Sbjct: 1   IFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYN 58

Query: 124 IKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMI 183
           I+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I
Sbjct: 59  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 118

Query: 184 YEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKE 240
           + GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +VK 
Sbjct: 119 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 178

Query: 241 IVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKT 297
            + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKT
Sbjct: 179 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 238

Query: 298 ITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLA 357
           ITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL 
Sbjct: 239 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 298

Query: 358 PSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTL 411
               +          +I+L +  S+  E  K K Q         + L+     L+D RTL
Sbjct: 299 LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 358

Query: 412 ADYGMDLSEKVVLVF 426
           +DY +     + LV 
Sbjct: 359 SDYNIQKESTLHLVL 373



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 128/319 (40%), Positives = 185/319 (57%), Gaps = 9/319 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 317 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 376

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 377 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 434

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 435 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 494

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 495 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 554

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 555 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 614

Query: 294 GGKTITLDVQPYNTVQDVK 312
            GKTITLDV+P    + VK
Sbjct: 615 TGKTITLDVEPSVNTKKVK 633



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/244 (40%), Positives = 146/244 (59%), Gaps = 6/244 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 393 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 452

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 453 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 510

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 511 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 570

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE  +  +
Sbjct: 571 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVNTK 630

Query: 237 DVKE 240
            VK+
Sbjct: 631 KVKQ 634


>gi|13879398|gb|AAH06680.1| Ubc protein [Mus musculus]
          Length = 582

 Score =  260 bits (665), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  260 bits (665), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375



 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 129/319 (40%), Positives = 186/319 (58%), Gaps = 9/319 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVK 312
            GKTITLDV+P  T + VK
Sbjct: 541 TGKTITLDVEPSVTTKKVK 559



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 98/244 (40%), Positives = 146/244 (59%), Gaps = 6/244 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 319 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 379 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 436

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 437 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 496

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE  +  +
Sbjct: 497 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVTTK 556

Query: 237 DVKE 240
            VK+
Sbjct: 557 KVKQ 560


>gi|157671923|ref|NP_062613.3| polyubiquitin-C [Mus musculus]
 gi|342187094|sp|P0CG50.2|UBC_MOUSE RecName: Full=Polyubiquitin-C; Contains: RecName: Full=Ubiquitin;
           Contains: RecName: Full=Ubiquitin-related 1; Contains:
           RecName: Full=Ubiquitin-related 2; Flags: Precursor
          Length = 734

 Score =  260 bits (665), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  260 bits (665), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  260 bits (665), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  260 bits (665), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYNIQKESTLHLVL 679



 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375



 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 129/319 (40%), Positives = 186/319 (58%), Gaps = 9/319 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 395 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 454

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 455 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 512

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 513 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 572

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 573 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 632

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 633 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 692

Query: 294 GGKTITLDVQPYNTVQDVK 312
            GKTITLDV+P  T + VK
Sbjct: 693 TGKTITLDVEPSVTTKKVK 711



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 98/244 (40%), Positives = 146/244 (59%), Gaps = 6/244 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 471 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 530

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 531 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 588

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 589 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 648

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE  +  +
Sbjct: 649 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVTTK 708

Query: 237 DVKE 240
            VK+
Sbjct: 709 KVKQ 712


>gi|302393781|sp|P62976.2|UBIQP_CRIGR RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Contains: RecName: Full=Ubiquitin-related 1; Contains:
           RecName: Full=Ubiquitin-related 2; Flags: Precursor
 gi|940395|dbj|BAA09853.1| polyubiquitin [Cricetulus sp.]
          Length = 658

 Score =  260 bits (664), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  260 bits (664), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  260 bits (664), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKQGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 128/319 (40%), Positives = 187/319 (58%), Gaps = 9/319 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 319 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 379 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 436

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 437 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 496

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 497 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 556

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 557 NVKAKIQDKQGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 616

Query: 294 GGKTITLDVQPYNTVQDVK 312
            GKTITL+V+P NT++  K
Sbjct: 617 TGKTITLEVEPSNTIKKSK 635



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/244 (40%), Positives = 145/244 (59%), Gaps = 6/244 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 395 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 454

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 455 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 512

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 513 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKQGIPPDQ 572

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    ++
Sbjct: 573 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSNTIK 632

Query: 237 DVKE 240
             K+
Sbjct: 633 KSKQ 636


>gi|38114661|gb|AAH08955.2| UBC protein, partial [Homo sapiens]
          Length = 546

 Score =  260 bits (664), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 28  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 87

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 88  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 145

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 146 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 205

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 206 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 265

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 266 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 325

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 326 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 385

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 386 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 445

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 446 GRTLSDYNIQKESTLHLVL 464



 Score =  260 bits (664), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 104 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 163

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 164 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 221

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 222 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 281

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 282 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 341

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 342 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 401

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 402 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 461

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 462 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 521

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 522 GRTLSDYNIQKESTLHLVL 540



 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 14  MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 71

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 72  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 131

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 132 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 191

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 192 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 251

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 252 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 311

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 312 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 371

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 372 TLSDYNIQKESTLHLVL 388



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/224 (35%), Positives = 119/224 (53%), Gaps = 9/224 (4%)

Query: 212 SIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASY 271
           ++QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y
Sbjct: 13  TMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 72

Query: 272 GIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSI 328
            I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q +
Sbjct: 73  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 132

Query: 329 VFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAK 388
           +FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K
Sbjct: 133 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVK 192

Query: 389 VKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
            K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 193 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 236


>gi|441630341|ref|XP_004089535.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
          Length = 590

 Score =  259 bits (663), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 72  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 131

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 132 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 189

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 190 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 249

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 250 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 309

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 310 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 369

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 370 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 429

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 430 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 489

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 490 GRTLSDYNIQKESTLHLVL 508



 Score =  259 bits (663), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 148 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 207

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 208 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 265

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 266 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 325

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 326 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 385

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 386 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 445

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 446 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 505

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 506 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 565

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 566 GRTLSDYNIQKESTLHLVL 584



 Score =  217 bits (553), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 140/381 (36%), Positives = 210/381 (55%), Gaps = 14/381 (3%)

Query: 58  NLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTA 117
           +L  M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  
Sbjct: 54  HLPTMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGR 111

Query: 118 TMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSA 177
           T++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+  
Sbjct: 112 TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 171

Query: 178 ADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIV 234
               +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    
Sbjct: 172 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 231

Query: 235 VRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVK 291
           + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVK
Sbjct: 232 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVK 291

Query: 292 TWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHST 351
           T  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK ST
Sbjct: 292 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 351

Query: 352 LHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVAL 405
           LH+VL     +          +I+L +  S+  E  K K Q         + L+     L
Sbjct: 352 LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 411

Query: 406 QDDRTLADYGMDLSEKVVLVF 426
           +D RTL+DY +     + LV 
Sbjct: 412 EDGRTLSDYNIQKESTLHLVL 432


>gi|86515356|ref|NP_001034506.1| polyubiquitin [Tribolium castaneum]
 gi|21314343|gb|AAM46898.1|AF506022_1 polyubiquitin [Tribolium castaneum]
          Length = 685

 Score =  259 bits (663), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 245/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
              I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRSIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYNIQKESTLHLVL 679



 Score =  259 bits (661), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 168/440 (38%), Positives = 247/440 (56%), Gaps = 17/440 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAAVKELLVDQV-------ALQ 406
           +VL     +          +I+L +  S+  E  K K Q   + +  DQ         L+
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK-EGIPPDQQRSIFAGKQLE 431

Query: 407 DDRTLADYGMDLSEKVVLVF 426
           D RTL+DY +     + LV 
Sbjct: 432 DGRTLSDYNIQKESTLHLVL 451



 Score =  258 bits (660), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 166/439 (37%), Positives = 245/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q   +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  217 bits (553), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|226473058|emb|CAX71215.1| ubiquitin C [Schistosoma japonicum]
          Length = 456

 Score =  259 bits (662), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 245/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLLGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q + FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLTFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 142/381 (37%), Positives = 212/381 (55%), Gaps = 22/381 (5%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFI----DPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVAL 405
           L    R++    IF+      +I+L +  S+  E  K K Q         + L      L
Sbjct: 299 L----RLLGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLTFAGKQL 354

Query: 406 QDDRTLADYGMDLSEKVVLVF 426
           +D RTL+DY +     + LV 
Sbjct: 355 EDGRTLSDYNIQKESTLHLVL 375


>gi|426247174|ref|XP_004017361.1| PREDICTED: polyubiquitin-C-like isoform 1 [Ovis aries]
          Length = 462

 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 166/439 (37%), Positives = 245/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKVKIQEKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  252 bits (643), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 151/373 (40%), Positives = 221/373 (59%), Gaps = 9/373 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELP 366
           +VL     ++  P
Sbjct: 449 LVLRLRGGVLSSP 461



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKVKIQEKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|1304128|dbj|BAA09860.1| polyubiquitin [Homo sapiens]
          Length = 611

 Score =  258 bits (660), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 245/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L    S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEGEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  258 bits (660), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 166/439 (37%), Positives = 245/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LE E    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEGEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  217 bits (553), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|196016942|ref|XP_002118320.1| hypothetical protein TRIADDRAFT_64418 [Trichoplax adhaerens]
 gi|190579096|gb|EDV19200.1| hypothetical protein TRIADDRAFT_64418 [Trichoplax adhaerens]
          Length = 457

 Score =  258 bits (659), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 247/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 138/377 (36%), Positives = 209/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|401412470|ref|XP_003885682.1| Ubiquitin, related [Neospora caninum Liverpool]
 gi|325120102|emb|CBZ55656.1| Ubiquitin, related [Neospora caninum Liverpool]
          Length = 535

 Score =  258 bits (658), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 245/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ +  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-DVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITLDV+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  258 bits (658), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 245/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ +  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-DVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITLDV+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  214 bits (546), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 137/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-DVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITLDV+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|444434925|dbj|BAM77037.1| ubiquitin C [Homo sapiens]
          Length = 685

 Score =  257 bits (657), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 166/439 (37%), Positives = 245/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D     FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYSIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVELSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ   ++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  +I+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYSIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE+   + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVELSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  256 bits (653), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 166/439 (37%), Positives = 245/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVELSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYNIQKESTLHLVL 679



 Score =  254 bits (648), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 166/439 (37%), Positives = 243/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
              I+ GK+LED +TL+ Y ++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRSIFAGKQLEDGRTLSDYSIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVELSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 138/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q   +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYSIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L + +S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVELSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|390334818|ref|XP_003724023.1| PREDICTED: uncharacterized protein LOC754856 [Strongylocentrotus
           purpuratus]
          Length = 1673

 Score =  257 bits (657), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 247/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  +++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S +I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +++++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  257 bits (657), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 247/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  +++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S +I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +++++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  257 bits (657), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 247/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  +++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S +I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +++++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYNIQKESTLHLVL 679



 Score =  257 bits (657), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 247/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 319 LEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  +++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 379 GGMQIFVKTLTGKTITL-EVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 436

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S +I +VKA +    G+    
Sbjct: 437 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQ 496

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 497 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIE 556

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 616

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +++++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 617 TGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 676

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 677 LVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLED 736

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 737 GRTLSDYNIQKESTLHLVL 755



 Score =  257 bits (657), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 247/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 395 LEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 454

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  +++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 455 GGMQIFVKTLTGKTITL-EVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 512

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S +I +VKA +    G+    
Sbjct: 513 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQ 572

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 573 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIE 632

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 633 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 692

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +++++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 693 TGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 752

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 753 LVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLED 812

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 813 GRTLSDYNIQKESTLHLVL 831



 Score =  257 bits (657), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 247/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 471 LEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 530

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  +++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 531 GGMQIFVKTLTGKTITL-EVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 588

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S +I +VKA +    G+    
Sbjct: 589 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQ 648

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 649 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIE 708

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 709 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 768

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +++++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 769 TGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 828

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 829 LVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLED 888

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 889 GRTLSDYNIQKESTLHLVL 907



 Score =  257 bits (657), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 247/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 547 LEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 606

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  +++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 607 GGMQIFVKTLTGKTITL-EVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 664

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S +I +VKA +    G+    
Sbjct: 665 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQ 724

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 725 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIE 784

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 785 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 844

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +++++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 845 TGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 904

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 905 LVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLED 964

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 965 GRTLSDYNIQKESTLHLVL 983



 Score =  257 bits (657), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 247/439 (56%), Gaps = 15/439 (3%)

Query: 1    MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
            ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 623  LEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 682

Query: 60   SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
              M++FVK  T +T T+ E  P  +++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 683  GGMQIFVKTLTGKTITL-EVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 740

Query: 120  TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
            +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S +I +VKA +    G+    
Sbjct: 741  SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQ 800

Query: 180  HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
              +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 801  QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIE 860

Query: 237  DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
            +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 861  NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 920

Query: 294  GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
             GKTITL+V+P +++++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 921  TGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 980

Query: 354  MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
            +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 981  LVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLED 1040

Query: 408  DRTLADYGMDLSEKVVLVF 426
             RTL+DY +     + LV 
Sbjct: 1041 GRTLSDYNIQKESTLHLVL 1059



 Score =  257 bits (657), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 247/439 (56%), Gaps = 15/439 (3%)

Query: 1    MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
            ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 699  LEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 758

Query: 60   SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
              M++FVK  T +T T+ E  P  +++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 759  GGMQIFVKTLTGKTITL-EVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 816

Query: 120  TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
            +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S +I +VKA +    G+    
Sbjct: 817  SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQ 876

Query: 180  HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
              +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 877  QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIE 936

Query: 237  DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
            +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 937  NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 996

Query: 294  GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
             GKTITL+V+P +++++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 997  TGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 1056

Query: 354  MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
            +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 1057 LVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLED 1116

Query: 408  DRTLADYGMDLSEKVVLVF 426
             RTL+DY +     + LV 
Sbjct: 1117 GRTLSDYNIQKESTLHLVL 1135



 Score =  257 bits (657), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 247/439 (56%), Gaps = 15/439 (3%)

Query: 1    MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
            ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 775  LEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 834

Query: 60   SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
              M++FVK  T +T T+ E  P  +++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 835  GGMQIFVKTLTGKTITL-EVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 892

Query: 120  TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
            +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S +I +VKA +    G+    
Sbjct: 893  SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQ 952

Query: 180  HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
              +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 953  QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIE 1012

Query: 237  DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
            +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 1013 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 1072

Query: 294  GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
             GKTITL+V+P +++++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 1073 TGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 1132

Query: 354  MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
            +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 1133 LVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLED 1192

Query: 408  DRTLADYGMDLSEKVVLVF 426
             RTL+DY +     + LV 
Sbjct: 1193 GRTLSDYNIQKESTLHLVL 1211



 Score =  257 bits (657), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 247/439 (56%), Gaps = 15/439 (3%)

Query: 1    MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
            ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 851  LEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 910

Query: 60   SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
              M++FVK  T +T T+ E  P  +++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 911  GGMQIFVKTLTGKTITL-EVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 968

Query: 120  TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
            +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S +I +VKA +    G+    
Sbjct: 969  SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQ 1028

Query: 180  HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
              +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 1029 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIE 1088

Query: 237  DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
            +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 1089 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 1148

Query: 294  GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
             GKTITL+V+P +++++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 1149 TGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 1208

Query: 354  MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
            +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 1209 LVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLED 1268

Query: 408  DRTLADYGMDLSEKVVLVF 426
             RTL+DY +     + LV 
Sbjct: 1269 GRTLSDYNIQKESTLHLVL 1287



 Score =  257 bits (657), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 247/439 (56%), Gaps = 15/439 (3%)

Query: 1    MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
            ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 927  LEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 986

Query: 60   SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
              M++FVK  T +T T+ E  P  +++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 987  GGMQIFVKTLTGKTITL-EVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 1044

Query: 120  TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
            +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S +I +VKA +    G+    
Sbjct: 1045 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQ 1104

Query: 180  HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
              +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 1105 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIE 1164

Query: 237  DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
            +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 1165 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 1224

Query: 294  GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
             GKTITL+V+P +++++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 1225 TGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 1284

Query: 354  MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
            +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 1285 LVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLED 1344

Query: 408  DRTLADYGMDLSEKVVLVF 426
             RTL+DY +     + LV 
Sbjct: 1345 GRTLSDYNIQKESTLHLVL 1363



 Score =  257 bits (657), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 247/439 (56%), Gaps = 15/439 (3%)

Query: 1    MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
            ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 1003 LEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 1062

Query: 60   SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
              M++FVK  T +T T+ E  P  +++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 1063 GGMQIFVKTLTGKTITL-EVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 1120

Query: 120  TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
            +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S +I +VKA +    G+    
Sbjct: 1121 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQ 1180

Query: 180  HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
              +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 1181 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIE 1240

Query: 237  DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
            +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 1241 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 1300

Query: 294  GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
             GKTITL+V+P +++++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 1301 TGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 1360

Query: 354  MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
            +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 1361 LVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLED 1420

Query: 408  DRTLADYGMDLSEKVVLVF 426
             RTL+DY +     + LV 
Sbjct: 1421 GRTLSDYNIQKESTLHLVL 1439



 Score =  257 bits (657), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 247/439 (56%), Gaps = 15/439 (3%)

Query: 1    MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
            ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 1079 LEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 1138

Query: 60   SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
              M++FVK  T +T T+ E  P  +++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 1139 GGMQIFVKTLTGKTITL-EVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 1196

Query: 120  TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
            +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S +I +VKA +    G+    
Sbjct: 1197 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQ 1256

Query: 180  HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
              +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 1257 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIE 1316

Query: 237  DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
            +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 1317 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 1376

Query: 294  GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
             GKTITL+V+P +++++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 1377 TGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 1436

Query: 354  MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
            +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 1437 LVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLED 1496

Query: 408  DRTLADYGMDLSEKVVLVF 426
             RTL+DY +     + LV 
Sbjct: 1497 GRTLSDYNIQKESTLHLVL 1515



 Score =  257 bits (657), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 247/439 (56%), Gaps = 15/439 (3%)

Query: 1    MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
            ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 1155 LEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 1214

Query: 60   SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
              M++FVK  T +T T+ E  P  +++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 1215 GGMQIFVKTLTGKTITL-EVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 1272

Query: 120  TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
            +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S +I +VKA +    G+    
Sbjct: 1273 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQ 1332

Query: 180  HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
              +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 1333 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIE 1392

Query: 237  DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
            +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 1393 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 1452

Query: 294  GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
             GKTITL+V+P +++++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 1453 TGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 1512

Query: 354  MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
            +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 1513 LVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLED 1572

Query: 408  DRTLADYGMDLSEKVVLVF 426
             RTL+DY +     + LV 
Sbjct: 1573 GRTLSDYNIQKESTLHLVL 1591



 Score =  257 bits (657), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 247/439 (56%), Gaps = 15/439 (3%)

Query: 1    MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
            ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 1231 LEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 1290

Query: 60   SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
              M++FVK  T +T T+ E  P  +++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 1291 GGMQIFVKTLTGKTITL-EVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 1348

Query: 120  TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
            +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S +I +VKA +    G+    
Sbjct: 1349 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQ 1408

Query: 180  HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
              +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 1409 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIE 1468

Query: 237  DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
            +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 1469 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 1528

Query: 294  GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
             GKTITL+V+P +++++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 1529 TGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 1588

Query: 354  MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
            +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 1589 LVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLED 1648

Query: 408  DRTLADYGMDLSEKVVLVF 426
             RTL+DY +     + LV 
Sbjct: 1649 GRTLSDYNIQKESTLHLVL 1667



 Score =  252 bits (643), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 163/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+   T  F +   
Sbjct: 15  LEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKXQTFLFFYSLQ 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  +++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  VNMQIFVKTLTGKTITL-EVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S +I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +++++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 132/377 (35%), Positives = 204/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  +++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+        +  +  + IFVK  TG+ + LEV+ S +I +VKA +    G+      
Sbjct: 59  YNIQKXQTFLFFYSLQVNMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +++++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|384252612|gb|EIE26088.1| hexaubiquitin protein [Coccomyxa subellipsoidea C-169]
          Length = 457

 Score =  257 bits (656), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 433 GRTLADYNIQKESTLHLVL 451



 Score =  214 bits (545), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 206/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K+ IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|25151716|ref|NP_741157.1| Protein UBQ-1, isoform a [Caenorhabditis elegans]
 gi|302595957|sp|P0CG71.1|UBIQ1_CAEEL RecName: Full=Polyubiquitin-A; Contains: RecName: Full=Ubiquitin;
           Contains: RecName: Full=Ubiquitin-related; Flags:
           Precursor
 gi|373219552|emb|CCD68779.1| Protein UBQ-1, isoform a [Caenorhabditis elegans]
          Length = 838

 Score =  257 bits (656), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 166/439 (37%), Positives = 245/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +       I  +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  257 bits (656), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 166/439 (37%), Positives = 245/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T I + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLIGKTITLEVEASDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  255 bits (651), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 395 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 454

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 455 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 512

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 513 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 572

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 573 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 632

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 633 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 692

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 693 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 752

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 753 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 812

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 813 GRTLSDYNIQKESTLHLVL 831



 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 164/439 (37%), Positives = 243/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK   G+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYNIQKESTLHLVL 679



 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 164/439 (37%), Positives = 243/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 319 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK    +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 379 GGMQIFVKTLIGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 436

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 437 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 496

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 497 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 556

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 616

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 617 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 676

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 677 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 736

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 737 GRTLSDYNIQKESTLHLVL 755



 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 137/377 (36%), Positives = 206/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|32564339|ref|NP_741158.2| Protein UBQ-1, isoform c [Caenorhabditis elegans]
 gi|373219553|emb|CCD68780.1| Protein UBQ-1, isoform c [Caenorhabditis elegans]
          Length = 538

 Score =  256 bits (655), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 166/439 (37%), Positives = 245/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +       I  +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 155/399 (38%), Positives = 228/399 (57%), Gaps = 9/399 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 IGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ 392
           +VL     +          +I+L +  S+  E  K K Q
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQ 487



 Score =  218 bits (554), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 135/339 (39%), Positives = 199/339 (58%), Gaps = 9/339 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T I + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLIGKTITLEVEASDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAG 332
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAG
Sbjct: 465 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503



 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 137/377 (36%), Positives = 206/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|294885539|ref|XP_002771351.1| polyubiquitin, putative [Perkinsus marinus ATCC 50983]
 gi|239874907|gb|EER03167.1| polyubiquitin, putative [Perkinsus marinus ATCC 50983]
          Length = 458

 Score =  256 bits (653), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 167/440 (37%), Positives = 246/440 (55%), Gaps = 17/440 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
             M++FVK  T +T T+ VEA    T++N+K  IQ KEGI  DQ  L++ GK L ED  T
Sbjct: 75  GGMQIFVKTLTGKTITLDVEA--SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 131

Query: 119 MTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAA 178
           ++  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+   
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPD 191

Query: 179 DHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVV 235
              +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    +
Sbjct: 192 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTI 251

Query: 236 RDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKT 292
            +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT
Sbjct: 252 ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKT 311

Query: 293 WGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTL 352
             GKTITLDV+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STL
Sbjct: 312 LTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 371

Query: 353 HMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQ 406
           H+VL     +        D +I+L +  S+  E  K K Q         + L+     L+
Sbjct: 372 HLVLRLRGGMQIFVKTLTDKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 431

Query: 407 DDRTLADYGMDLSEKVVLVF 426
           D RTL+DY +     + LV 
Sbjct: 432 DGRTLSDYNIQKESTLHLVL 451



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 138/378 (36%), Positives = 208/378 (55%), Gaps = 16/378 (4%)

Query: 62  MKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMT 120
           M++FVK  T +T T+ VEA    T++N+K  IQ KEGI  DQ  L++ GK L ED  T++
Sbjct: 1   MQIFVKTLTGKTITLDVEA--SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLS 57

Query: 121 SMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADH 180
             NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+     
Sbjct: 58  DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQ 117

Query: 181 IMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRD 237
            +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + +
Sbjct: 118 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIEN 177

Query: 238 VKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWG 294
           VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  
Sbjct: 178 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLT 237

Query: 295 GKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHM 354
           GKTITLDV+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+
Sbjct: 238 GKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297

Query: 355 VLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDD 408
           VL     +          +I+L +  S+  E  K K Q         + L+     L+D 
Sbjct: 298 VLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 357

Query: 409 RTLADYGMDLSEKVVLVF 426
           RTL+DY +     + LV 
Sbjct: 358 RTLSDYNIQKESTLHLVL 375


>gi|147834511|emb|CAN71997.1| hypothetical protein VITISV_004025 [Vitis vinifera]
          Length = 538

 Score =  256 bits (653), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 169/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           +KV+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+ +STLH + +  
Sbjct: 15  LKVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKDSTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T  N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTRKTITL-EVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 433 GRTLADYNIQKESTLHLVL 451



 Score =  250 bits (639), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 164/427 (38%), Positives = 234/427 (54%), Gaps = 15/427 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+   N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 389 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADY 414
            RTL DY
Sbjct: 509 GRTLVDY 515



 Score =  242 bits (617), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 149/363 (41%), Positives = 211/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L  YNIQK STLH
Sbjct: 465 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLVDYNIQKESTLH 524

Query: 354 MVL 356
           ++L
Sbjct: 525 LIL 527



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 138/378 (36%), Positives = 203/378 (53%), Gaps = 16/378 (4%)

Query: 62  MKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMT 120
           M++FVK  T +T T+ VE+    T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+ 
Sbjct: 1   MQIFVKTLTGKTITLKVES--SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLA 57

Query: 121 SMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADH 180
             NI+ +S +HLV   +  + IFVK  T + + LEV+ S    +VKA +    G+     
Sbjct: 58  DYNIQKDSTLHLVLRLRGGMQIFVKTLTRKTITLEVESSDTTDNVKAKIQDKEGIPPDQQ 117

Query: 181 IMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRD 237
            +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +
Sbjct: 118 RLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDN 177

Query: 238 VKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWG 294
           VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  
Sbjct: 178 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLT 237

Query: 295 GKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHM 354
           GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+
Sbjct: 238 GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297

Query: 355 VLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDD 408
           VL     +          +I+L +  S+  +  K K Q         + L+     L+D 
Sbjct: 298 VLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDG 357

Query: 409 RTLADYGMDLSEKVVLVF 426
           RTLADY +     + LV 
Sbjct: 358 RTLADYNIQKESTLHLVL 375


>gi|312160|emb|CAA51679.1| ubiquitin [Solanum lycopersicum]
          Length = 534

 Score =  255 bits (652), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTRKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 433 GRTLADYNIQKESTLHLVL 451



 Score =  251 bits (641), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 239/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  T + + LEV+ S  I +VKA +    G+    
Sbjct: 209 ADYNIQKESTLHLVLRLRGGMQIFVKTLTRKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 389 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 509 GRTLADYNIQKESTLHLVL 527



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/299 (35%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTRKT 240

Query: 374 ISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299


>gi|66510555|ref|XP_393173.2| PREDICTED: polyubiquitin-A-like isoform 1 [Apis mellifera]
 gi|328780726|ref|XP_003249849.1| PREDICTED: polyubiquitin-A-like [Apis mellifera]
          Length = 761

 Score =  255 bits (652), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEASDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKTKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  255 bits (652), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKTKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVEASDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYNIQKESTLHLVL 679



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  253 bits (647), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 164/439 (37%), Positives = 243/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 319 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 379 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 436

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 437 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKTKIQDKEGIPPDQ 496

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 497 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 556

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 557 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 616

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 617 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 676

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 677 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 736

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 737 GRTLSDYNIQKESTLHLVL 755



 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 137/377 (36%), Positives = 206/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|112983984|ref|NP_001036839.1| polyubiquitin [Bombyx mori]
 gi|4587236|dbj|BAA76676.1| polyubiquitin [Bombyx mori]
          Length = 913

 Score =  255 bits (652), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 319 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 379 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 436

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 437 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 496

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 497 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 556

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLENGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 616

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 617 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 676

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 677 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 736

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 737 GRTLSDYNIQKESTLHLVL 755



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 164/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L++
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEN 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 164/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 395 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 454

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 455 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 512

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 513 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 572

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LE+ +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 573 QRLIFAGKQLENGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 632

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 633 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 692

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 693 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 752

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 753 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 812

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 813 GRTLSDYNIQKESTLHLVL 831



 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 164/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 471 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 530

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L E+  T+
Sbjct: 531 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-ENGRTL 588

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 589 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 648

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 649 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 708

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 709 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 768

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 769 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 828

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 829 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 888

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 889 GRTLSDYNIQKESTLHLVL 907



 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 138/377 (36%), Positives = 207/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|156482|gb|AAA28154.1| polyubiquitin [Caenorhabditis elegans]
          Length = 838

 Score =  255 bits (652), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 395 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 454

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 455 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 512

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 513 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 572

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 573 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 632

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 633 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 692

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 693 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 752

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 753 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 812

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 813 GRTLSDYNIQKQSTLHLVL 831



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYNIQKESTLHLVL 679



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 319 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 379 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 436

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 437 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 496

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 497 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 556

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 616

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 617 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 676

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 677 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 736

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 737 GRTLSDYNIQKESTLHLVL 755



 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 137/377 (36%), Positives = 206/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|1332579|emb|CAA66667.1| polyubiquitin [Pinus sylvestris]
          Length = 761

 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 241/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 541 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 661 GRTLADYNIQKESTLHLVL 679



 Score =  254 bits (649), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 241/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVENSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 433 GRTLADYNIQKESTLHLVL 451



 Score =  254 bits (648), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVENSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 389 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 509 GRTLADYNIQKESTLHLVL 527



 Score =  253 bits (647), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 285 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 465 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 585 GRTLADYNIQKESTLHLVL 603



 Score =  253 bits (646), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 319 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 378

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 379 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 436

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 437 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 496

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 497 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 556

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 616

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 617 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 676

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 677 LVLRLRGGMQIFVKTLTAKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 736

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 737 GRTLADYNIQKESTLHLVL 755



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 204/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV++S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVENSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|156552611|ref|XP_001599434.1| PREDICTED: polyubiquitin-A-like isoform 1 [Nasonia vitripennis]
 gi|345487600|ref|XP_003425726.1| PREDICTED: polyubiquitin-A-like isoform 2 [Nasonia vitripennis]
          Length = 913

 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYNIQKESTLHLVL 679



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 319 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 379 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 436

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 437 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 496

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 497 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 556

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 616

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 617 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 676

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 677 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 736

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 737 GRTLSDYNIQKESTLHLVL 755



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 395 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 454

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 455 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 512

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 513 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 572

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 573 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 632

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 633 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 692

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 693 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 752

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 753 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 812

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 813 GRTLSDYNIQKESTLHLVL 831



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 471 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 530

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 531 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 588

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 589 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 648

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 649 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 708

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 709 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 768

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 769 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 828

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 829 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 888

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 889 GRTLSDYNIQKESTLHLVL 907



 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 137/377 (36%), Positives = 206/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|350416822|ref|XP_003491120.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-A-like [Bombus
           impatiens]
          Length = 611

 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  254 bits (650), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 165/441 (37%), Positives = 244/441 (55%), Gaps = 17/441 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA--------VKELLVDQVAL 405
           +VL     +          +I+L +  S+  E  K K Q           + L+     L
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPRSPDQQRLIFAGKQL 508

Query: 406 QDDRTLADYGMDLSEKVVLVF 426
           +D RTL+DY +     + LV 
Sbjct: 509 EDGRTLSDYNIQKESTLHLVL 529



 Score =  251 bits (640), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 165/441 (37%), Positives = 244/441 (55%), Gaps = 17/441 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLH--LQSIVFAGKRLFENHVLARYNIQKHST 351
            GKTITL+V+  +T+++VK K+ DK   P     Q ++FAGK+L +   L+ YNIQK ST
Sbjct: 465 TGKTITLEVEASDTIENVKAKIQDKEGIPRSPDQQRLIFAGKQLEDGRTLSDYNIQKEST 524

Query: 352 LHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVAL 405
           LH+VL     +          +I+L +  S+  E  K K Q         + L+     L
Sbjct: 525 LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 584

Query: 406 QDDRTLADYGMDLSEKVVLVF 426
           +D RTL+DY +     + LV 
Sbjct: 585 EDGRTLSDYNIQKESTLHLVL 605



 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 137/377 (36%), Positives = 206/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|328780728|ref|XP_003249850.1| PREDICTED: polyubiquitin-A-like [Apis mellifera]
          Length = 685

 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEASDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKTKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKTKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEASDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 164/439 (37%), Positives = 243/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKTKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYNIQKESTLHLVL 679



 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 137/377 (36%), Positives = 206/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|302393783|sp|P59669.2|UBIQP_GEOCY RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Contains: RecName: Full=Ubiquitin-related; Flags:
           Precursor
 gi|11154|emb|CAA50268.1| ubiquitin [Geodia cydonium]
          Length = 457

 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVVRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 102/287 (35%), Positives = 155/287 (54%), Gaps = 12/287 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADY 414
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY
Sbjct: 241 ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 287



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 78/223 (34%), Positives = 117/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 180

Query: 390 KFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223


>gi|307206691|gb|EFN84646.1| Ubiquitin [Harpegnathos saltator]
          Length = 686

 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYNIQKESTLHLVL 679



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 137/377 (36%), Positives = 206/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|268571891|ref|XP_002641176.1| C. briggsae CBR-UBQ-1 protein [Caenorhabditis briggsae]
          Length = 762

 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYNIQKESTLHLVL 679



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 319 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 379 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 436

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 437 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 496

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 497 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 556

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 616

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 617 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 676

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 677 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 736

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 737 GRTLSDYNIQKESTLHLVL 755



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 137/377 (36%), Positives = 206/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|242021992|ref|XP_002431426.1| ubiquitin, putative [Pediculus humanus corporis]
 gi|212516707|gb|EEB18688.1| ubiquitin, putative [Pediculus humanus corporis]
          Length = 844

 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  254 bits (650), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 165/440 (37%), Positives = 245/440 (55%), Gaps = 16/440 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKN----NYVLDVLPSPFQIFVKT 292
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+     + VL +     QIFVKT
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGKMQIFVKT 464

Query: 293 WGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTL 352
             GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STL
Sbjct: 465 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 524

Query: 353 HMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQ 406
           H+VL     +          +I+L +  S+  E  K K Q         + L+     L+
Sbjct: 525 HLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 584

Query: 407 DDRTLADYGMDLSEKVVLVF 426
           D RTL+DY +     + LV 
Sbjct: 585 DGRTLSDYNIQKESTLHLVL 604



 Score =  254 bits (650), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 165/440 (37%), Positives = 245/440 (55%), Gaps = 16/440 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDEC----LLEMFPSSIQIFVRTPIEEIVRLEVEVLIVV 235
             +I+ GK+LED +TL+ Y+++ E     +L +    +QIFV+T   + + LEVE    +
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGKMQIFVKTLTGKTITLEVEASDTI 480

Query: 236 RDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKT 292
            +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT
Sbjct: 481 ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKT 540

Query: 293 WGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTL 352
             GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STL
Sbjct: 541 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 600

Query: 353 HMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQ 406
           H+VL     +          +I+L +  S+  E  K K Q         + L+     L+
Sbjct: 601 HLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 660

Query: 407 DDRTLADYGMDLSEKVVLVF 426
           D RTL+DY +     + LV 
Sbjct: 661 DGRTLSDYNIQKESTLHLVL 680



 Score =  254 bits (648), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 166/440 (37%), Positives = 244/440 (55%), Gaps = 16/440 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHF-LHQN 58
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH  L   
Sbjct: 395 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 454

Query: 59  LSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
             +M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T
Sbjct: 455 GGKMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 512

Query: 119 MTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAA 178
           ++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+   
Sbjct: 513 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPD 572

Query: 179 DHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVV 235
              +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    +
Sbjct: 573 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTI 632

Query: 236 RDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKT 292
            +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT
Sbjct: 633 ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKT 692

Query: 293 WGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTL 352
             GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STL
Sbjct: 693 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 752

Query: 353 HMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQ 406
           H+VL     +          +I+L +  S+  E  K K Q         + L+     L+
Sbjct: 753 HLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 812

Query: 407 DDRTLADYGMDLSEKVVLVF 426
           D RTL+DY +     + LV 
Sbjct: 813 DGRTLSDYNIQKESTLHLVL 832



 Score =  251 bits (640), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 165/440 (37%), Positives = 244/440 (55%), Gaps = 16/440 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 319 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 379 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 436

Query: 120 TSMNIKSESIIHLVFCPKE-ILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAA 178
           +  NI+ ES +HLV   +   + IFVK  TG+ + LEV+ S  I +VKA +    G+   
Sbjct: 437 SDYNIQKESTLHLVLRLRGGKMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPD 496

Query: 179 DHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVV 235
              +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    +
Sbjct: 497 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTI 556

Query: 236 RDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKT 292
            +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT
Sbjct: 557 ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKT 616

Query: 293 WGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTL 352
             GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STL
Sbjct: 617 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 676

Query: 353 HMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQ 406
           H+VL     +          +I+L +  S+  E  K K Q         + L+     L+
Sbjct: 677 HLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 736

Query: 407 DDRTLADYGMDLSEKVVLVF 426
           D RTL+DY +     + LV 
Sbjct: 737 DGRTLSDYNIQKESTLHLVL 756



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 137/377 (36%), Positives = 206/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|229577230|ref|NP_001153331.1| ubiquitin C-like [Nasonia vitripennis]
          Length = 610

 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 137/377 (36%), Positives = 206/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|195435796|ref|XP_002065865.1| GK20481 [Drosophila willistoni]
 gi|194161950|gb|EDW76851.1| GK20481 [Drosophila willistoni]
          Length = 611

 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 137/377 (36%), Positives = 206/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|308497342|ref|XP_003110858.1| CRE-UBQ-1 protein [Caenorhabditis remanei]
 gi|308242738|gb|EFO86690.1| CRE-UBQ-1 protein [Caenorhabditis remanei]
          Length = 920

 Score =  255 bits (651), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  255 bits (651), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  252 bits (644), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 165/445 (37%), Positives = 247/445 (55%), Gaps = 21/445 (4%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ-----AAVKELLV-------D 401
           +VL     +          +I+L +  S+  E  K K Q        ++ L+       +
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKNNCE 584

Query: 402 QVALQDDRTLADYGMDLSEKVVLVF 426
           +  L+D RTL+DY +     + LV 
Sbjct: 585 RKQLEDGRTLSDYNIQKESTLHLVL 609



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 164/444 (36%), Positives = 243/444 (54%), Gaps = 19/444 (4%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 471 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 530

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGK-----LLKE 114
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK        E
Sbjct: 531 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKNNCERKQLE 589

Query: 115 DTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVG 174
           D  T++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G
Sbjct: 590 DGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG 649

Query: 175 VSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEV 231
           +      +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE 
Sbjct: 650 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEA 709

Query: 232 LIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQI 288
              + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QI
Sbjct: 710 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 769

Query: 289 FVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQK 348
           FVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK
Sbjct: 770 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 829

Query: 349 HSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQ 402
            STLH+VL     +          +I+L +  S+  E  K K Q         + L+   
Sbjct: 830 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 889

Query: 403 VALQDDRTLADYGMDLSEKVVLVF 426
             L+D RTL+DY +     + LV 
Sbjct: 890 KQLEDGRTLSDYNIQKESTLHLVL 913



 Score =  248 bits (634), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 165/445 (37%), Positives = 244/445 (54%), Gaps = 21/445 (4%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 319 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 379 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 436

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 437 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 496

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 497 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 556

Query: 237 DVKEIVANIIDLSLGNQDLFYAGT------KLEACKTLASYGIKNNYVLDV---LPSPFQ 287
           +VK  + +   +    Q L +AG       +LE  +TL+ Y I+    L +   L    Q
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKNNCERKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 616

Query: 288 IFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQ 347
           IFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQ
Sbjct: 617 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 676

Query: 348 KHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVD 401
           K STLH+VL     +          +I+L +  S+  E  K K Q         + L+  
Sbjct: 677 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 736

Query: 402 QVALQDDRTLADYGMDLSEKVVLVF 426
              L+D RTL+DY +     + LV 
Sbjct: 737 GKQLEDGRTLSDYNIQKESTLHLVL 761



 Score =  248 bits (634), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 165/445 (37%), Positives = 244/445 (54%), Gaps = 21/445 (4%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 395 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 454

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 455 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 512

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 513 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 572

Query: 180 HIMIYEGK------KLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVE 230
             +I+ GK      +LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE
Sbjct: 573 QRLIFAGKNNCERKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 632

Query: 231 VLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQ 287
               + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    Q
Sbjct: 633 ASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 692

Query: 288 IFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQ 347
           IFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQ
Sbjct: 693 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 752

Query: 348 KHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVD 401
           K STLH+VL     +          +I+L +  S+  E  K K Q         + L+  
Sbjct: 753 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 812

Query: 402 QVALQDDRTLADYGMDLSEKVVLVF 426
              L+D RTL+DY +     + LV 
Sbjct: 813 GKQLEDGRTLSDYNIQKESTLHLVL 837



 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 137/377 (36%), Positives = 206/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|324509924|gb|ADY44155.1| Polyubiquitin-A, partial [Ascaris suum]
          Length = 626

 Score =  255 bits (651), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 32  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 91

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 92  GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 149

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 150 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 209

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 210 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 269

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 270 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 329

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 330 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 389

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 390 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 449

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 450 GRTLSDYNIQKESTLHLVL 468



 Score =  255 bits (651), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 108 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 167

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 168 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 225

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 226 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 285

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 286 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 345

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 346 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 405

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 406 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 465

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 466 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 525

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 526 GRTLSDYNIQKESTLHLVL 544



 Score =  255 bits (651), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 184 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 243

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 244 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 301

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 302 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 361

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 362 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 421

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 422 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 481

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 482 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 541

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 542 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 601

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 602 GRTLSDYNIQKESTLHLVL 620



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 137/377 (36%), Positives = 206/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 18  MQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 75

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 76  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 135

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 136 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 195

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 196 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 255

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 256 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 315

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 316 LRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 375

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 376 TLSDYNIQKESTLHLVL 392



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/224 (35%), Positives = 118/224 (52%), Gaps = 9/224 (4%)

Query: 212 SIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASY 271
           S+QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y
Sbjct: 17  SMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 76

Query: 272 GIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSI 328
            I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q +
Sbjct: 77  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 136

Query: 329 VFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAK 388
           +FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K
Sbjct: 137 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 196

Query: 389 VKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
            K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 197 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 240


>gi|332023427|gb|EGI63670.1| Ubiquitin [Acromyrmex echinatior]
          Length = 534

 Score =  255 bits (651), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  255 bits (651), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 137/377 (36%), Positives = 206/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|307172602|gb|EFN63961.1| Ubiquitin [Camponotus floridanus]
          Length = 459

 Score =  255 bits (651), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 137/377 (36%), Positives = 206/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|356519611|ref|XP_003528465.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-like [Glycine max]
          Length = 776

 Score =  255 bits (651), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 168/425 (39%), Positives = 238/425 (56%), Gaps = 15/425 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 465 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAAV----KELLVDQVALQDDR 409
           +VL     +          +I+L +    VK  AKV+ +  +    + L+     LQD R
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVESXNVK--AKVQDKEGIPPDQQRLIFAGKQLQDGR 582

Query: 410 TLADY 414
           TLADY
Sbjct: 583 TLADY 587



 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 433 GRTLADYNIQKESTLHLVL 451



 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 389 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 509 GRTLADYNIQKESTLHLVL 527



 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 142/362 (39%), Positives = 205/362 (56%), Gaps = 12/362 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 395 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 454

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 455 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 512

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+      +VKA V    G+    
Sbjct: 513 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESX----NVKAKVQDKEGIPPDQ 568

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+L+D +TLA Y++     L +       +QIFV+T I + + LEVE    + 
Sbjct: 569 QRLIFAGKQLQDGRTLADYNILKXSTLHLVLRLCGGMQIFVKTLIGKTITLEVESSDTID 628

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNN--YVLDVLPSPFQIFVKTWG 294
           +VK  + +   +    Q L +AG +LE   TLA Y I  +  +++  L    QIFVKT  
Sbjct: 629 NVKAKIQDKESIPPDQQRLIFAGKQLEDGLTLADYNIXESTLHLVLRLRGGMQIFVKTLI 688

Query: 295 GKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHM 354
           GK++TL+V+  +T+ +VK K  DK       + ++FAGK+L +   LA  NI K STLH+
Sbjct: 689 GKSVTLEVESSDTIDNVKAKFQDKEGILPDQRRLIFAGKQLEDGRTLADXNILKESTLHL 748

Query: 355 VL 356
           VL
Sbjct: 749 VL 750



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|62083359|gb|AAX62404.1| polyubiquitin [Lysiphlebus testaceipes]
          Length = 538

 Score =  255 bits (651), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  253 bits (646), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 164/439 (37%), Positives = 243/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L F G +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFVGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  211 bits (536), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 137/377 (36%), Positives = 206/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFVGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|332021030|gb|EGI61419.1| Ubiquitin [Acromyrmex echinatior]
          Length = 459

 Score =  255 bits (651), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 137/377 (36%), Positives = 206/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|341879718|gb|EGT35653.1| hypothetical protein CAEBREN_32771 [Caenorhabditis brenneri]
          Length = 970

 Score =  255 bits (651), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 71  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 130

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 131 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 188

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 189 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 248

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 249 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 308

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 309 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 368

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 369 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 428

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 429 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 488

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 489 GRTLSDYNIQKESTLHLVL 507



 Score =  255 bits (651), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 147 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 206

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 207 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 264

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 265 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 324

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 325 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 384

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 385 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 444

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 445 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 504

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 505 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 564

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 565 GRTLSDYNIQKESTLHLVL 583



 Score =  255 bits (651), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 223 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 282

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 283 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 340

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 341 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 400

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 401 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 460

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 461 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 520

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 521 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 580

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 581 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 640

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 641 GRTLSDYNIQKESTLHLVL 659



 Score =  255 bits (651), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 299 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 358

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 359 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 416

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 417 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 476

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 477 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 536

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 537 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 596

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 597 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 656

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 657 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 716

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 717 GRTLSDYNIQKESTLHLVL 735



 Score =  255 bits (651), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 375 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 434

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 435 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 492

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 493 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 552

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 553 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 612

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 613 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 672

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 673 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 732

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 733 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 792

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 793 GRTLSDYNIQKESTLHLVL 811



 Score =  255 bits (651), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 451 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 510

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 511 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 568

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 569 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 628

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 629 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 688

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 689 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 748

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 749 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 808

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 809 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 868

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 869 GRTLSDYNIQKESTLHLVL 887



 Score =  255 bits (651), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 527 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 586

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 587 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 644

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 645 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 704

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 705 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 764

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 765 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 824

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 825 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 884

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 885 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 944

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 945 GRTLSDYNIQKESTLHLVL 963



 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 137/377 (36%), Positives = 206/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 57  MQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 114

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 115 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 174

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 175 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 234

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 235 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 294

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 295 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 354

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 355 LRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 414

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 415 TLSDYNIQKESTLHLVL 431



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/300 (35%), Positives = 160/300 (53%), Gaps = 12/300 (4%)

Query: 139 ILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFY 198
           I+ IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y
Sbjct: 56  IMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 115

Query: 199 DMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDL 255
           +++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L
Sbjct: 116 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 175

Query: 256 FYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVK 312
            +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK
Sbjct: 176 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 235

Query: 313 VKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDP 372
            K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          
Sbjct: 236 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 295

Query: 373 SISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           +I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 296 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 355



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/230 (34%), Positives = 121/230 (52%), Gaps = 9/230 (3%)

Query: 206 LEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEAC 265
           L++  + +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  
Sbjct: 50  LQLTDAIMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 109

Query: 266 KTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTP 322
           +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK K+ DK   P
Sbjct: 110 RTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 169

Query: 323 LHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISE 382
              Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+
Sbjct: 170 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 229

Query: 383 VKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
             E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 230 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 279


>gi|325181623|emb|CCA16073.1| polyubiquitin putative [Albugo laibachii Nc14]
          Length = 538

 Score =  255 bits (651), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 389 TGKTITLEVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 509 GRTLADYNIQKESTLHLVL 527



 Score =  255 bits (651), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 433 GRTLADYNIQKESTLHLVL 451



 Score =  211 bits (536), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|328792775|ref|XP_395993.4| PREDICTED: polyubiquitin-A-like isoform 1 [Apis mellifera]
          Length = 795

 Score =  254 bits (650), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  254 bits (650), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  254 bits (650), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  254 bits (650), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYNIQKESTLHLVL 679



 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 243/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 319 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 379 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 436

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 437 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 496

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 497 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 556

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 616

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 617 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 676

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 677 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 736

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL DY +     + LV 
Sbjct: 737 GRTLLDYNIQKESTLHLVL 755



 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 137/377 (36%), Positives = 206/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|326517545|dbj|BAK03691.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 457

 Score =  254 bits (650), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 169/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA V    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKVQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 433 GRTLADYNIQKESTLHLVL 451



 Score =  211 bits (537), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 141/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  V +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKVQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|124359683|gb|ABD32351.2| Ubiquitin [Medicago truncatula]
          Length = 538

 Score =  254 bits (650), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 20  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 79

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 80  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 137

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 138 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 197

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 198 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 257

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 258 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 317

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 318 TGKTITLEVESSDTIDNVKAKILDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 377

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 378 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 437

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 438 GRTLADYNIQKESTLHLVL 456



 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 96  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 155

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 156 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 213

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 214 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 273

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 274 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 333

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 334 NVKAKILDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 393

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 394 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 453

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 454 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 513

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 514 GRTLADYNIQKESTLHLVL 532



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 138/380 (36%), Positives = 203/380 (53%), Gaps = 14/380 (3%)

Query: 59  LSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
           +  M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T
Sbjct: 3   IRSMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 60

Query: 119 MTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAA 178
           +   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+   
Sbjct: 61  LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD 120

Query: 179 DHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVV 235
              +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    +
Sbjct: 121 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 180

Query: 236 RDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKT 292
            +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT
Sbjct: 181 DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKT 240

Query: 293 WGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTL 352
             GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STL
Sbjct: 241 LTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 300

Query: 353 HMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVK------FQAAVKELLVDQVALQ 406
           H+VL     +          +I+L +  S+  +  K K           + L+     L+
Sbjct: 301 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKILDKEGIPPDQQRLIFAGKQLE 360

Query: 407 DDRTLADYGMDLSEKVVLVF 426
           D RTL+DY +     + LV 
Sbjct: 361 DGRTLSDYNIQKESTLHLVL 380



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/228 (35%), Positives = 118/228 (51%), Gaps = 9/228 (3%)

Query: 208 MFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKT 267
           M   S+QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +T
Sbjct: 1   MIIRSMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 60

Query: 268 LASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLH 324
           LA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P  
Sbjct: 61  LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD 120

Query: 325 LQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVK 384
            Q ++FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  
Sbjct: 121 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 180

Query: 385 EMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 181 DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 228


>gi|413926513|gb|AFW66445.1| ubiquitin2 [Zea mays]
          Length = 535

 Score =  254 bits (650), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 17  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 76

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 77  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 134

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 135 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 194

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 195 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 254

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 255 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 314

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 315 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 374

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 375 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 434

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 435 GRTLADYNIQKESTLHLVL 453



 Score =  254 bits (650), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 93  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 152

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 153 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 210

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 211 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 270

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 271 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 330

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 331 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 390

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 391 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 450

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 451 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 510

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 511 GRTLADYNIQKESTLHLVL 529



 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 140/378 (37%), Positives = 204/378 (53%), Gaps = 14/378 (3%)

Query: 61  EMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMT 120
           +M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+ 
Sbjct: 2   QMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLA 59

Query: 121 SMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADH 180
             NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+     
Sbjct: 60  DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ 119

Query: 181 IMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRD 237
            +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +
Sbjct: 120 RLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDN 179

Query: 238 VKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWG 294
           VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  
Sbjct: 180 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLT 239

Query: 295 GKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHM 354
           GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+
Sbjct: 240 GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 299

Query: 355 VLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDD 408
           VL     +          +I+L +  S+  +  K K Q         + L+     L+D 
Sbjct: 300 VLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDG 359

Query: 409 RTLADYGMDLSEKVVLVF 426
           RTLADY +     + LV 
Sbjct: 360 RTLADYNIQKESTLHLVL 377


>gi|248337|gb|AAB21993.1| polyubiquitin [Zea mays]
 gi|248339|gb|AAB21994.1| polyubiquitin [Zea mays]
 gi|33323474|gb|AAQ07454.1| ubiquitin [Musa acuminata]
 gi|52076878|dbj|BAD45891.1| polyubiquitin [Oryza sativa Japonica Group]
 gi|218198760|gb|EEC81187.1| hypothetical protein OsI_24193 [Oryza sativa Indica Group]
 gi|222636097|gb|EEE66229.1| hypothetical protein OsJ_22384 [Oryza sativa Japonica Group]
 gi|413926516|gb|AFW66448.1| ubiquitin2 [Zea mays]
 gi|413935667|gb|AFW70218.1| clone MubG1 ubiquitin [Zea mays]
          Length = 533

 Score =  254 bits (650), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 433 GRTLADYNIQKESTLHLVL 451



 Score =  254 bits (650), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 389 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 509 GRTLADYNIQKESTLHLVL 527



 Score =  211 bits (536), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|902584|gb|AAC49013.1| polyubiquitin containing 7 ubiquitin monomers [Zea mays]
          Length = 533

 Score =  254 bits (650), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVVRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 389 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 509 GRTLADYNIQKESTLHLVL 527



 Score =  253 bits (646), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +V+     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVVRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 433 GRTLADYNIQKESTLHLVL 451



 Score =  211 bits (536), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 138/365 (37%), Positives = 199/365 (54%), Gaps = 14/365 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADY 414
           TLADY
Sbjct: 359 TLADY 363



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/299 (35%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299


>gi|225461088|ref|XP_002282119.1| PREDICTED: polyubiquitin-A-like [Vitis vinifera]
          Length = 761

 Score =  254 bits (650), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 433 GRTLADYNIQKESTLHLVL 451



 Score =  254 bits (650), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 389 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 509 GRTLADYNIQKESTLHLVL 527



 Score =  254 bits (650), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 465 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 585 GRTLADYNIQKESTLHLVL 603



 Score =  254 bits (650), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 541 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 661 GRTLADYNIQKESTLHLVL 679



 Score =  254 bits (650), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 319 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 378

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 379 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 436

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 437 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 496

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 497 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 556

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 616

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 617 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 676

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 677 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 736

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 737 GRTLADYNIQKESTLHLVL 755



 Score =  211 bits (536), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|328856761|gb|EGG05881.1| hypothetical protein MELLADRAFT_87680 [Melampsora larici-populina
           98AG31]
          Length = 535

 Score =  254 bits (650), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 433 GRTLADYNIQKESTLHLVL 451



 Score =  254 bits (650), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 389 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 509 GRTLADYNIQKESTLHLVL 527



 Score =  211 bits (536), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|357123434|ref|XP_003563415.1| PREDICTED: polyubiquitin-A-like [Brachypodium distachyon]
          Length = 609

 Score =  254 bits (650), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 433 GRTLADYNIQKESTLHLVL 451



 Score =  254 bits (650), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 389 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 509 GRTLADYNIQKESTLHLVL 527



 Score =  254 bits (650), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 465 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 585 GRTLADYNIQKESTLHLVL 603



 Score =  211 bits (536), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|357475981|ref|XP_003608276.1| Ubiquitin [Medicago truncatula]
 gi|355509331|gb|AES90473.1| Ubiquitin [Medicago truncatula]
          Length = 533

 Score =  254 bits (650), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKILDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 433 GRTLADYNIQKESTLHLVL 451



 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKILDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 389 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 509 GRTLADYNIQKESTLHLVL 527



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 138/377 (36%), Positives = 202/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVK------FQAAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K           + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKILDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|157877206|ref|XP_001686933.1| putative polyubiquitin [Leishmania major strain Friedlin]
 gi|68130008|emb|CAJ09316.1| putative polyubiquitin [Leishmania major strain Friedlin]
          Length = 837

 Score =  254 bits (650), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 164/439 (37%), Positives = 245/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 319 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLR 378

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T  V+E  P  T++N+K  IQ KEGI  DQ  L++ GK L E+  T+
Sbjct: 379 GGMQIFVKTLTGKT-IVLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EEGRTL 436

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 437 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQ 496

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LE+ +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 497 QRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIE 556

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 616

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTI L+V+P +T+++VK K+ DK   P   Q ++FAGK+L E   L+ YNIQK STLH
Sbjct: 617 TGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLH 676

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L++
Sbjct: 677 LVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEE 736

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 737 GRTLSDYNIQKESTLHLVL 755



 Score =  253 bits (646), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 163/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 395 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLR 454

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T   +E  P  T++N+K  IQ KEGI  DQ  L++ GK L E+  T+
Sbjct: 455 GGMQIFVKTLTGKT-IALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EEGRTL 512

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 513 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQ 572

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LE+ +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 573 QRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIE 632

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 633 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 692

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTI L+V+P +T+++VK K+ DK   P   Q ++FAGK+L E   L+ YNIQK STLH
Sbjct: 693 TGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLH 752

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L++
Sbjct: 753 LVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEE 812

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 813 GRTLSDYNIQKESTLHLVL 831



 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 163/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T   +E  P  T++N+K  IQ KEGI  DQ  L++ GK L E+  T+
Sbjct: 151 GGMQIFVKTLTGKT-IALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EEGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LE+ +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTI L+V+P +T+++VK K+ DK   P   Q ++FAGK+L E   L+ YNIQK STLH
Sbjct: 389 TGKTIVLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L++
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEE 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  252 bits (644), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 163/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T   +E  P  T++N+K  IQ KEGI  DQ  L++ GK L E+  T+
Sbjct: 227 GGMQIFVKTLTGKT-IALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EEGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LE+ +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIVLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTI L+V+P +T+++VK K+ DK   P   Q ++FAGK+L E   L+ YNIQK STLH
Sbjct: 465 TGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L++
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEE 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  252 bits (644), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 163/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T   +E  P  T++N+K  IQ KEGI  DQ  L++ GK L E+  T+
Sbjct: 303 GGMQIFVKTLTGKT-IALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EEGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIVLEVEPSDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LE+ +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTI L+V+P +T+++VK K+ DK   P   Q ++FAGK+L E   L+ YNIQK STLH
Sbjct: 541 TGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L++
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEE 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYNIQKESTLHLVL 679



 Score =  251 bits (642), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 163/439 (37%), Positives = 243/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T   +E  P  T++N+K  IQ KEGI  DQ  L++ GK L E+  T+
Sbjct: 75  GGMQIFVKTLTGKT-IALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EEGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LE+ +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTI L+V+P +T+++VK K+ DK   P   Q ++FAGK+L E   L+ YNIQK STLH
Sbjct: 313 TGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I L +  S+  E  K K Q         + L+     L++
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTIVLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEE 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 135/377 (35%), Positives = 206/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T   +E  P  T++N+K  IQ KEGI  DQ  L++ GK L E+  T++ 
Sbjct: 1   MQIFVKTLTGKT-IALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EEGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LE+ +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTI L+V+P +T+++VK K+ DK   P   Q ++FAGK+L E   L+ YNIQK STLH+V
Sbjct: 239 KTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L++ R
Sbjct: 299 LRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|16660462|gb|AAL27564.1|AF429430_1 polyubiquitin OUB2 [Olea europaea]
          Length = 457

 Score =  254 bits (650), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 433 GRTLADYNIQKESTLHLVL 451



 Score =  211 bits (536), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|356548680|ref|XP_003542728.1| PREDICTED: polyubiquitin-C-like isoform 1 [Glycine max]
 gi|356548682|ref|XP_003542729.1| PREDICTED: polyubiquitin-C-like isoform 2 [Glycine max]
          Length = 533

 Score =  254 bits (650), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 389 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 509 GRTLADYNIQKESTLHLVL 527



 Score =  253 bits (646), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 433 GRTLADYNIQKESTLHLVL 451



 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 204/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|357513725|ref|XP_003627151.1| Ubiquitin [Medicago truncatula]
 gi|327492449|dbj|BAK18565.1| polyubiquitin [Mesembryanthemum crystallinum]
 gi|355521173|gb|AET01627.1| Ubiquitin [Medicago truncatula]
          Length = 533

 Score =  254 bits (650), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 433 GRTLADYNIQKESTLHLVL 451



 Score =  254 bits (650), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 389 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 509 GRTLADYNIQKESTLHLVL 527



 Score =  211 bits (536), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|240255754|ref|NP_849299.4| polyubiquitin 10 [Arabidopsis thaliana]
 gi|240255758|ref|NP_849301.4| polyubiquitin 10 [Arabidopsis thaliana]
 gi|297809731|ref|XP_002872749.1| hexameric polyubiquitin [Arabidopsis lyrata subsp. lyrata]
 gi|449454712|ref|XP_004145098.1| PREDICTED: polyubiquitin 10-like [Cucumis sativus]
 gi|449471945|ref|XP_004153450.1| PREDICTED: polyubiquitin 10-like [Cucumis sativus]
 gi|302595948|sp|P0CG85.1|UBI1P_NICSY RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|302596003|sp|Q8H159.2|UBQ10_ARATH RecName: Full=Polyubiquitin 10; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|170352|gb|AAA34123.1| hexameric polyubiquitin [Nicotiana sylvestris]
 gi|870792|gb|AAA68878.1| polyubiquitin [Arabidopsis thaliana]
 gi|4115333|gb|AAD03341.1| ubiquitin [Pisum sativum]
 gi|4115335|gb|AAD03342.1| ubiquitin [Pisum sativum]
 gi|22655101|gb|AAM98141.1| polyubiquitin UBQ10 [Arabidopsis thaliana]
 gi|118481031|gb|ABK92469.1| unknown [Populus trichocarpa]
 gi|147805226|emb|CAN64480.1| hypothetical protein VITISV_002813 [Vitis vinifera]
 gi|241740189|gb|ACS68204.1| ubiquitin 10.1 [Brassica napus]
 gi|297318586|gb|EFH49008.1| hexameric polyubiquitin [Arabidopsis lyrata subsp. lyrata]
 gi|312282619|dbj|BAJ34175.1| unnamed protein product [Thellungiella halophila]
 gi|332657100|gb|AEE82500.1| polyubiquitin 10 [Arabidopsis thaliana]
 gi|332657102|gb|AEE82502.1| polyubiquitin 10 [Arabidopsis thaliana]
          Length = 457

 Score =  254 bits (650), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 433 GRTLADYNIQKESTLHLVL 451



 Score =  211 bits (536), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|357474769|ref|XP_003607670.1| Ubiquitin [Medicago truncatula]
 gi|355508725|gb|AES89867.1| Ubiquitin [Medicago truncatula]
          Length = 533

 Score =  254 bits (650), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 433 GRTLADYNIQKESTLHLVL 451



 Score =  254 bits (650), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 389 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 509 GRTLADYNIQKESTLHLVL 527



 Score =  211 bits (536), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|154346116|ref|XP_001568995.1| putative polyubiquitin [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134066337|emb|CAM44128.1| putative polyubiquitin [Leishmania braziliensis MHOM/BR/75/M2904]
          Length = 992

 Score =  254 bits (649), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 163/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 319 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLR 378

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T   +E  P  T++N+K  IQ KEGI  DQ  L++ GK L E+  T+
Sbjct: 379 GGMQIFVKTLTGKT-IALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EEGRTL 436

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 437 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQ 496

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LE+ +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 497 QRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIE 556

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 616

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTI L+V+P +T+++VK K+ DK   P   Q ++FAGK+L E   L+ YNIQK STLH
Sbjct: 617 TGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLH 676

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L++
Sbjct: 677 LVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEE 736

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 737 GRTLSDYNIQKESTLHLVL 755



 Score =  254 bits (648), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 163/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T   +E  P  T++N+K  IQ KEGI  DQ  L++ GK L E+  T+
Sbjct: 75  GGMQIFVKTLTGKT-IALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EEGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LE+ +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTI L+V+P +T+++VK K+ DK   P   Q ++FAGK+L E   L+ YNIQK STLH
Sbjct: 313 TGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L++
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEE 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 163/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T   +E  P  T++N+K  IQ KEGI  DQ  L++ GK L E+  T+
Sbjct: 151 GGMQIFVKTLTGKT-IALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EEGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LE+ +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTI L+V+P +T+++VK K+ DK   P   Q ++FAGK+L E   L+ YNIQK STLH
Sbjct: 389 TGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L++
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEE 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  251 bits (640), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 165/440 (37%), Positives = 245/440 (55%), Gaps = 17/440 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 471 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLR 530

Query: 60  SEMKLFVKIPTNQT-ATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
             M++FVK  T +T A  VEA    T++N+K  IQ KEGI  DQ  L++ GK L E+  T
Sbjct: 531 GGMQIFVKTLTGKTIALEVEA--SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EEGRT 587

Query: 119 MTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAA 178
           ++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+   
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPD 647

Query: 179 DHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVV 235
              +I+ GK+LE+ +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    +
Sbjct: 648 QQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTI 707

Query: 236 RDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKT 292
            +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT
Sbjct: 708 ENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKT 767

Query: 293 WGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTL 352
             GKTI L+V+P +T+++VK K+ DK   P   Q ++FAGK+L E   L+ YNIQK STL
Sbjct: 768 LTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTL 827

Query: 353 HMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQ 406
           H+VL     +          +I+L +  S+  E  K K Q         + L+     L+
Sbjct: 828 HLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 887

Query: 407 DDRTLADYGMDLSEKVVLVF 426
           + RTL+DY +     + LV 
Sbjct: 888 EGRTLSDYNIQKESTLHLVL 907



 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 162/439 (36%), Positives = 243/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 547 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLR 606

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T   +E  P  T++N+K  IQ KEGI  DQ  L++ GK L E+  T+
Sbjct: 607 GGMQIFVKTLTGKT-IALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EEGRTL 664

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 665 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQ 724

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LE+ +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 725 QRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIE 784

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 785 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 844

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTI L+V+  +T+++VK K+ DK   P   Q ++FAGK+L E   L+ YNIQK STLH
Sbjct: 845 TGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLH 904

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L++
Sbjct: 905 LVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEE 964

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 965 GRTLSDYNIQKESTLHLVL 983



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/299 (34%), Positives = 159/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LE+ +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTI L+V+P +T+++VK 
Sbjct: 121 FAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L E   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L++ RTL+DY +     + LV 
Sbjct: 241 IALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVL 299


>gi|302595949|sp|P0CH04.1|UBI1P_PETCR RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|302595950|sp|P0CH05.1|UBI2P_PETCR RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|288112|emb|CAA45621.1| polyubiquitin [Petroselinum crispum]
 gi|288114|emb|CAA45622.1| polyubiquitin [Petroselinum crispum]
          Length = 458

 Score =  254 bits (649), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 433 GRTLADYNIQKESTLHLVL 451



 Score =  211 bits (536), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|2760347|gb|AAB95251.1| ubiquitin [Arabidopsis thaliana]
          Length = 456

 Score =  254 bits (649), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 433 GRTLADYNIQKESTLHLVL 451



 Score =  211 bits (536), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|115444401|ref|NP_001045980.1| Os02g0161900 [Oryza sativa Japonica Group]
 gi|115469558|ref|NP_001058378.1| Os06g0681400 [Oryza sativa Japonica Group]
 gi|6013289|gb|AAF01315.1|AF184279_1 polyubiquitin [Oryza sativa Indica Group]
 gi|6013291|gb|AAF01316.1|AF184280_1 polyubiquitin [Oryza sativa Indica Group]
 gi|416038|emb|CAA53665.1| polyubiquitin [Oryza sativa Indica Group]
 gi|1574944|gb|AAC49806.1| polyubiquitin [Oryza sativa Indica Group]
 gi|49389251|dbj|BAD25213.1| polyubiquitin 6 [Oryza sativa Japonica Group]
 gi|113535511|dbj|BAF07894.1| Os02g0161900 [Oryza sativa Japonica Group]
 gi|113596418|dbj|BAF20292.1| Os06g0681400 [Oryza sativa Japonica Group]
 gi|215715366|dbj|BAG95117.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218190115|gb|EEC72542.1| hypothetical protein OsI_05955 [Oryza sativa Indica Group]
 gi|222622224|gb|EEE56356.1| hypothetical protein OsJ_05481 [Oryza sativa Japonica Group]
 gi|284431760|gb|ADB84621.1| polyubiquitin [Oryza sativa Japonica Group]
 gi|306415955|gb|ADM86852.1| polyubiquitin [Oryza sativa Japonica Group]
 gi|326504784|dbj|BAK06683.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|332379898|gb|AEE65380.1| ubiquitin 2 [Panicum virgatum]
 gi|413926517|gb|AFW66449.1| ubiquitin2 [Zea mays]
          Length = 457

 Score =  254 bits (649), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 433 GRTLADYNIQKESTLHLVL 451



 Score =  211 bits (536), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|326511535|dbj|BAJ91912.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326522901|dbj|BAJ88496.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 457

 Score =  254 bits (649), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 433 GRTLADYNIQKESTLHLVL 451



 Score =  211 bits (536), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|242062832|ref|XP_002452705.1| hypothetical protein SORBIDRAFT_04g031060 [Sorghum bicolor]
 gi|241932536|gb|EES05681.1| hypothetical protein SORBIDRAFT_04g031060 [Sorghum bicolor]
          Length = 459

 Score =  254 bits (649), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 433 GRTLADYNIQKESTLHLVL 451



 Score =  211 bits (536), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|4115337|gb|AAD03343.1| ubiquitin [Pisum sativum]
          Length = 457

 Score =  254 bits (649), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 433 GRTLADYNIQKESTLHLVL 451



 Score =  210 bits (535), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|225465623|ref|XP_002267206.1| PREDICTED: polyubiquitin-C-like [Vitis vinifera]
          Length = 538

 Score =  254 bits (649), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 433 GRTLADYNIQKESTLHLVL 451



 Score =  254 bits (649), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 389 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 509 GRTLADYNIQKESTLHLVL 527



 Score =  210 bits (535), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|18824|emb|CAA40324.1| hexaubiquitin protein [Helianthus annuus]
 gi|1204096|emb|CAA40325.1| hexaubiquitin protein [Helianthus annuus]
          Length = 457

 Score =  254 bits (649), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 433 GRTLADYNIQKESTLHLVL 451



 Score =  210 bits (535), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|331236894|ref|XP_003331105.1| polyubiquitin-A [Puccinia graminis f. sp. tritici CRL 75-36-700-3]
 gi|309310095|gb|EFP86686.1| polyubiquitin-A [Puccinia graminis f. sp. tritici CRL 75-36-700-3]
          Length = 609

 Score =  254 bits (649), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 433 GRTLADYNIQKESTLHLVL 451



 Score =  254 bits (649), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 389 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 509 GRTLADYNIQKESTLHLVL 527



 Score =  254 bits (649), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 465 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 585 GRTLADYNIQKESTLHLVL 603



 Score =  210 bits (535), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|297840967|ref|XP_002888365.1| polyubiquitin [Arabidopsis lyrata subsp. lyrata]
 gi|297334206|gb|EFH64624.1| polyubiquitin [Arabidopsis lyrata subsp. lyrata]
          Length = 458

 Score =  254 bits (649), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LE+E    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEIESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 433 GRTLADYNIQKESTLHLVL 451



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/299 (36%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L I  S+  +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 241 ITLEIESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299


>gi|326501424|dbj|BAK02501.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 457

 Score =  254 bits (649), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAEIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 433 GRTLADYNIQKESTLHLVL 451



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAEIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|154339611|ref|XP_001562497.1| polyubiquitin, putative [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134063080|emb|CAM39530.1| polyubiquitin, putative [Leishmania braziliensis MHOM/BR/75/M2904]
          Length = 1068

 Score =  254 bits (648), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 163/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 395 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLR 454

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T   +E  P  T++N+K  IQ KEGI  DQ  L++ GK L E+  T+
Sbjct: 455 GGMQIFVKTLTGKT-IALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EEGRTL 512

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 513 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQ 572

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LE+ +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 573 QRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIE 632

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 633 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 692

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTI L+V+P +T+++VK K+ DK   P   Q ++FAGK+L E   L+ YNIQK STLH
Sbjct: 693 TGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLH 752

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L++
Sbjct: 753 LVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEE 812

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 813 GRTLSDYNIQKESTLHLVL 831



 Score =  254 bits (648), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 163/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1    MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
            ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 623  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLR 682

Query: 60   SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
              M++FVK  T +T   +E  P  T++N+K  IQ KEGI  DQ  L++ GK L E+  T+
Sbjct: 683  GGMQIFVKTLTGKT-IALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EEGRTL 740

Query: 120  TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
            +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 741  SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQ 800

Query: 180  HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
              +I+ GK+LE+ +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 801  QRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIE 860

Query: 237  DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
            +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 861  NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 920

Query: 294  GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
             GKTI L+V+P +T+++VK K+ DK   P   Q ++FAGK+L E   L+ YNIQK STLH
Sbjct: 921  TGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLH 980

Query: 354  MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
            +VL     +          +I+L +  S+  E  K K Q         + L+     L++
Sbjct: 981  LVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEE 1040

Query: 408  DRTLADYGMDLSEKVVLVF 426
             RTL+DY +     + LV 
Sbjct: 1041 GRTLSDYNIQKESTLHLVL 1059



 Score =  251 bits (641), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 165/440 (37%), Positives = 245/440 (55%), Gaps = 17/440 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQT-ATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
             M++FVK  T +T A  VEA    T++N+K  IQ KEGI  DQ  L++ GK L E+  T
Sbjct: 227 GGMQIFVKTLTGKTIALEVEA--SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EEGRT 283

Query: 119 MTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAA 178
           ++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+   
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPD 343

Query: 179 DHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVV 235
              +I+ GK+LE+ +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    +
Sbjct: 344 QQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTI 403

Query: 236 RDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKT 292
            +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT
Sbjct: 404 ENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKT 463

Query: 293 WGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTL 352
             GKTI L+V+P +T+++VK K+ DK   P   Q ++FAGK+L E   L+ YNIQK STL
Sbjct: 464 LTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTL 523

Query: 353 HMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQ 406
           H+VL     +          +I+L +  S+  E  K K Q         + L+     L+
Sbjct: 524 HLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 583

Query: 407 DDRTLADYGMDLSEKVVLVF 426
           + RTL+DY +     + LV 
Sbjct: 584 EGRTLSDYNIQKESTLHLVL 603



 Score =  251 bits (640), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 162/439 (36%), Positives = 243/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T   +E  P  T++N+K  IQ KEGI  DQ  L++ GK L E+  T+
Sbjct: 75  GGMQIFVKTLTGKT-IALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EEGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LE+ +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTI L+V+  +T+++VK K+ DK   P   Q ++FAGK+L E   L+ YNIQK STLH
Sbjct: 313 TGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L++
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEE 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 165/440 (37%), Positives = 245/440 (55%), Gaps = 17/440 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 471 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLR 530

Query: 60  SEMKLFVKIPTNQT-ATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
             M++FVK  T +T A  VEA    T++N+K  IQ KEGI  DQ  L++ GK L E+  T
Sbjct: 531 GGMQIFVKTLTGKTIALEVEA--SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EEGRT 587

Query: 119 MTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAA 178
           ++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+   
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPD 647

Query: 179 DHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVV 235
              +I+ GK+LE+ +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    +
Sbjct: 648 QQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTI 707

Query: 236 RDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKT 292
            +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT
Sbjct: 708 ENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKT 767

Query: 293 WGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTL 352
             GKTI L+V+P +T+++VK K+ DK   P   Q ++FAGK+L E   L+ YNIQK STL
Sbjct: 768 LTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTL 827

Query: 353 HMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQ 406
           H+VL     +          +I+L +  S+  E  K K Q         + L+     L+
Sbjct: 828 HLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 887

Query: 407 DDRTLADYGMDLSEKVVLVF 426
           + RTL+DY +     + LV 
Sbjct: 888 EGRTLSDYNIQKESTLHLVL 907



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 136/378 (35%), Positives = 206/378 (54%), Gaps = 16/378 (4%)

Query: 62  MKLFVKIPTNQT-ATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMT 120
           M++FVK  T +T A  VEA    T++N+K  IQ KEGI  DQ  L++ GK L E+  T++
Sbjct: 1   MQIFVKTLTGKTIALEVEA--SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EEGRTLS 57

Query: 121 SMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADH 180
             NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+     
Sbjct: 58  DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQ 117

Query: 181 IMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRD 237
            +I+ GK+LE+ +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +
Sbjct: 118 RLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIEN 177

Query: 238 VKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWG 294
           VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  
Sbjct: 178 VKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLT 237

Query: 295 GKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHM 354
           GKTI L+V+  +T+++VK K+ DK   P   Q ++FAGK+L E   L+ YNIQK STLH+
Sbjct: 238 GKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 297

Query: 355 VLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDD 408
           VL     +          +I+L +  S+  E  K K Q         + L+     L++ 
Sbjct: 298 VLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEG 357

Query: 409 RTLADYGMDLSEKVVLVF 426
           RTL+DY +     + LV 
Sbjct: 358 RTLSDYNIQKESTLHLVL 375


>gi|302784142|ref|XP_002973843.1| hypothetical protein SELMODRAFT_173723 [Selaginella moellendorffii]
 gi|300158175|gb|EFJ24798.1| hypothetical protein SELMODRAFT_173723 [Selaginella moellendorffii]
          Length = 457

 Score =  254 bits (648), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 433 GRTLADYNIQKESTLHLVL 451



 Score =  207 bits (528), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 138/377 (36%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L E+  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EEGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|297841025|ref|XP_002888394.1| hexaubiquitin protein [Arabidopsis lyrata subsp. lyrata]
 gi|297334235|gb|EFH64653.1| hexaubiquitin protein [Arabidopsis lyrata subsp. lyrata]
          Length = 483

 Score =  253 bits (647), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 433 GRTLADYNIQKESTLHLVL 451



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|225465615|ref|XP_002267017.1| PREDICTED: polyubiquitin-C-like [Vitis vinifera]
          Length = 538

 Score =  253 bits (647), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+ +STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKDSTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T  N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTRKTITL-EVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 AHYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 433 GRTLADYNIQKESTLHLVL 451



 Score =  247 bits (631), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 237/439 (53%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+   N+KA I  KEGI  D   L FAG +LE GR L  Y I+  STLH + +  
Sbjct: 91  LEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAHYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 389 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL DY +     + LV 
Sbjct: 509 GRTLVDYNIQKESTLHLVL 527



 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 137/377 (36%), Positives = 201/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ +S +HLV   +  + IFVK  T + + LEV+ S    +VKA +    G+      
Sbjct: 59  YNIQKDSTLHLVLRLRGGMQIFVKTLTRKTITLEVESSDTTDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLAHYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|571519|gb|AAA75310.1| polyubiquitin [Gracilaria gracilis]
 gi|1095488|prf||2109223A poly-ubiquitin
          Length = 457

 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 164/439 (37%), Positives = 243/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTAKTITLEVESSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/299 (34%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKT 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTAKT 240

Query: 374 ISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|302756493|ref|XP_002961670.1| hypothetical protein SELMODRAFT_227280 [Selaginella moellendorffii]
 gi|300170329|gb|EFJ36930.1| hypothetical protein SELMODRAFT_227280 [Selaginella moellendorffii]
          Length = 687

 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 239/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 433 GRTLADYNIQKESTLHLVL 451



 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 239/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 209 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 389 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 509 GRTLADYNIQKESTLHLVL 527



 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 239/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 285 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 465 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 585 GRTLADYNIQKESTLHLVL 603



 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 239/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 361 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 541 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 661 GRTLADYNIQKESTLHLVL 679



 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|302762631|ref|XP_002964737.1| hypothetical protein SELMODRAFT_270468 [Selaginella moellendorffii]
 gi|300166970|gb|EFJ33575.1| hypothetical protein SELMODRAFT_270468 [Selaginella moellendorffii]
          Length = 535

 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 239/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 433 GRTLADYNIQKESTLHLVL 451



 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 239/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 209 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 389 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 509 GRTLADYNIQKESTLHLVL 527



 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|356548684|ref|XP_003542730.1| PREDICTED: polyubiquitin 10-like [Glycine max]
          Length = 457

 Score =  253 bits (646), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 433 GRTLADYNIQKESTLHLVL 451



 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 204/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|339899350|ref|XP_003392827.1| putative polyubiquitin [Leishmania infantum JPCM5]
 gi|321398786|emb|CBZ09034.1| putative polyubiquitin [Leishmania infantum JPCM5]
          Length = 684

 Score =  253 bits (646), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 163/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T   +E  P  T++N+K  IQ KEGI  DQ  L++ GK L E+  T+
Sbjct: 151 GGMQIFVKTLTGKT-IALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EEGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LE+ +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTI L+V+P +T+++VK K+ DK   P   Q ++FAGK+L E   L+ YNIQK STLH
Sbjct: 389 TGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L++
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEE 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  253 bits (646), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 163/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T   +E  P  T++N+K  IQ KEGI  DQ  L++ GK L E+  T+
Sbjct: 227 GGMQIFVKTLTGKT-IALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EEGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LE+ +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTI L+V+P +T+++VK K+ DK   P   Q ++FAGK+L E   L+ YNIQK STLH
Sbjct: 465 TGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L++
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEE 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  253 bits (646), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 163/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T   +E  P  T++N+K  IQ KEGI  DQ  L++ GK L E+  T+
Sbjct: 303 GGMQIFVKTLTGKT-IALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EEGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LE+ +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTI L+V+P +T+++VK K+ DK   P   Q ++FAGK+L E   L+ YNIQK STLH
Sbjct: 541 TGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L++
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEE 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYNIQKESTLHLVL 679



 Score =  247 bits (631), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 164/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH L +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLLLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T   +E  P  T++N+K  IQ KEGI  DQ  L++ GK L E+  T+
Sbjct: 75  GGMQIFVKTLTGKT-IALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EEGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LE+ +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTI L+V+P +T+++VK K+ DK   P   Q ++FAGK+L E   L+ YNIQK STLH
Sbjct: 313 TGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L++
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEE 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  200 bits (509), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 134/377 (35%), Positives = 206/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T   +E  P  T++N+K  IQ KEGI  DQ  L++ GK L E+  T++ 
Sbjct: 1   MQIFVKTLTGKT-IALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EEGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HL+   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLLLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LE+ +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTI L+V+P +T+++VK K+ DK   P   Q ++FAGK+L E   L+ YNIQK STLH+V
Sbjct: 239 KTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L++ R
Sbjct: 299 LRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|294891345|ref|XP_002773533.1| polyubiquitin, putative [Perkinsus marinus ATCC 50983]
 gi|239878705|gb|EER05349.1| polyubiquitin, putative [Perkinsus marinus ATCC 50983]
          Length = 458

 Score =  253 bits (646), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 166/440 (37%), Positives = 245/440 (55%), Gaps = 17/440 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
             M++FVK  T +T T+ VEA    T++N+K  IQ KEGI  DQ  L++ GK L ED  T
Sbjct: 75  GGMQIFVKTLTGKTITLDVEA--SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 131

Query: 119 MTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAA 178
           ++  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+   
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPD 191

Query: 179 DHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVV 235
              +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    +
Sbjct: 192 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTI 251

Query: 236 RDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKT 292
            +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT
Sbjct: 252 ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKT 311

Query: 293 WGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTL 352
             GKTITLDV+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STL
Sbjct: 312 LTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 371

Query: 353 HMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQ 406
           H+VL     +          +I+L +  S+  E  K K Q         + L+     L+
Sbjct: 372 HLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 431

Query: 407 DDRTLADYGMDLSEKVVLVF 426
           D RTL+DY +     + LV 
Sbjct: 432 DGRTLSDYNIQKESTLHLVL 451



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 138/378 (36%), Positives = 208/378 (55%), Gaps = 16/378 (4%)

Query: 62  MKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMT 120
           M++FVK  T +T T+ VEA    T++N+K  IQ KEGI  DQ  L++ GK L ED  T++
Sbjct: 1   MQIFVKTLTGKTITLDVEA--SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLS 57

Query: 121 SMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADH 180
             NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+     
Sbjct: 58  DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQ 117

Query: 181 IMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRD 237
            +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + +
Sbjct: 118 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIEN 177

Query: 238 VKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWG 294
           VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  
Sbjct: 178 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLT 237

Query: 295 GKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHM 354
           GKTITLDV+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+
Sbjct: 238 GKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297

Query: 355 VLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDD 408
           VL     +          +I+L +  S+  E  K K Q         + L+     L+D 
Sbjct: 298 VLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 357

Query: 409 RTLADYGMDLSEKVVLVF 426
           RTL+DY +     + LV 
Sbjct: 358 RTLSDYNIQKESTLHLVL 375


>gi|62911180|gb|AAX56917.1| polyubiquitin [Gracilaria lemaneiformis]
          Length = 457

 Score =  253 bits (646), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 162/427 (37%), Positives = 239/427 (55%), Gaps = 15/427 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADY 414
            RTL+DY
Sbjct: 433 GRTLSDY 439



 Score =  240 bits (613), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 146/363 (40%), Positives = 214/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK ST H
Sbjct: 389 TGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTPH 448

Query: 354 MVL 356
           +VL
Sbjct: 449 LVL 451



 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 137/377 (36%), Positives = 206/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+KT IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|168016982|ref|XP_001761027.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162687713|gb|EDQ74094.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 533

 Score =  253 bits (646), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 239/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 433 GRTLADYNIQKESTLHLVL 451



 Score =  253 bits (646), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 239/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 209 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 389 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 509 GRTLADYNIQKESTLHLVL 527



 Score =  211 bits (537), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|168043709|ref|XP_001774326.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674318|gb|EDQ60828.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 457

 Score =  253 bits (646), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 239/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 433 GRTLADYNIQKESTLHLVL 451



 Score =  211 bits (537), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|3126967|gb|AAC16012.1| polyubiquitin [Elaeagnus umbellata]
          Length = 458

 Score =  253 bits (646), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK ++ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESLDTIDNVKAQIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 433 GRTLADYNIQKESTLHLVL 451



 Score =  207 bits (528), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 142/381 (37%), Positives = 207/381 (54%), Gaps = 22/381 (5%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFID--PSISLSISISEVKEMAKVKFQAAVKE--------LLVDQVAL 405
           L    R+     IF+      ++++ +  +  +  VK Q   KE        L+     L
Sbjct: 299 L----RLRGGMQIFVKTLTGKTITLEVESLDTIDNVKAQIQDKEGIPPDQQRLIFAGKQL 354

Query: 406 QDDRTLADYGMDLSEKVVLVF 426
           +D RTLADY +     + LV 
Sbjct: 355 EDGRTLADYNIQKESTLHLVL 375


>gi|297805150|ref|XP_002870459.1| polyubiquitin [Arabidopsis lyrata subsp. lyrata]
 gi|297316295|gb|EFH46718.1| polyubiquitin [Arabidopsis lyrata subsp. lyrata]
          Length = 537

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 166/439 (37%), Positives = 241/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 94  LEVESSDTIDNVKAKIQDKEGILPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 153

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  I+ KEGI +DQ  L++ GK L ED  T+
Sbjct: 154 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIEDKEGIPTDQQRLIFAGKQL-EDGRTL 211

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I ++KA +    G+    
Sbjct: 212 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQ 271

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T     + LEVE    + 
Sbjct: 272 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGRTITLEVESSDTID 331

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +  ++    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 332 NVKAKIQDKEEIPADQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLCGGMQIFVKTL 391

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 392 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 451

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 452 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIVPDQQRLIFAGKQLED 511

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 512 GRTLADYNIQKESTLHLVL 530



 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 164/439 (37%), Positives = 236/439 (53%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           +  + S  I N+KA I  KEGI  D   L FAG +LE GR L DY I+  S LH   +  
Sbjct: 18  LDAESSYTINNVKAQIQDKEGIPLDQQRLIFAGKQLEDGRTLADYNIQKESILHLALRLR 77

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 78  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGILPDQQRLIFAGKQL-EDGRTL 135

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 136 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIEDKEGIPTDQ 195

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 196 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 255

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           ++K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 256 NLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 315

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            G+TITL+V+  +T+ +VK K+ DK + P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 316 TGRTITLEVESSDTIDNVKAKIQDKEEIPADQQRLIFAGKQLEDGRTLADYNIQKESTLH 375

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 376 LVLRLCGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 435

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 436 GRTLADYNIQKESTLHLVL 454



 Score =  157 bits (397), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 102/300 (34%), Positives = 158/300 (52%), Gaps = 12/300 (4%)

Query: 139 ILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFY 198
           ++ IF +  T + + L+ + S+ I +VKA +    G+      +I+ GK+LED +TLA Y
Sbjct: 3   LMQIFARTLTEKTITLDAESSYTINNVKAQIQDKEGIPLDQQRLIFAGKQLEDGRTLADY 62

Query: 199 DMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDL 255
           +++ E +L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L
Sbjct: 63  NIQKESILHLALRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQRL 122

Query: 256 FYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVK 312
            +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK
Sbjct: 123 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 182

Query: 313 VKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDP 372
            K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          
Sbjct: 183 AKIEDKEGIPTDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 242

Query: 373 SISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           +I+L +  S+  +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 243 TITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 302


>gi|350420431|ref|XP_003492506.1| PREDICTED: polyubiquitin-like [Bombus impatiens]
          Length = 471

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 169/449 (37%), Positives = 250/449 (55%), Gaps = 25/449 (5%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL---APSSRIIELP---LIFI----DPSISLSISISEVKEMAKVKFQAA------VKE 397
           +VL     S  ++ L     IF+      +I+L +  S+  E  K K Q         + 
Sbjct: 373 LVLRLRGGSHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 432

Query: 398 LLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           L+     L+D RTL+DY +     + LV 
Sbjct: 433 LIFAGKQLEDGRTLSDYNIQKESTLHLVL 461



 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 137/377 (36%), Positives = 206/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|339896986|ref|XP_001463552.2| polyubiquitin [Leishmania infantum JPCM5]
 gi|321399001|emb|CAM65917.2| polyubiquitin [Leishmania infantum JPCM5]
          Length = 866

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 163/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 69  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLR 128

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T   +E  P  T++N+K  IQ KEGI  DQ  L++ GK L E+  T+
Sbjct: 129 GGMQIFVKTLTGKT-IALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EEGRTL 186

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 187 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQ 246

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LE+ +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 247 QRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIE 306

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 307 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 366

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTI L+V+P +T+++VK K+ DK   P   Q ++FAGK+L E   L+ YNIQK STLH
Sbjct: 367 TGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLH 426

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L++
Sbjct: 427 LVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEE 486

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 487 GRTLSDYNIQKESTLHLVL 505



 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 163/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 145 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLR 204

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T   +E  P  T++N+K  IQ KEGI  DQ  L++ GK L E+  T+
Sbjct: 205 GGMQIFVKTLTGKT-IALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EEGRTL 262

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 263 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQ 322

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LE+ +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 323 QRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIE 382

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 383 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 442

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTI L+V+P +T+++VK K+ DK   P   Q ++FAGK+L E   L+ YNIQK STLH
Sbjct: 443 TGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLH 502

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L++
Sbjct: 503 LVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEE 562

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 563 GRTLSDYNIQKESTLHLVL 581



 Score =  246 bits (628), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 149/377 (39%), Positives = 222/377 (58%), Gaps = 9/377 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 449 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLR 508

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T   +E  P  T++N+K  IQ KEGI  DQ  L++ GK L E+  T+
Sbjct: 509 GGMQIFVKTLTGKT-IALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EEGRTL 566

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 567 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQ 626

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LE+ +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 627 QRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIE 686

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 687 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 746

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTI L+V+P +T+++VK K+ DK   P   Q ++FAGK+L E   L+ YNIQK STLH
Sbjct: 747 TGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLH 806

Query: 354 MVLAPSSRIIELPLIFI 370
           +VL     ++E  L+ +
Sbjct: 807 LVLRLRGGVMEPTLVAL 823



 Score =  241 bits (616), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 156/421 (37%), Positives = 231/421 (54%), Gaps = 15/421 (3%)

Query: 19  KEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVV 77
           KEGI  D   L FAG +LE GR L DY I+  STLH + +    M++FVK  T +T   +
Sbjct: 11  KEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT-IAL 69

Query: 78  EAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPK 137
           E  P  T++N+K  IQ KEGI  DQ  L++ GK L E+  T++  NI+ ES +HLV   +
Sbjct: 70  EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EEGRTLSDYNIQKESTLHLVLRLR 128

Query: 138 EILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAF 197
             + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LE+ +TL+ 
Sbjct: 129 GGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSD 188

Query: 198 YDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQD 254
           Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q 
Sbjct: 189 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQR 248

Query: 255 LFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDV 311
           L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTI L+V+P +T+++V
Sbjct: 249 LIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENV 308

Query: 312 KVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFID 371
           K K+ DK   P   Q ++FAGK+L E   L+ YNIQK STLH+VL     +         
Sbjct: 309 KAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 368

Query: 372 PSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLV 425
            +I+L +  S+  E  K K Q         + L+     L++ RTL+DY +     + LV
Sbjct: 369 KTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLV 428

Query: 426 F 426
            
Sbjct: 429 L 429



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 55/116 (47%), Gaps = 6/116 (5%)

Query: 317 DKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISL 376
           DK   P   Q ++FAGK+L E   L+ YNIQK STLH+VL     +          +I+L
Sbjct: 10  DKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIAL 69

Query: 377 SISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
            +  S+  E  K K Q         + L+     L++ RTL+DY +     + LV 
Sbjct: 70  EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVL 125


>gi|157420221|gb|ABV55648.1| Ubc protein, partial [Penaeus monodon]
          Length = 432

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 161/416 (38%), Positives = 233/416 (56%), Gaps = 15/416 (3%)

Query: 12  LKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPT 70
           +KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +    M++FVK  T
Sbjct: 1   VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLT 60

Query: 71  NQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESII 130
            +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +
Sbjct: 61  GKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTL 118

Query: 131 HLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLE 190
           HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LE
Sbjct: 119 HLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 178

Query: 191 DSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIID 247
           D +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   
Sbjct: 179 DGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG 238

Query: 248 LSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQP 304
           +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P
Sbjct: 239 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEP 298

Query: 305 YNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIE 364
            +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +  
Sbjct: 299 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 358

Query: 365 LPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADY 414
                   +I+L +  S+  E  K K Q         + L+     L+D RTL+DY
Sbjct: 359 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 414



 Score =  248 bits (633), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 149/363 (41%), Positives = 217/363 (59%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 66  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 125

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 126 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 183

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 184 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 243

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 244 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 303

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 304 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 363

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK  TLH
Sbjct: 364 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEFTLH 423

Query: 354 MVL 356
           +VL
Sbjct: 424 LVL 426



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 128/351 (36%), Positives = 191/351 (54%), Gaps = 13/351 (3%)

Query: 88  IKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAA 147
           +K  IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV   +  + IFVK  
Sbjct: 1   VKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 59

Query: 148 TGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLE 207
           TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+++ E  L 
Sbjct: 60  TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 119

Query: 208 M---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEA 264
           +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE 
Sbjct: 120 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 179

Query: 265 CKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQT 321
            +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   
Sbjct: 180 GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 239

Query: 322 PLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISIS 381
           P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S
Sbjct: 240 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPS 299

Query: 382 EVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           +  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 300 DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 350


>gi|356548015|ref|XP_003542399.1| PREDICTED: polyubiquitin-A-like [Glycine max]
          Length = 614

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 167/443 (37%), Positives = 241/443 (54%), Gaps = 18/443 (4%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATV----VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKED 115
             M++FVK  T +T T+    +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED
Sbjct: 227 GGMQIFVKTLTGKTITLETITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-ED 285

Query: 116 TATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGV 175
             T+   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+
Sbjct: 286 GRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGI 345

Query: 176 SAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVL 232
                 +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE  
Sbjct: 346 PPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESS 405

Query: 233 IVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIF 289
             + +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIF
Sbjct: 406 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIF 465

Query: 290 VKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKH 349
           VKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK 
Sbjct: 466 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 525

Query: 350 STLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQV 403
           STLH+VL     +          +++L +  S+  +  K K Q         + L+    
Sbjct: 526 STLHLVLRLRGGMQIFVKTLTGKTVTLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK 585

Query: 404 ALQDDRTLADYGMDLSEKVVLVF 426
            L+D RTLADY +     + LV 
Sbjct: 586 QLEDGRTLADYNIQKESTLHLVL 608



 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 169/444 (38%), Positives = 240/444 (54%), Gaps = 20/444 (4%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIE-----EIVRLEVEV 231
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T        E + LEVE 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLETITLEVES 252

Query: 232 LIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQI 288
              + +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QI
Sbjct: 253 SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQI 312

Query: 289 FVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQK 348
           FVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK
Sbjct: 313 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 372

Query: 349 HSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQ 402
            STLH+VL     +          +I+L +  S+  +  K K Q         + L+   
Sbjct: 373 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG 432

Query: 403 VALQDDRTLADYGMDLSEKVVLVF 426
             L+D RTLADY +     + LV 
Sbjct: 433 KQLEDGRTLADYNIQKESTLHLVL 456



 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 169/444 (38%), Positives = 240/444 (54%), Gaps = 20/444 (4%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATG-----EIVNLEVKHSFAIRDVKAIVGSVVG 174
              NI+ ES +HLV   +  + IFVK  TG     E + LEV+ S  I +VKA +    G
Sbjct: 209 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLETITLEVESSDTIDNVKAKIQDKEG 268

Query: 175 VSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEV 231
           +      +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE 
Sbjct: 269 IPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVES 328

Query: 232 LIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQI 288
              + +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QI
Sbjct: 329 SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQI 388

Query: 289 FVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQK 348
           FVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK
Sbjct: 389 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 448

Query: 349 HSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQ 402
            STLH+VL     +          +I+L +  S+  +  K K Q         + L+   
Sbjct: 449 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG 508

Query: 403 VALQDDRTLADYGMDLSEKVVLVF 426
             L+D RTLADY +     + LV 
Sbjct: 509 KQLEDGRTLADYNIQKESTLHLVL 532



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/308 (35%), Positives = 162/308 (52%), Gaps = 25/308 (8%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFID-- 371
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL    R+     IF+   
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL----RLRGGMQIFVKTL 236

Query: 372 -------PSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDL 418
                   +I+L +  S+  +  K K Q         + L+     L+D RTLADY +  
Sbjct: 237 TGKTITLETITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 296

Query: 419 SEKVVLVF 426
              + LV 
Sbjct: 297 ESTLHLVL 304


>gi|224286458|gb|ACN40936.1| unknown [Picea sitchensis]
          Length = 458

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 239/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 433 GRTLADYNIQKESTLHLVL 451



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 141/377 (37%), Positives = 204/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|342186084|emb|CCC95569.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 961

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 168/440 (38%), Positives = 243/440 (55%), Gaps = 17/440 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQT-ATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
             M++FVK  T +T A  VEA    T++N+K  IQ KEGI  DQ  L++ GK L E+  T
Sbjct: 75  GGMQIFVKTLTGKTIALEVEA--SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EEGRT 131

Query: 119 MTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAA 178
           +   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+   
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPD 191

Query: 179 DHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVV 235
              +I+ GK+LE+ +TLA Y+++ E  L +       +QIFV+T   + + LEVE    +
Sbjct: 192 QQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTI 251

Query: 236 RDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKT 292
            +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT
Sbjct: 252 ENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKT 311

Query: 293 WGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTL 352
             GKTI L+V+  +T+++VK K+ DK   P   Q ++FAGK+L E   LA YNIQK STL
Sbjct: 312 LTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTL 371

Query: 353 HMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQ 406
           H+VL     +          +I+L +  S+  E  K K Q         + L+     L+
Sbjct: 372 HLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 431

Query: 407 DDRTLADYGMDLSEKVVLVF 426
           + RTLADY +     + LV 
Sbjct: 432 EGRTLADYNIQKESTLHLVL 451



 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 168/440 (38%), Positives = 243/440 (55%), Gaps = 17/440 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQT-ATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
             M++FVK  T +T A  VEA    T++N+K  IQ KEGI  DQ  L++ GK L E+  T
Sbjct: 151 GGMQIFVKTLTGKTIALEVEA--SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EEGRT 207

Query: 119 MTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAA 178
           +   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+   
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPD 267

Query: 179 DHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVV 235
              +I+ GK+LE+ +TLA Y+++ E  L +       +QIFV+T   + + LEVE    +
Sbjct: 268 QQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTI 327

Query: 236 RDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKT 292
            +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT
Sbjct: 328 ENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKT 387

Query: 293 WGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTL 352
             GKTI L+V+  +T+++VK K+ DK   P   Q ++FAGK+L E   LA YNIQK STL
Sbjct: 388 LTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTL 447

Query: 353 HMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQ 406
           H+VL     +          +I+L +  S+  E  K K Q         + L+     L+
Sbjct: 448 HLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 507

Query: 407 DDRTLADYGMDLSEKVVLVF 426
           + RTLADY +     + LV 
Sbjct: 508 EGRTLADYNIQKESTLHLVL 527



 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 168/440 (38%), Positives = 243/440 (55%), Gaps = 17/440 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQT-ATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
             M++FVK  T +T A  VEA    T++N+K  IQ KEGI  DQ  L++ GK L E+  T
Sbjct: 227 GGMQIFVKTLTGKTIALEVEA--SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EEGRT 283

Query: 119 MTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAA 178
           +   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+   
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPD 343

Query: 179 DHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVV 235
              +I+ GK+LE+ +TLA Y+++ E  L +       +QIFV+T   + + LEVE    +
Sbjct: 344 QQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTI 403

Query: 236 RDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKT 292
            +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT
Sbjct: 404 ENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKT 463

Query: 293 WGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTL 352
             GKTI L+V+  +T+++VK K+ DK   P   Q ++FAGK+L E   LA YNIQK STL
Sbjct: 464 LTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTL 523

Query: 353 HMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQ 406
           H+VL     +          +I+L +  S+  E  K K Q         + L+     L+
Sbjct: 524 HLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 583

Query: 407 DDRTLADYGMDLSEKVVLVF 426
           + RTLADY +     + LV 
Sbjct: 584 EGRTLADYNIQKESTLHLVL 603



 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 168/440 (38%), Positives = 243/440 (55%), Gaps = 17/440 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQT-ATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
             M++FVK  T +T A  VEA    T++N+K  IQ KEGI  DQ  L++ GK L E+  T
Sbjct: 303 GGMQIFVKTLTGKTIALEVEA--SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EEGRT 359

Query: 119 MTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAA 178
           +   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+   
Sbjct: 360 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPD 419

Query: 179 DHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVV 235
              +I+ GK+LE+ +TLA Y+++ E  L +       +QIFV+T   + + LEVE    +
Sbjct: 420 QQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTI 479

Query: 236 RDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKT 292
            +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT
Sbjct: 480 ENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKT 539

Query: 293 WGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTL 352
             GKTI L+V+  +T+++VK K+ DK   P   Q ++FAGK+L E   LA YNIQK STL
Sbjct: 540 LTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTL 599

Query: 353 HMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQ 406
           H+VL     +          +I+L +  S+  E  K K Q         + L+     L+
Sbjct: 600 HLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 659

Query: 407 DDRTLADYGMDLSEKVVLVF 426
           + RTLADY +     + LV 
Sbjct: 660 EGRTLADYNIQKESTLHLVL 679



 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 168/440 (38%), Positives = 243/440 (55%), Gaps = 17/440 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 319 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLR 378

Query: 60  SEMKLFVKIPTNQT-ATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
             M++FVK  T +T A  VEA    T++N+K  IQ KEGI  DQ  L++ GK L E+  T
Sbjct: 379 GGMQIFVKTLTGKTIALEVEA--SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EEGRT 435

Query: 119 MTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAA 178
           +   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+   
Sbjct: 436 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPD 495

Query: 179 DHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVV 235
              +I+ GK+LE+ +TLA Y+++ E  L +       +QIFV+T   + + LEVE    +
Sbjct: 496 QQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTI 555

Query: 236 RDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKT 292
            +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT
Sbjct: 556 ENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKT 615

Query: 293 WGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTL 352
             GKTI L+V+  +T+++VK K+ DK   P   Q ++FAGK+L E   LA YNIQK STL
Sbjct: 616 LTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTL 675

Query: 353 HMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQ 406
           H+VL     +          +I+L +  S+  E  K K Q         + L+     L+
Sbjct: 676 HLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 735

Query: 407 DDRTLADYGMDLSEKVVLVF 426
           + RTLADY +     + LV 
Sbjct: 736 EGRTLADYNIQKESTLHLVL 755



 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 168/440 (38%), Positives = 243/440 (55%), Gaps = 17/440 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 395 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLR 454

Query: 60  SEMKLFVKIPTNQT-ATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
             M++FVK  T +T A  VEA    T++N+K  IQ KEGI  DQ  L++ GK L E+  T
Sbjct: 455 GGMQIFVKTLTGKTIALEVEA--SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EEGRT 511

Query: 119 MTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAA 178
           +   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+   
Sbjct: 512 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPD 571

Query: 179 DHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVV 235
              +I+ GK+LE+ +TLA Y+++ E  L +       +QIFV+T   + + LEVE    +
Sbjct: 572 QQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTI 631

Query: 236 RDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKT 292
            +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT
Sbjct: 632 ENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKT 691

Query: 293 WGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTL 352
             GKTI L+V+  +T+++VK K+ DK   P   Q ++FAGK+L E   LA YNIQK STL
Sbjct: 692 LTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTL 751

Query: 353 HMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQ 406
           H+VL     +          +I+L +  S+  E  K K Q         + L+     L+
Sbjct: 752 HLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 811

Query: 407 DDRTLADYGMDLSEKVVLVF 426
           + RTLADY +     + LV 
Sbjct: 812 EGRTLADYNIQKESTLHLVL 831



 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 168/440 (38%), Positives = 243/440 (55%), Gaps = 17/440 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 471 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLR 530

Query: 60  SEMKLFVKIPTNQT-ATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
             M++FVK  T +T A  VEA    T++N+K  IQ KEGI  DQ  L++ GK L E+  T
Sbjct: 531 GGMQIFVKTLTGKTIALEVEA--SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EEGRT 587

Query: 119 MTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAA 178
           +   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+   
Sbjct: 588 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPD 647

Query: 179 DHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVV 235
              +I+ GK+LE+ +TLA Y+++ E  L +       +QIFV+T   + + LEVE    +
Sbjct: 648 QQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTI 707

Query: 236 RDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKT 292
            +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT
Sbjct: 708 ENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKT 767

Query: 293 WGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTL 352
             GKTI L+V+  +T+++VK K+ DK   P   Q ++FAGK+L E   LA YNIQK STL
Sbjct: 768 LTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTL 827

Query: 353 HMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQ 406
           H+VL     +          +I+L +  S+  E  K K Q         + L+     L+
Sbjct: 828 HLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 887

Query: 407 DDRTLADYGMDLSEKVVLVF 426
           + RTLADY +     + LV 
Sbjct: 888 EGRTLADYNIQKESTLHLVL 907



 Score =  208 bits (529), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 140/378 (37%), Positives = 205/378 (54%), Gaps = 16/378 (4%)

Query: 62  MKLFVKIPTNQT-ATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMT 120
           M++FVK  T +T A  VEA    T++N+K  IQ KEGI  DQ  L++ GK L E+  T+ 
Sbjct: 1   MQIFVKTLTGKTIALEVEA--SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EEGRTLA 57

Query: 121 SMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADH 180
             NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+     
Sbjct: 58  DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQ 117

Query: 181 IMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRD 237
            +I+ GK+LE+ +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +
Sbjct: 118 RLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIEN 177

Query: 238 VKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWG 294
           VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  
Sbjct: 178 VKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLT 237

Query: 295 GKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHM 354
           GKTI L+V+  +T+++VK K+ DK   P   Q ++FAGK+L E   LA YNIQK STLH+
Sbjct: 238 GKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHL 297

Query: 355 VLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDD 408
           VL     +          +I+L +  S+  E  K K Q         + L+     L++ 
Sbjct: 298 VLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEG 357

Query: 409 RTLADYGMDLSEKVVLVF 426
           RTLADY +     + LV 
Sbjct: 358 RTLADYNIQKESTLHLVL 375



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/186 (40%), Positives = 106/186 (56%), Gaps = 6/186 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 775 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLR 834

Query: 60  SEMKLFVKIPTNQT-ATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
             M++FVK  T +T A  VEA    T++N+K  IQ KEGI  DQ  L++ GK L E+  T
Sbjct: 835 GGMQIFVKTLTGKTIALEVEA--SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EEGRT 891

Query: 119 MTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAA 178
           +   NI+ ES +HLV   +  + IFVK   G     E + S  +R+VKA +    G+   
Sbjct: 892 LADYNIQKESTLHLVLRLRGGMQIFVKTLPGRPC-FEGEASDTMRNVKAKIQDKEGIPPD 950

Query: 179 DHIMIY 184
              +I+
Sbjct: 951 QQRLIF 956


>gi|357123401|ref|XP_003563399.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-C-like [Brachypodium
           distachyon]
          Length = 535

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 169/431 (39%), Positives = 240/431 (55%), Gaps = 21/431 (4%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFI----DPSISLSISISEVKEMAKVKFQ------AAVKELLVDQV 403
           +VL    R  +   IF+      +I+L +  S+  +  K K Q         + L+    
Sbjct: 373 LVL--RLRGGQXMQIFVKTLTGKTITLXVESSDTIDNVKSKIQDKEGLPPDQQRLIFAGK 430

Query: 404 ALQDDRTLADY 414
            L+D RTLADY
Sbjct: 431 QLEDGRTLADY 441



 Score =  250 bits (639), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 167/441 (37%), Positives = 240/441 (54%), Gaps = 17/441 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVL-----PSPFQIFVK 291
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L ++         QIFVK
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGQXMQIFVK 388

Query: 292 TWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHST 351
           T  GKTITL V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK ST
Sbjct: 389 TLTGKTITLXVESSDTIDNVKSKIQDKEGLPPDQQRLIFAGKQLEDGRTLADYNIQKXST 448

Query: 352 LHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVAL 405
           LH+VL     +          +I+L +  S+  +  K K Q         ++L+     L
Sbjct: 449 LHLVLRLRGGMQIFVKTLTGKTITLEVKSSDTIDNVKAKIQDKEGTPPDQQQLIFAGKQL 508

Query: 406 QDDRTLADYGMDLSEKVVLVF 426
           +D RTLADY +     + LV 
Sbjct: 509 EDGRTLADYNIQKESTLHLVL 529



 Score =  211 bits (536), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|74024980|ref|XP_829056.1| polyubiquitin [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
 gi|70834442|gb|EAN79944.1| polyubiquitin, putative [Trypanosoma brucei brucei strain 927/4
           GUTat10.1]
          Length = 685

 Score =  252 bits (644), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 241/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T   +E     T++N+K  IQ KEGI  DQ  L++ GK L E+  T+
Sbjct: 75  GGMQIFVKTLTGKT-IALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EEGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LE+ +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTI L+V+  +T+++VK K+ DK   P   Q ++FAGK+L E   LA YNIQK STLH
Sbjct: 313 TGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L++
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEE 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 433 GRTLADYNIQKESTLHLVL 451



 Score =  252 bits (644), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 241/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T   +E     T++N+K  IQ KEGI  DQ  L++ GK L E+  T+
Sbjct: 151 GGMQIFVKTLTGKT-IALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EEGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LE+ +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTI L+V+  +T+++VK K+ DK   P   Q ++FAGK+L E   LA YNIQK STLH
Sbjct: 389 TGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L++
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEE 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 509 GRTLADYNIQKESTLHLVL 527



 Score =  252 bits (644), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 241/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T   +E     T++N+K  IQ KEGI  DQ  L++ GK L E+  T+
Sbjct: 227 GGMQIFVKTLTGKT-IALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EEGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LE+ +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTI L+V+  +T+++VK K+ DK   P   Q ++FAGK+L E   LA YNIQK STLH
Sbjct: 465 TGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L++
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEE 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 585 GRTLADYNIQKESTLHLVL 603



 Score =  252 bits (644), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 241/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T   +E     T++N+K  IQ KEGI  DQ  L++ GK L E+  T+
Sbjct: 303 GGMQIFVKTLTGKT-IALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EEGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LE+ +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTI L+V+  +T+++VK K+ DK   P   Q ++FAGK+L E   LA YNIQK STLH
Sbjct: 541 TGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L++
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEE 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 661 GRTLADYNIQKESTLHLVL 679



 Score =  207 bits (528), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 137/377 (36%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T   +E     T++N+K  IQ KEGI  DQ  L++ GK L E+  T+  
Sbjct: 1   MQIFVKTLTGKT-IALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EEGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LE+ +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTI L+V+  +T+++VK K+ DK   P   Q ++FAGK+L E   LA YNIQK STLH+V
Sbjct: 239 KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L++ R
Sbjct: 299 LRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|357474763|ref|XP_003607667.1| Multidrug resistance protein ABC transporter family [Medicago
           truncatula]
 gi|355508722|gb|AES89864.1| Multidrug resistance protein ABC transporter family [Medicago
           truncatula]
          Length = 752

 Score =  252 bits (643), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 234 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 293

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 294 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 351

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 352 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 411

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 412 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 471

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 472 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 531

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 532 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 591

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 592 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 651

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 652 GRTLADYNIQKESTLHLVL 670



 Score =  252 bits (643), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 310 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 369

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 370 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 427

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 428 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 487

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 488 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 547

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 548 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 607

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 608 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 667

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 668 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 727

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 728 GRTLADYNIQKESTLHLVL 746



 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 140/378 (37%), Positives = 204/378 (53%), Gaps = 14/378 (3%)

Query: 61  EMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMT 120
           +M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+ 
Sbjct: 219 KMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLA 276

Query: 121 SMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADH 180
             NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+     
Sbjct: 277 DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ 336

Query: 181 IMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRD 237
            +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +
Sbjct: 337 RLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDN 396

Query: 238 VKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWG 294
           VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  
Sbjct: 397 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLT 456

Query: 295 GKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHM 354
           GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+
Sbjct: 457 GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 516

Query: 355 VLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDD 408
           VL     +          +I+L +  S+  +  K K Q         + L+     L+D 
Sbjct: 517 VLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDG 576

Query: 409 RTLADYGMDLSEKVVLVF 426
           RTLADY +     + LV 
Sbjct: 577 RTLADYNIQKESTLHLVL 594



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 84/233 (36%), Positives = 120/233 (51%), Gaps = 11/233 (4%)

Query: 205 LLEMFPSS--IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKL 262
           LL  F  S  +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +L
Sbjct: 210 LLRQFYDSFKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL 269

Query: 263 EACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKL 319
           E  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK 
Sbjct: 270 EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 329

Query: 320 QTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSIS 379
             P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +I+L + 
Sbjct: 330 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 389

Query: 380 ISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
            S+  +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 390 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 442


>gi|221059958|ref|XP_002260624.1| ubiquitin [Plasmodium knowlesi strain H]
 gi|193810698|emb|CAQ42596.1| ubiquitin, putative [Plasmodium knowlesi strain H]
          Length = 609

 Score =  252 bits (643), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 163/439 (37%), Positives = 243/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ +     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-DVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITLDV+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  252 bits (643), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 163/439 (37%), Positives = 243/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ +     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-DVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITLDV+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  252 bits (643), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 163/439 (37%), Positives = 243/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ +     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-DVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITLDV+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 135/377 (35%), Positives = 206/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-DVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITLDV+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|356565543|ref|XP_003550999.1| PREDICTED: polyubiquitin-C-like [Glycine max]
          Length = 533

 Score =  251 bits (642), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 165/427 (38%), Positives = 235/427 (55%), Gaps = 15/427 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K +         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIEEKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADY 414
            RTL DY
Sbjct: 433 GRTLEDY 439



 Score =  247 bits (631), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 162/427 (37%), Positives = 235/427 (55%), Gaps = 15/427 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +++++VK K+ +K   P   Q ++FAGK+L +   L  Y IQK STLH
Sbjct: 389 TGKTITLEVESSDSIENVKAKIEEKEGIPPDQQRLIFAGKQLEDGRTLEDYEIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKAKIQEKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADY 414
           +RTL DY
Sbjct: 509 ERTLEDY 515



 Score =  235 bits (600), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 147/363 (40%), Positives = 210/363 (57%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  +     +    Q L +AG +LE  +TL  Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIEEKEGIPPDQQRLIFAGKQLEDGRTLEDYEIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ +K   P   Q ++FAGK+L +   L  Y+IQK STLH
Sbjct: 465 TGKTITLEVEGSDTIENVKAKIQEKEGIPPDQQRLIFAGKQLEDERTLEDYDIQKESTLH 524

Query: 354 MVL 356
           +VL
Sbjct: 525 LVL 527



 Score =  210 bits (535), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|92790182|emb|CAI83760.1| Polyubiqutin 1 [Epidinium ecaudatum]
          Length = 378

 Score =  251 bits (642), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 151/363 (41%), Positives = 217/363 (59%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I+N+KA I  KEGI  D   L FAG +LE  R L DY I+  STLH + +  
Sbjct: 12  LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLR 71

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ +  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 72  GGMQIFVKTLTGKTITL-DVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTL 129

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+    
Sbjct: 130 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQ 189

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED++TLA Y+++ E  L +       +QIFV+T   + + L+VE    + 
Sbjct: 190 QRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIE 249

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 250 NVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 309

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITLDV+P +T+++VK K+ DK   P   Q ++FAGK+L +N  LA YNIQK STLH
Sbjct: 310 TGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLH 369

Query: 354 MVL 356
           +VL
Sbjct: 370 LVL 372



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 141/374 (37%), Positives = 207/374 (55%), Gaps = 14/374 (3%)

Query: 65  FVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNI 124
           FVK  T +T T+ +  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI
Sbjct: 1   FVKTLTGKTITL-DVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNI 58

Query: 125 KSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIY 184
           + ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+      +I+
Sbjct: 59  QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIF 118

Query: 185 EGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEI 241
            GK+LED++TLA Y+++ E  L +       +QIFV+T   + + L+VE    + +VK  
Sbjct: 119 AGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAK 178

Query: 242 VANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTI 298
           + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTI
Sbjct: 179 IQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 238

Query: 299 TLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAP 358
           TLDV+P +T+++VK K+ DK   P   Q ++FAGK+L +N  LA YNIQK STLH+VL  
Sbjct: 239 TLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRL 298

Query: 359 SSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLA 412
              +          +I+L +  S+  E  K K Q         + L+     L+D+RTLA
Sbjct: 299 RGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLA 358

Query: 413 DYGMDLSEKVVLVF 426
           DY +     + LV 
Sbjct: 359 DYNIQKESTLHLVL 372


>gi|193678764|ref|XP_001950434.1| PREDICTED: polyubiquitin-A-like [Acyrthosiphon pisum]
          Length = 686

 Score =  251 bits (642), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 163/439 (37%), Positives = 245/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     +++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S +I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +++++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  251 bits (642), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 163/439 (37%), Positives = 245/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     +++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S +I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +++++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  251 bits (642), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 163/439 (37%), Positives = 245/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     +++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S +I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +++++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  251 bits (642), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 163/439 (37%), Positives = 245/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     +++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S +I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +++++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYNIQKESTLHLVL 679



 Score =  207 bits (528), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 135/377 (35%), Positives = 207/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     +++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S +I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +++++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|92790144|emb|CAI83741.1| Polyubiqutin 1 [Dasytricha ruminantium]
 gi|92790150|emb|CAI83744.1| Polyubiqutin 4 [Dasytricha ruminantium]
 gi|92790154|emb|CAI83746.1| Polyubiqutin 2 [Isotricha intestinalis]
 gi|92790158|emb|CAI83748.1| Polyubiqutin 2 [Isotricha prostoma]
          Length = 379

 Score =  251 bits (642), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 151/363 (41%), Positives = 217/363 (59%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I+N+KA I  KEGI  D   L FAG +LE  R L DY I+  STLH + +  
Sbjct: 13  LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLR 72

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ +  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 73  GGMQIFVKTLTGKTITL-DVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTL 130

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+    
Sbjct: 131 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQ 190

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED++TLA Y+++ E  L +       +QIFV+T   + + L+VE    + 
Sbjct: 191 QRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIE 250

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 251 NVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 310

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITLDV+P +T+++VK K+ DK   P   Q ++FAGK+L +N  LA YNIQK STLH
Sbjct: 311 TGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLH 370

Query: 354 MVL 356
           +VL
Sbjct: 371 LVL 373



 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 141/375 (37%), Positives = 208/375 (55%), Gaps = 14/375 (3%)

Query: 64  LFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMN 123
           +FVK  T +T T+ +  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+   N
Sbjct: 1   IFVKTLTGKTITL-DVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYN 58

Query: 124 IKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMI 183
           I+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+      +I
Sbjct: 59  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLI 118

Query: 184 YEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKE 240
           + GK+LED++TLA Y+++ E  L +       +QIFV+T   + + L+VE    + +VK 
Sbjct: 119 FAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKA 178

Query: 241 IVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKT 297
            + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKT
Sbjct: 179 KIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 238

Query: 298 ITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLA 357
           ITLDV+P +T+++VK K+ DK   P   Q ++FAGK+L +N  LA YNIQK STLH+VL 
Sbjct: 239 ITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 298

Query: 358 PSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTL 411
               +          +I+L +  S+  E  K K Q         + L+     L+D+RTL
Sbjct: 299 LRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTL 358

Query: 412 ADYGMDLSEKVVLVF 426
           ADY +     + LV 
Sbjct: 359 ADYNIQKESTLHLVL 373


>gi|92790160|emb|CAI83749.1| Polyubiqutin 3 [Isotricha prostoma]
          Length = 374

 Score =  251 bits (642), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 151/363 (41%), Positives = 217/363 (59%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I+N+KA I  KEGI  D   L FAG +LE  R L DY I+  STLH + +  
Sbjct: 8   LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLR 67

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ +  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 68  GGMQIFVKTLTGKTITL-DVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTL 125

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+    
Sbjct: 126 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQ 185

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED++TLA Y+++ E  L +       +QIFV+T   + + L+VE    + 
Sbjct: 186 QRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIE 245

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 246 NVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 305

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITLDV+P +T+++VK K+ DK   P   Q ++FAGK+L +N  LA YNIQK STLH
Sbjct: 306 TGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLH 365

Query: 354 MVL 356
           +VL
Sbjct: 366 LVL 368



 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 138/369 (37%), Positives = 204/369 (55%), Gaps = 14/369 (3%)

Query: 70  TNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESI 129
           T +T T+ +  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES 
Sbjct: 2   TGKTITL-DVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNIQKEST 59

Query: 130 IHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKL 189
           +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+      +I+ GK+L
Sbjct: 60  LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 119

Query: 190 EDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANII 246
           ED++TLA Y+++ E  L +       +QIFV+T   + + L+VE    + +VK  + +  
Sbjct: 120 EDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKE 179

Query: 247 DLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQ 303
            +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITLDV+
Sbjct: 180 GIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVE 239

Query: 304 PYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRII 363
           P +T+++VK K+ DK   P   Q ++FAGK+L +N  LA YNIQK STLH+VL     + 
Sbjct: 240 PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQ 299

Query: 364 ELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMD 417
                    +I+L +  S+  E  K K Q         + L+     L+D+RTLADY + 
Sbjct: 300 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQ 359

Query: 418 LSEKVVLVF 426
               + LV 
Sbjct: 360 KESTLHLVL 368


>gi|92790156|emb|CAI83747.1| Polyubiqutin 1 [Isotricha prostoma]
          Length = 366

 Score =  251 bits (641), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 151/361 (41%), Positives = 216/361 (59%), Gaps = 9/361 (2%)

Query: 3   VKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSE 61
           V+ S+ I+N+KA I  KEGI  D   L FAG +LE  R L DY I+  STLH + +    
Sbjct: 2   VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGG 61

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 62  MQIFVKTLTGKTITL-DVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLAD 119

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+      
Sbjct: 120 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQR 179

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED++TLA Y+++ E  L +       +QIFV+T   + + L+VE    + +V
Sbjct: 180 LIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENV 239

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 240 KAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 299

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITLDV+P +T+++VK K+ DK   P   Q ++FAGK+L +N  LA YNIQK STLH+V
Sbjct: 300 KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLV 359

Query: 356 L 356
           L
Sbjct: 360 L 360



 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 135/358 (37%), Positives = 198/358 (55%), Gaps = 13/358 (3%)

Query: 81  PYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEIL 140
           P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +  +
Sbjct: 4   PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNIQKESTLHLVLRLRGGM 62

Query: 141 SIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDM 200
            IFVK  TG+ + L+V+ S  I +VKA +    G+      +I+ GK+LED++TLA Y++
Sbjct: 63  QIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNI 122

Query: 201 KDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFY 257
           + E  L +       +QIFV+T   + + L+VE    + +VK  + +   +    Q L +
Sbjct: 123 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIF 182

Query: 258 AGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVK 314
           AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITLDV+P +T+++VK K
Sbjct: 183 AGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAK 242

Query: 315 LFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSI 374
           + DK   P   Q ++FAGK+L +N  LA YNIQK STLH+VL     +          +I
Sbjct: 243 IQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 302

Query: 375 SLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           +L +  S+  E  K K Q         + L+     L+D+RTLADY +     + LV 
Sbjct: 303 TLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVL 360



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 108/283 (38%), Positives = 162/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I+N+KA I  KEGI  D   L FAG +LE  R L DY I+  STLH + +  
Sbjct: 76  LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLR 135

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T ++  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 136 GGMQIFVKTLTGKTIT-LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTL 193

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+    
Sbjct: 194 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQ 253

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED++TLA Y+++ E  L +       +QIFV+T   + + L+VE    + 
Sbjct: 254 QRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIE 313

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 314 NVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTL 356



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/284 (35%), Positives = 153/284 (53%), Gaps = 12/284 (4%)

Query: 155 EVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPS 211
           +V+ S  I +VKA +    G+      +I+ GK+LED++TLA Y+++ E  L +      
Sbjct: 1   DVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRG 60

Query: 212 SIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASY 271
            +QIFV+T   + + L+VE    + +VK  + +   +    Q L +AG +LE  +TLA Y
Sbjct: 61  GMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADY 120

Query: 272 GIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSI 328
            I+    L +   L    QIFVKT  GKTITLDV+P +T+++VK K+ DK   P   Q +
Sbjct: 121 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRL 180

Query: 329 VFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAK 388
           +FAGK+L +N  LA YNIQK STLH+VL     +          +I+L +  S+  E  K
Sbjct: 181 IFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVK 240

Query: 389 VKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
            K Q         + L+     L+D+RTLADY +     + LV 
Sbjct: 241 AKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVL 284


>gi|209738556|gb|ACI70147.1| Ubiquitin [Salmo salar]
          Length = 381

 Score =  251 bits (641), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 150/363 (41%), Positives = 218/363 (60%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|148237866|ref|NP_001079589.1| Polyubiquitin-C-like [Xenopus laevis]
 gi|27924422|gb|AAH45004.1| MGC53081 protein [Xenopus laevis]
 gi|226469790|emb|CAX76725.1| ubiquitin C [Schistosoma japonicum]
 gi|226473054|emb|CAX71213.1| ubiquitin C [Schistosoma japonicum]
          Length = 380

 Score =  251 bits (641), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 150/363 (41%), Positives = 218/363 (60%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|73995130|ref|XP_853060.1| PREDICTED: polyubiquitin-C isoform 2 [Canis lupus familiaris]
 gi|149633339|ref|XP_001509120.1| PREDICTED: polyubiquitin-C [Ornithorhynchus anatinus]
 gi|194214411|ref|XP_001499132.2| PREDICTED: polyubiquitin [Equus caballus]
 gi|297263837|ref|XP_002798872.1| PREDICTED: hypothetical protein LOC712934 isoform 3 [Macaca
           mulatta]
 gi|344297276|ref|XP_003420325.1| PREDICTED: polyubiquitin-C-like [Loxodonta africana]
 gi|345791301|ref|XP_003433478.1| PREDICTED: polyubiquitin-C isoform 1 [Canis lupus familiaris]
 gi|390468353|ref|XP_003733926.1| PREDICTED: polyubiquitin-C-like [Callithrix jacchus]
 gi|343958420|dbj|BAK63065.1| ubiquitin [Pan troglodytes]
 gi|343959062|dbj|BAK63386.1| ubiquitin [Pan troglodytes]
 gi|431912123|gb|ELK14261.1| Ubiquitin [Pteropus alecto]
          Length = 381

 Score =  251 bits (640), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 150/363 (41%), Positives = 218/363 (60%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|346986309|ref|NP_001231310.1| polyubiquitin [Cricetulus griseus]
 gi|2118958|pir||S21083 polyubiquitin 5 - Chinese hamster
 gi|49477|emb|CAA42941.1| polyubiquitin [Cricetulus griseus]
 gi|25991946|gb|AAN76999.1| poly-ubiquitin [Biomphalaria glabrata]
          Length = 381

 Score =  251 bits (640), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 150/363 (41%), Positives = 218/363 (60%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|387916118|gb|AFK11668.1| polyubiquitin-like protein [Callorhinchus milii]
          Length = 381

 Score =  251 bits (640), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 151/363 (41%), Positives = 219/363 (60%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFVGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   + L  Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPLDQQCLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L + G +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFVGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   PL  Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPLDQQCLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|92790170|emb|CAI83754.1| Polyubiqutin 1 [Polyplastron multivesiculatum]
          Length = 379

 Score =  251 bits (640), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 153/363 (42%), Positives = 215/363 (59%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE  R L DY I+  STLH + +  
Sbjct: 13  LEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLR 72

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 73  GGMQIFVKTLTGKTITL-EVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTL 130

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 131 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQ 190

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED++TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 191 QRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTID 250

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 251 NVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 310

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+ +VK K+ DK   P   Q ++FAGK+L +N  LA YNIQK STLH
Sbjct: 311 TGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLH 370

Query: 354 MVL 356
           +VL
Sbjct: 371 LVL 373



 Score =  218 bits (555), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 142/375 (37%), Positives = 206/375 (54%), Gaps = 14/375 (3%)

Query: 64  LFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMN 123
           +FVK  T +T T+ E  P  T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+   N
Sbjct: 1   IFVKTLTGKTITL-EVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYN 58

Query: 124 IKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMI 183
           I+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I
Sbjct: 59  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLI 118

Query: 184 YEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKE 240
           + GK+LED++TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +VK 
Sbjct: 119 FAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKA 178

Query: 241 IVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKT 297
            + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKT
Sbjct: 179 KIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 238

Query: 298 ITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLA 357
           ITL+V+P +T+ +VK K+ DK   P   Q ++FAGK+L +N  LA YNIQK STLH+VL 
Sbjct: 239 ITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 298

Query: 358 PSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTL 411
               +          +I+L +  S+  +  K K Q         + L+     L+D+RTL
Sbjct: 299 LRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTL 358

Query: 412 ADYGMDLSEKVVLVF 426
           ADY +     + LV 
Sbjct: 359 ADYNIQKESTLHLVL 373


>gi|357611679|gb|EHJ67605.1| Ubc protein [Danaus plexippus]
          Length = 381

 Score =  251 bits (640), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 150/363 (41%), Positives = 218/363 (60%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|340374850|ref|XP_003385950.1| PREDICTED: polyubiquitin-like [Amphimedon queenslandica]
          Length = 381

 Score =  251 bits (640), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 150/363 (41%), Positives = 218/363 (60%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|195164963|ref|XP_002023315.1| GL20284 [Drosophila persimilis]
 gi|194105420|gb|EDW27463.1| GL20284 [Drosophila persimilis]
          Length = 382

 Score =  251 bits (640), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 150/363 (41%), Positives = 218/363 (60%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|226477448|emb|CAX72418.1| ubiquitin C [Schistosoma japonicum]
 gi|226484005|emb|CAX79671.1| ubiquitin C [Schistosoma japonicum]
          Length = 381

 Score =  251 bits (640), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 150/363 (41%), Positives = 218/363 (60%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|149535948|ref|XP_001508553.1| PREDICTED: polyubiquitin-C-like [Ornithorhynchus anatinus]
 gi|149641796|ref|XP_001508904.1| PREDICTED: polyubiquitin-C-like [Ornithorhynchus anatinus]
 gi|301770987|ref|XP_002920911.1| PREDICTED: hypothetical protein LOC100483436 isoform 1 [Ailuropoda
           melanoleuca]
 gi|301770989|ref|XP_002920912.1| PREDICTED: hypothetical protein LOC100483436 isoform 2 [Ailuropoda
           melanoleuca]
 gi|197129062|gb|ACH45560.1| putative ubiquitin C variant 7 [Taeniopygia guttata]
 gi|197129063|gb|ACH45561.1| putative ubiquitin C variant 7 [Taeniopygia guttata]
          Length = 381

 Score =  250 bits (639), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 150/363 (41%), Positives = 218/363 (60%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|73695428|gb|AAI03478.1| Ubc protein [Rattus norvegicus]
          Length = 430

 Score =  250 bits (639), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 150/363 (41%), Positives = 218/363 (60%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 128/319 (40%), Positives = 185/319 (57%), Gaps = 9/319 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVK 312
            GKTITLDV+P    + VK
Sbjct: 389 TGKTITLDVEPSVNTKKVK 407



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/244 (40%), Positives = 146/244 (59%), Gaps = 6/244 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE  +  +
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVNTK 404

Query: 237 DVKE 240
            VK+
Sbjct: 405 KVKQ 408


>gi|92790148|emb|CAI83743.1| Polyubiqutin 3 [Dasytricha ruminantium]
          Length = 363

 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 150/358 (41%), Positives = 214/358 (59%), Gaps = 9/358 (2%)

Query: 6   SEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKL 64
           S+ I+N+KA I  KEGI  D   L FAG +LE  R L DY I+  STLH + +    M++
Sbjct: 2   SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQI 61

Query: 65  FVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNI 124
           FVK  T +T T+ +  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI
Sbjct: 62  FVKTLTGKTITL-DVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNI 119

Query: 125 KSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIY 184
           + ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+      +I+
Sbjct: 120 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIF 179

Query: 185 EGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEI 241
            GK+LED++TLA Y+++ E  L +       +QIFV+T   + + L+VE    + +VK  
Sbjct: 180 AGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAK 239

Query: 242 VANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTI 298
           + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTI
Sbjct: 240 IQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 299

Query: 299 TLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           TLDV+P +T+++VK K+ DK   P   Q ++FAGK+L +N  LA YNIQK STLH+VL
Sbjct: 300 TLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVL 357



 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 135/358 (37%), Positives = 198/358 (55%), Gaps = 13/358 (3%)

Query: 81  PYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEIL 140
           P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +  +
Sbjct: 1   PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNIQKESTLHLVLRLRGGM 59

Query: 141 SIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDM 200
            IFVK  TG+ + L+V+ S  I +VKA +    G+      +I+ GK+LED++TLA Y++
Sbjct: 60  QIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNI 119

Query: 201 KDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFY 257
           + E  L +       +QIFV+T   + + L+VE    + +VK  + +   +    Q L +
Sbjct: 120 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIF 179

Query: 258 AGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVK 314
           AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITLDV+P +T+++VK K
Sbjct: 180 AGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAK 239

Query: 315 LFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSI 374
           + DK   P   Q ++FAGK+L +N  LA YNIQK STLH+VL     +          +I
Sbjct: 240 IQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 299

Query: 375 SLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           +L +  S+  E  K K Q         + L+     L+D+RTLADY +     + LV 
Sbjct: 300 TLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVL 357



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 108/283 (38%), Positives = 162/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I+N+KA I  KEGI  D   L FAG +LE  R L DY I+  STLH + +  
Sbjct: 73  LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLR 132

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T ++  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 133 GGMQIFVKTLTGKTIT-LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTL 190

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+    
Sbjct: 191 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQ 250

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED++TLA Y+++ E  L +       +QIFV+T   + + L+VE    + 
Sbjct: 251 QRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIE 310

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 311 NVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTL 353


>gi|302393779|sp|P42740.2|UBIQP_AGLNE RecName: Full=Polyubiquitin; Contains: RecName:
           Full=Ubiquitin-related 1; Contains: RecName:
           Full=Ubiquitin; Contains: RecName:
           Full=Ubiquitin-related 2; Contains: RecName:
           Full=Ubiquitin-related 3; Flags: Precursor
 gi|166336|gb|AAA72126.1| polyubiquitin [Aglaothamnion neglectum]
 gi|445141|prf||1908440A poly-ubiquitin
          Length = 457

 Score =  249 bits (637), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 162/439 (36%), Positives = 242/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY  +  STLH + +  
Sbjct: 15  LEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNNQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTITGKTITLEVESSDTIENVKTKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y ++    L +   L    QIFVKT 
Sbjct: 253 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNLQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/299 (34%), Positives = 157/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
            + E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  NQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTITGKTITLEVESSDTIENVKT 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNLQKESTLHLVL 299


>gi|124377858|tpd|FAA00319.1| TPA: polyubiquitin [Cryptococcus neoformans var. neoformans
           B-3501A]
          Length = 456

 Score =  249 bits (637), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 164/439 (37%), Positives = 241/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 136/377 (36%), Positives = 204/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|389742108|gb|EIM83295.1| polyubiquitin [Stereum hirsutum FP-91666 SS1]
 gi|449546777|gb|EMD37746.1| polyubiquitin [Ceriporiopsis subvermispora B]
 gi|449550837|gb|EMD41801.1| polyubiquitin [Ceriporiopsis subvermispora B]
          Length = 457

 Score =  249 bits (637), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 164/439 (37%), Positives = 241/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 136/377 (36%), Positives = 204/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|58260904|ref|XP_567862.1| ATP-dependent protein binding protein [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|134116983|ref|XP_772718.1| hypothetical protein CNBK0920 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50255336|gb|EAL18071.1| hypothetical protein CNBK0920 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229943|gb|AAW46345.1| ATP-dependent protein binding protein, putative [Cryptococcus
           neoformans var. neoformans JEC21]
          Length = 457

 Score =  249 bits (637), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 164/439 (37%), Positives = 241/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 136/377 (36%), Positives = 204/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|324514657|gb|ADY45941.1| Polyubiquitin-A, partial [Ascaris suum]
          Length = 474

 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 164/433 (37%), Positives = 242/433 (55%), Gaps = 10/433 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAAVKELLVDQVALQDDRTLAD 413
           +VL     +          +I+L +  S+  E  K K Q   + +  DQ  L    TL+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK-EGIPPDQQRLIFAGTLSD 431

Query: 414 YGMDLSEKVVLVF 426
           Y +     + LV 
Sbjct: 432 YNIQKESTLHLVL 444



 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 137/377 (36%), Positives = 206/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 122/317 (38%), Positives = 181/317 (57%), Gaps = 16/317 (5%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AGT       L+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGT-------LSDYNIQKESTLHLVLRLRGGMQIFVKTL 457

Query: 294 GGKTITLDVQPYNTVQD 310
            GKTITL+V+  +T+++
Sbjct: 458 TGKTITLEVEASDTIEN 474


>gi|197129067|gb|ACH45565.1| putative ubiquitin C variant 12 [Taeniopygia guttata]
          Length = 381

 Score =  249 bits (635), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 149/363 (41%), Positives = 218/363 (60%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  D+  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDKQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDKQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|226484007|emb|CAX79672.1| ubiquitin C [Schistosoma japonicum]
          Length = 381

 Score =  248 bits (634), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 149/363 (41%), Positives = 218/363 (60%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  +I+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYHIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 207/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y ++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYHIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|395295|emb|CAA52290.1| polyubiquitin [Volvox carteri f. nagariensis]
          Length = 381

 Score =  248 bits (634), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 151/363 (41%), Positives = 215/363 (59%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 141/377 (37%), Positives = 205/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|157093211|gb|ABV22260.1| polyubiquitin [Karlodinium micrum]
          Length = 536

 Score =  248 bits (633), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 163/428 (38%), Positives = 238/428 (55%), Gaps = 17/428 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
             M++FVK  T +T T+ VEA    T+ N+K  IQ KEGI  DQ  L++ GK L ED  T
Sbjct: 75  GGMQIFVKTLTGKTITLDVEA--SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 131

Query: 119 MTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAA 178
           ++  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+   
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIDNVKAKIQDKEGIPPD 191

Query: 179 DHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVV 235
              +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    +
Sbjct: 192 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTI 251

Query: 236 RDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKT 292
            +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT
Sbjct: 252 DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKT 311

Query: 293 WGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTL 352
             GKTITLDV+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STL
Sbjct: 312 LTGKTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 371

Query: 353 HMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQ 406
           H+VL     +          +I+L +  S+  +  K K Q         + L+     L+
Sbjct: 372 HLVLRLRGGMQIFVKTLTGKTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 431

Query: 407 DDRTLADY 414
           D RTL+DY
Sbjct: 432 DGRTLSDY 439



 Score =  248 bits (633), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 163/428 (38%), Positives = 238/428 (55%), Gaps = 17/428 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
             M++FVK  T +T T+ VEA    T+ N+K  IQ KEGI  DQ  L++ GK L ED  T
Sbjct: 151 GGMQIFVKTLTGKTITLDVEA--SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 207

Query: 119 MTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAA 178
           ++  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+   
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIDNVKAKIQDKEGIPPD 267

Query: 179 DHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVV 235
              +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    +
Sbjct: 268 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTI 327

Query: 236 RDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKT 292
            +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT
Sbjct: 328 DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKT 387

Query: 293 WGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTL 352
             GKTITLDV+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STL
Sbjct: 388 LTGKTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 447

Query: 353 HMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQ 406
           H+VL     +          +I+L +  S+  +  K K Q         + L+     L+
Sbjct: 448 HLVLRLRGGMQIFVKTLTGKTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 507

Query: 407 DDRTLADY 414
           D RTL+DY
Sbjct: 508 DGRTLSDY 515



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 149/364 (40%), Positives = 214/364 (58%), Gaps = 11/364 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
             M++FVK  T +T T+ VEA    T+ N+K  IQ KEGI  DQ  L++ GK L ED  T
Sbjct: 227 GGMQIFVKTLTGKTITLDVEA--SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 283

Query: 119 MTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAA 178
           ++  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+   
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIDNVKAKIQDKEGIPPD 343

Query: 179 DHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVV 235
              +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    +
Sbjct: 344 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTI 403

Query: 236 RDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKT 292
            +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT
Sbjct: 404 DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKT 463

Query: 293 WGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTL 352
             GKTITLDV+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STL
Sbjct: 464 LTGKTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 523

Query: 353 HMVL 356
           H+VL
Sbjct: 524 HLVL 527



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 135/366 (36%), Positives = 202/366 (55%), Gaps = 16/366 (4%)

Query: 62  MKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMT 120
           M++FVK  T +T T+ VEA    T+ N+K  IQ KEGI  DQ  L++ GK L ED  T++
Sbjct: 1   MQIFVKTLTGKTITLDVEA--SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLS 57

Query: 121 SMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADH 180
             NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+     
Sbjct: 58  DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIDNVKAKIQDKEGIPPDQQ 117

Query: 181 IMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRD 237
            +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + +
Sbjct: 118 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIDN 177

Query: 238 VKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWG 294
           VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  
Sbjct: 178 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLT 237

Query: 295 GKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHM 354
           GKTITLDV+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+
Sbjct: 238 GKTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297

Query: 355 VLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDD 408
           VL     +          +I+L +  S+  +  K K Q         + L+     L+D 
Sbjct: 298 VLRLRGGMQIFVKTLTGKTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDG 357

Query: 409 RTLADY 414
           RTL+DY
Sbjct: 358 RTLSDY 363


>gi|124805744|ref|XP_001350526.1| polyubiquitin [Plasmodium falciparum 3D7]
 gi|6138833|emb|CAB59728.1| Polyubiquitin [Plasmodium falciparum 3D7]
 gi|23496650|gb|AAN36206.1| polyubiquitin [Plasmodium falciparum 3D7]
          Length = 381

 Score =  248 bits (633), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 148/363 (40%), Positives = 217/363 (59%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ +  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-DVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITLDV+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  214 bits (546), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 137/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-DVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITLDV+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|56754831|gb|AAW25598.1| unknown [Schistosoma japonicum]
          Length = 381

 Score =  248 bits (633), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 149/363 (41%), Positives = 217/363 (59%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q   +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIHDKEGIPPDQQRSIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 207/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q  +FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIHDKEGIPPDQQRSIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|148687613|gb|EDL19560.1| ubiquitin C, isoform CRA_a [Mus musculus]
 gi|148687614|gb|EDL19561.1| ubiquitin C, isoform CRA_a [Mus musculus]
          Length = 614

 Score =  248 bits (632), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 167/471 (35%), Positives = 246/471 (52%), Gaps = 47/471 (9%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM------------------------------- 208
             +I+ GK+LED +TL+ Y+++ E  L +                               
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTINYNIQKESTLH 252

Query: 209 ----FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEA 264
                   +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE 
Sbjct: 253 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 312

Query: 265 CKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQT 321
            +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   
Sbjct: 313 GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 372

Query: 322 PLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISIS 381
           P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S
Sbjct: 373 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPS 432

Query: 382 EVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           +  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 433 DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 483



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 168/471 (35%), Positives = 247/471 (52%), Gaps = 47/471 (9%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVN-------------------------- 153
           +  NI+ ES +HLV   +  + IFVK  TG+ +N                          
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTINYNIQKESTLHLVLRLRGGMQIFVKTL 268

Query: 154 ------LEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLE 207
                 LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+++ E  L 
Sbjct: 269 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 328

Query: 208 M---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEA 264
           +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE 
Sbjct: 329 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 388

Query: 265 CKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQT 321
            +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   
Sbjct: 389 GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 448

Query: 322 PLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISIS 381
           P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S
Sbjct: 449 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPS 508

Query: 382 EVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           +  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 509 DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 559



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 129/319 (40%), Positives = 186/319 (58%), Gaps = 9/319 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 275 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 334

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 335 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 392

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 393 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 452

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 453 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 512

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 513 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 572

Query: 294 GGKTITLDVQPYNTVQDVK 312
            GKTITLDV+P  T + VK
Sbjct: 573 TGKTITLDVEPSVTTKKVK 591



 Score =  204 bits (519), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 139/409 (33%), Positives = 208/409 (50%), Gaps = 46/409 (11%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV----------------- 281
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +                 
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 282 ------------------LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPL 323
                             L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P 
Sbjct: 239 KTINYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 298

Query: 324 HLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEV 383
             Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+ 
Sbjct: 299 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 358

Query: 384 KEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
            E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 359 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 407



 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 98/244 (40%), Positives = 146/244 (59%), Gaps = 6/244 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 351 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 410

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 411 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 468

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 469 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 528

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE  +  +
Sbjct: 529 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVTTK 588

Query: 237 DVKE 240
            VK+
Sbjct: 589 KVKQ 592


>gi|50423807|ref|XP_460488.1| DEHA2F02816p [Debaryomyces hansenii CBS767]
 gi|210076178|ref|XP_504128.2| YALI0E18986p [Yarrowia lipolytica]
 gi|49656157|emb|CAG88798.1| DEHA2F02816p [Debaryomyces hansenii CBS767]
 gi|199426939|emb|CAG79723.2| YALI0E18986p [Yarrowia lipolytica CLIB122]
 gi|392574761|gb|EIW67896.1| hypothetical protein TREMEDRAFT_44902 [Tremella mesenterica DSM
           1558]
          Length = 457

 Score =  247 bits (630), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 162/439 (36%), Positives = 242/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 135/377 (35%), Positives = 205/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|156841217|ref|XP_001643983.1| hypothetical protein Kpol_1070p6 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156114615|gb|EDO16125.1| hypothetical protein Kpol_1070p6 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 533

 Score =  247 bits (630), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 162/439 (36%), Positives = 242/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  247 bits (630), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 162/439 (36%), Positives = 242/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 135/377 (35%), Positives = 205/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|66804955|ref|XP_636210.1| hypothetical protein DDB_G0289449 [Dictyostelium discoideum AX4]
 gi|302595960|sp|P0CG78.1|UBIQF_DICDI RecName: Full=Polyubiquitin-F; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|167947|gb|AAA33267.1| ubiquitin [Dictyostelium discoideum]
 gi|60464567|gb|EAL62704.1| hypothetical protein DDB_G0289449 [Dictyostelium discoideum AX4]
          Length = 533

 Score =  247 bits (630), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 163/439 (37%), Positives = 242/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E      ++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  + +++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  247 bits (630), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 163/439 (37%), Positives = 242/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E      ++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  + +++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 135/377 (35%), Positives = 204/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E      ++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  + +++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|50286405|ref|XP_445631.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524936|emb|CAG58542.1| unnamed protein product [Candida glabrata]
          Length = 533

 Score =  247 bits (630), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 162/439 (36%), Positives = 242/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  247 bits (630), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 162/439 (36%), Positives = 242/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 135/377 (35%), Positives = 205/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|254585537|ref|XP_002498336.1| ZYRO0G07854p [Zygosaccharomyces rouxii]
 gi|238941230|emb|CAR29403.1| ZYRO0G07854p [Zygosaccharomyces rouxii]
          Length = 460

 Score =  247 bits (630), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 160/427 (37%), Positives = 238/427 (55%), Gaps = 15/427 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADY 414
            RTL+DY
Sbjct: 433 GRTLSDY 439



 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 146/363 (40%), Positives = 214/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVL 356
           +VL
Sbjct: 449 LVL 451



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 133/365 (36%), Positives = 201/365 (55%), Gaps = 14/365 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADY 414
           TL+DY
Sbjct: 359 TLSDY 363


>gi|260600300|gb|ACX46987.1| ubiquitin [Guzmania wittmackii x Guzmania lingulata]
          Length = 441

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 157/399 (39%), Positives = 224/399 (56%), Gaps = 9/399 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPEQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ 392
           +VL     +          +I+L +  S+  +  K K Q
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 411



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 138/347 (39%), Positives = 199/347 (57%), Gaps = 9/347 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  +Q  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPEQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHV 340
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +  V
Sbjct: 389 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGLV 435



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPEQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|3776536|gb|AAC64787.1| polyubiquitin [Schizosaccharomyces pombe]
          Length = 610

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 160/427 (37%), Positives = 238/427 (55%), Gaps = 15/427 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADY 414
            RTL+DY
Sbjct: 433 GRTLSDY 439



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 160/427 (37%), Positives = 238/427 (55%), Gaps = 15/427 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADY 414
            RTL+DY
Sbjct: 509 GRTLSDY 515



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 160/427 (37%), Positives = 238/427 (55%), Gaps = 15/427 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADY 414
            RTL+DY
Sbjct: 585 GRTLSDY 591



 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 146/363 (40%), Positives = 214/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVL 356
           +VL
Sbjct: 601 LVL 603



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 133/365 (36%), Positives = 201/365 (55%), Gaps = 14/365 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADY 414
           TL+DY
Sbjct: 359 TLSDY 363


>gi|114159828|gb|ABI53721.1| polyubiquitin [Pyropia yezoensis]
          Length = 457

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 160/427 (37%), Positives = 238/427 (55%), Gaps = 15/427 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADY 414
            RTL+DY
Sbjct: 433 GRTLSDY 439



 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 146/363 (40%), Positives = 214/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVL 356
           +VL
Sbjct: 449 LVL 451



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 133/365 (36%), Positives = 201/365 (55%), Gaps = 14/365 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADY 414
           TL+DY
Sbjct: 359 TLSDY 363


>gi|320580936|gb|EFW95158.1| Ubiquitin C variant [Ogataea parapolymorpha DL-1]
          Length = 761

 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 160/427 (37%), Positives = 238/427 (55%), Gaps = 15/427 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADY 414
            RTL+DY
Sbjct: 433 GRTLSDY 439



 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 160/427 (37%), Positives = 238/427 (55%), Gaps = 15/427 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADY 414
            RTL+DY
Sbjct: 509 GRTLSDY 515



 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 160/427 (37%), Positives = 238/427 (55%), Gaps = 15/427 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADY 414
            RTL+DY
Sbjct: 585 GRTLSDY 591



 Score =  245 bits (625), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 158/427 (37%), Positives = 239/427 (55%), Gaps = 15/427 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  + + Q         + L+   + L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVESEIQDKEGIPPDQRRLIFAGMQLED 660

Query: 408 DRTLADY 414
            RTL+DY
Sbjct: 661 GRTLSDY 667



 Score =  239 bits (609), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 156/427 (36%), Positives = 237/427 (55%), Gaps = 15/427 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 319 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 379 GGMQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 436

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 437 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 496

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 497 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 556

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 557 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 616

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +V+ ++ DK   P   + ++FAG +L +   L+ YNIQK STLH
Sbjct: 617 TGKTITLEVESSDTIDNVESEIQDKEGIPPDQRRLIFAGMQLEDGRTLSDYNIQKESTLH 676

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 677 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLED 736

Query: 408 DRTLADY 414
            RTL+DY
Sbjct: 737 GRTLSDY 743



 Score =  235 bits (600), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 144/363 (39%), Positives = 214/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 395 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 454

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 455 GGMQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 512

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 513 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 572

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 573 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 632

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +V+  + +   +    + L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 633 NVESEIQDKEGIPPDQRRLIFAGMQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 692

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 693 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 752

Query: 354 MVL 356
           +VL
Sbjct: 753 LVL 755



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 133/365 (36%), Positives = 201/365 (55%), Gaps = 14/365 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADY 414
           TL+DY
Sbjct: 359 TLSDY 363


>gi|146421245|ref|XP_001486573.1| ubiquitin [Meyerozyma guilliermondii ATCC 6260]
 gi|146389988|gb|EDK38146.1| ubiquitin [Meyerozyma guilliermondii ATCC 6260]
          Length = 457

 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 162/439 (36%), Positives = 242/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 135/377 (35%), Positives = 205/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|114159830|gb|ABI53722.1| polyubiquitin [Pyropia yezoensis]
          Length = 533

 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 162/439 (36%), Positives = 241/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKLKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 162/439 (36%), Positives = 242/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKLKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 135/377 (35%), Positives = 206/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK+K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKLKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|15982787|gb|AAL09741.1| AT4g05320/C17L7_240 [Arabidopsis thaliana]
          Length = 381

 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 151/363 (41%), Positives = 212/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLSLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  211 bits (536), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 141/377 (37%), Positives = 204/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEMFPS---SIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +  S    +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLSLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|449662449|ref|XP_004205543.1| PREDICTED: polyubiquitin-B-like isoform 1 [Hydra magnipapillata]
 gi|449665888|ref|XP_002158413.2| PREDICTED: polyubiquitin-like [Hydra magnipapillata]
          Length = 380

 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 148/363 (40%), Positives = 216/363 (59%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ ++ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEAADTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPADTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ +  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPADTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPADTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPADTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  207 bits (528), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 135/377 (35%), Positives = 206/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEAADTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ +  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPADTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPADTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPADTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  ++  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPADTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|7267292|emb|CAB81074.1| polyubiquitin (ubq10) [Arabidopsis thaliana]
          Length = 464

 Score =  245 bits (626), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 157/399 (39%), Positives = 224/399 (56%), Gaps = 9/399 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ 392
           +VL     +          +I+L +  S+  +  K K Q
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 411



 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375



 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 131/325 (40%), Positives = 187/325 (57%), Gaps = 9/325 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDK 318
            GKTITL+V+  +T+ +VK K+ DK
Sbjct: 389 TGKTITLEVESSDTIDNVKAKIQDK 413


>gi|162461367|ref|NP_001105376.1| polyubiquitin [Zea mays]
 gi|899608|gb|AAC49025.1| polyubiquitin [Zea mays]
          Length = 381

 Score =  245 bits (625), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 151/363 (41%), Positives = 212/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVVRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           +     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 VRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|23397122|gb|AAN31845.1| putative polyubiquitin (UBQ10) [Arabidopsis thaliana]
          Length = 464

 Score =  245 bits (625), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 157/399 (39%), Positives = 224/399 (56%), Gaps = 9/399 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ 392
           +VL     +          +I+L +  S+  +  K K Q
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 411



 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375



 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 132/329 (40%), Positives = 188/329 (57%), Gaps = 9/329 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTP 322
            GKTITL+V+  +T+ +VK K+ DK   P
Sbjct: 389 TGKTITLEVESSDTIDNVKAKIQDKEGIP 417



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/103 (45%), Positives = 62/103 (60%), Gaps = 2/103 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 319 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 378

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQ 102
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ
Sbjct: 379 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQ 420


>gi|116312012|emb|CAJ86369.1| OSIGBa0117N13.13 [Oryza sativa Indica Group]
 gi|116312055|emb|CAJ86419.1| H0303G06.8 [Oryza sativa Indica Group]
 gi|125549841|gb|EAY95663.1| hypothetical protein OsI_17529 [Oryza sativa Indica Group]
          Length = 381

 Score =  245 bits (625), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 151/363 (41%), Positives = 212/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  211 bits (536), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|297724233|ref|NP_001174480.1| Os05g0504766 [Oryza sativa Japonica Group]
 gi|242096828|ref|XP_002438904.1| hypothetical protein SORBIDRAFT_10g028020 [Sorghum bicolor]
 gi|4809266|gb|AAD30173.1|AF148448_1 polyubiquitin [Sporobolus stapfianus]
 gi|57863866|gb|AAW56906.1| polyubiquitin [Oryza sativa Japonica Group]
 gi|125552905|gb|EAY98614.1| hypothetical protein OsI_20535 [Oryza sativa Indica Group]
 gi|222632152|gb|EEE64284.1| hypothetical protein OsJ_19121 [Oryza sativa Japonica Group]
 gi|241917127|gb|EER90271.1| hypothetical protein SORBIDRAFT_10g028020 [Sorghum bicolor]
 gi|255676474|dbj|BAH93208.1| Os05g0504766 [Oryza sativa Japonica Group]
 gi|326510917|dbj|BAJ91806.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326521968|dbj|BAK04112.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|383843954|gb|AFH53939.1| polyubiquitin 4 [Brachypodium distachyon]
 gi|383843956|gb|AFH53940.1| polyubiquitin 10 [Brachypodium distachyon]
          Length = 381

 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 151/363 (41%), Positives = 212/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  211 bits (536), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|240255756|ref|NP_849300.4| polyubiquitin 10 [Arabidopsis thaliana]
 gi|240255762|ref|NP_567291.4| polyubiquitin 10 [Arabidopsis thaliana]
 gi|240255764|ref|NP_001078353.4| polyubiquitin 10 [Arabidopsis thaliana]
 gi|224132654|ref|XP_002327848.1| predicted protein [Populus trichocarpa]
 gi|449433926|ref|XP_004134747.1| PREDICTED: polyubiquitin-like isoform 1 [Cucumis sativus]
 gi|449433928|ref|XP_004134748.1| PREDICTED: polyubiquitin-like isoform 2 [Cucumis sativus]
 gi|302393785|sp|P69322.2|UBIQP_PEA RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|20589|emb|CAA34886.1| unnamed protein product [Pisum sativum]
 gi|4115339|gb|AAD03344.1| ubiquitin [Pisum sativum]
 gi|15450661|gb|AAK96602.1| AT4g05320/C17L7_240 [Arabidopsis thaliana]
 gi|49532982|dbj|BAD26592.1| polyubiquitin [Populus nigra]
 gi|82409051|gb|ABB73307.1| ubiquitin [Lotus japonicus]
 gi|118481117|gb|ABK92512.1| unknown [Populus trichocarpa]
 gi|118482690|gb|ABK93264.1| unknown [Populus trichocarpa]
 gi|118488167|gb|ABK95903.1| unknown [Populus trichocarpa]
 gi|118488391|gb|ABK96012.1| unknown [Populus trichocarpa]
 gi|118488630|gb|ABK96127.1| unknown [Populus trichocarpa]
 gi|217874292|gb|ACK56276.1| ubiquitin [Populus trichocarpa]
 gi|222837257|gb|EEE75636.1| predicted protein [Populus trichocarpa]
 gi|332657101|gb|AEE82501.1| polyubiquitin 10 [Arabidopsis thaliana]
 gi|332657104|gb|AEE82504.1| polyubiquitin 10 [Arabidopsis thaliana]
 gi|332657105|gb|AEE82505.1| polyubiquitin 10 [Arabidopsis thaliana]
 gi|226707|prf||1603402A poly-ubiquitin
          Length = 381

 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 151/363 (41%), Positives = 212/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  211 bits (536), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|18420267|ref|NP_568397.1| polyubiquitin 4 [Arabidopsis thaliana]
 gi|297826781|ref|XP_002881273.1| hypothetical protein ARALYDRAFT_482268 [Arabidopsis lyrata subsp.
           lyrata]
 gi|302595977|sp|P0CH32.1|UBQ4_ARATH RecName: Full=Polyubiquitin 4; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|17678|emb|CAA31331.1| unnamed protein product [Arabidopsis thaliana]
 gi|987519|gb|AAB53929.1| polyubiquitin [Arabidopsis thaliana]
 gi|297327112|gb|EFH57532.1| hypothetical protein ARALYDRAFT_482268 [Arabidopsis lyrata subsp.
           lyrata]
 gi|332005484|gb|AED92867.1| polyubiquitin 4 [Arabidopsis thaliana]
 gi|226499|prf||1515347A poly-ubiquitin
          Length = 382

 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 151/363 (41%), Positives = 212/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  211 bits (536), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|241740196|gb|ACS68205.1| ubiquitin 10.2 [Brassica napus]
          Length = 381

 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 151/363 (41%), Positives = 212/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  211 bits (536), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|155965254|gb|ABU40645.1| polyubiquitin [Triticum aestivum]
          Length = 380

 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 151/363 (41%), Positives = 212/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  211 bits (536), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|226502871|ref|NP_001148453.1| LOC100282068 [Zea mays]
 gi|224059606|ref|XP_002299930.1| predicted protein [Populus trichocarpa]
 gi|357474771|ref|XP_003607671.1| Ubiquitin [Medicago truncatula]
 gi|902586|gb|AAC49014.1| ubiquitin [Zea mays]
 gi|195619382|gb|ACG31521.1| polyubiquitin containing 7 ubiquitin monomers [Zea mays]
 gi|222847188|gb|EEE84735.1| predicted protein [Populus trichocarpa]
 gi|238013752|gb|ACR37911.1| unknown [Zea mays]
 gi|355508726|gb|AES89868.1| Ubiquitin [Medicago truncatula]
 gi|413926508|gb|AFW66440.1| putative ubiquitin family protein isoform 1 [Zea mays]
 gi|413926509|gb|AFW66441.1| putative ubiquitin family protein isoform 2 [Zea mays]
          Length = 381

 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 151/363 (41%), Positives = 212/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  211 bits (536), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|297812245|ref|XP_002874006.1| hypothetical protein ARALYDRAFT_488966 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297319843|gb|EFH50265.1| hypothetical protein ARALYDRAFT_488966 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 382

 Score =  244 bits (624), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 151/363 (41%), Positives = 212/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQVFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|225465625|ref|XP_002267452.1| PREDICTED: polyubiquitin 4-like isoform 1 [Vitis vinifera]
 gi|359488113|ref|XP_003633702.1| PREDICTED: polyubiquitin 4-like isoform 2 [Vitis vinifera]
          Length = 386

 Score =  244 bits (624), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 151/363 (41%), Positives = 212/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  211 bits (536), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|68160568|gb|AAY86773.1| polyubiquitin [Noccaea caerulescens]
          Length = 382

 Score =  244 bits (624), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 151/363 (41%), Positives = 212/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  211 bits (536), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|224160432|ref|XP_002338212.1| predicted protein [Populus trichocarpa]
 gi|222871285|gb|EEF08416.1| predicted protein [Populus trichocarpa]
          Length = 377

 Score =  244 bits (624), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 151/363 (41%), Positives = 212/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|302393778|sp|P42739.2|UBIQP_ACECL RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Contains: RecName: Full=Ubiquitin-related 1; Contains:
           RecName: Full=Ubiquitin-related 2; Flags: Precursor
 gi|433970|emb|CAA82268.1| polyubiquitin [Acetabularia peniculus]
          Length = 423

 Score =  244 bits (624), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 150/363 (41%), Positives = 215/363 (59%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAG-RLVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ ++N+K+ I  KEGI  D   L FAG +LE G  L DY I+  STLH + +  
Sbjct: 56  LEVQSSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGLTLADYNIQKESTLHLVLRLR 115

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     TV+N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 116 GGMQIFVKTLTGKTITL-EVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 173

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  + +VK+ +    G+    
Sbjct: 174 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQ 233

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    V 
Sbjct: 234 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTVE 293

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 294 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 353

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +TV++VK K+ DK   P   Q I+FAGK+L +   LA YNIQK STLH
Sbjct: 354 TGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRIIFAGKQLEDGRTLADYNIQKESTLH 413

Query: 354 MVL 356
           +VL
Sbjct: 414 LVL 416



 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 159/418 (38%), Positives = 228/418 (54%), Gaps = 15/418 (3%)

Query: 22  ISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAM 80
           I  D   L FAG +LE GR L DY I+  STLH + +    M++FVK  T +T T +E  
Sbjct: 1   IPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT-LEVQ 59

Query: 81  PYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEIL 140
              TV+N+K+ IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +  +
Sbjct: 60  SSDTVENVKSKIQDKEGIPPDQQRLIFAGKQL-EDGLTLADYNIQKESTLHLVLRLRGGM 118

Query: 141 SIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDM 200
            IFVK  TG+ + LEV+ S  + +VK+ +    G+      +I+ GK+LED +TLA Y++
Sbjct: 119 QIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 178

Query: 201 KDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFY 257
           + E  L +       +QIFV+T   + + LEVE    V +VK  + +   +    Q L +
Sbjct: 179 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIF 238

Query: 258 AGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVK 314
           AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +TV++VK K
Sbjct: 239 AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTVENVKSK 298

Query: 315 LFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSI 374
           + DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +I
Sbjct: 299 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 358

Query: 375 SLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           +L +  S+  E  K K Q         + ++     L+D RTLADY +     + LV 
Sbjct: 359 TLEVESSDTVENVKSKIQDKEGIPPDQQRIIFAGKQLEDGRTLADYNIQKESTLHLVL 416


>gi|255081913|ref|XP_002508175.1| ubiquitin [Micromonas sp. RCC299]
 gi|303285332|ref|XP_003061956.1| ubiquitin [Micromonas pusilla CCMP1545]
 gi|226456367|gb|EEH53668.1| ubiquitin [Micromonas pusilla CCMP1545]
 gi|226523451|gb|ACO69433.1| ubiquitin [Micromonas sp. RCC299]
          Length = 381

 Score =  244 bits (624), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 151/363 (41%), Positives = 212/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  211 bits (536), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|4150912|emb|CAA72799.1| polyubiquitin precursor [Suberites domuncula]
          Length = 381

 Score =  244 bits (624), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 148/363 (40%), Positives = 216/363 (59%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 137/377 (36%), Positives = 206/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|225465609|ref|XP_002266370.1| PREDICTED: polyubiquitin 4-like [Vitis vinifera]
          Length = 383

 Score =  244 bits (624), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 151/363 (41%), Positives = 212/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  210 bits (535), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|302595954|sp|P0CG84.1|UBI4P_NICSY RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|170354|gb|AAA34124.1| pentameric polyubiquitin, partial [Nicotiana sylvestris]
          Length = 377

 Score =  244 bits (624), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 151/363 (41%), Positives = 212/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 11  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 70

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 71  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 128

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 129 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 188

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 189 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 248

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 249 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 308

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 309 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 368

Query: 354 MVL 356
           +VL
Sbjct: 369 LVL 371



 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 138/373 (36%), Positives = 199/373 (53%), Gaps = 14/373 (3%)

Query: 66  VKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIK 125
           VK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI+
Sbjct: 1   VKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQ 58

Query: 126 SESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYE 185
            ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ 
Sbjct: 59  KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 118

Query: 186 GKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIV 242
           GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  +
Sbjct: 119 GKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 178

Query: 243 ANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTIT 299
            +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTIT
Sbjct: 179 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 238

Query: 300 LDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPS 359
           L+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL   
Sbjct: 239 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 298

Query: 360 SRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLAD 413
             +          +I+L +  S+  +  K K Q         + L+     L+D RTLAD
Sbjct: 299 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 358

Query: 414 YGMDLSEKVVLVF 426
           Y +     + LV 
Sbjct: 359 YNIQKESTLHLVL 371


>gi|393912432|gb|EJD76736.1| polyubiquitin, variant 1 [Loa loa]
          Length = 381

 Score =  244 bits (624), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 148/363 (40%), Positives = 216/363 (59%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 137/377 (36%), Positives = 206/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|145352566|ref|XP_001420612.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580847|gb|ABO98905.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 381

 Score =  244 bits (624), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 151/363 (41%), Positives = 212/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  211 bits (536), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|2894308|emb|CAA11269.1| polyubiquitin [Nicotiana tabacum]
          Length = 381

 Score =  244 bits (623), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 149/363 (41%), Positives = 214/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK+ + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 205/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K+ + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|312080345|ref|XP_003142560.1| ubiquitin C II [Loa loa]
 gi|393912431|gb|EJD76735.1| polyubiquitin [Loa loa]
          Length = 398

 Score =  244 bits (623), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 148/363 (40%), Positives = 216/363 (59%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 32  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 91

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 92  GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 149

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 150 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 209

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 210 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 269

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 270 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 329

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 330 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 389

Query: 354 MVL 356
           +VL
Sbjct: 390 LVL 392



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 139/391 (35%), Positives = 213/391 (54%), Gaps = 15/391 (3%)

Query: 49  NSTLHFLHQNL-SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVY 107
            S   +L +++ + M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++
Sbjct: 4   GSNFSYLQRSIITNMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIF 62

Query: 108 DGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKA 167
            GK L ED  T++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA
Sbjct: 63  AGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 121

Query: 168 IVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEI 224
            +    G+      +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + 
Sbjct: 122 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 181

Query: 225 VRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV--- 281
           + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   
Sbjct: 182 ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 241

Query: 282 LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVL 341
           L    QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L
Sbjct: 242 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 301

Query: 342 ARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------V 395
           + YNIQK STLH+VL     +          +I+L +  S+  E  K K Q         
Sbjct: 302 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 361

Query: 396 KELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           + L+     L+D RTL+DY +     + LV 
Sbjct: 362 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 392



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/163 (34%), Positives = 86/163 (52%), Gaps = 6/163 (3%)

Query: 270 SYGIKNNYVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
            +G   +Y+   + +  QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++
Sbjct: 2   GFGSNFSYLQRSIITNMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 61

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 62  FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 121

Query: 390 KFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 122 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 164


>gi|297808451|ref|XP_002872109.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297317946|gb|EFH48368.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 383

 Score =  244 bits (623), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 151/363 (41%), Positives = 212/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 16  LEVESSDTIDNVKAKIQDKEGIPLDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 75

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 76  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 133

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 134 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 193

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 194 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 253

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 254 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 313

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 314 TGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 373

Query: 354 MVL 356
           +VL
Sbjct: 374 LVL 376



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 2   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPLDQQRLIFAGKQL-EDGRTLAD 59

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 60  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 119

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 120 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 179

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 180 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 239

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 240 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 299

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 300 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLEDGR 359

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 360 TLADYNIQKESTLHLVL 376



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/300 (35%), Positives = 159/300 (53%), Gaps = 12/300 (4%)

Query: 139 ILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFY 198
           ++ IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y
Sbjct: 1   MMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPLDQQRLIFAGKQLEDGRTLADY 60

Query: 199 DMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDL 255
           +++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L
Sbjct: 61  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 120

Query: 256 FYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVK 312
            +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK
Sbjct: 121 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 180

Query: 313 VKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDP 372
            K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          
Sbjct: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 240

Query: 373 SISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           +I+L +  S+  +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 241 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 300


>gi|342298464|emb|CBY46746.1| polyubiquitin 10 protein [Lepidium campestre]
          Length = 381

 Score =  244 bits (623), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 150/363 (41%), Positives = 212/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ + N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTVDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 141/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     TV N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTVDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|302789426|ref|XP_002976481.1| hypothetical protein SELMODRAFT_271198 [Selaginella moellendorffii]
 gi|302803592|ref|XP_002983549.1| hypothetical protein SELMODRAFT_228943 [Selaginella moellendorffii]
 gi|300148792|gb|EFJ15450.1| hypothetical protein SELMODRAFT_228943 [Selaginella moellendorffii]
 gi|300155519|gb|EFJ22150.1| hypothetical protein SELMODRAFT_271198 [Selaginella moellendorffii]
          Length = 381

 Score =  244 bits (623), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 150/363 (41%), Positives = 212/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  207 bits (528), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 138/377 (36%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L E+  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EEGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|118370598|ref|XP_001018500.1| Ubiquitin family protein [Tetrahymena thermophila]
 gi|89300267|gb|EAR98255.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
          Length = 547

 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 157/434 (36%), Positives = 241/434 (55%), Gaps = 15/434 (3%)

Query: 6   SEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKL 64
           S+ I+N+KA I  KEGI  D   L FAG +L+ GR L DY I+  STLH + +    M++
Sbjct: 96  SDTIENIKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLQDYNIQKESTLHLVLRLRGGMQI 155

Query: 65  FVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNI 124
           FVK  T +T T+ +  P+ TV+N+K  IQ KEGI  DQ  L++ GK L +D  T+   NI
Sbjct: 156 FVKTLTGKTVTL-DLEPFDTVENVKAKIQDKEGIPPDQQRLIFAGKQL-DDGRTVQDYNI 213

Query: 125 KSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIY 184
           + ES +HLV   +  + IFVK  TG+ V L+ + S  I ++KA +    G+      +I+
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTVTLDFEASDTIENIKAKIQDKEGIPPDQQRLIF 273

Query: 185 EGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEI 241
            GK+L+DS+TL+ Y+++ E  L +       +QIFV+T   + V L+ E    + ++K  
Sbjct: 274 AGKQLDDSRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTVTLDFEASDTIENIKAK 333

Query: 242 VANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTI 298
           + +   +    Q L +AG +L+  +T+  Y I+    L +   L    QIFVKT  GKT+
Sbjct: 334 IQDKEGIPPDQQRLIFAGKQLDDGRTVQDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTV 393

Query: 299 TLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAP 358
           TLD++P +TV++VK K+ DK   P   Q ++FAGK+L ++  ++ YNIQK STLH+VL  
Sbjct: 394 TLDLEPCDTVENVKAKIQDKEGIPPDQQRLIFAGKQLDDSRTISDYNIQKESTLHLVLRL 453

Query: 359 SSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLA 412
              +          +I+L +  S+  E  K K Q         + L+     L+D RTL+
Sbjct: 454 RGGLQIFVKTLTGKTITLDLEASDTIENVKSKIQDKEGIPPDQQRLIFSGKCLEDFRTLS 513

Query: 413 DYGMDLSEKVVLVF 426
           DY +     + LV 
Sbjct: 514 DYNIQKESTLHLVL 527



 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 146/434 (33%), Positives = 231/434 (53%), Gaps = 15/434 (3%)

Query: 6   SEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKL 64
           S+ I+++KA I  KEGI  D   L FAG +L+  R L DY I+  STLH + +    M++
Sbjct: 20  SDTIEDVKAKIQDKEGIPPDQQRLIFAGKQLDDSRTLSDYNIQKESTLHLVLRLRGGMQI 79

Query: 65  FVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNI 124
           FVK  T +T T ++     T++NIK  IQ KEGI  DQ  L++ GK L +D  T+   NI
Sbjct: 80  FVKTLTGKTVT-LDFEASDTIENIKAKIQDKEGIPPDQQRLIFAGKQL-DDGRTLQDYNI 137

Query: 125 KSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIY 184
           + ES +HLV   +  + IFVK  TG+ V L+++    + +VKA +    G+      +I+
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTVTLDLEPFDTVENVKAKIQDKEGIPPDQQRLIF 197

Query: 185 EGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEI 241
            GK+L+D +T+  Y+++ E  L +       +QIFV+T   + V L+ E    + ++K  
Sbjct: 198 AGKQLDDGRTVQDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTVTLDFEASDTIENIKAK 257

Query: 242 VANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTI 298
           + +   +    Q L +AG +L+  +TL+ Y I+    L +   L    QIFVKT  GKT+
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLDDSRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTV 317

Query: 299 TLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAP 358
           TLD +  +T++++K K+ DK   P   Q ++FAGK+L +   +  YNIQK STLH+VL  
Sbjct: 318 TLDFEASDTIENIKAKIQDKEGIPPDQQRLIFAGKQLDDGRTVQDYNIQKESTLHLVLRL 377

Query: 359 SSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLA 412
              +          +++L +   +  E  K K Q         + L+     L D RT++
Sbjct: 378 RGGMQIFVKTLTGKTVTLDLEPCDTVENVKAKIQDKEGIPPDQQRLIFAGKQLDDSRTIS 437

Query: 413 DYGMDLSEKVVLVF 426
           DY +     + LV 
Sbjct: 438 DYNIQKESTLHLVL 451



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 125/377 (33%), Positives = 201/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +     T++++K  IQ KEGI  DQ  L++ GK L +D+ T++ 
Sbjct: 1   MQIFVKTLTGKTITL-DFEVSDTIEDVKAKIQDKEGIPPDQQRLIFAGKQL-DDSRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ V L+ + S  I ++KA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTVTLDFEASDTIENIKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+L+D +TL  Y+++ E  L +       +QIFV+T   + V L++E    V +V
Sbjct: 119 LIFAGKQLDDGRTLQDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTVTLDLEPFDTVENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +L+  +T+  Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLDDGRTVQDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KT+TLD +  +T++++K K+ DK   P   Q ++FAGK+L ++  L+ YNIQK STLH+V
Sbjct: 239 KTVTLDFEASDTIENIKAKIQDKEGIPPDQQRLIFAGKQLDDSRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +++L    S+  E  K K Q         + L+     L D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTVTLDFEASDTIENIKAKIQDKEGIPPDQQRLIFAGKQLDDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           T+ DY +     + LV 
Sbjct: 359 TVQDYNIQKESTLHLVL 375


>gi|449479809|ref|XP_004177054.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-C-like [Taeniopygia
           guttata]
          Length = 534

 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 161/440 (36%), Positives = 240/440 (54%), Gaps = 16/440 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +    +     TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGCXVLPLCMTGKTITLEVELSDTIENVKAKIQDKEGIPPDS 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLE----MFPSSIQIFVRTPIEEIVRLEVEVLIVV 235
             +I+ GK+LED +T + Y+++   + E    +     QIFV+T   + + LEVE    +
Sbjct: 269 RXLIFAGKQLEDGRTFSDYNIQKVAVAETSVCLSGQQWQIFVKTLTGKTITLEVEPSDTI 328

Query: 236 RDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKT 292
            +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT
Sbjct: 329 ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKT 388

Query: 293 WGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTL 352
             GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STL
Sbjct: 389 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 448

Query: 353 HMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQ 406
           H+VL     +          +I+L +  S+  E  K K Q         + L+     L+
Sbjct: 449 HLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 508

Query: 407 DDRTLADYGMDLSEKVVLVF 426
           D RTL+DY +     + LV 
Sbjct: 509 DGRTLSDYNIQKESTLHLVL 528



 Score =  242 bits (618), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 159/440 (36%), Positives = 242/440 (55%), Gaps = 16/440 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +         +       + + LEVE+   + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGCXVLPLCMTGKTITLEVELSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLD----VLPSPFQIFVKT 292
           +VK  + +   +   ++ L +AG +LE  +T + Y I+   V +    +    +QIFVKT
Sbjct: 253 NVKAKIQDKEGIPPDSRXLIFAGKQLEDGRTFSDYNIQKVAVAETSVCLSGQQWQIFVKT 312

Query: 293 WGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTL 352
             GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STL
Sbjct: 313 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 372

Query: 353 HMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQ 406
           H+VL     +          +I+L +  S+  E  K K Q         + L+     L+
Sbjct: 373 HLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 432

Query: 407 DDRTLADYGMDLSEKVVLVF 426
           D RTL+DY +     + LV 
Sbjct: 433 DGRTLSDYNIQKESTLHLVL 452



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/289 (36%), Positives = 159/289 (55%), Gaps = 12/289 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL        LPL     +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGCXVLPLCMTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGM 416
           I+L + +S+  E  K K Q         + L+     L+D RT +DY +
Sbjct: 241 ITLEVELSDTIENVKAKIQDKEGIPPDSRXLIFAGKQLEDGRTFSDYNI 289


>gi|168050741|ref|XP_001777816.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162670792|gb|EDQ57354.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 381

 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 150/363 (41%), Positives = 211/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  211 bits (537), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|61223100|gb|AAX40652.1| polyubiquitin [Oryza sativa Japonica Group]
          Length = 381

 Score =  243 bits (620), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 151/363 (41%), Positives = 212/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEFSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLVFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 141/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVEFSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q +VFAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLVFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|302822499|ref|XP_002992907.1| hypothetical protein SELMODRAFT_162680 [Selaginella moellendorffii]
 gi|302825882|ref|XP_002994512.1| hypothetical protein SELMODRAFT_163447 [Selaginella moellendorffii]
 gi|300137503|gb|EFJ04420.1| hypothetical protein SELMODRAFT_163447 [Selaginella moellendorffii]
 gi|300139252|gb|EFJ05996.1| hypothetical protein SELMODRAFT_162680 [Selaginella moellendorffii]
          Length = 382

 Score =  243 bits (620), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 150/363 (41%), Positives = 211/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  211 bits (536), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|219118861|ref|XP_002180197.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|219118863|ref|XP_002180198.1| ubiquitin extension protein 4 [Phaeodactylum tricornutum CCAP
           1055/1]
 gi|217408454|gb|EEC48388.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217408455|gb|EEC48389.1| ubiquitin extension protein 4 [Phaeodactylum tricornutum CCAP
           1055/1]
          Length = 381

 Score =  243 bits (620), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 147/363 (40%), Positives = 213/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ +  P  T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-DVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VK  +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITLDV+P +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  211 bits (536), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 136/377 (36%), Positives = 206/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +  P  T+ N+KT IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-DVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITLDV+P +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|302596001|sp|Q58G87.2|UBQ3_ORYSJ RecName: Full=Polyubiquitin 3; Contains: RecName:
           Full=Ubiquitin-related; Contains: RecName:
           Full=Ubiquitin; Flags: Precursor
 gi|39546234|emb|CAE04243.3| OSJNBa0089N06.4 [Oryza sativa Japonica Group]
 gi|125591721|gb|EAZ32071.1| hypothetical protein OsJ_16259 [Oryza sativa Japonica Group]
          Length = 381

 Score =  243 bits (620), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 151/363 (41%), Positives = 212/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEFSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVEFSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|375298514|dbj|BAL61084.1| polyubiqutin [Dianthus caryophyllus]
 gi|375298516|dbj|BAL61085.1| polyubiquitin [Dianthus caryophyllus]
 gi|375298518|dbj|BAL61086.1| polyubiquitin [Dianthus caryophyllus]
          Length = 381

 Score =  243 bits (620), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 150/363 (41%), Positives = 211/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  211 bits (537), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|302595967|sp|P0CG82.1|UBIQP_TETPY RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|578547|emb|CAA43387.1| ubiquitin [Tetrahymena pyriformis]
          Length = 381

 Score =  243 bits (620), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 149/364 (40%), Positives = 217/364 (59%), Gaps = 11/364 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
             M++FVK  T +T T+ VEA    T++N+K  IQ KEGI  DQ  L++ GK L ED  T
Sbjct: 75  GGMQIFVKTLTGKTITLDVEA--SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 131

Query: 119 MTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAA 178
           ++  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+   
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPD 191

Query: 179 DHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVV 235
              +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    +
Sbjct: 192 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTI 251

Query: 236 RDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKT 292
            +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT
Sbjct: 252 ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKT 311

Query: 293 WGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTL 352
             GKTITLDV+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STL
Sbjct: 312 LTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 371

Query: 353 HMVL 356
           H+VL
Sbjct: 372 HLVL 375



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 138/378 (36%), Positives = 208/378 (55%), Gaps = 16/378 (4%)

Query: 62  MKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMT 120
           M++FVK  T +T T+ VEA    T++N+K  IQ KEGI  DQ  L++ GK L ED  T++
Sbjct: 1   MQIFVKTLTGKTITLDVEA--SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLS 57

Query: 121 SMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADH 180
             NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+     
Sbjct: 58  DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQ 117

Query: 181 IMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRD 237
            +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + +
Sbjct: 118 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIEN 177

Query: 238 VKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWG 294
           VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  
Sbjct: 178 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLT 237

Query: 295 GKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHM 354
           GKTITLDV+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+
Sbjct: 238 GKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297

Query: 355 VLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDD 408
           VL     +          +I+L +  S+  E  K K Q         + L+     L+D 
Sbjct: 298 VLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 357

Query: 409 RTLADYGMDLSEKVVLVF 426
           RTL+DY +     + LV 
Sbjct: 358 RTLSDYNIQKESTLHLVL 375


>gi|118358270|ref|XP_001012381.1| Ubiquitin family protein [Tetrahymena thermophila]
 gi|118364888|ref|XP_001015665.1| Ubiquitin family protein [Tetrahymena thermophila]
 gi|1778712|gb|AAC47430.1| polyubiquitin [Tetrahymena thermophila]
 gi|89294148|gb|EAR92136.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
 gi|89297432|gb|EAR95420.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
          Length = 381

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 149/364 (40%), Positives = 217/364 (59%), Gaps = 11/364 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
             M++FVK  T +T T+ VEA    T++N+K  IQ KEGI  DQ  L++ GK L ED  T
Sbjct: 75  GGMQIFVKTLTGKTITLDVEA--SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 131

Query: 119 MTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAA 178
           ++  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+   
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPD 191

Query: 179 DHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVV 235
              +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    +
Sbjct: 192 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTI 251

Query: 236 RDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKT 292
            +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT
Sbjct: 252 ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKT 311

Query: 293 WGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTL 352
             GKTITLDV+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STL
Sbjct: 312 LTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 371

Query: 353 HMVL 356
           H+VL
Sbjct: 372 HLVL 375



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 138/378 (36%), Positives = 208/378 (55%), Gaps = 16/378 (4%)

Query: 62  MKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMT 120
           M++FVK  T +T T+ VEA    T++N+K  IQ KEGI  DQ  L++ GK L ED  T++
Sbjct: 1   MQIFVKTLTGKTITLDVEA--SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLS 57

Query: 121 SMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADH 180
             NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+     
Sbjct: 58  DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQ 117

Query: 181 IMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRD 237
            +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + +
Sbjct: 118 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIEN 177

Query: 238 VKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWG 294
           VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  
Sbjct: 178 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLT 237

Query: 295 GKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHM 354
           GKTITLDV+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+
Sbjct: 238 GKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297

Query: 355 VLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDD 408
           VL     +          +I+L +  S+  E  K K Q         + L+     L+D 
Sbjct: 298 VLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 357

Query: 409 RTLADYGMDLSEKVVLVF 426
           RTL+DY +     + LV 
Sbjct: 358 RTLSDYNIQKESTLHLVL 375


>gi|192910770|gb|ACF06493.1| UBQ4 [Elaeis guineensis]
          Length = 384

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 151/363 (41%), Positives = 211/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV      + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLMGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLMGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|33323472|gb|AAQ07453.1| ubiquitin [Musa acuminata AAA Group]
          Length = 381

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 150/363 (41%), Positives = 212/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + L+VE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLKVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 202/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLKVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|115460714|ref|NP_001053957.1| Os04g0628100 [Oryza sativa Japonica Group]
 gi|113565528|dbj|BAF15871.1| Os04g0628100 [Oryza sativa Japonica Group]
          Length = 392

 Score =  242 bits (618), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 151/363 (41%), Positives = 212/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 26  LEVEFSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 85

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 86  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 143

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 144 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 203

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 204 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 263

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 264 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 323

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 324 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 383

Query: 354 MVL 356
           +VL
Sbjct: 384 LVL 386



 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 141/380 (37%), Positives = 205/380 (53%), Gaps = 14/380 (3%)

Query: 59  LSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
           L +M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T
Sbjct: 9   LFQMQIFVKTLTGKTITL-EVEFSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 66

Query: 119 MTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAA 178
           +   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+   
Sbjct: 67  LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD 126

Query: 179 DHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVV 235
              +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    +
Sbjct: 127 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 186

Query: 236 RDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKT 292
            +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT
Sbjct: 187 DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKT 246

Query: 293 WGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTL 352
             GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STL
Sbjct: 247 LTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 306

Query: 353 HMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQ 406
           H+VL     +          +I+L +  S+  +  K K Q         + L+     L+
Sbjct: 307 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 366

Query: 407 DDRTLADYGMDLSEKVVLVF 426
           D RTLADY +     + LV 
Sbjct: 367 DGRTLADYNIQKESTLHLVL 386



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/232 (35%), Positives = 119/232 (51%), Gaps = 14/232 (6%)

Query: 204 CLLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLE 263
           CL +M     QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE
Sbjct: 8   CLFQM-----QIFVKTLTGKTITLEVEFSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 62

Query: 264 ACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQ 320
             +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK  
Sbjct: 63  DGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEG 122

Query: 321 TPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISI 380
            P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  
Sbjct: 123 IPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVES 182

Query: 381 SEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           S+  +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 183 SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 234


>gi|1800281|gb|AAB68045.1| polyubiquitin [Fragaria x ananassa]
          Length = 381

 Score =  242 bits (618), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 150/363 (41%), Positives = 211/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  I  KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIXDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  211 bits (536), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIXDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|193627304|ref|XP_001947010.1| PREDICTED: polyubiquitin-G-like [Acyrthosiphon pisum]
          Length = 381

 Score =  242 bits (618), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 146/363 (40%), Positives = 217/363 (59%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     +++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S +I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +++++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  207 bits (528), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 135/377 (35%), Positives = 207/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     +++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S +I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +++++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|92790146|emb|CAI83742.1| Polyubiquitin 2 [Dasytricha ruminantium]
          Length = 354

 Score =  242 bits (618), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 146/350 (41%), Positives = 207/350 (59%), Gaps = 9/350 (2%)

Query: 14  AMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQ 72
           A I  KEGI  D   L FAG +LE  R L DY I+  STLH + +    M++FVK  T +
Sbjct: 1   AKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 60

Query: 73  TATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHL 132
           T T+ +  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HL
Sbjct: 61  TITL-DVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNIQKESTLHL 118

Query: 133 VFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDS 192
           V   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+      +I+ GK+LED+
Sbjct: 119 VLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDN 178

Query: 193 KTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLS 249
           +TLA Y+++ E  L +       +QIFV+T   + + L+VE    + +VK  + +   + 
Sbjct: 179 RTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIP 238

Query: 250 LGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYN 306
              Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITLDV+P +
Sbjct: 239 PDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSD 298

Query: 307 TVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           T+++VK K+ DK   P   Q ++FAGK+L +N  LA YNIQK STLH+VL
Sbjct: 299 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVL 348



 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 131/347 (37%), Positives = 191/347 (55%), Gaps = 13/347 (3%)

Query: 92  IQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEI 151
           IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +  + IFVK  TG+ 
Sbjct: 3   IQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 61

Query: 152 VNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM--- 208
           + L+V+ S  I +VKA +    G+      +I+ GK+LED++TLA Y+++ E  L +   
Sbjct: 62  ITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 121

Query: 209 FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTL 268
               +QIFV+T   + + L+VE    + +VK  + +   +    Q L +AG +LE  +TL
Sbjct: 122 LRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTL 181

Query: 269 ASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHL 325
           A Y I+    L +   L    QIFVKT  GKTITLDV+P +T+++VK K+ DK   P   
Sbjct: 182 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQ 241

Query: 326 QSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKE 385
           Q ++FAGK+L +N  LA YNIQK STLH+VL     +          +I+L +  S+  E
Sbjct: 242 QRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIE 301

Query: 386 MAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
             K K Q         + L+     L+D+RTLADY +     + LV 
Sbjct: 302 NVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVL 348



 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 108/283 (38%), Positives = 162/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I+N+KA I  KEGI  D   L FAG +LE  R L DY I+  STLH + +  
Sbjct: 64  LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLR 123

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T ++  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 124 GGMQIFVKTLTGKTIT-LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTL 181

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+    
Sbjct: 182 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQ 241

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED++TLA Y+++ E  L +       +QIFV+T   + + L+VE    + 
Sbjct: 242 QRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIE 301

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 302 NVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTL 344


>gi|2760349|gb|AAB95252.1| ubiquitin [Arabidopsis thaliana]
          Length = 380

 Score =  242 bits (618), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 150/363 (41%), Positives = 212/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQWLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA Y+IQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYDIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  211 bits (536), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 138/365 (37%), Positives = 199/365 (54%), Gaps = 14/365 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQW 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADY 414
           TLADY
Sbjct: 359 TLADY 363



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 107/299 (35%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQWLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299


>gi|330790588|ref|XP_003283378.1| ubiquitin [Dictyostelium purpureum]
 gi|325086643|gb|EGC40029.1| ubiquitin [Dictyostelium purpureum]
 gi|328867190|gb|EGG15573.1| ubiquitin [Dictyostelium fasciculatum]
          Length = 381

 Score =  242 bits (617), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 147/363 (40%), Positives = 215/363 (59%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  211 bits (536), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 137/377 (36%), Positives = 206/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+KT IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|170097832|ref|XP_001880135.1| ubiquitin [Laccaria bicolor S238N-H82]
 gi|395056|emb|CAA80851.1| ubiquitin [Phanerochaete chrysosporium]
 gi|164644573|gb|EDR08822.1| ubiquitin [Laccaria bicolor S238N-H82]
 gi|389741436|gb|EIM82624.1| ubiquitin [Stereum hirsutum FP-91666 SS1]
          Length = 381

 Score =  241 bits (616), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 148/363 (40%), Positives = 213/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 136/377 (36%), Positives = 204/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|336385317|gb|EGO26464.1| hypothetical protein SERLADRAFT_368035 [Serpula lacrymans var.
           lacrymans S7.9]
 gi|392571572|gb|EIW64744.1| ubiquitin [Trametes versicolor FP-101664 SS1]
 gi|395334250|gb|EJF66626.1| ubiquitin [Dichomitus squalens LYAD-421 SS1]
 gi|403414247|emb|CCM00947.1| predicted protein [Fibroporia radiculosa]
          Length = 381

 Score =  241 bits (616), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 148/363 (40%), Positives = 213/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 136/377 (36%), Positives = 204/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|402220063|gb|EJU00136.1| ubiquitin [Dacryopinax sp. DJM-731 SS1]
          Length = 381

 Score =  241 bits (615), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 148/363 (40%), Positives = 213/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 136/377 (36%), Positives = 204/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|405123351|gb|AFR98116.1| polyubiquitin [Cryptococcus neoformans var. grubii H99]
          Length = 381

 Score =  241 bits (615), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 148/363 (40%), Positives = 213/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 136/377 (36%), Positives = 204/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|298710587|emb|CBJ32017.1| similar to ubiquitin [Ectocarpus siliculosus]
          Length = 609

 Score =  241 bits (615), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 158/427 (37%), Positives = 232/427 (54%), Gaps = 15/427 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I  +K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ +  P  T+  +K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-DVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I  VK  +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
            VK+ + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 GVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITLDV+P +T+  VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADY 414
            RTL+DY
Sbjct: 433 GRTLSDY 439



 Score =  241 bits (615), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 158/427 (37%), Positives = 232/427 (54%), Gaps = 15/427 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I  +K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ +  P  T+  +K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-DVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I  VK  +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTID 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
            VK+ + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 GVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITLDV+P +T+  VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADY 414
            RTL+DY
Sbjct: 509 GRTLSDY 515



 Score =  241 bits (615), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 158/427 (37%), Positives = 232/427 (54%), Gaps = 15/427 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I  +K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ +  P  T+  +K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-DVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I  VK  +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTID 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
            VK+ + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 GVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITLDV+P +T+  VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADY 414
            RTL+DY
Sbjct: 585 GRTLSDY 591



 Score =  234 bits (596), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 144/363 (39%), Positives = 208/363 (57%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I  +K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ +  P  T+  +K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-DVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I  VK  +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTID 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
            VK+ + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 GVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITLDV+P +T+  VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVL 356
           +VL
Sbjct: 601 LVL 603



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/365 (36%), Positives = 198/365 (54%), Gaps = 14/365 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +  P  T+  +K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-DVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I  VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    +  V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K+ + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITLDV+P +T+  VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADY 414
           TL+DY
Sbjct: 359 TLSDY 363


>gi|145530714|ref|XP_001451129.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124418773|emb|CAK83732.1| unnamed protein product [Paramecium tetraurelia]
          Length = 624

 Score =  241 bits (615), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 161/439 (36%), Positives = 237/439 (53%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I  +KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 182 LDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 241

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ +  P  T+  +K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 242 GGMQIFVKTLTGKTITL-DVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 299

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I  VKA +    G+    
Sbjct: 300 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQ 359

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + 
Sbjct: 360 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTID 419

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
            VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVK+ 
Sbjct: 420 AVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKSL 479

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITLDV+P +T+  VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 480 TGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 539

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 540 LVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLED 599

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 600 GRTLSDYNIQKESTLHLVL 618



 Score =  204 bits (519), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 153/442 (34%), Positives = 227/442 (51%), Gaps = 26/442 (5%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGRLVDYGIRNNSTLHFL---HQ 57
           + V+ S+ I  +KA I  KEGI  D   L F        R V    +N   L  L   H 
Sbjct: 111 LDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFC-------RKVIRRWKNTFRLQHLKGIHS 163

Query: 58  NLS-EMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDT 116
            LS E++ +  + T +T T+ +  P  T+  +K  IQ KEGI  DQ  L++ GK L ED 
Sbjct: 164 PLSFEIERWNTL-TGKTITL-DVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQL-EDG 220

Query: 117 ATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVS 176
            T++  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I  VKA +    G+ 
Sbjct: 221 RTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIP 280

Query: 177 AADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLI 233
                +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE   
Sbjct: 281 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSD 340

Query: 234 VVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFV 290
            +  VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFV
Sbjct: 341 TIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 400

Query: 291 KTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHS 350
           KT  GKTITLDV+P +T+  VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK S
Sbjct: 401 KTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 460

Query: 351 TLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVA 404
           TLH+VL     +          +I+L +  S+  +  K K Q         + L+     
Sbjct: 461 TLHLVLRLRGGMQIFVKSLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQ 520

Query: 405 LQDDRTLADYGMDLSEKVVLVF 426
           L+D RTL+DY +     + LV 
Sbjct: 521 LEDGRTLSDYNIQKESTLHLVL 542



 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 146/439 (33%), Positives = 222/439 (50%), Gaps = 25/439 (5%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I  +KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 40  LDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR-- 97

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             +K +  + T +T T+ +  P  T+  +K  IQ KEGI  DQ  L++  K+++    T 
Sbjct: 98  --LKRWNTL-TGKTITL-DVEPSDTIDAVKAKIQDKEGIPPDQQRLIFCRKVIRRWKNTF 153

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              ++K       +  P           TG+ + L+V+ S  I  VKA +    G+    
Sbjct: 154 RLQHLKG------IHSPLSFEIERWNTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQ 207

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + 
Sbjct: 208 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTID 267

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
            VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 268 AVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 327

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITLDV+P +T+  VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 328 TGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 387

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 388 LVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLED 447

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 448 GRTLSDYNIQKESTLHLVL 466



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 125/376 (33%), Positives = 186/376 (49%), Gaps = 22/376 (5%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +  P  T+  +K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 26  MQIFVKTLTGKTITL-DVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 83

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   K   ++     TG+ + L+V+ S  I  VKA +    G+      
Sbjct: 84  YNIQKESTLHLVLRLKRWNTL-----TGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQR 138

Query: 182 MIYEGKKLEDSK-TLAFYDMKDECLLEMFPSSIQI-FVRTPIEEIVRLEVEVLIVVRDVK 239
           +I+  K +   K T     +K        P S +I    T   + + L+VE    +  VK
Sbjct: 139 LIFCRKVIRRWKNTFRLQHLKGI----HSPLSFEIERWNTLTGKTITLDVEPSDTIDAVK 194

Query: 240 EIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGK 296
             + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GK
Sbjct: 195 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 254

Query: 297 TITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           TITLDV+P +T+  VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 255 TITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 314

Query: 357 APSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRT 410
                +          +I+L +  S+  +  K K Q         + L+     L+D RT
Sbjct: 315 RLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 374

Query: 411 LADYGMDLSEKVVLVF 426
           L+DY +     + LV 
Sbjct: 375 LSDYNIQKESTLHLVL 390


>gi|3789942|gb|AAC67552.1| polyubiquitin [Saccharum hybrid cultivar H32-8560]
          Length = 381

 Score =  241 bits (614), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 149/363 (41%), Positives = 210/363 (57%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ   ++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRXIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLAXYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q   +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRXIFAGKQLEDGRTLAXYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 201/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
            I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 XIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAXYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q  +FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRXIFAGKQLEDGRTLAXYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|156101796|ref|XP_001616591.1| polyubiquitin 5 [Plasmodium vivax Sal-1]
 gi|148805465|gb|EDL46864.1| polyubiquitin 5, putative [Plasmodium vivax]
          Length = 381

 Score =  241 bits (614), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 145/363 (39%), Positives = 215/363 (59%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I+N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ +     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-DVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITLDV+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 135/377 (35%), Positives = 207/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +     T++N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-DVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITLDV+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|353231251|emb|CCD77669.1| putative ubiquitin (ribosomal protein L40) [Schistosoma mansoni]
          Length = 379

 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 148/363 (40%), Positives = 216/363 (59%), Gaps = 11/363 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI++E I+  V      + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQTELIV--VHENTRRMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 190

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 191 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 250

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 251 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 310

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 311 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 370

Query: 354 MVL 356
           +VL
Sbjct: 371 LVL 373



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 138/375 (36%), Positives = 208/375 (55%), Gaps = 12/375 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLL-EMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKE 240
           +I+ GK+LED +TL+ Y+++ E ++       +QIFV+T   + + LEVE    + +VK 
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQTELIVVHENTRRMQIFVKTLTGKTITLEVEPSDTIENVKA 178

Query: 241 IVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKT 297
            + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKT
Sbjct: 179 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 238

Query: 298 ITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLA 357
           ITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL 
Sbjct: 239 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 298

Query: 358 PSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTL 411
               +          +I+L +  S+  E  K K Q         + L+     L+D RTL
Sbjct: 299 LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 358

Query: 412 ADYGMDLSEKVVLVF 426
           +DY +     + LV 
Sbjct: 359 SDYNIQKESTLHLVL 373


>gi|290750644|gb|ADD52202.1| ubiquitin [Catharanthus roseus]
 gi|341869050|gb|AEK98798.1| ubiquitin [Carthamus tinctorius]
          Length = 381

 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 149/363 (41%), Positives = 209/363 (57%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA    KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKTQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T  N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADCNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++ AGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLILAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 137/377 (36%), Positives = 201/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K   Q KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKTQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S    +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTTDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA  +++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADCNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L++    L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLILAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|321263887|ref|XP_003196661.1| ATP-dependent protein binding protein [Cryptococcus gattii WM276]
 gi|317463138|gb|ADV24874.1| ATP-dependent protein binding protein, putative [Cryptococcus
           gattii WM276]
          Length = 381

 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 147/363 (40%), Positives = 213/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  207 bits (527), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 136/377 (36%), Positives = 205/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|576773|gb|AAA82978.1| polyubiquitin [Cryptococcus neoformans var. grubii]
          Length = 381

 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 147/363 (40%), Positives = 213/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+L+D +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLDDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 135/377 (35%), Positives = 204/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +L+  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLDDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|403366242|gb|EJY82919.1| Ubiquitin [Oxytricha trifallax]
          Length = 379

 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 146/363 (40%), Positives = 215/363 (59%), Gaps = 10/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ +  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-DVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVLPSP---FQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y  +  Y     P     + IFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYTSRKIYS-SFGPQTQRWYAIFVKTL 311

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITLDV+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 312 TGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 371

Query: 354 MVL 356
           +VL
Sbjct: 372 LVL 374



 Score =  194 bits (493), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 131/381 (34%), Positives = 206/381 (54%), Gaps = 23/381 (6%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-DVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITLDV+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ Y  +K   ++  
Sbjct: 239 KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYTSRK---IYSS 295

Query: 356 LAPSSRIIELPLIFI----DPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVAL 405
             P ++      IF+      +I+L +  S+  E  K K Q         + L+     L
Sbjct: 296 FGPQTQ--RWYAIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 353

Query: 406 QDDRTLADYGMDLSEKVVLVF 426
           +D RTL+DY +     + LV 
Sbjct: 354 EDGRTLSDYNIQKESTLHLVL 374


>gi|344243115|gb|EGV99218.1| Ubiquitin [Cricetulus griseus]
          Length = 430

 Score =  239 bits (611), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 145/363 (39%), Positives = 213/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED   +
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRPL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+    I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPRDTIENVKAWIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED + L+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRPLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPRDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  + L+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAWIQDKEGIPPDQQRLIFAGKQLEDGRPLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK  + DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPRDTIENVKAWIQDKEGIPPDQQRLIFAGKQLEDGRPLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 133/377 (35%), Positives = 202/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED + L+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRPLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPRDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  + L+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAWIQDKEGIPPDQQRLIFAGKQLEDGRPLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK  + DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPRDTIENVKAWIQDKEGIPPDQQRLIFAGKQLEDGRPLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +   +  E  K   Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPRDTIENVKAWIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
            L+DY +     + LV 
Sbjct: 359 PLSDYNIQKESTLHLVL 375



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/319 (38%), Positives = 183/319 (57%), Gaps = 9/319 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRPLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED   +
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPRDTIENVKAWIQDKEGIPPDQQRLIFAGKQL-EDGRPL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+    I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPRDTIENVKAWIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED + L+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRPLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPRDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  + L+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAWIQDKEGIPPDQQRLIFAGKQLEDGRPLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVK 312
            GKTITL+V+P NT++  K
Sbjct: 389 TGKTITLEVEPSNTIKKSK 407



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 94/244 (38%), Positives = 141/244 (57%), Gaps = 6/244 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+  + I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPRDTIENVKAWIQDKEGIPPDQQRLIFAGKQLEDGRPLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED   +
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPRDTIENVKAWIQDKEGIPPDQQRLIFAGKQL-EDGRPL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+    I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPRDTIENVKAWIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED + L+ Y+++ E  L +       +QIFV+T   + + LEVE    ++
Sbjct: 345 QRLIFAGKQLEDGRPLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSNTIK 404

Query: 237 DVKE 240
             K+
Sbjct: 405 KSKQ 408


>gi|19112201|ref|NP_595409.1| ubiquitin [Schizosaccharomyces pombe 972h-]
 gi|302595955|sp|P0CG72.1|UBI4P_SCHPO RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|3738185|emb|CAA21278.1| ubiquitin [Schizosaccharomyces pombe]
          Length = 382

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 146/363 (40%), Positives = 214/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 135/377 (35%), Positives = 205/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|50307963|ref|XP_453980.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|302595952|sp|P0CG75.1|UBI4P_KLULA RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|5531273|emb|CAB50898.1| polyubiquitin [Kluyveromyces lactis]
 gi|49643115|emb|CAG99067.1| KLLA0E00749p [Kluyveromyces lactis]
          Length = 381

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 146/363 (40%), Positives = 214/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 135/377 (35%), Positives = 205/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|440638790|gb|ELR08709.1| polyubiquitin [Geomyces destructans 20631-21]
          Length = 381

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 146/363 (40%), Positives = 214/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 135/377 (35%), Positives = 205/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|406606462|emb|CCH42236.1| ubiquitin C [Wickerhamomyces ciferrii]
          Length = 383

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 146/363 (40%), Positives = 214/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 135/377 (35%), Positives = 205/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|366992347|ref|XP_003675939.1| hypothetical protein NCAS_0C05850 [Naumovozyma castellii CBS 4309]
 gi|342301804|emb|CCC69575.1| hypothetical protein NCAS_0C05850 [Naumovozyma castellii CBS 4309]
          Length = 388

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 146/363 (40%), Positives = 214/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 135/377 (35%), Positives = 205/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|45185626|ref|NP_983342.1| ACL062Cp [Ashbya gossypii ATCC 10895]
 gi|44981344|gb|AAS51166.1| ACL062Cp [Ashbya gossypii ATCC 10895]
 gi|374106548|gb|AEY95457.1| FACL062Cp [Ashbya gossypii FDAG1]
          Length = 382

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 146/363 (40%), Positives = 214/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 135/377 (35%), Positives = 205/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|374717833|gb|AEZ66647.1| putative beta-1,6-glucanase [Wickerhamomyces anomalus]
 gi|374717835|gb|AEZ66648.1| putative beta-1,6-glucanase [Wickerhamomyces anomalus]
          Length = 381

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 146/363 (40%), Positives = 214/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 135/377 (35%), Positives = 205/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|124377852|tpd|FAA00316.1| TPA: polyubiquitin [Eremothecium gossypii]
 gi|124377856|tpd|FAA00318.1| TPA: polyubiquitin [Saccharomyces paradoxus NRRL Y-17217]
          Length = 380

 Score =  239 bits (609), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 146/363 (40%), Positives = 214/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 135/377 (35%), Positives = 205/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|6322989|ref|NP_013061.1| ubiquitin [Saccharomyces cerevisiae S288c]
 gi|260940391|ref|XP_002614495.1| ubiquitin [Clavispora lusitaniae ATCC 42720]
 gi|302595956|sp|P0CG63.1|UBI4P_YEAST RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|4734|emb|CAA29198.1| unnamed protein product [Saccharomyces cerevisiae]
 gi|1360231|emb|CAA97489.1| UBI4 [Saccharomyces cerevisiae]
 gi|151941132|gb|EDN59510.1| poly-ubiquitin [Saccharomyces cerevisiae YJM789]
 gi|190406010|gb|EDV09277.1| hypothetical protein SCRG_04952 [Saccharomyces cerevisiae RM11-1a]
 gi|238851681|gb|EEQ41145.1| ubiquitin [Clavispora lusitaniae ATCC 42720]
 gi|259147952|emb|CAY81201.1| Ubi4p [Saccharomyces cerevisiae EC1118]
 gi|285813387|tpg|DAA09283.1| TPA: ubiquitin [Saccharomyces cerevisiae S288c]
 gi|323336529|gb|EGA77795.1| Ubi4p [Saccharomyces cerevisiae Vin13]
 gi|349579690|dbj|GAA24851.1| K7_Ubi4p [Saccharomyces cerevisiae Kyokai no. 7]
          Length = 381

 Score =  239 bits (609), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 146/363 (40%), Positives = 214/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 135/377 (35%), Positives = 205/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|3047318|gb|AAC13691.1| poly-ubiquitin [Magnaporthe grisea]
          Length = 379

 Score =  239 bits (609), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 145/361 (40%), Positives = 214/361 (59%), Gaps = 7/361 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ E+ +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKETTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM-FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
             +I+ GK+LED +TL+ Y+++ E  L +     +QIFV+T   + + LEVE    + +V
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRGGMQIFVKTLTGKTITLEVESSDTIDNV 252

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 253 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 312

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 313 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 372

Query: 356 L 356
           L
Sbjct: 373 L 373



 Score =  207 bits (527), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 136/375 (36%), Positives = 205/375 (54%), Gaps = 12/375 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKETTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLD-VLPSPFQIFVKTWGGKT 297
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L  VL    QIFVKT  GKT
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRGGMQIFVKTLTGKT 238

Query: 298 ITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLA 357
           ITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL 
Sbjct: 239 ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 298

Query: 358 PSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTL 411
               +          +I+L +  S+  +  K K Q         + L+     L+D RTL
Sbjct: 299 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTL 358

Query: 412 ADYGMDLSEKVVLVF 426
           +DY +     + LV 
Sbjct: 359 SDYNIQKESTLHLVL 373


>gi|328353975|emb|CCA40372.1| Ubiquitin cross-reactive protein [Komagataella pastoris CBS 7435]
          Length = 386

 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 146/363 (40%), Positives = 214/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 135/377 (35%), Positives = 205/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|213401917|ref|XP_002171731.1| ubiquitin [Schizosaccharomyces japonicus yFS275]
 gi|211999778|gb|EEB05438.1| ubiquitin [Schizosaccharomyces japonicus yFS275]
          Length = 382

 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 146/363 (40%), Positives = 214/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 135/377 (35%), Positives = 205/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|66812158|ref|XP_640258.1| hypothetical protein DDB_G0282295 [Dictyostelium discoideum AX4]
 gi|302595958|sp|P0CG76.1|UBIQA_DICDI RecName: Full=Polyubiquitin-A; Contains: RecName: Full=Ubiquitin;
           Contains: RecName: Full=Ubiquitin-related 1; Flags:
           Precursor
 gi|167937|gb|AAA33262.1| ubiquitin [Dictyostelium discoideum]
 gi|167951|gb|AAA33269.1| ubiquitin [Dictyostelium discoideum]
 gi|60468260|gb|EAL66269.1| hypothetical protein DDB_G0282295 [Dictyostelium discoideum AX4]
          Length = 381

 Score =  238 bits (606), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 146/363 (40%), Positives = 214/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E      ++N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEGSDNIENVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKTKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  + +++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEGSDNIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 134/377 (35%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E      ++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKTKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  + +++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|66811838|ref|XP_640098.1| hypothetical protein DDB_G0282369 [Dictyostelium discoideum AX4]
 gi|302595961|sp|P0CG79.1|UBIQG_DICDI RecName: Full=Polyubiquitin-G; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|167949|gb|AAA33268.1| ubiquitin [Dictyostelium discoideum]
 gi|60468034|gb|EAL66044.1| hypothetical protein DDB_G0282369 [Dictyostelium discoideum AX4]
          Length = 381

 Score =  238 bits (606), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 146/363 (40%), Positives = 214/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E      ++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  + +++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  204 bits (519), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 135/377 (35%), Positives = 204/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E      ++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  + +++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|281208308|gb|EFA82486.1| ubiquitin [Polysphondylium pallidum PN500]
          Length = 443

 Score =  237 bits (605), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 157/427 (36%), Positives = 231/427 (54%), Gaps = 29/427 (6%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T               +IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT---------------LIQDKEGIPPDQQRLIFAGKQL-EDGRTL 118

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 119 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQ 178

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 179 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIE 238

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 239 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 298

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 299 TGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 358

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 359 LVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLED 418

Query: 408 DRTLADY 414
            RTL+DY
Sbjct: 419 GRTLSDY 425



 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 142/350 (40%), Positives = 205/350 (58%), Gaps = 9/350 (2%)

Query: 14  AMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQ 72
            +I  KEGI  D   L FAG +LE GR L DY I+  STLH + +    M++FVK  T +
Sbjct: 90  TLIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 149

Query: 73  TATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHL 132
           T T+ E     T++N+KT IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +HL
Sbjct: 150 TITL-EVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHL 207

Query: 133 VFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDS 192
           V   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+LED 
Sbjct: 208 VLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDG 267

Query: 193 KTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLS 249
           +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   + 
Sbjct: 268 RTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIP 327

Query: 250 LGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYN 306
              Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +
Sbjct: 328 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSD 387

Query: 307 TVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 388 TIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 437



 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 131/365 (35%), Positives = 197/365 (53%), Gaps = 28/365 (7%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+KT IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + L       I+D +       G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL-------IQDKE-------GIPPDQQR 104

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 105 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENV 164

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 165 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 224

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 225 KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 284

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 285 LRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGR 344

Query: 410 TLADY 414
           TL+DY
Sbjct: 345 TLSDY 349


>gi|413935668|gb|AFW70219.1| polyubiquitin-like protein [Zea mays]
          Length = 502

 Score =  237 bits (605), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 168/484 (34%), Positives = 240/484 (49%), Gaps = 60/484 (12%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV--------------- 281
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +               
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 282 ---------------------------------LPSPFQIFVKTWGGKTITLDVQPYNTV 308
                                            L    QIFVKT  GKTITL+V+  +T+
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 372

Query: 309 QDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLI 368
            +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +      
Sbjct: 373 DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKT 432

Query: 369 FIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKV 422
               +I+L +  S+  +  K K Q         + L+     L+D RTLADY +     +
Sbjct: 433 LTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 492

Query: 423 VLVF 426
            LV 
Sbjct: 493 HLVL 496



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 129/337 (38%), Positives = 187/337 (55%), Gaps = 8/337 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ 392
           L     +          +I+L +  S+  +  K K Q
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 335



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/299 (35%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299


>gi|71008515|ref|XP_758220.1| hypothetical protein UM02073.1 [Ustilago maydis 521]
 gi|46097838|gb|EAK83071.1| hypothetical protein UM02073.1 [Ustilago maydis 521]
          Length = 387

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 148/369 (40%), Positives = 213/369 (57%), Gaps = 15/369 (4%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDEC---------LLEMFPSSIQIFVRTPIEEIVRLEVE 230
             +I+ GK+LED +TL+ Y+++ E          L+      +QIFV+T   + + LEVE
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTHSPCSTLHLVLRLRGGMQIFVKTLTGKTITLEVE 252

Query: 231 VLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQ 287
               + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    Q
Sbjct: 253 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 312

Query: 288 IFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQ 347
           IFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQ
Sbjct: 313 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 372

Query: 348 KHSTLHMVL 356
           K STLH+VL
Sbjct: 373 KESTLHLVL 381



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 135/383 (35%), Positives = 205/383 (53%), Gaps = 20/383 (5%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNN---------YVLDVLPSPFQIF 289
           K  + +   +    Q L +AG +LE  +TL+ Y I+           +++  L    QIF
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTHSPCSTLHLVLRLRGGMQIF 238

Query: 290 VKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKH 349
           VKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK 
Sbjct: 239 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 298

Query: 350 STLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQV 403
           STLH+VL     +          +I+L +  S+  +  K K Q         + L+    
Sbjct: 299 STLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK 358

Query: 404 ALQDDRTLADYGMDLSEKVVLVF 426
            L+D RTL+DY +     + LV 
Sbjct: 359 QLEDGRTLSDYNIQKESTLHLVL 381


>gi|66814762|ref|XP_641560.1| hypothetical protein DDB_G0279721 [Dictyostelium discoideum AX4]
 gi|302595962|sp|P0CG81.1|UBIQH_DICDI RecName: Full=Polyubiquitin-H; Contains: RecName: Full=Ubiquitin;
           Contains: RecName: Full=Ubiquitin-like
 gi|60469646|gb|EAL67635.1| hypothetical protein DDB_G0279721 [Dictyostelium discoideum AX4]
          Length = 381

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 146/363 (40%), Positives = 214/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E      ++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  + +++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVECSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 135/377 (35%), Positives = 204/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E      ++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  + +++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVECSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>gi|102655942|gb|AAY33920.2| polyubiquitin [Euphorbia characias]
          Length = 381

 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 148/363 (40%), Positives = 209/363 (57%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA    KEGI  D   L FAG  LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKFQDKEGIPPDQQRLIFAGKHLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKHL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+L+  +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLDHGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPSQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  207 bits (527), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 138/377 (36%), Positives = 202/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K   Q KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKFQDKEGIPPDQQRLIFAGKHL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKHLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +L+  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLDHGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q       + + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPSQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|302143601|emb|CBI22354.3| unnamed protein product [Vitis vinifera]
          Length = 771

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 172/503 (34%), Positives = 243/503 (48%), Gaps = 79/503 (15%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 56  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 115

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 116 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 173

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 174 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 233

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 234 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 293

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL----------------D 280
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L                D
Sbjct: 294 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGDPMDVKND 353

Query: 281 VLPSP---------------------------------------------------FQIF 289
            LPSP                                                    QIF
Sbjct: 354 FLPSPNLPTSTTINIKYFLSSHHSKRLCGLPEKQSSFLCLFIDHSLFPNRSLFPFKMQIF 413

Query: 290 VKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKH 349
           VKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK 
Sbjct: 414 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 473

Query: 350 STLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQV 403
           STLH+VL     +          +I+L +  S+  +  K K Q         + L+    
Sbjct: 474 STLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK 533

Query: 404 ALQDDRTLADYGMDLSEKVVLVF 426
            L+D RTLADY +     + LV 
Sbjct: 534 QLEDGRTLADYNIQKESTLHLVL 556



 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 143/363 (39%), Positives = 199/363 (54%), Gaps = 33/363 (9%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 424 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 483

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 484 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 541

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 542 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 601

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 602 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 661

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 662 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 721

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+                        Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 722 TGKTITLE------------------------QRLIFAGKQLEDGRTLADYNIQKESTLH 757

Query: 354 MVL 356
           +VL
Sbjct: 758 LVL 760



 Score =  218 bits (554), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 170/502 (33%), Positives = 244/502 (48%), Gaps = 77/502 (15%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 208 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 267

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLL------- 112
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L       
Sbjct: 268 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 326

Query: 113 -----KEDT-------------------------ATMTSMNIK----------------S 126
                KE T                          T T++NIK                 
Sbjct: 327 DYNIQKESTLHLVLRLRGGDPMDVKNDFLPSPNLPTSTTINIKYFLSSHHSKRLCGLPEK 386

Query: 127 ES------IIHLVFCPKEI----LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVS 176
           +S      I H +F  + +    + IFVK  TG+ + LEV+ S  I +VKA +    G+ 
Sbjct: 387 QSSFLCLFIDHSLFPNRSLFPFKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 446

Query: 177 AADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLI 233
                +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE   
Sbjct: 447 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD 506

Query: 234 VVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFV 290
            + +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFV
Sbjct: 507 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFV 566

Query: 291 KTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHS 350
           KT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK S
Sbjct: 567 KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKES 626

Query: 351 TLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVA 404
           TLH+VL     +          +I+L +  S+  +  K K Q         + L+     
Sbjct: 627 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQ 686

Query: 405 LQDDRTLADYGMDLSEKVVLVF 426
           L+D RTLADY +     + LV 
Sbjct: 687 LEDGRTLADYNIQKESTLHLVL 708



 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 135/328 (41%), Positives = 190/328 (57%), Gaps = 9/328 (2%)

Query: 36  LEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQV 94
           LE GR L DY I+  STLH + +    M++FVK  T +T T+ E     T+ N+K  IQ 
Sbjct: 15  LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQD 73

Query: 95  KEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNL 154
           KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +  + IFVK  TG+ + L
Sbjct: 74  KEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL 132

Query: 155 EVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPS 211
           EV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+++ E  L +      
Sbjct: 133 EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 192

Query: 212 SIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASY 271
            +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y
Sbjct: 193 GMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 252

Query: 272 GIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSI 328
            I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q +
Sbjct: 253 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 312

Query: 329 VFAGKRLFENHVLARYNIQKHSTLHMVL 356
           +FAGK+L +   LA YNIQK STLH+VL
Sbjct: 313 IFAGKQLEDGRTLADYNIQKESTLHLVL 340



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 142/384 (36%), Positives = 205/384 (53%), Gaps = 30/384 (7%)

Query: 53  HFLHQNLS----EMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYD 108
           H L  N S    +M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ 
Sbjct: 397 HSLFPNRSLFPFKMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 455

Query: 109 GKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAI 168
           GK L ED  T+   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA 
Sbjct: 456 GKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK 514

Query: 169 VGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIV 225
           +    G+      +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + +
Sbjct: 515 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 574

Query: 226 RLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---L 282
            LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L
Sbjct: 575 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 634

Query: 283 PSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLA 342
               QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA
Sbjct: 635 RGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 694

Query: 343 RYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAAVKELLVDQ 402
            YNIQK STLH+VL    R+     IF+      +I++ +               L+   
Sbjct: 695 DYNIQKESTLHLVL----RLRGGMQIFVKTLTGKTITLEQ--------------RLIFAG 736

Query: 403 VALQDDRTLADYGMDLSEKVVLVF 426
             L+D RTLADY +     + LV 
Sbjct: 737 KQLEDGRTLADYNIQKESTLHLVL 760



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/325 (36%), Positives = 172/325 (52%), Gaps = 12/325 (3%)

Query: 114 EDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVV 173
           ED  T+   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    
Sbjct: 16  EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 75

Query: 174 GVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVE 230
           G+      +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE
Sbjct: 76  GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 135

Query: 231 VLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQ 287
               + +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    Q
Sbjct: 136 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQ 195

Query: 288 IFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQ 347
           IFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQ
Sbjct: 196 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 255

Query: 348 KHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVD 401
           K STLH+VL     +          +I+L +  S+  +  K K Q         + L+  
Sbjct: 256 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 315

Query: 402 QVALQDDRTLADYGMDLSEKVVLVF 426
              L+D RTLADY +     + LV 
Sbjct: 316 GKQLEDGRTLADYNIQKESTLHLVL 340



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 89/250 (35%), Positives = 130/250 (52%), Gaps = 12/250 (4%)

Query: 189 LEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANI 245
           LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + + 
Sbjct: 15  LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK 74

Query: 246 IDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDV 302
             +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V
Sbjct: 75  EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 134

Query: 303 QPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRI 362
           +  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +
Sbjct: 135 ESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 194

Query: 363 IELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGM 416
                     +I+L +  S+  +  K K Q         + L+     L+D RTLADY +
Sbjct: 195 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 254

Query: 417 DLSEKVVLVF 426
                + LV 
Sbjct: 255 QKESTLHLVL 264


>gi|167935|gb|AAA33261.1| ubiquitin, partial [Dictyostelium discoideum]
          Length = 381

 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 146/363 (40%), Positives = 213/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E      ++N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEGSDNIENVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKTKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  + +++VK K+ DK   P   Q ++FAGK+L +   L  YNIQK STLH
Sbjct: 313 TGKTITLEVEGSDNIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLFDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  200 bits (509), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 134/377 (35%), Positives = 202/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E      ++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKTKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  + +++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL DY +     + LV 
Sbjct: 359 TLFDYNIQKESTLHLVL 375


>gi|630479|pir||S43306 polyubiquitin 6 - Geodia cydonium
          Length = 448

 Score =  235 bits (600), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 163/428 (38%), Positives = 243/428 (56%), Gaps = 24/428 (5%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ E++ HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKETL-HLVRL-RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 190

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECL-LEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
             +I+ GK+LED +TL+ Y+++ E L L      +QIFV+T   + + LEVE    + +V
Sbjct: 191 QRLIFAGKQLEDGRTLSDYNIQKETLHLVRLRGGMQIFVKTLTGKTITLEVEASDTIENV 250

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNN--YVLDVLPSPFQIFVKTWGGK 296
           K  + +   +    Q L +AG +LE  +TL+ Y I+    +++  L    QIFVKT  GK
Sbjct: 251 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKETLHLVVRLRGGMQIFVKTLTGK 310

Query: 297 TITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           TITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK  TLH+V 
Sbjct: 311 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE-TLHLV- 368

Query: 357 APSSRIIELPLIFI----DPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQ 406
               R+     IF+      +I+L +  S+  E  K K Q         + L+     L+
Sbjct: 369 ----RLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 424

Query: 407 DDRTLADY 414
           D RTL+DY
Sbjct: 425 DGRTLSDY 432



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 144/359 (40%), Positives = 212/359 (59%), Gaps = 11/359 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+   TLH +    
Sbjct: 91  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK-ETLHLVRLR- 148

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 149 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 206

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ E++ HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 207 SDYNIQKETL-HLVRL-RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 264

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECL--LEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRD 237
             +I+ GK+LED +TL+ Y+++ E L  +      +QIFV+T   + + LEVE    + +
Sbjct: 265 QRLIFAGKQLEDGRTLSDYNIQKETLHLVVRLRGGMQIFVKTLTGKTITLEVEASDTIEN 324

Query: 238 VKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYV-LDVLPSPFQIFVKTWGGK 296
           VK  + +   +    Q L +AG +LE  +TL+ Y I+   + L  L    QIFVKT  GK
Sbjct: 325 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKETLHLVRLRGGMQIFVKTLTGK 384

Query: 297 TITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           TITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK  TLH+V
Sbjct: 385 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE-TLHLV 442



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 134/361 (37%), Positives = 201/361 (55%), Gaps = 11/361 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECL-LEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKE 240
           +I+ GK+LED +TL+ Y+++ E L L      +QIFV+T   + + LEVE    + +VK 
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKETLHLVRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 178

Query: 241 IVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYV-LDVLPSPFQIFVKTWGGKTIT 299
            + +   +    Q L +AG +LE  +TL+ Y I+   + L  L    QIFVKT  GKTIT
Sbjct: 179 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKETLHLVRLRGGMQIFVKTLTGKTIT 238

Query: 300 LDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPS 359
           L+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK  TLH+V+   
Sbjct: 239 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE-TLHLVVRLR 297

Query: 360 SRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLAD 413
             +          +I+L +  S+  E  K K Q         + L+     L+D RTL+D
Sbjct: 298 GGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 357

Query: 414 Y 414
           Y
Sbjct: 358 Y 358


>gi|261205776|ref|XP_002627625.1| ubiquitin [Ajellomyces dermatitidis SLH14081]
 gi|239592684|gb|EEQ75265.1| ubiquitin [Ajellomyces dermatitidis SLH14081]
          Length = 381

 Score =  234 bits (597), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 144/363 (39%), Positives = 211/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+  + I  +K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDVESGDTIDAVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 131/365 (35%), Positives = 200/365 (54%), Gaps = 14/365 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +     T+  +K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-DVESGDTIDAVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADY 414
           TL+DY
Sbjct: 359 TLSDY 363


>gi|92790172|emb|CAI83755.1| Polyubiqutin 2 [Polyplastron multivesiculatum]
          Length = 346

 Score =  233 bits (594), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 143/342 (41%), Positives = 200/342 (58%), Gaps = 9/342 (2%)

Query: 22  ISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAM 80
           I  D   L FAG +LE  R L DY I+  STLH + +    M++FVK  T +T T+ E  
Sbjct: 1   IPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVE 59

Query: 81  PYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEIL 140
           P  T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +  +
Sbjct: 60  PSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNIQKESTLHLVLRLRGGM 118

Query: 141 SIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDM 200
            IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED++TLA Y++
Sbjct: 119 QIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNI 178

Query: 201 KDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFY 257
           + E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L +
Sbjct: 179 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIF 238

Query: 258 AGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVK 314
           AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+P +T+ +VK K
Sbjct: 239 AGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAK 298

Query: 315 LFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           + DK   P   Q ++FAGK+L +N  LA YNIQK STLH+VL
Sbjct: 299 IQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVL 340



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 126/341 (36%), Positives = 185/341 (54%), Gaps = 13/341 (3%)

Query: 98  IQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVK 157
           I  DQ  L++ GK L ED  T+   NI+ ES +HLV   +  + IFVK  TG+ + LEV+
Sbjct: 1   IPPDQQRLIFAGKQL-EDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 59

Query: 158 HSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQ 214
            S  I +VKA +    G+      +I+ GK+LED++TLA Y+++ E  L +       +Q
Sbjct: 60  PSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQ 119

Query: 215 IFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIK 274
           IFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y I+
Sbjct: 120 IFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQ 179

Query: 275 NNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFA 331
               L +   L    QIFVKT  GKTITL+V+P +T+ +VK K+ DK   P   Q ++FA
Sbjct: 180 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFA 239

Query: 332 GKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKF 391
           GK+L +N  LA YNIQK STLH+VL     +          +I+L +  S+  +  K K 
Sbjct: 240 GKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKI 299

Query: 392 Q------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           Q         + L+     L+D+RTLADY +     + LV 
Sbjct: 300 QDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVL 340



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/283 (39%), Positives = 161/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE  R L DY I+  STLH + +  
Sbjct: 56  LEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLR 115

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 116 GGMQIFVKTLTGKTIT-LEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTL 173

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 174 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQ 233

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED++TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 234 QRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTID 293

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 294 NVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTL 336


>gi|2654141|gb|AAB87694.1| polyubiquitin [Amoeba proteus]
          Length = 382

 Score =  232 bits (591), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 141/363 (38%), Positives = 212/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+  + I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPGDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRSLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  ++ N+K  IQ KEGI  DQ  L++ GK L ED  ++
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPGDSIDNVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRSL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+   +I +VK  +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPGDSIDNVKQKIQDKEGIPPDG 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED  +L+ Y+++ E  L +       +QIF++T   + + LEVE    + 
Sbjct: 193 QGLIFAGKQLEDGGSLSDYNIQKESTLHLVLRLRGGMQIFIKTLTGKTITLEVEPGDSID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VKE + +   +    Q L +AG +LE  ++L+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKEKIQDKEGIPPDQQRLIFAGKQLEDGRSLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +++ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPGDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRSLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 102/291 (35%), Positives = 159/291 (54%), Gaps = 20/291 (6%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+   +I +VK  +    G+      +I+ GK+LED ++L+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPGDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRSLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK+ + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPGDSIDNVKQKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  ++L+ Y I+    L +   L    QIFVKT  GKTITL+V+P +++ +VK 
Sbjct: 121 FAGKQLEDGRSLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPGDSIDNVKQ 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFI--- 370
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL    R+     IFI   
Sbjct: 181 KIQDKEGIPPDGQGLIFAGKQLEDGGSLSDYNIQKESTLHLVL----RLRGGMQIFIKTL 236

Query: 371 -DPSISLSI----SISEVKE--MAKVKFQAAVKELLVDQVALQDDRTLADY 414
              +I+L +    SI  VKE    K       + L+     L+D R+L+DY
Sbjct: 237 TGKTITLEVEPGDSIDNVKEKIQDKEGIPPDQQRLIFAGKQLEDGRSLSDY 287


>gi|392569337|gb|EIW62510.1| ubiquitin 10.1 [Trametes versicolor FP-101664 SS1]
          Length = 463

 Score =  231 bits (589), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 160/445 (35%), Positives = 238/445 (53%), Gaps = 21/445 (4%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPF------Q 287
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L   F      Q
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGAFRVLDSMQ 312

Query: 288 IFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQ 347
           IFVK   G+TITL+V+  +T+ DVK K+ +        Q ++FA K+L +   L+ YNIQ
Sbjct: 313 IFVKWLHGRTITLEVRSSDTIDDVKAKIQEIEGISPDRQRLIFASKQLDDGRTLSDYNIQ 372

Query: 348 KHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVD 401
           K STLH+VL     +          +I+L +  S+  +  K K Q         + L+  
Sbjct: 373 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 432

Query: 402 QVALQDDRTLADYGMDLSEKVVLVF 426
              L+D RTL+DY +     + LV 
Sbjct: 433 GKQLEDGRTLSDYNIQKESTLHLVL 457



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 139/383 (36%), Positives = 209/383 (54%), Gaps = 20/383 (5%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSS--RIIELPLIFI----DPSISLSISISEVKEMAKVKFQ------AAVKELLVDQV 403
           L      R+++   IF+      +I+L +  S+  +  K K Q         + L+    
Sbjct: 299 LRLRGAFRVLDSMQIFVKWLHGRTITLEVRSSDTIDDVKAKIQEIEGISPDRQRLIFASK 358

Query: 404 ALQDDRTLADYGMDLSEKVVLVF 426
            L D RTL+DY +     + LV 
Sbjct: 359 QLDDGRTLSDYNIQKESTLHLVL 381


>gi|388578851|gb|EIM19184.1| ubiquitin [Wallemia sebi CBS 633.66]
          Length = 701

 Score =  231 bits (589), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 158/468 (33%), Positives = 236/468 (50%), Gaps = 56/468 (11%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 218 LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 277

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 278 GGMQIFVKTLTGKTITL-EVESQDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 335

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + +FVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 336 SDYNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQ 395

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM------------------------------- 208
             +I+ GK+LED +TL+ Y+++ E  L +                               
Sbjct: 396 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIPPDQQRLIFAGKQLEDGRTLSDY 455

Query: 209 -------------FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDL 255
                            +Q+FV+T   + + LEVE    + +VK  + +   +    Q L
Sbjct: 456 NIQKESTLHLVLRLRGGMQVFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 515

Query: 256 FYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVK 312
            +AG +LE  +TL+ Y I+    L +   L    Q+FVKT  GKTITL+V+  +T+ +VK
Sbjct: 516 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLEVESSDTIDNVK 575

Query: 313 VKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDP 372
            K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          
Sbjct: 576 TKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQVFVKTLTGK 635

Query: 373 SISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADY 414
           +I+L +  S+  +  K K Q         + L+     L+D RTL+DY
Sbjct: 636 TITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 683



 Score =  224 bits (572), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 153/424 (36%), Positives = 221/424 (52%), Gaps = 34/424 (8%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESQDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+    I +VK  +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESQDTIDNVKTKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVK 239
             +I+ GK+LED                       +FV+T   + + LEVE    + +VK
Sbjct: 193 QRLIFAGKQLEDG----------------------LFVKTLTGKTITLEVESSDTIDNVK 230

Query: 240 EIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGK 296
             + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GK
Sbjct: 231 TKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 290

Query: 297 TITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           TITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 291 TITLEVESQDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 350

Query: 357 APSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRT 410
                +          +I+L +  S+  +  K K Q         + L+     L+D RT
Sbjct: 351 RLRGGMQVFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 410

Query: 411 LADY 414
           L+DY
Sbjct: 411 LSDY 414



 Score =  221 bits (563), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 143/403 (35%), Positives = 212/403 (52%), Gaps = 48/403 (11%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+  + I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 294 LEVESQDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 353

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLK------ 113
             M++FVK  T +T T+ E     T+ N+KT IQ KEGI  DQ  L++ GK L+      
Sbjct: 354 GGMQVFVKTLTGKTITL-EVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 412

Query: 114 ----------------------------------EDTATMTSMNIKSESIIHLVFCPKEI 139
                                             ED  T++  NI+ ES +HLV   +  
Sbjct: 413 DYNIQKESTLHLVLRLRGGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 472

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + +FVK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 473 MQVFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 532

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +Q+FV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 533 IQKESTLHLVLRLRGGMQVFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLI 592

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    Q+FVKT  GKTITL+V+  +T+ +VK 
Sbjct: 593 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLEVESSDTIDNVKT 652

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 653 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 695



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/338 (28%), Positives = 155/338 (45%), Gaps = 63/338 (18%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + +FVK  TG+ + L+V+ S  I +VK  +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQVFVKTLTGKTITLDVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESQDTIDNVKTKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESQDTIDNVKT 180

Query: 314 KLFDKLQTP----------------------------LHLQS------------------ 327
           K+ DK   P                            L ++S                  
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGLFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIP 240

Query: 328 -----IVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISE 382
                ++FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +   +
Sbjct: 241 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESQD 300

Query: 383 VKEMAKVKFQ------AAVKELLVDQVALQDDRTLADY 414
             +  K K Q         + L+     L+D RTL+DY
Sbjct: 301 TIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 338


>gi|297847850|ref|XP_002891806.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297337648|gb|EFH68065.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 384

 Score =  231 bits (588), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 145/363 (39%), Positives = 207/363 (57%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I N+KA I   EGI  D   L F+G  L+ GR L DY I+  S LH   +  
Sbjct: 17  LDVESSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYSIQKESILHLALRLR 76

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++F+K  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 77  GGMQIFIKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 134

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 135 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 194

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 195 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 254

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           ++K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 255 NLKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 314

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 315 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 374

Query: 354 MVL 356
           +VL
Sbjct: 375 LVL 377



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 133/377 (35%), Positives = 202/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M+++ K  T +T T+ +     T+ N+K  IQ  EGI  DQ  L++ GKLL +D  T+  
Sbjct: 3   MQIYAKTLTEKTITL-DVESSDTINNVKAKIQDIEGIPLDQQRLIFSGKLL-DDGRTLAD 60

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            +I+ ESI+HL    +  + IF+K  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 61  YSIQKESILHLALRLRGGMQIFIKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 120

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 121 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 180

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 181 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 240

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ ++K K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 241 KTITLEVESSDTIDNLKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 300

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 301 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 360

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 361 TLADYNIQKESTLHLVL 377



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 157/300 (52%), Gaps = 12/300 (4%)

Query: 139 ILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFY 198
           ++ I+ K  T + + L+V+ S  I +VKA +  + G+      +I+ GK L+D +TLA Y
Sbjct: 2   LMQIYAKTLTEKTITLDVESSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADY 61

Query: 199 DMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDL 255
            ++ E +L +       +QIF++T   + + LEVE    + +VK  + +   +    Q L
Sbjct: 62  SIQKESILHLALRLRGGMQIFIKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 121

Query: 256 FYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVK 312
            +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK
Sbjct: 122 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 181

Query: 313 VKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDP 372
            K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          
Sbjct: 182 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 241

Query: 373 SISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           +I+L +  S+  +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 242 TITLEVESSDTIDNLKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 301


>gi|6118549|gb|AAF04147.1| ubiquitin precursor [Hevea brasiliensis]
          Length = 381

 Score =  227 bits (578), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 147/364 (40%), Positives = 207/364 (56%), Gaps = 11/364 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
             M++FVK  T +T T+ VE+    T+ N+K  IQ KEGI  DQ   ++ GK L ED  T
Sbjct: 75  GGMQIFVKTLTGKTITLGVES--SDTIDNVKAKIQDKEGIPPDQQRFIFAGKQL-EDGRT 131

Query: 119 MTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAA 178
           +   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+   
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD 191

Query: 179 DHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVV 235
              +I+ G  L     LA Y+++ E  L +       +QIFV+T   + + LEVE    +
Sbjct: 192 QQRLIFAGSSLRMVAPLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 251

Query: 236 RDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKT 292
            +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT
Sbjct: 252 DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKT 311

Query: 293 WGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTL 352
             GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STL
Sbjct: 312 LTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 371

Query: 353 HMVL 356
           H+VL
Sbjct: 372 HLVL 375



 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 137/377 (36%), Positives = 198/377 (52%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + L V+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLGVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
            I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 FIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG+ L     LA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGSSLRMVAPLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>gi|330797961|ref|XP_003287025.1| ubiquitin [Dictyostelium purpureum]
 gi|325082988|gb|EGC36453.1| ubiquitin [Dictyostelium purpureum]
          Length = 365

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 143/363 (39%), Positives = 208/363 (57%), Gaps = 25/363 (6%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +                K E  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKTKIQD----------------KEEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 296

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 297 TGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 356

Query: 354 MVL 356
           +VL
Sbjct: 357 LVL 359



 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 128/365 (35%), Positives = 193/365 (52%), Gaps = 30/365 (8%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+KT IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+++VK K+ DK +                +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEGSDTIENVKTKIQDKEE----------------DGRTLSDYNIQKESTLHLV 282

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 283 LRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGR 342

Query: 410 TLADY 414
           TL+DY
Sbjct: 343 TLSDY 347


>gi|118370592|ref|XP_001018497.1| Ubiquitin family protein [Tetrahymena thermophila]
 gi|89300264|gb|EAR98252.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
          Length = 384

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 138/358 (38%), Positives = 210/358 (58%), Gaps = 9/358 (2%)

Query: 6   SEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKL 64
           S+ I+++KA I  KEGI  D   L FAG +L+ GR L DY I+  STLH + +    M++
Sbjct: 20  SDSIQDVKAKIQDKEGIPPDQQRLIFAGKQLDDGRSLSDYNIQKESTLHLVLRLRGGMQI 79

Query: 65  FVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNI 124
           FVK  T +T T+ +  P  TV+N+K  IQ KEGI  DQ  L++ GK L +D+ T++  NI
Sbjct: 80  FVKTLTGKTVTL-DLEPCDTVENVKAKIQDKEGIPPDQQRLIFAGKQL-DDSRTLSDYNI 137

Query: 125 KSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIY 184
           + ES +HLV   +  + IFVK  TG+ V L+++ S  I ++KA +    G+      +I+
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTVTLDIEASDTIENIKAKIQDKEGIPPDQQRLIF 197

Query: 185 EGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEI 241
            GK+L+D +T+  Y+++ E  L +       +QIFV+T   + V L+++    + +VK  
Sbjct: 198 AGKQLDDGRTVQDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTVTLDLDPCDTIENVKAK 257

Query: 242 VANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTI 298
           + +   +    Q L +AG +L+  +TL+ Y I+    L +   L    QIFVKT  GKTI
Sbjct: 258 IQDKERIPPDQQRLIFAGKQLDDSRTLSDYNIQRESTLHLVLRLRGGMQIFVKTLTGKTI 317

Query: 299 TLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           TLDV+  +T+ +VK K+ DK   P   Q ++F+GK L +   L  YNIQK STLH+VL
Sbjct: 318 TLDVESSDTIDNVKAKIQDKEGIPPDQQRLIFSGKCLEDTRKLTDYNIQKESTLHLVL 375



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/377 (32%), Positives = 205/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+   +   ++Q++K  IQ KEGI  DQ  L++ GK L +D  +++ 
Sbjct: 1   MQIFVKTLTGKTITLNTEVS-DSIQDVKAKIQDKEGIPPDQQRLIFAGKQL-DDGRSLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ V L+++    + +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTVTLDLEPCDTVENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+L+DS+TL+ Y+++ E  L +       +QIFV+T   + V L++E    + ++
Sbjct: 119 LIFAGKQLDDSRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTVTLDIEASDTIENI 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +L+  +T+  Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLDDGRTVQDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KT+TLD+ P +T+++VK K+ DK + P   Q ++FAGK+L ++  L+ YNIQ+ STLH+V
Sbjct: 239 KTVTLDLDPCDTIENVKAKIQDKERIPPDQQRLIFAGKQLDDSRTLSDYNIQRESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLDVESSDTIDNVKAKIQDKEGIPPDQQRLIFSGKCLEDTR 358

Query: 410 TLADYGMDLSEKVVLVF 426
            L DY +     + LV 
Sbjct: 359 KLTDYNIQKESTLHLVL 375


>gi|1101011|gb|AAC46935.1| polyubiquitin, partial [Trichomonas vaginalis]
          Length = 770

 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 158/441 (35%), Positives = 237/441 (53%), Gaps = 19/441 (4%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ ++ I+++KA I  KEGI  D   L FAG +LE G  L DY I+ +STLH + +  
Sbjct: 328 LEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLR 387

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +  T+ E  P   ++++K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 388 GGMQIFVKTLTGKHITL-EVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQL-EDGNTL 445

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              +I+ +S +HLV   +  + IFVK  TG+ + LEV+ +  I DVKA +    G+    
Sbjct: 446 QDYSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQ 505

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED  TL  Y ++ +  L +       +QIFV+T   + + LEVE    + 
Sbjct: 506 QRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIE 565

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           DVK  + +   +    Q L +AG +LE   TL  Y I+ +  L +   L    QIFVKT 
Sbjct: 566 DVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLRGGMQIFVKTL 625

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GK ITL+V+P + ++DVK K+ DK   P   Q ++FAGK+L + + L  Y+IQK STLH
Sbjct: 626 TGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLH 685

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAAVKE--------LLVDQVAL 405
           +VL     +           I+L +  ++  E  K K Q  VKE        L+     L
Sbjct: 686 LVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQ--VKEGIPPDQQGLIFAGKQL 743

Query: 406 QDDRTLADYGMDLSEKVVLVF 426
           +D +TL DY +     + LV 
Sbjct: 744 EDGKTLQDYSIQKDSTLHLVL 764



 Score =  225 bits (573), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 155/439 (35%), Positives = 234/439 (53%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ ++ I+++KA I  KEGI  D   L FAG +LE G  L DY I+ +STLH + +  
Sbjct: 24  LEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLR 83

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +  T+ E  P   ++++K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 84  GGMQIFVKTLTGKHITL-EVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQL-EDGNTL 141

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              +I+ +S +HLV   +  + IFVK  TG+ + LEV+ +  I DVKA +    G+    
Sbjct: 142 QDYSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQ 201

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED  TL  Y ++ +  L +       +QIFV+T   + + LEVE    + 
Sbjct: 202 QRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIE 261

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           DVK  + +   +    Q L +AG +LE   TL  Y I+ +  L +   L    QIFVKT 
Sbjct: 262 DVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLRGGMQIFVKTL 321

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GK ITL+V+P + ++DVK K+ DK   P   Q ++FAGK+L + + L  Y+IQK STLH
Sbjct: 322 TGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLH 381

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +           I+L +  ++  E  K K Q         + L+     L+D
Sbjct: 382 LVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLED 441

Query: 408 DRTLADYGMDLSEKVVLVF 426
             TL DY +     + LV 
Sbjct: 442 GNTLQDYSIQKDSTLHLVL 460



 Score =  225 bits (573), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 155/439 (35%), Positives = 234/439 (53%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ ++ I+++KA I  KEGI  D   L FAG +LE G  L DY I+ +STLH + +  
Sbjct: 100 LEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLR 159

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +  T+ E  P   ++++K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 160 GGMQIFVKTLTGKHITL-EVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQL-EDGNTL 217

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              +I+ +S +HLV   +  + IFVK  TG+ + LEV+ +  I DVKA +    G+    
Sbjct: 218 QDYSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQ 277

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED  TL  Y ++ +  L +       +QIFV+T   + + LEVE    + 
Sbjct: 278 QRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIE 337

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           DVK  + +   +    Q L +AG +LE   TL  Y I+ +  L +   L    QIFVKT 
Sbjct: 338 DVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLRGGMQIFVKTL 397

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GK ITL+V+P + ++DVK K+ DK   P   Q ++FAGK+L + + L  Y+IQK STLH
Sbjct: 398 TGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLH 457

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +           I+L +  ++  E  K K Q         + L+     L+D
Sbjct: 458 LVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLED 517

Query: 408 DRTLADYGMDLSEKVVLVF 426
             TL DY +     + LV 
Sbjct: 518 GNTLQDYSIQKDSTLHLVL 536



 Score =  225 bits (573), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 155/439 (35%), Positives = 234/439 (53%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ ++ I+++KA I  KEGI  D   L FAG +LE G  L DY I+ +STLH + +  
Sbjct: 176 LEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLR 235

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +  T+ E  P   ++++K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 236 GGMQIFVKTLTGKHITL-EVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQL-EDGNTL 293

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              +I+ +S +HLV   +  + IFVK  TG+ + LEV+ +  I DVKA +    G+    
Sbjct: 294 QDYSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQ 353

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED  TL  Y ++ +  L +       +QIFV+T   + + LEVE    + 
Sbjct: 354 QRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIE 413

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           DVK  + +   +    Q L +AG +LE   TL  Y I+ +  L +   L    QIFVKT 
Sbjct: 414 DVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLRGGMQIFVKTL 473

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GK ITL+V+P + ++DVK K+ DK   P   Q ++FAGK+L + + L  Y+IQK STLH
Sbjct: 474 TGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLH 533

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +           I+L +  ++  E  K K Q         + L+     L+D
Sbjct: 534 LVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLED 593

Query: 408 DRTLADYGMDLSEKVVLVF 426
             TL DY +     + LV 
Sbjct: 594 GNTLQDYSIQKDSTLHLVL 612



 Score =  225 bits (573), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 155/439 (35%), Positives = 234/439 (53%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ ++ I+++KA I  KEGI  D   L FAG +LE G  L DY I+ +STLH + +  
Sbjct: 252 LEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLR 311

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +  T+ E  P   ++++K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 312 GGMQIFVKTLTGKHITL-EVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQL-EDGNTL 369

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              +I+ +S +HLV   +  + IFVK  TG+ + LEV+ +  I DVKA +    G+    
Sbjct: 370 QDYSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQ 429

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED  TL  Y ++ +  L +       +QIFV+T   + + LEVE    + 
Sbjct: 430 QRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIE 489

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           DVK  + +   +    Q L +AG +LE   TL  Y I+ +  L +   L    QIFVKT 
Sbjct: 490 DVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLRGGMQIFVKTL 549

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GK ITL+V+P + ++DVK K+ DK   P   Q ++FAGK+L + + L  Y+IQK STLH
Sbjct: 550 TGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLH 609

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +           I+L +  ++  E  K K Q         + L+     L+D
Sbjct: 610 LVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLED 669

Query: 408 DRTLADYGMDLSEKVVLVF 426
             TL DY +     + LV 
Sbjct: 670 GNTLQDYSIQKDSTLHLVL 688



 Score =  187 bits (475), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 130/377 (34%), Positives = 196/377 (51%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +  T+ E  P   ++++K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 10  MQIFVKTLTGKHITL-EVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQL-EDGNTLQD 67

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            +I+ +S +HLV   +  + IFVK  TG+ + LEV+ +  I DVKA +    G+      
Sbjct: 68  YSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQR 127

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED  TL  Y ++ +  L +       +QIFV+T   + + LEVE    + DV
Sbjct: 128 LIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDV 187

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE   TL  Y I+ +  L +   L    QIFVKT  G
Sbjct: 188 KAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLRGGMQIFVKTLTG 247

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           K ITL+V+P + ++DVK K+ DK   P   Q ++FAGK+L + + L  Y+IQK STLH+V
Sbjct: 248 KHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLV 307

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +           I+L +  ++  E  K K Q         + L+     L+D  
Sbjct: 308 LRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGN 367

Query: 410 TLADYGMDLSEKVVLVF 426
           TL DY +     + LV 
Sbjct: 368 TLQDYSIQKDSTLHLVL 384



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 104/308 (33%), Positives = 155/308 (50%), Gaps = 12/308 (3%)

Query: 131 HLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLE 190
           HLV   +  + IFVK  TG+ + LEV+ +  I DVKA +    G+      +I+ GK+LE
Sbjct: 1   HLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLE 60

Query: 191 DSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIID 247
           D  TL  Y ++ +  L +       +QIFV+T   + + LEVE    + DVK  + +   
Sbjct: 61  DGNTLQDYSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEG 120

Query: 248 LSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQP 304
           +    Q L +AG +LE   TL  Y I+ +  L +   L    QIFVKT  GK ITL+V+P
Sbjct: 121 IPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEP 180

Query: 305 YNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIE 364
            + ++DVK K+ DK   P   Q ++FAGK+L + + L  Y+IQK STLH+VL     +  
Sbjct: 181 TDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLRGGMQI 240

Query: 365 LPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDL 418
                    I+L +  ++  E  K K Q         + L+     L+D  TL DY +  
Sbjct: 241 FVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQK 300

Query: 419 SEKVVLVF 426
              + LV 
Sbjct: 301 DSTLHLVL 308


>gi|336372502|gb|EGO00841.1| hypothetical protein SERLA73DRAFT_121253 [Serpula lacrymans var.
           lacrymans S7.3]
          Length = 371

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 142/363 (39%), Positives = 206/363 (56%), Gaps = 19/363 (5%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ           +   T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQ-----------QHGRTL 122

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 123 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 182

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 183 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 242

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 243 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 302

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 303 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 362

Query: 354 MVL 356
           +VL
Sbjct: 363 LVL 365



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 130/377 (34%), Positives = 196/377 (51%), Gaps = 24/377 (6%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ-- 116

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
                   +  +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 117 --------QHGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 168

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 169 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 228

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 229 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 288

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 289 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 348

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 349 TLSDYNIQKESTLHLVL 365


>gi|224079387|ref|XP_002305847.1| predicted protein [Populus trichocarpa]
 gi|222848811|gb|EEE86358.1| predicted protein [Populus trichocarpa]
          Length = 369

 Score =  225 bits (574), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 138/356 (38%), Positives = 211/356 (59%), Gaps = 5/356 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRL-EAGRLVDYGIRNNSTLHFLHQNL 59
           MKV++S+ I  +K+    KEGI +   +LFF GDRL +  R+VDYGI  ++TLH + Q+ 
Sbjct: 13  MKVQRSDTIGTIKSAFCEKEGIPKSFQELFFNGDRLKDDQRVVDYGIPKDATLHMILQSS 72

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             +KL V IP+ Q + VVEA  Y TVQ IK +I  KE I   Q+ LVY G++L ED  ++
Sbjct: 73  VGVKLLVVIPSRQKSVVVEARTYDTVQKIKAVILEKEQILPHQYNLVYAGEVL-EDDRSL 131

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
            S+N++SE  +HL+F PK++LS  V    GE V L+VK  +++ +VKAI+G V+GV  +D
Sbjct: 132 ASLNLQSEPTLHLIFNPKDLLSFSVITPAGETVKLKVKFLYSVSEVKAIIGGVIGVPVSD 191

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVK 239
           + +IY+GKKLEDS +LA  D+++E +LEM P + Q+FV+    + + L V     V DVK
Sbjct: 192 YDLIYQGKKLEDSNSLACCDLQEESILEMSPQTFQVFVKAWSGKTITLNVHQRDTVEDVK 251

Query: 240 EIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVLPSPFQIFVKTWGGKTIT 299
           + +   +      Q + ++G +LEA   LA Y I+ N  L ++ SP  I  K  G   I 
Sbjct: 252 DKIFQKLGGPSYCQSIVFSGKRLEANLDLAYYNIRKNATLHMVFSPSTITTKM-GLSQIG 310

Query: 300 LDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
            +      ++D+K  + +KL  P  ++ + F    L +   +A YNI +   L +V
Sbjct: 311 AEPNSSARIRDLKAMIQNKL--PSTVKEVYFREIPLQDECSIASYNIGESDELTVV 364



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/368 (32%), Positives = 205/368 (55%), Gaps = 8/368 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M +++K+    T  V  +    T+  IK+    KEGI      L ++G  LK+D   +  
Sbjct: 1   MTIYLKVMKTSTMKVQRS---DTIGTIKSAFCEKEGIPKSFQELFFNGDRLKDD-QRVVD 56

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGE-IVNLEVKHSFAIRDVKAIVGSVVGVSAADH 180
             I  ++ +H++      + + V   + +  V +E +    ++ +KA++     +    +
Sbjct: 57  YGIPKDATLHMILQSSVGVKLLVVIPSRQKSVVVEARTYDTVQKIKAVILEKEQILPHQY 116

Query: 181 IMIYEGKKLEDSKTLAFYDMKDECLLEMF--PSSIQIF-VRTPIEEIVRLEVEVLIVVRD 237
            ++Y G+ LED ++LA  +++ E  L +   P  +  F V TP  E V+L+V+ L  V +
Sbjct: 117 NLVYAGEVLEDDRSLASLNLQSEPTLHLIFNPKDLLSFSVITPAGETVKLKVKFLYSVSE 176

Query: 238 VKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVLPSPFQIFVKTWGGKT 297
           VK I+  +I + + + DL Y G KLE   +LA   ++   +L++ P  FQ+FVK W GKT
Sbjct: 177 VKAIIGGVIGVPVSDYDLIYQGKKLEDSNSLACCDLQEESILEMSPQTFQVFVKAWSGKT 236

Query: 298 ITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLA 357
           ITL+V   +TV+DVK K+F KL  P + QSIVF+GKRL  N  LA YNI+K++TLHMV +
Sbjct: 237 ITLNVHQRDTVEDVKDKIFQKLGGPSYCQSIVFSGKRLEANLDLAYYNIRKNATLHMVFS 296

Query: 358 PSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAAVKELLVDQVALQDDRTLADYGMD 417
           PS+   ++ L  I    + S  I ++K M + K  + VKE+   ++ LQD+ ++A Y + 
Sbjct: 297 PSTITTKMGLSQIGAEPNSSARIRDLKAMIQNKLPSTVKEVYFREIPLQDECSIASYNIG 356

Query: 418 LSEKVVLV 425
            S+++ +V
Sbjct: 357 ESDELTVV 364


>gi|328864943|gb|EGG13329.1| hypothetical protein DFA_11090 [Dictyostelium fasciculatum]
          Length = 356

 Score =  224 bits (571), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 141/363 (38%), Positives = 204/363 (56%), Gaps = 34/363 (9%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T                 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKT----------------- 235

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
                   +  +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 236 --------LTGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 287

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 288 TGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 347

Query: 354 MVL 356
           +VL
Sbjct: 348 LVL 350



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 125/377 (33%), Positives = 187/377 (49%), Gaps = 39/377 (10%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+KT IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
                                     P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 -------------------------IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 273

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 274 LRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGR 333

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 334 TLSDYNIQKESTLHLVL 350


>gi|578546|emb|CAA84814.1| ubiquitin [Tetrahymena pyriformis]
          Length = 379

 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 132/363 (36%), Positives = 208/363 (57%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGRLV-DYGIRNNSTLHFLHQNL 59
           + V  ++ I+N+K  I  KEGI  D   L FAG +LE GR V DY I+  ST+H + +  
Sbjct: 15  LDVASTDNIENIKQKIQDKEGIPSDQQRLIFAGKQLEEGRTVSDYNIQKESTVHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ +      ++NIK  IQ KEGI SDQ  L++ GK L ED  T+
Sbjct: 75  GGMQVFVKTLTGKTITL-DVAQTDNIENIKAKIQDKEGIPSDQQRLIFAGKQL-EDGRTV 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + +FVK  TG+ + LEV  S  I  +K+ +    G+ +  
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLEVNSSDNIESIKSKIQDKEGIPSDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED + ++ Y+++ E  L +       +Q+FV+T   + + L+V+    + 
Sbjct: 193 QRLIFAGKQLEDGRNISDYNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLDVDSSDNIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +T++ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPSDQQRLIFAGKQLEDGRTVSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKT+TLD+   + +++VK K+ DK   P   Q ++FAGK+L +   ++ YNI K STLH
Sbjct: 313 TGKTLTLDINSTDNIENVKAKIQDKEGIPTDQQRLIFAGKQLEDGRTVSDYNISKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 122/377 (32%), Positives = 202/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +      ++NIK  IQ KEGI SDQ  L++ GK L E+  T++ 
Sbjct: 1   MQIFVKTLTGKTVTL-DVASTDNIENIKQKIQDKEGIPSDQQRLIFAGKQL-EEGRTVSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + +FVK  TG+ + L+V  +  I ++KA +    G+ +    
Sbjct: 59  YNIQKESTVHLVLRLRGGMQVFVKTLTGKTITLDVAQTDNIENIKAKIQDKEGIPSDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +T++ Y+++ E  L +       +Q+FV+T   + + LEV     +  +
Sbjct: 119 LIFAGKQLEDGRTVSDYNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLEVNSSDNIESI 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  + ++ Y I+    L +   L    Q+FVKT  G
Sbjct: 179 KSKIQDKEGIPSDQQRLIFAGKQLEDGRNISDYNIQKESTLHLVLRLRGGMQVFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITLDV   + +++VK K+ DK   P   Q ++FAGK+L +   ++ YNIQK STLH+V
Sbjct: 239 KTITLDVDSSDNIENVKAKIQDKEGIPSDQQRLIFAGKQLEDGRTVSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +++L I+ ++  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTLTLDINSTDNIENVKAKIQDKEGIPTDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           T++DY +     + LV 
Sbjct: 359 TVSDYNISKESTLHLVL 375


>gi|281211832|gb|EFA85994.1| hypothetical protein PPL_01227 [Polysphondylium pallidum PN500]
          Length = 385

 Score =  221 bits (564), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 142/369 (38%), Positives = 212/369 (57%), Gaps = 18/369 (4%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQF------TLVYDGKLLK 113
             M++FVK  T +T T+ E     T++N+KT IQ   G ++          L++ GK L 
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEGSDTIENVKTKIQ---GYRARMVFHPINQRLIFAGKQL- 129

Query: 114 EDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVV 173
           ED  T++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    
Sbjct: 130 EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKE 189

Query: 174 GVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVE 230
           G+      +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE
Sbjct: 190 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 249

Query: 231 VLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQ 287
               + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    Q
Sbjct: 250 GSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 309

Query: 288 IFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQ 347
           IFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQ
Sbjct: 310 IFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 369

Query: 348 KHSTLHMVL 356
           K STLH+VL
Sbjct: 370 KESTLHLVL 378



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 138/383 (36%), Positives = 207/383 (54%), Gaps = 23/383 (6%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+KT IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAA--- 178
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK     + G  A    
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKT---KIQGYRARMVF 115

Query: 179 ---DHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVL 232
              +  +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE  
Sbjct: 116 HPINQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGS 175

Query: 233 IVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIF 289
             + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIF
Sbjct: 176 DTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF 235

Query: 290 VKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKH 349
           VKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK 
Sbjct: 236 VKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 295

Query: 350 STLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQV 403
           STLH+VL     +          +I+L +  S+  E  K K Q         + L+    
Sbjct: 296 STLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGK 355

Query: 404 ALQDDRTLADYGMDLSEKVVLVF 426
            L+D RTL+DY +     + LV 
Sbjct: 356 QLEDGRTLSDYNIQKESTLHLVL 378


>gi|118370604|ref|XP_001018503.1| Ubiquitin family protein [Tetrahymena thermophila]
 gi|89300270|gb|EAR98258.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
          Length = 384

 Score =  220 bits (561), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 135/358 (37%), Positives = 208/358 (58%), Gaps = 9/358 (2%)

Query: 6   SEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKL 64
           S+ I+ +KA I  KEGI  D   L FAG +L+ G+ L DY I+  STLH + +    M++
Sbjct: 20  SDTIEGIKAKIQDKEGIPPDQQRLIFAGKQLDDGKTLSDYNIQKESTLHLVLRLRGGMQI 79

Query: 65  FVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNI 124
           FVK  T +T T+ +  P  T++N+K  IQ KEGI  DQ  L++ GK L +D+ T++  NI
Sbjct: 80  FVKTLTGKTVTL-DLEPCDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-DDSKTISDYNI 137

Query: 125 KSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIY 184
             ES +HLV   +  + IFVK  TG+ + L+++ S  I +VK+ +    G+      +I+
Sbjct: 138 SKESTLHLVLRLRGGMQIFVKTLTGKTITLDLEVSDTIENVKSKIQDKEGIPPDQQRLIF 197

Query: 185 EGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEI 241
            GK+L+D K L+ Y+++ E  L +       +QIFV+T   + V L++E    + +VK  
Sbjct: 198 AGKQLDDGKILSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTVTLDLESCDTIENVKAK 257

Query: 242 VANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTI 298
           + +   +    Q L +AG +L+  KT++ Y I     L +   L    QIFVKT  GKTI
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLDDSKTISDYNISKESTLHLVLRLRGGMQIFVKTLTGKTI 317

Query: 299 TLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           TLD++  +T+++VK K+ DK   P   Q ++F+GK L +   L+ YNIQK  TLH+VL
Sbjct: 318 TLDLEASDTIENVKSKIQDKEGIPPDQQRLIFSGKCLEDTRTLSDYNIQKEQTLHLVL 375



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 128/377 (33%), Positives = 205/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+   +   T++ IK  IQ KEGI  DQ  L++ GK L +D  T++ 
Sbjct: 1   MQIFVKTLTRKTITLGLEVS-DTIEGIKAKIQDKEGIPPDQQRLIFAGKQL-DDGKTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ V L+++    I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTVTLDLEPCDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+L+DSKT++ Y++  E  L +       +QIFV+T   + + L++EV   + +V
Sbjct: 119 LIFAGKQLDDSKTISDYNISKESTLHLVLRLRGGMQIFVKTLTGKTITLDLEVSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +L+  K L+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLDDGKILSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KT+TLD++  +T+++VK K+ DK   P   Q ++FAGK+L ++  ++ YNI K STLH+V
Sbjct: 239 KTVTLDLESCDTIENVKAKIQDKEGIPPDQQRLIFAGKQLDDSKTISDYNISKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLDLEASDTIENVKSKIQDKEGIPPDQQRLIFSGKCLEDTR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +   + + LV 
Sbjct: 359 TLSDYNIQKEQTLHLVL 375


>gi|197129055|gb|ACH45553.1| putative ubiquitin C variant 2 [Taeniopygia guttata]
 gi|197129057|gb|ACH45555.1| putative ubiquitin C variant 2 [Taeniopygia guttata]
          Length = 412

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 135/339 (39%), Positives = 200/339 (58%), Gaps = 9/339 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAG 332
            G+TITL+V+P +T+++VK K+ DK   P   Q ++FAG
Sbjct: 313 TGRTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAG 351



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 129/337 (38%), Positives = 192/337 (56%), Gaps = 8/337 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ 392
           L     +          +I+L +  S+  E  K K Q
Sbjct: 299 LRLRGGMQIFVKTLTGRTITLEVEPSDTIENVKAKIQ 335



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 103/264 (39%), Positives = 153/264 (57%), Gaps = 6/264 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T     + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGRTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGT 260
           +VK  + +   +    Q L +AG+
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGS 352



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 160/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|578545|emb|CAA84813.1| ubiquitin [Tetrahymena pyriformis]
          Length = 379

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 134/363 (36%), Positives = 208/363 (57%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGRLV-DYGIRNNSTLHFLHQNL 59
           + V  ++ I+N+K  I  KEGI  D   L FAG +LE GR V DY I+  ST+H + +  
Sbjct: 15  LDVASTDNIENIKQKIQDKEGIPPDQQRLIFAGKQLEDGRTVSDYNIQKESTVHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ +      ++NIK  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQVFVKTLTGKTITL-DVAQTDNIENIKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTV 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + +F+K  TG+ + L+V  +  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQVFIKTLTGKTITLDVDSADNIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +T++ Y+++ E  L +       +Q+FV+T   + + L+V+    + 
Sbjct: 193 QRLIFAGKQLEDGRTVSDYNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLDVDSSDNIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +T++ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTVSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITLDV   + +++VK K+ DK   P   Q ++FAGK+L +   +A YNI K STLH
Sbjct: 313 TGKTITLDVNSTDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRSIADYNISKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 121/377 (32%), Positives = 202/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +      ++NIK  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTVTL-DVASTDNIENIKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTVSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + +FVK  TG+ + L+V  +  I ++K  +    G+      
Sbjct: 59  YNIQKESTVHLVLRLRGGMQVFVKTLTGKTITLDVAQTDNIENIKQKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +T++ Y+++ E  L +       +Q+F++T   + + L+V+    + +V
Sbjct: 119 LIFAGKQLEDGRTVSDYNIQKESTLHLVLRLRGGMQVFIKTLTGKTITLDVDSADNIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +T++ Y I+    L +   L    Q+FVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTVSDYNIQKESTLHLVLRLRGGMQVFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITLDV   + +++VK K+ DK   P   Q ++FAGK+L +   ++ YNIQK STLH+V
Sbjct: 239 KTITLDVDSSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTVSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L ++ ++  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLDVNSTDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           ++ADY +     + LV 
Sbjct: 359 SIADYNISKESTLHLVL 375


>gi|1684855|gb|AAB36545.1| ubiquitin-like protein [Phaseolus vulgaris]
          Length = 407

 Score =  218 bits (555), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 141/355 (39%), Positives = 201/355 (56%), Gaps = 18/355 (5%)

Query: 17  HVKEGISEDICDL--------FFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVK 67
           H+ EG+   + D+         FA  +LE GR L DY I+  STLH + +    M++FVK
Sbjct: 50  HMVEGVDARLLDVQKGHKGAQCFA-KQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 108

Query: 68  IPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSE 127
             T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ E
Sbjct: 109 TLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKE 166

Query: 128 SIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGK 187
           S +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK
Sbjct: 167 STLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK 226

Query: 188 KLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVAN 244
           +LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +
Sbjct: 227 QLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD 286

Query: 245 IIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLD 301
              +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+
Sbjct: 287 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 346

Query: 302 VQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 347 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 401



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/325 (36%), Positives = 172/325 (52%), Gaps = 12/325 (3%)

Query: 114 EDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVV 173
           ED  T+   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    
Sbjct: 77  EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 136

Query: 174 GVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVE 230
           G+      +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE
Sbjct: 137 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 196

Query: 231 VLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQ 287
               + +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    Q
Sbjct: 197 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQ 256

Query: 288 IFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQ 347
           IFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQ
Sbjct: 257 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 316

Query: 348 KHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVD 401
           K STLH+VL     +          +I+L +  S+  +  K K Q         + L+  
Sbjct: 317 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 376

Query: 402 QVALQDDRTLADYGMDLSEKVVLVF 426
              L+D RTLADY +     + LV 
Sbjct: 377 GKQLEDGRTLADYNIQKESTLHLVL 401



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 111/283 (39%), Positives = 160/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 117 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 176

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 177 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 234

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 235 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 294

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 295 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 354

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 355 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 397



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/252 (35%), Positives = 132/252 (52%), Gaps = 12/252 (4%)

Query: 187 KKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVA 243
           K+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + 
Sbjct: 74  KQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 133

Query: 244 NIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITL 300
           +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL
Sbjct: 134 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL 193

Query: 301 DVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSS 360
           +V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL    
Sbjct: 194 EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 253

Query: 361 RIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADY 414
            +          +I+L +  S+  +  K K Q         + L+     L+D RTLADY
Sbjct: 254 GMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 313

Query: 415 GMDLSEKVVLVF 426
            +     + LV 
Sbjct: 314 NIQKESTLHLVL 325



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 69/198 (34%), Positives = 102/198 (51%), Gaps = 9/198 (4%)

Query: 238 VKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWG 294
           V+ + A ++D+  G++       +LE  +TLA Y I+    L +   L    QIFVKT  
Sbjct: 52  VEGVDARLLDVQKGHKGAQCFAKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLT 111

Query: 295 GKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHM 354
           GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+
Sbjct: 112 GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 171

Query: 355 VLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDD 408
           VL     +          +I+L +  S+  +  K K Q         + L+     L+D 
Sbjct: 172 VLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDG 231

Query: 409 RTLADYGMDLSEKVVLVF 426
           RTLADY +     + LV 
Sbjct: 232 RTLADYNIQKESTLHLVL 249


>gi|578551|emb|CAA80337.1| ubiquitin [Tetrahymena pyriformis]
          Length = 379

 Score =  217 bits (553), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 132/363 (36%), Positives = 209/363 (57%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V +++ ++N+K  I  KEGI  D   L FAG +LE  R L DY I+  STLH + +  
Sbjct: 15  LDVAQTDSVENIKQKIQDKEGIPPDQQRLIFAGKQLEDARTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E      ++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVDSSDNIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTI 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + +FVK  TG+ + L+V+++  I  VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGIYLFVKTLTGKTITLDVEYNDTIEKVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +T++ Y+++ +  L +       +Q+F++T   + + L+V+    + 
Sbjct: 193 QRLIFAGKQLEDGRTVSDYNLQKDSTLHLVLRLRGGMQVFIKTLTGKTITLDVDSSENIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +T++ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTVSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITLDV   + +++VK K+ DK   P   Q ++FAGK+L +   L+ YNI K STLH
Sbjct: 313 TGKTITLDVNSTDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRSLSDYNISKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 127/377 (33%), Positives = 202/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +     +V+NIK  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTVTL-DVAQTDSVENIKQKIQDKEGIPPDQQRLIFAGKQL-EDARTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV  S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVDSSDNIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +T++ Y+++ E  L +       I +FV+T   + + L+VE    +  V
Sbjct: 119 LIFAGKQLEDGRTISDYNIQKESTLHLVLRLRGGIYLFVKTLTGKTITLDVEYNDTIEKV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +T++ Y ++ +  L +   L    Q+F+KT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTVSDYNLQKDSTLHLVLRLRGGMQVFIKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITLDV     +++VK K+ DK   P   Q ++FAGK+L +   ++ YNIQK STLH+V
Sbjct: 239 KTITLDVDSSENIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTVSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L ++ ++  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLDVNSTDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           +L+DY +     + LV 
Sbjct: 359 SLSDYNISKESTLHLVL 375


>gi|92790184|emb|CAI83761.1| Polyubiqutin 2 [Epidinium ecaudatum]
          Length = 322

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 129/317 (40%), Positives = 189/317 (59%), Gaps = 8/317 (2%)

Query: 46  IRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTL 105
           I+  STLH + +    M++FVK  T +T T+ +  P  T++N+K  IQ KEGI  DQ  L
Sbjct: 2   IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-DVEPSDTIENVKAKIQDKEGIPPDQQRL 60

Query: 106 VYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDV 165
           ++ GK L ED  T+   NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +V
Sbjct: 61  IFAGKQL-EDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENV 119

Query: 166 KAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIE 222
           KA +    G+      +I+ GK+LED++TLA Y+++ E  L +       +QIFV+T   
Sbjct: 120 KAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTFTG 179

Query: 223 EIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV- 281
           + + L+VE    + +VK  + +   +    Q L +AG +LE  +TLA Y I+    L + 
Sbjct: 180 KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLV 239

Query: 282 --LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENH 339
             L    QIFVKT  GKTITLDV+P +T+++VK K+ DK   P   Q ++FAGK+L +N 
Sbjct: 240 LRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNR 299

Query: 340 VLARYNIQKHSTLHMVL 356
            LA YNIQK STLH+VL
Sbjct: 300 TLADYNIQKESTLHLVL 316



 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 116/316 (36%), Positives = 174/316 (55%), Gaps = 12/316 (3%)

Query: 123 NIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIM 182
           NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+      +
Sbjct: 1   NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRL 60

Query: 183 IYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVK 239
           I+ GK+LED++TLA Y+++ E  L +       +QIFV+T   + + L+VE    + +VK
Sbjct: 61  IFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVK 120

Query: 240 EIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGK 296
             + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT+ GK
Sbjct: 121 AKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTFTGK 180

Query: 297 TITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           TITLDV+P +T+++VK K+ DK   P   Q ++FAGK+L +N  LA YNIQK STLH+VL
Sbjct: 181 TITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVL 240

Query: 357 APSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRT 410
                +          +I+L +  S+  E  K K Q         + L+     L+D+RT
Sbjct: 241 RLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRT 300

Query: 411 LADYGMDLSEKVVLVF 426
           LADY +     + LV 
Sbjct: 301 LADYNIQKESTLHLVL 316



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/283 (38%), Positives = 162/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I+N+KA I  KEGI  D   L FAG +LE  R L DY I+  STLH + +  
Sbjct: 32  LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLR 91

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T ++  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 92  GGMQIFVKTLTGKTIT-LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTL 149

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+    
Sbjct: 150 ADYNIQKESTLHLVLRLRGGMQIFVKTFTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQ 209

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED++TLA Y+++ E  L +       +QIFV+T   + + L+VE    + 
Sbjct: 210 QRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIE 269

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 270 NVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTL 312


>gi|194944118|ref|XP_001983129.1| GG19855 [Drosophila erecta]
 gi|190647611|gb|EDV45009.1| GG19855 [Drosophila erecta]
          Length = 328

 Score =  214 bits (546), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 130/324 (40%), Positives = 192/324 (59%), Gaps = 9/324 (2%)

Query: 6   SEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKL 64
           S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +    M++
Sbjct: 2   SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 61

Query: 65  FVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNI 124
           FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++  NI
Sbjct: 62  FVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNI 119

Query: 125 KSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIY 184
           + ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+
Sbjct: 120 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF 179

Query: 185 EGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEI 241
            GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  
Sbjct: 180 AGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 239

Query: 242 VANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTI 298
           + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTI
Sbjct: 240 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 299

Query: 299 TLDVQPYNTVQDVKVKLFDKLQTP 322
           TL+V+P +T+++VK K+ D+ ++P
Sbjct: 300 TLEVEPSDTIENVKAKIQDRRESP 323



 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 121/318 (38%), Positives = 180/318 (56%), Gaps = 7/318 (2%)

Query: 81  PYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEIL 140
           P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV   +  +
Sbjct: 1   PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGM 59

Query: 141 SIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDM 200
            IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y++
Sbjct: 60  QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 119

Query: 201 KDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFY 257
           + E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L +
Sbjct: 120 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF 179

Query: 258 AGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVK 314
           AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K
Sbjct: 180 AGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 239

Query: 315 LFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSI 374
           + DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +I
Sbjct: 240 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 299

Query: 375 SLSISISEVKEMAKVKFQ 392
           +L +  S+  E  K K Q
Sbjct: 300 TLEVEPSDTIENVKAKIQ 317



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 99/243 (40%), Positives = 145/243 (59%), Gaps = 6/243 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 73  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 132

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 133 GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 190

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 191 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 250

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 251 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 310

Query: 237 DVK 239
           +VK
Sbjct: 311 NVK 313



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/280 (34%), Positives = 147/280 (52%), Gaps = 12/280 (4%)

Query: 159 SFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQI 215
           S  I +VKA +    G+      +I+ GK+LED +TL+ Y+++ E  L +       +QI
Sbjct: 2   SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 61

Query: 216 FVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKN 275
           FV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y I+ 
Sbjct: 62  FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 121

Query: 276 NYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAG 332
              L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAG
Sbjct: 122 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAG 181

Query: 333 KRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ 392
           K+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K K Q
Sbjct: 182 KQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQ 241

Query: 393 ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
                    + L+     L+D RTL+DY +     + LV 
Sbjct: 242 DKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 281


>gi|30060222|gb|AAP13102.1| polyubiquitin, partial [Schistosoma japonicum]
          Length = 340

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 131/325 (40%), Positives = 193/325 (59%), Gaps = 9/325 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDK 318
            GKTITL+V+P +T+++VK K+ DK
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDK 337



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/337 (38%), Positives = 192/337 (56%), Gaps = 8/337 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ 392
           L     +          +I+L +  S+  E  K K Q
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQ 335



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 160/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/176 (43%), Positives = 108/176 (61%), Gaps = 3/176 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGV 175
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 340


>gi|299470074|emb|CBN79251.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 380

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 140/376 (37%), Positives = 202/376 (53%), Gaps = 36/376 (9%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I  +K  I  KEGI  D   L FAG +LE GR L DY I+            
Sbjct: 15  LDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ------------ 62

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLK------ 113
              K+FVK  T +T T+ +  P  T+  +K  IQ KEGI  DQ  L++ GK L+      
Sbjct: 63  ---KIFVKTLTGKTITL-DVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 118

Query: 114 -------EDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVK 166
                  ED  T++  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I  VK
Sbjct: 119 DYNIQKLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVK 178

Query: 167 AIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEE 223
             +    G+      +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   +
Sbjct: 179 QKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 238

Query: 224 IVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV-- 281
            + L+VE    +  VK+ + +   +    Q L +AG +LE  +TL+ Y I+    L +  
Sbjct: 239 TITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 298

Query: 282 -LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHV 340
            L    QIFVKT  GKTITLDV+P +T+  VK K+ DK   P   Q ++FAGK+L +   
Sbjct: 299 RLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 358

Query: 341 LARYNIQKHSTLHMVL 356
           L+ YNIQK STLH+VL
Sbjct: 359 LSDYNIQKESTLHLVL 374



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 128/379 (33%), Positives = 190/379 (50%), Gaps = 43/379 (11%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +  P  T+  +K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-DVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+                IFVK  TG+ + L+V+ S  I  VK  +    G+      
Sbjct: 59  YNIQK---------------IFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQR 103

Query: 182 MIYEGK--------------KLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEI 224
           +I+ GK              KLED +TL+ Y+++ E  L +       +QIFV+T   + 
Sbjct: 104 LIFAGKQLEDGRTLSDYNIQKLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 163

Query: 225 VRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV--- 281
           + L+VE    +  VK+ + +   +    Q L +AG +LE  +TL+ Y I+    L +   
Sbjct: 164 ITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 223

Query: 282 LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVL 341
           L    QIFVKT  GKTITLDV+P +T+  VK K+ DK   P   Q ++FAGK+L +   L
Sbjct: 224 LRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTL 283

Query: 342 ARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAV 395
           + YNIQK STLH+VL     +          +I+L +  S+  +  K K Q         
Sbjct: 284 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQ 343

Query: 396 KELLVDQVALQDDRTLADY 414
           + L+     L+D RTL+DY
Sbjct: 344 QRLIFAGKQLEDGRTLSDY 362


>gi|256079430|ref|XP_002575990.1| ubiquitin (ribosomal protein L40) [Schistosoma mansoni]
          Length = 349

 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 124/308 (40%), Positives = 184/308 (59%), Gaps = 8/308 (2%)

Query: 55  LHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKE 114
           +H+N   M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L E
Sbjct: 38  VHENTRRMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-E 95

Query: 115 DTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVG 174
           D  T++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G
Sbjct: 96  DGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG 155

Query: 175 VSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEV 231
           +      +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE 
Sbjct: 156 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEP 215

Query: 232 LIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQI 288
              + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QI
Sbjct: 216 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 275

Query: 289 FVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQK 348
           FVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK
Sbjct: 276 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 335

Query: 349 HSTLHMVL 356
            STLH+VL
Sbjct: 336 ESTLHLVL 343



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 110/283 (38%), Positives = 164/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 59  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 118

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 119 GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 176

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 177 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 236

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 237 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 296

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 297 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 339



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 160/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 45  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 104

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 105 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 164

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 165 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 224

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 225 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 284

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 285 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 343


>gi|413926506|gb|AFW66438.1| putative ubiquitin family protein, partial [Zea mays]
 gi|413926515|gb|AFW66447.1| ubiquitin2, partial [Zea mays]
          Length = 349

 Score =  210 bits (535), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 142/360 (39%), Positives = 196/360 (54%), Gaps = 34/360 (9%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA            
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA------------ 180

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVK 239
                   K++   TL         L+      +QIFV+T   + + LEVE    + +VK
Sbjct: 181 --------KIQKESTL--------HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 224

Query: 240 EIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGK 296
             + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GK
Sbjct: 225 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 284

Query: 297 TITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           TITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 285 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 344



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 131/374 (35%), Positives = 191/374 (51%), Gaps = 39/374 (10%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVLPSPFQIFVKTWGGKTI 298
           K                     K++   TL        +++  L    QIFVKT  GKTI
Sbjct: 179 K--------------------AKIQKESTL--------HLVLRLRGGMQIFVKTLTGKTI 210

Query: 299 TLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAP 358
           TL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL  
Sbjct: 211 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 270

Query: 359 SSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLA 412
              +          +I+L +  S+  +  K K Q         + L+     L+D RTLA
Sbjct: 271 RGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 330

Query: 413 DYGMDLSEKVVLVF 426
           DY +     + LV 
Sbjct: 331 DYNIQKESTLHLVL 344


>gi|110736490|dbj|BAF00213.1| polyubiquitin 4 UBQ4 [Arabidopsis thaliana]
          Length = 351

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 142/360 (39%), Positives = 196/360 (54%), Gaps = 34/360 (9%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA            
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA------------ 180

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVK 239
                   K++   TL         L+      +QIFV+T   + + LEVE    + +VK
Sbjct: 181 --------KIQKESTL--------HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 224

Query: 240 EIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGK 296
             + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GK
Sbjct: 225 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 284

Query: 297 TITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           TITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 285 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 344



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 131/374 (35%), Positives = 191/374 (51%), Gaps = 39/374 (10%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVLPSPFQIFVKTWGGKTI 298
           K                     K++   TL        +++  L    QIFVKT  GKTI
Sbjct: 179 K--------------------AKIQKESTL--------HLVLRLRGGMQIFVKTLTGKTI 210

Query: 299 TLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAP 358
           TL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL  
Sbjct: 211 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 270

Query: 359 SSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLA 412
              +          +I+L +  S+  +  K K Q         + L+     L+D RTLA
Sbjct: 271 RGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 330

Query: 413 DYGMDLSEKVVLVF 426
           DY +     + LV 
Sbjct: 331 DYNIQKESTLHLVL 344


>gi|18044723|gb|AAH19850.1| Ubiquitin B [Mus musculus]
          Length = 305

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/301 (40%), Positives = 181/301 (60%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    H 
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQHR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/283 (38%), Positives = 164/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQHRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 104/299 (34%), Positives = 159/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +      L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQHRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|296478548|tpg|DAA20663.1| TPA: ubiquitin C [Bos taurus]
          Length = 314

 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 124/313 (39%), Positives = 184/313 (58%), Gaps = 8/313 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLI 368
           L    R  +  L+
Sbjct: 299 LRLKGRCFKFSLL 311



 Score =  177 bits (449), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 109/283 (38%), Positives = 163/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/299 (34%), Positives = 159/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 128/209 (61%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 297


>gi|195491528|ref|XP_002093599.1| GE18016 [Drosophila yakuba]
 gi|194179700|gb|EDW93311.1| GE18016 [Drosophila yakuba]
          Length = 317

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 123/306 (40%), Positives = 181/306 (59%), Gaps = 8/306 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSR 361
           L    R
Sbjct: 299 LRXXXR 304



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/283 (38%), Positives = 164/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 160/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|347968153|ref|XP_312337.4| AGAP002599-PA [Anopheles gambiae str. PEST]
 gi|333468138|gb|EAA08053.5| AGAP002599-PA [Anopheles gambiae str. PEST]
          Length = 305

 Score =  208 bits (529), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 122/305 (40%), Positives = 180/305 (59%), Gaps = 8/305 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK S LH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESPLHLV 298

Query: 356 LAPSS 360
           L P  
Sbjct: 299 LRPRG 303



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/298 (37%), Positives = 169/298 (56%), Gaps = 13/298 (4%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVLPSPFQIFVKTWG 294
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+         SP  + ++  G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE-------SPLHLVLRPRG 303



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 160/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESPLHLVL 299



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 63/140 (45%), Positives = 88/140 (62%), Gaps = 3/140 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEI 139
           +  NI+ ES +HLV  P+ +
Sbjct: 285 SDYNIQKESPLHLVLRPRGV 304


>gi|426247176|ref|XP_004017362.1| PREDICTED: polyubiquitin-C-like isoform 2 [Ovis aries]
          Length = 310

 Score =  208 bits (529), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 123/312 (39%), Positives = 183/312 (58%), Gaps = 8/312 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPL 367
           L     ++  P 
Sbjct: 299 LRLRGGVLSSPF 310



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 115/298 (38%), Positives = 169/298 (56%), Gaps = 14/298 (4%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL--------DVLPSPF 286
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L         VL SPF
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGVLSSPF 310



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 160/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|402898876|ref|XP_003919464.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-B [Papio anubis]
          Length = 305

 Score =  208 bits (529), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 122/301 (40%), Positives = 180/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRXCMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/283 (38%), Positives = 164/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  XCMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 160/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRXCMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|226484061|emb|CAX79699.1| ubiquitin C [Schistosoma japonicum]
          Length = 305

 Score =  207 bits (528), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 122/301 (40%), Positives = 180/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRVIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 109/283 (38%), Positives = 164/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q + +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRVIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/299 (34%), Positives = 160/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + ++     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRVIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|104303708|gb|ABF66639.1| ubiquitin [Pelophylax nigromaculatus]
          Length = 305

 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 122/301 (40%), Positives = 180/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/283 (38%), Positives = 164/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/299 (34%), Positives = 159/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 62/135 (45%), Positives = 85/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 285 SDYNIQKESTLHLVL 299


>gi|185135461|ref|NP_001117778.1| polyubiquitin [Oncorhynchus mykiss]
 gi|157110833|ref|XP_001651266.1| ubiquitin [Aedes aegypti]
 gi|13991678|gb|AAK51460.1|AF361365_1 polyubiquitin [Oncorhynchus mykiss]
 gi|108883867|gb|EAT48092.1| AAEL000795-PA [Aedes aegypti]
 gi|209149518|gb|ACI32978.1| Ubiquitin [Salmo salar]
 gi|209737152|gb|ACI69445.1| Ubiquitin [Salmo salar]
          Length = 305

 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 122/301 (40%), Positives = 180/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/283 (38%), Positives = 164/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  164 bits (415), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 160/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|226469794|emb|CAX76727.1| polyubiquitin [Schistosoma japonicum]
 gi|226473062|emb|CAX71217.1| polyubiquitin [Schistosoma japonicum]
 gi|226473066|emb|CAX71219.1| polyubiquitin [Schistosoma japonicum]
          Length = 304

 Score =  207 bits (527), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 122/301 (40%), Positives = 180/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/283 (38%), Positives = 164/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  164 bits (415), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 160/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|308512652|gb|ADO32981.1| polyubiquitin [Eriocheir sinensis]
 gi|325556934|gb|ADZ28743.1| ubiquitin C [Eriocheir sinensis]
          Length = 305

 Score =  207 bits (527), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 122/301 (40%), Positives = 180/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/283 (38%), Positives = 164/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  164 bits (414), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 160/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|410914740|ref|XP_003970845.1| PREDICTED: polyubiquitin-B-like isoform 1 [Takifugu rubripes]
 gi|410914742|ref|XP_003970846.1| PREDICTED: polyubiquitin-B-like isoform 2 [Takifugu rubripes]
 gi|221222312|gb|ACM09817.1| Ubiquitin [Salmo salar]
 gi|334362439|gb|AEG78418.1| Ubiquitin C variant 2 [Epinephelus coioides]
          Length = 305

 Score =  207 bits (527), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 122/301 (40%), Positives = 180/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/283 (38%), Positives = 164/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 160/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|402888113|ref|XP_003907421.1| PREDICTED: polyubiquitin-C isoform 11 [Papio anubis]
 gi|402888115|ref|XP_003907422.1| PREDICTED: polyubiquitin-C isoform 12 [Papio anubis]
 gi|426374649|ref|XP_004054182.1| PREDICTED: polyubiquitin-B-like isoform 1 [Gorilla gorilla gorilla]
 gi|426374651|ref|XP_004054183.1| PREDICTED: polyubiquitin-B-like isoform 2 [Gorilla gorilla gorilla]
 gi|426374653|ref|XP_004054184.1| PREDICTED: polyubiquitin-B-like isoform 3 [Gorilla gorilla gorilla]
 gi|426374655|ref|XP_004054185.1| PREDICTED: polyubiquitin-B-like isoform 4 [Gorilla gorilla gorilla]
 gi|426374657|ref|XP_004054186.1| PREDICTED: polyubiquitin-B-like isoform 5 [Gorilla gorilla gorilla]
 gi|426374659|ref|XP_004054187.1| PREDICTED: polyubiquitin-B-like isoform 6 [Gorilla gorilla gorilla]
 gi|426374661|ref|XP_004054188.1| PREDICTED: polyubiquitin-B-like isoform 7 [Gorilla gorilla gorilla]
 gi|426374663|ref|XP_004054189.1| PREDICTED: polyubiquitin-B-like isoform 8 [Gorilla gorilla gorilla]
 gi|426374665|ref|XP_004054190.1| PREDICTED: polyubiquitin-B-like isoform 9 [Gorilla gorilla gorilla]
 gi|15928840|gb|AAH14880.1| UBC protein [Homo sapiens]
          Length = 305

 Score =  207 bits (527), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 122/301 (40%), Positives = 180/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/283 (38%), Positives = 164/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 160/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|57163957|ref|NP_001009202.1| polyubiquitin-B [Ovis aries]
 gi|302595880|sp|P0CG55.1|UBB_SHEEP RecName: Full=Polyubiquitin-B; Contains: RecName:
           Full=Ubiquitin-related; Contains: RecName:
           Full=Ubiquitin; Flags: Precursor
 gi|2707837|gb|AAB92373.1| polyubiquitin [Ovis aries]
          Length = 305

 Score =  207 bits (527), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 122/301 (40%), Positives = 180/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRMRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/283 (38%), Positives = 164/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRMR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 160/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRMRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|6755919|ref|NP_035794.1| polyubiquitin-B [Mus musculus]
 gi|20302085|ref|NP_620250.1| polyubiquitin-B precursor [Rattus norvegicus]
 gi|147904884|ref|NP_001090433.1| uncharacterized protein LOC779345 [Xenopus laevis]
 gi|302595873|sp|P0CG62.1|UBB_CHICK RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|302595876|sp|P0CG49.1|UBB_MOUSE RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|302595879|sp|P0CG51.1|UBB_RAT RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|2118966|pir||I50437 polyubiquitin 4 - chicken
 gi|55118|emb|CAA35999.1| ubiquitin [Mus musculus]
 gi|212849|gb|AAA49128.1| ubiquitin I [Gallus gallus]
 gi|471156|dbj|BAA03983.1| polyubiquitin [Rattus norvegicus]
 gi|12840717|dbj|BAB24930.1| unnamed protein product [Mus musculus]
 gi|12845838|dbj|BAB26919.1| unnamed protein product [Mus musculus]
 gi|12846202|dbj|BAB27071.1| unnamed protein product [Mus musculus]
 gi|12850137|dbj|BAB28606.1| unnamed protein product [Mus musculus]
 gi|37805416|gb|AAH60312.1| Ubiquitin B [Rattus norvegicus]
 gi|47477820|gb|AAH70919.1| Ubiquitin B [Rattus norvegicus]
 gi|71682472|gb|AAI00342.1| Ubiquitin B [Mus musculus]
 gi|74210110|dbj|BAE21330.1| unnamed protein product [Mus musculus]
 gi|89891988|gb|ABD78846.1| ubiquitin C I [Anser anser]
 gi|116487680|gb|AAI26016.1| MGC154789 protein [Xenopus laevis]
 gi|148678404|gb|EDL10351.1| mCG23377, isoform CRA_a [Mus musculus]
 gi|197693972|gb|ACH71654.1| ubiquitin C [Columba livia]
          Length = 305

 Score =  207 bits (527), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 122/301 (40%), Positives = 180/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/283 (38%), Positives = 164/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 160/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|226477470|emb|CAX72429.1| ubiquitin C [Schistosoma japonicum]
 gi|226477472|emb|CAX72430.1| ubiquitin C [Schistosoma japonicum]
 gi|226477474|emb|CAX72431.1| ubiquitin C [Schistosoma japonicum]
 gi|226477476|emb|CAX72432.1| ubiquitin C [Schistosoma japonicum]
 gi|226477478|emb|CAX72433.1| ubiquitin C [Schistosoma japonicum]
 gi|226477480|emb|CAX72434.1| ubiquitin C [Schistosoma japonicum]
 gi|226484001|emb|CAX79669.1| ubiquitin C [Schistosoma japonicum]
 gi|226484003|emb|CAX79670.1| ubiquitin C [Schistosoma japonicum]
 gi|226484055|emb|CAX79696.1| ubiquitin C [Schistosoma japonicum]
 gi|226484057|emb|CAX79697.1| ubiquitin C [Schistosoma japonicum]
 gi|226484059|emb|CAX79698.1| ubiquitin C [Schistosoma japonicum]
 gi|226484063|emb|CAX79700.1| ubiquitin C [Schistosoma japonicum]
 gi|226484065|emb|CAX79701.1| ubiquitin C [Schistosoma japonicum]
 gi|226484067|emb|CAX79702.1| ubiquitin C [Schistosoma japonicum]
 gi|226484069|emb|CAX79703.1| ubiquitin C [Schistosoma japonicum]
 gi|226484071|emb|CAX79704.1| ubiquitin C [Schistosoma japonicum]
 gi|226484073|emb|CAX79705.1| ubiquitin C [Schistosoma japonicum]
 gi|226484075|emb|CAX79706.1| ubiquitin C [Schistosoma japonicum]
 gi|226484077|emb|CAX79707.1| ubiquitin C [Schistosoma japonicum]
 gi|226484079|emb|CAX79708.1| ubiquitin C [Schistosoma japonicum]
 gi|226484083|emb|CAX79710.1| ubiquitin C [Schistosoma japonicum]
 gi|226484311|emb|CAX79711.1| ubiquitin C [Schistosoma japonicum]
 gi|226484870|emb|CAX79712.1| ubiquitin C [Schistosoma japonicum]
          Length = 305

 Score =  207 bits (527), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 122/301 (40%), Positives = 180/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/283 (38%), Positives = 164/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 160/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|12849189|dbj|BAB28242.1| unnamed protein product [Mus musculus]
          Length = 305

 Score =  207 bits (527), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 122/301 (40%), Positives = 180/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVFRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 111/283 (39%), Positives = 165/283 (58%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLVF  +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVFRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 160/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVFRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|226484872|emb|CAX79713.1| ubiquitin C [Schistosoma japonicum]
          Length = 305

 Score =  207 bits (527), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 122/301 (40%), Positives = 180/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRMIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 109/283 (38%), Positives = 164/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q + +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRMIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/299 (34%), Positives = 160/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + ++     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRMIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|350537449|ref|NP_001232759.1| putative ubiquitin C variant 5 [Taeniopygia guttata]
 gi|350537609|ref|NP_001232766.1| putative ubiquitin C variant 14 [Taeniopygia guttata]
 gi|291404973|ref|XP_002718831.1| PREDICTED: ubiquitin B-like [Oryctolagus cuniculus]
 gi|344297907|ref|XP_003420637.1| PREDICTED: polyubiquitin-B-like [Loxodonta africana]
 gi|410979979|ref|XP_003996358.1| PREDICTED: polyubiquitin-B isoform 1 [Felis catus]
 gi|410979981|ref|XP_003996359.1| PREDICTED: polyubiquitin-B isoform 2 [Felis catus]
 gi|302595871|sp|P0CG53.1|UBB_BOVIN RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|89994036|gb|AAI14002.1| Polyubiquitin [Bos taurus]
 gi|197129050|gb|ACH45548.1| putative ubiquitin C variant 1 [Taeniopygia guttata]
 gi|197129061|gb|ACH45559.1| putative ubiquitin C variant 5 [Taeniopygia guttata]
 gi|197129064|gb|ACH45562.1| putative ubiquitin C variant 9 [Taeniopygia guttata]
 gi|197129068|gb|ACH45566.1| putative ubiquitin C variant 14 [Taeniopygia guttata]
 gi|296476687|tpg|DAA18802.1| TPA: polyubiquitin [Bos taurus]
          Length = 305

 Score =  207 bits (527), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 122/301 (40%), Positives = 180/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 110/283 (38%), Positives = 164/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 160/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|21428336|gb|AAM49828.1| GH17513p [Drosophila melanogaster]
          Length = 306

 Score =  207 bits (527), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 122/301 (40%), Positives = 180/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 110/283 (38%), Positives = 164/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 160/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|223646702|gb|ACN10109.1| Ubiquitin [Salmo salar]
 gi|223672553|gb|ACN12458.1| Ubiquitin [Salmo salar]
          Length = 305

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 122/301 (40%), Positives = 180/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/283 (38%), Positives = 164/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 160/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|195170771|ref|XP_002026185.1| GL16204 [Drosophila persimilis]
 gi|194111065|gb|EDW33108.1| GL16204 [Drosophila persimilis]
          Length = 307

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 122/301 (40%), Positives = 180/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 110/283 (38%), Positives = 164/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 160/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|389608337|dbj|BAM17780.1| ubiquitin [Papilio xuthus]
          Length = 306

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 122/301 (40%), Positives = 180/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 110/283 (38%), Positives = 164/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 160/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|602076|emb|CAA54603.1| pentameric polyubiquitin [Nicotiana tabacum]
          Length = 346

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 132/329 (40%), Positives = 188/329 (57%), Gaps = 9/329 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTP 322
            GKTITL+V+  +T+ +VK K+ DK   P
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIP 341



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 129/337 (38%), Positives = 187/337 (55%), Gaps = 8/337 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ 392
           L     +          +I+L +  S+  +  K K Q
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 335



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/299 (35%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299


>gi|195403389|ref|XP_002060272.1| GJ16068 [Drosophila virilis]
 gi|194140611|gb|EDW57085.1| GJ16068 [Drosophila virilis]
          Length = 384

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 122/301 (40%), Positives = 180/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 121/305 (39%), Positives = 176/305 (57%), Gaps = 9/305 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTI 298
            GKTI
Sbjct: 313 TGKTI 317



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 160/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|290543384|ref|NP_001166536.1| polyubiquitin-B [Cavia porcellus]
 gi|302595872|sp|P0CG54.1|UBB_CAVPO RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|1197093|dbj|BAA11842.1| ubiquitin [Cavia porcellus]
          Length = 311

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 122/301 (40%), Positives = 180/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 110/283 (38%), Positives = 164/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 160/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|226469788|emb|CAX76724.1| polyubiquitin [Schistosoma japonicum]
          Length = 304

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 122/301 (40%), Positives = 179/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K    +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKTQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 110/283 (38%), Positives = 163/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA      G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKTQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 159/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K  DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KTQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|452820028|gb|EME27076.1| ubiquitin [Galdieria sulphuraria]
          Length = 306

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/301 (40%), Positives = 181/301 (60%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 108/283 (38%), Positives = 165/283 (58%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/299 (34%), Positives = 160/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK+ +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKS 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|19483857|gb|AAH25894.1| Ubc protein [Mus musculus]
 gi|23958188|gb|AAH36303.1| Ubc protein [Mus musculus]
 gi|26372121|dbj|BAB27296.2| unnamed protein product [Mus musculus]
 gi|62825885|gb|AAH94012.1| Ubc protein [Mus musculus]
          Length = 354

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/301 (40%), Positives = 180/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 129/319 (40%), Positives = 186/319 (58%), Gaps = 9/319 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVK 312
            GKTITLDV+P  T + VK
Sbjct: 313 TGKTITLDVEPSVTTKKVK 331



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 160/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299



 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 98/244 (40%), Positives = 146/244 (59%), Gaps = 6/244 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE  +  +
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVTTK 328

Query: 237 DVKE 240
            VK+
Sbjct: 329 KVKQ 332


>gi|226473056|emb|CAX71214.1| polyubiquitin [Schistosoma japonicum]
          Length = 304

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/301 (40%), Positives = 180/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVL---PSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L ++       QIFVKT  G
Sbjct: 179 KAKIPDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRFRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 111/283 (39%), Positives = 165/283 (58%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIPDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +   F   +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRFRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 160/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIPDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRFRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|126352454|ref|NP_001075331.1| ubiquitin C [Equus caballus]
 gi|302393801|sp|Q8MKD1.3|UBB_HORSE RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
           Contains: RecName: Full=Ubiquitin-related; Flags:
           Precursor
 gi|21070215|gb|AAM34211.1|AF506969_1 ubiquitin [Equus caballus]
          Length = 305

 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 121/301 (40%), Positives = 179/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q   +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRFIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  177 bits (450), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 110/283 (38%), Positives = 163/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
              I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRFIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 159/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q  +FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRFIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|395536358|ref|XP_003770187.1| PREDICTED: polyubiquitin-B [Sarcophilus harrisii]
          Length = 305

 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 122/301 (40%), Positives = 179/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+KT IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE    L+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDXXXLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/283 (38%), Positives = 161/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED   L+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDXXXLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/299 (34%), Positives = 159/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDXXXLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 87/209 (41%), Positives = 127/209 (60%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED   +
Sbjct: 151 GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDXXXL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 297


>gi|27806505|ref|NP_776558.1| polyubiquitin-B [Bos taurus]
 gi|645|emb|CAA79146.1| polyubiquitin [Bos taurus]
          Length = 305

 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 122/301 (40%), Positives = 179/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL  Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLFDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/283 (38%), Positives = 163/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 FDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 159/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL  Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLFDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|92790152|emb|CAI83745.1| Polyubiqutin 1 [Isotricha intestinalis]
          Length = 301

 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 122/297 (41%), Positives = 177/297 (59%), Gaps = 8/297 (2%)

Query: 66  VKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIK 125
           VK  T +T T+ +  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI+
Sbjct: 1   VKTLTGKTITL-DVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNIQ 58

Query: 126 SESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYE 185
            ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+      +I+ 
Sbjct: 59  KESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 118

Query: 186 GKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIV 242
           GK+LED++TLA Y+++ E  L +       +QIFV+T   + + L+VE    + +VK  +
Sbjct: 119 GKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKI 178

Query: 243 ANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTIT 299
            +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTIT
Sbjct: 179 QDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 238

Query: 300 LDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           LDV+P +T+++VK K+ DK   P   Q ++FAGK+L +N  LA YNIQK STLH+VL
Sbjct: 239 LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVL 295



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 108/283 (38%), Positives = 162/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I+N+KA I  KEGI  D   L FAG +LE  R L DY I+  STLH + +  
Sbjct: 11  LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLR 70

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T ++  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 71  GGMQIFVKTLTGKTIT-LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTL 128

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+    
Sbjct: 129 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQ 188

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED++TLA Y+++ E  L +       +QIFV+T   + + L+VE    + 
Sbjct: 189 QRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIE 248

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 249 NVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTL 291



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/295 (36%), Positives = 160/295 (54%), Gaps = 12/295 (4%)

Query: 144 VKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDE 203
           VK  TG+ + L+V+ S  I +VKA +    G+      +I+ GK+LED++TLA Y+++ E
Sbjct: 1   VKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKE 60

Query: 204 CLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGT 260
             L +       +QIFV+T   + + L+VE    + +VK  + +   +    Q L +AG 
Sbjct: 61  STLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 120

Query: 261 KLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFD 317
           +LE  +TLA Y I+    L +   L    QIFVKT  GKTITLDV+P +T+++VK K+ D
Sbjct: 121 QLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD 180

Query: 318 KLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLS 377
           K   P   Q ++FAGK+L +N  LA YNIQK STLH+VL     +          +I+L 
Sbjct: 181 KEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLD 240

Query: 378 ISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           +  S+  E  K K Q         + L+     L+D+RTLADY +     + LV 
Sbjct: 241 VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVL 295


>gi|403330856|gb|EJY64339.1| Putative ubiquitin C variant 2 [Oxytricha trifallax]
          Length = 304

 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 120/301 (39%), Positives = 180/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-DVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITLDV+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 107/283 (37%), Positives = 163/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T ++  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/299 (34%), Positives = 160/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + L+V+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + L+VE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITLDV+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|237842873|ref|XP_002370734.1| polyubiquitin, putative [Toxoplasma gondii ME49]
 gi|211968398|gb|EEB03594.1| polyubiquitin, putative [Toxoplasma gondii ME49]
 gi|221485709|gb|EEE23990.1| polyubiquitin, putative [Toxoplasma gondii GT1]
 gi|221502923|gb|EEE28633.1| polyubiquitin, putative [Toxoplasma gondii VEG]
          Length = 307

 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 120/301 (39%), Positives = 180/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-DVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITLDV+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 107/283 (37%), Positives = 163/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T ++  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/299 (34%), Positives = 160/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + L+V+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + L+VE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITLDV+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|28436476|gb|AAO43305.1| putative polyubiquitin [Arabidopsis thaliana]
          Length = 325

 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 129/320 (40%), Positives = 181/320 (56%), Gaps = 7/320 (2%)

Query: 42  VDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSD 101
            DY I+  STLH + +    M++FVK  T +T T+ E     T+ N+K  IQ KEGI  D
Sbjct: 1   ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPD 59

Query: 102 QFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFA 161
           Q  L++ GK L ED  T+   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  
Sbjct: 60  QQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 118

Query: 162 IRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECL--LEMFPSSIQIFVRT 219
           I +VKA +    G+      +I+ GK+LED +TLA    K+  L  +      +QIFV+T
Sbjct: 119 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADNIQKESTLHLVLRLRGGMQIFVKT 178

Query: 220 PIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
              + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 179 LTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 238

Query: 280 DV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLF 336
            +   L    QIFVKT  GKTITL+V+   T+ +VK K+ DK   P   Q ++FAGK+L 
Sbjct: 239 HLVLRLRGGMQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 298

Query: 337 ENHVLARYNIQKHSTLHMVL 356
           +   LA YNIQK STLH+VL
Sbjct: 299 DGRTLADYNIQKESTLHLVL 318



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 111/283 (39%), Positives = 160/283 (56%), Gaps = 7/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 35  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 94

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 95  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 152

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 153 AD-NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 211

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 212 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSGTID 271

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 272 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 314



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 113/316 (35%), Positives = 166/316 (52%), Gaps = 13/316 (4%)

Query: 123 NIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIM 182
           NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      +
Sbjct: 4   NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 63

Query: 183 IYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVK 239
           I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +VK
Sbjct: 64  IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 123

Query: 240 EIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGK 296
             + +   +    Q L +AG +LE  +TLA   I+    L +   L    QIFVKT  GK
Sbjct: 124 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADN-IQKESTLHLVLRLRGGMQIFVKTLTGK 182

Query: 297 TITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           TITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 183 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 242

Query: 357 APSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRT 410
                +          +I+L +  S   +  K K Q         + L+     L+D RT
Sbjct: 243 RLRGGMQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 302

Query: 411 LADYGMDLSEKVVLVF 426
           LADY +     + LV 
Sbjct: 303 LADYNIQKESTLHLVL 318



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 85/208 (40%), Positives = 122/208 (58%), Gaps = 2/208 (0%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGRLVDYGIRNNSTLHFLHQNLS 60
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR +   I+  STLH + +   
Sbjct: 111 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADNIQKESTLHLVLRLRG 170

Query: 61  EMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMT 120
            M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+ 
Sbjct: 171 GMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLA 228

Query: 121 SMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADH 180
             NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+     
Sbjct: 229 DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQ 288

Query: 181 IMIYEGKKLEDSKTLAFYDMKDECLLEM 208
            +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 289 RLIFAGKQLEDGRTLADYNIQKESTLHL 316



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/154 (37%), Positives = 80/154 (51%), Gaps = 9/154 (5%)

Query: 269 ASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHL 325
           A Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   
Sbjct: 1   ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 60

Query: 326 QSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKE 385
           Q ++FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +
Sbjct: 61  QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 120

Query: 386 MAKVKFQAA------VKELLVDQVALQDDRTLAD 413
             K K Q         + L+     L+D RTLAD
Sbjct: 121 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 154


>gi|195340400|ref|XP_002036801.1| GM12582 [Drosophila sechellia]
 gi|194130917|gb|EDW52960.1| GM12582 [Drosophila sechellia]
          Length = 321

 Score =  204 bits (520), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 122/301 (40%), Positives = 179/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV      + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLLGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  194 bits (493), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 122/307 (39%), Positives = 178/307 (57%), Gaps = 9/307 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + + L
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLL 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITL 300
            GKTI+ 
Sbjct: 313 TGKTISF 319



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 160/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLLGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|42490818|gb|AAH66197.1| Ubiquitin B [Mus musculus]
          Length = 305

 Score =  204 bits (519), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 122/301 (40%), Positives = 178/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL  Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLPDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P  T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSVTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  181 bits (458), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 110/283 (38%), Positives = 164/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 PDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE  + + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSVTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL  Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLPDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S   E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSVTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|302843878|ref|XP_002953480.1| polyubiquitin [Volvox carteri f. nagariensis]
 gi|300261239|gb|EFJ45453.1| polyubiquitin [Volvox carteri f. nagariensis]
          Length = 305

 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 123/301 (40%), Positives = 177/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 111/283 (39%), Positives = 162/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 295



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/299 (36%), Positives = 159/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 241 ITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299


>gi|16552475|dbj|BAB71316.1| unnamed protein product [Homo sapiens]
          Length = 388

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 140/400 (35%), Positives = 201/400 (50%), Gaps = 76/400 (19%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+            
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE---------- 64

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
                                P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 65  ---------------------PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 102

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 103 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 162

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 163 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 222

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 223 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 282

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRL---------FEN------ 338
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L          EN      
Sbjct: 283 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDTIENVKAKIQ 342

Query: 339 ----------------------HVLARYNIQKHSTLHMVL 356
                                   L+ YNIQK STLH+VL
Sbjct: 343 DKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 382



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 123/364 (33%), Positives = 184/364 (50%), Gaps = 44/364 (12%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ E                               S  I +VKA +    G+      
Sbjct: 59  YNIQKEP------------------------------SDTIENVKAKIQDKEGIPPDQQR 88

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 89  LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 148

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 149 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 208

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 209 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 268

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 269 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 328

Query: 410 TLAD 413
           TL+D
Sbjct: 329 TLSD 332



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 97/296 (32%), Positives = 147/296 (49%), Gaps = 36/296 (12%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAG 259
           ++ E      PS                       + +VK  + +   +    Q L +AG
Sbjct: 61  IQKE------PSD---------------------TIENVKAKIQDKEGIPPDQQRLIFAG 93

Query: 260 TKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLF 316
            +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ 
Sbjct: 94  KQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQ 153

Query: 317 DKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISL 376
           DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +I+L
Sbjct: 154 DKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL 213

Query: 377 SISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
            +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 214 EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 269


>gi|92790164|emb|CAI83751.1| Polyubiqutin 1 [Entodinium caudatum]
          Length = 297

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/293 (40%), Positives = 175/293 (59%), Gaps = 8/293 (2%)

Query: 70  TNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESI 129
           T +T T+ +  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES 
Sbjct: 1   TGKTITL-DVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNIQKEST 58

Query: 130 IHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKL 189
           +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+      +I+ GK+L
Sbjct: 59  LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 118

Query: 190 EDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANII 246
           ED++TLA Y+++ E  L +       +QIFV+T   + + L+VE    + +VK  + +  
Sbjct: 119 EDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKE 178

Query: 247 DLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQ 303
            +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITLDV+
Sbjct: 179 GIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVE 238

Query: 304 PYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           P +T+++VK K+ DK   P   Q ++FAGK+L +N  LA YNIQK STLH+VL
Sbjct: 239 PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVL 291



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 108/283 (38%), Positives = 162/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I+N+KA I  KEGI  D   L FAG +LE  R L DY I+  STLH + +  
Sbjct: 7   LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLR 66

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T ++  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 67  GGMQIFVKTLTGKTIT-LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTL 124

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+    
Sbjct: 125 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQ 184

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED++TLA Y+++ E  L +       +QIFV+T   + + L+VE    + 
Sbjct: 185 QRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIE 244

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 245 NVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTL 287



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/291 (36%), Positives = 158/291 (54%), Gaps = 12/291 (4%)

Query: 148 TGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLE 207
           TG+ + L+V+ S  I +VKA +    G+      +I+ GK+LED++TLA Y+++ E  L 
Sbjct: 1   TGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLH 60

Query: 208 M---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEA 264
           +       +QIFV+T   + + L+VE    + +VK  + +   +    Q L +AG +LE 
Sbjct: 61  LVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 120

Query: 265 CKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQT 321
            +TLA Y I+    L +   L    QIFVKT  GKTITLDV+P +T+++VK K+ DK   
Sbjct: 121 NRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGI 180

Query: 322 PLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISIS 381
           P   Q ++FAGK+L +N  LA YNIQK STLH+VL     +          +I+L +  S
Sbjct: 181 PPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPS 240

Query: 382 EVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           +  E  K K Q         + L+     L+D+RTLADY +     + LV 
Sbjct: 241 DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVL 291


>gi|449662451|ref|XP_004205544.1| PREDICTED: polyubiquitin-B-like isoform 2 [Hydra magnipapillata]
          Length = 304

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 121/301 (40%), Positives = 178/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T+ N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPADTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ +  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPADTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPADTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPADTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 108/283 (38%), Positives = 162/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ ++ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPADTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPADTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ +  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPADTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPADTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 159/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ +  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPADTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPADTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPADTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  ++  +  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPADTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|28436474|gb|AAO43304.1| putative polyubiquitin [Arabidopsis thaliana]
          Length = 325

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 129/320 (40%), Positives = 181/320 (56%), Gaps = 7/320 (2%)

Query: 42  VDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSD 101
            DY I+  STLH + +    M++FVK  T +T T+ E     T+ N+K  IQ KEGI  D
Sbjct: 1   ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPD 59

Query: 102 QFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFA 161
           Q  L++ GK L ED  T+   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  
Sbjct: 60  QQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 118

Query: 162 IRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECL--LEMFPSSIQIFVRT 219
           I +VKA +    G+      +I+ GK+LED +TLA    K+  L  +      +QIFV+T
Sbjct: 119 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADNIQKESTLHLVLRLRGGMQIFVKT 178

Query: 220 PIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
              + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 179 LTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 238

Query: 280 DV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLF 336
            +   L    QIFVKT  GKTITL+V+   T+ +VK K+ DK   P   Q ++FAGK+L 
Sbjct: 239 HLVLRLRGGMQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 298

Query: 337 ENHVLARYNIQKHSTLHMVL 356
           +   LA YNIQK STLH+VL
Sbjct: 299 DGRTLADYNIQKESTLHLVL 318



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 110/283 (38%), Positives = 159/283 (56%), Gaps = 7/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 35  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 94

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 95  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 152

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +     +    
Sbjct: 153 AD-NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQ 211

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 212 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSGTID 271

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 272 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 314



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 113/316 (35%), Positives = 166/316 (52%), Gaps = 13/316 (4%)

Query: 123 NIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIM 182
           NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      +
Sbjct: 4   NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 63

Query: 183 IYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVK 239
           I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +VK
Sbjct: 64  IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 123

Query: 240 EIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGK 296
             + +   +    Q L +AG +LE  +TLA   I+    L +   L    QIFVKT  GK
Sbjct: 124 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-NIQKESTLHLVLRLRGGMQIFVKTLTGK 182

Query: 297 TITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           TITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 183 TITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 242

Query: 357 APSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRT 410
                +          +I+L +  S   +  K K Q         + L+     L+D RT
Sbjct: 243 RLRGGMQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 302

Query: 411 LADYGMDLSEKVVLVF 426
           LADY +     + LV 
Sbjct: 303 LADYNIQKESTLHLVL 318



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 84/208 (40%), Positives = 121/208 (58%), Gaps = 2/208 (0%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGRLVDYGIRNNSTLHFLHQNLS 60
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR +   I+  STLH + +   
Sbjct: 111 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADNIQKESTLHLVLRLRG 170

Query: 61  EMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMT 120
            M++FVK  T +T T +E     T+ N+K  IQ KE I  DQ  L++ GK L ED  T+ 
Sbjct: 171 GMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQL-EDGRTLA 228

Query: 121 SMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADH 180
             NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+     
Sbjct: 229 DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQ 288

Query: 181 IMIYEGKKLEDSKTLAFYDMKDECLLEM 208
            +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 289 RLIFAGKQLEDGRTLADYNIQKESTLHL 316



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/154 (37%), Positives = 80/154 (51%), Gaps = 9/154 (5%)

Query: 269 ASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHL 325
           A Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   
Sbjct: 1   ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 60

Query: 326 QSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKE 385
           Q ++FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +
Sbjct: 61  QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 120

Query: 386 MAKVKFQAA------VKELLVDQVALQDDRTLAD 413
             K K Q         + L+     L+D RTLAD
Sbjct: 121 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 154


>gi|384246185|gb|EIE19676.1| polyubiquitin [Coccomyxa subellipsoidea C-169]
          Length = 305

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 122/301 (40%), Positives = 178/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K+ IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 109/283 (38%), Positives = 163/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T++N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 295



 Score =  164 bits (415), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 107/299 (35%), Positives = 159/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK+ +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKSKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKS 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 241 ITLEVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299


>gi|197129053|gb|ACH45551.1| putative ubiquitin C variant 1 [Taeniopygia guttata]
          Length = 305

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/301 (40%), Positives = 177/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED      
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRRRAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 109/283 (38%), Positives = 163/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAG-RLVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE G R  DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRRRADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/299 (34%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +  A Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRRRADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|297810399|ref|XP_002873083.1| hypothetical protein ARALYDRAFT_487095 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297318920|gb|EFH49342.1| hypothetical protein ARALYDRAFT_487095 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 306

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 124/301 (41%), Positives = 176/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+T 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLTD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/283 (39%), Positives = 160/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLTDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 295



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/299 (35%), Positives = 157/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL  Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLTDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299


>gi|18803|emb|CAA40323.1| polyubiquitin protein [Helianthus annuus]
          Length = 334

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 129/322 (40%), Positives = 185/322 (57%), Gaps = 9/322 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKL 315
            GKTITL+V+  +T+ +VK K+
Sbjct: 313 TGKTITLEVESSDTIDNVKAKI 334



 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 123/301 (40%), Positives = 175/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/299 (35%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299


>gi|395517134|ref|XP_003762737.1| PREDICTED: polyubiquitin-B-like [Sarcophilus harrisii]
          Length = 305

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/301 (39%), Positives = 178/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +        +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQXXXIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 110/283 (38%), Positives = 163/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
              I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 XXXIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/299 (34%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P      +FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQXXXIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|393912430|gb|EJD76734.1| polyubiquitin, variant 2 [Loa loa]
          Length = 322

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/315 (38%), Positives = 185/315 (58%), Gaps = 9/315 (2%)

Query: 49  NSTLHFLHQNL-SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVY 107
            S   +L +++ + M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++
Sbjct: 4   GSNFSYLQRSIITNMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIF 62

Query: 108 DGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKA 167
            GK L ED  T++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA
Sbjct: 63  AGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 121

Query: 168 IVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEI 224
            +    G+      +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + 
Sbjct: 122 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 181

Query: 225 VRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV--- 281
           + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   
Sbjct: 182 ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 241

Query: 282 LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVL 341
           L    QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L
Sbjct: 242 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 301

Query: 342 ARYNIQKHSTLHMVL 356
           + YNIQK STLH+VL
Sbjct: 302 SDYNIQKESTLHLVL 316



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 109/283 (38%), Positives = 163/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 32  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 91

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 92  GGMQIFVKTLTGKTIT-LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 149

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 150 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 209

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 210 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 269

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 270 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 312



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 104/299 (34%), Positives = 159/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 18  MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 77

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 78  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 137

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK 
Sbjct: 138 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 197

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 198 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 257

Query: 374 ISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 258 ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 316



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 78/225 (34%), Positives = 119/225 (52%), Gaps = 9/225 (4%)

Query: 211 SSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLAS 270
           +++QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ 
Sbjct: 16  TNMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 75

Query: 271 YGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQS 327
           Y I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q 
Sbjct: 76  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 135

Query: 328 IVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMA 387
           ++FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  
Sbjct: 136 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 195

Query: 388 KVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 196 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 240



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/163 (34%), Positives = 86/163 (52%), Gaps = 6/163 (3%)

Query: 270 SYGIKNNYVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
            +G   +Y+   + +  QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++
Sbjct: 2   GFGSNFSYLQRSIITNMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 61

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 62  FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 121

Query: 390 KFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 122 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 164


>gi|357148706|ref|XP_003574865.1| PREDICTED: polyubiquitin-like [Brachypodium distachyon]
          Length = 341

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 124/304 (40%), Positives = 177/304 (58%), Gaps = 8/304 (2%)

Query: 59  LSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
           L +M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T
Sbjct: 34  LPKMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 91

Query: 119 MTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAA 178
           +   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+   
Sbjct: 92  LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD 151

Query: 179 DHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVV 235
              +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    +
Sbjct: 152 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 211

Query: 236 RDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKT 292
            +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT
Sbjct: 212 DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKT 271

Query: 293 WGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTL 352
             GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STL
Sbjct: 272 LTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 331

Query: 353 HMVL 356
           H+VL
Sbjct: 332 HLVL 335



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/283 (39%), Positives = 160/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 51  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 110

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 111 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 168

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 169 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 228

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 229 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 288

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 289 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 331



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/299 (35%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 37  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 96

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 97  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 156

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 157 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 216

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +
Sbjct: 217 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 276

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 277 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 335



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 84/235 (35%), Positives = 121/235 (51%), Gaps = 13/235 (5%)

Query: 205 LLEMFPS----SIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGT 260
           L+E  PS     +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG 
Sbjct: 25  LVEESPSPRLPKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK 84

Query: 261 KLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFD 317
           +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ D
Sbjct: 85  QLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD 144

Query: 318 KLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLS 377
           K   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +I+L 
Sbjct: 145 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 204

Query: 378 ISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           +  S+  +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 205 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 259


>gi|221122833|ref|XP_002155023.1| PREDICTED: polyubiquitin-C, partial [Hydra magnipapillata]
          Length = 530

 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 136/363 (37%), Positives = 206/363 (56%), Gaps = 10/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V++   I+++K  I V+EG+  D   LFFAG+ L+  R L DY I   S L  + +  
Sbjct: 87  LEVERINTIEDVKENIKVREGVPPDQQRLFFAGNILKDERTLSDYNILKESILQHVLRLE 146

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
            +MK+FVK  T +T T+ E  P  T++N+K  IQ KEG   DQ  L++ GK L ED  T+
Sbjct: 147 GDMKIFVKTLTGKTITL-EVEPADTIENVKAKIQDKEGFLPDQQRLIFAGKEL-EDDRTL 204

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  N++ ES +HLV   +  + IFVK  TG+   LEV+ +  I +VKA +    GV    
Sbjct: 205 SYYNVQKESTLHLVLRLRGGMQIFVKTLTGKTFTLEVEPANTIDEVKAKICDKEGVPPDQ 264

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ G  LED+ TL+  +++ + +L++       +QIFV+T   + + LEVE+   + 
Sbjct: 265 QRLIFHGILLEDA-TLSDCNVQKKSVLQLVLRLRGGMQIFVKTLTGKTITLEVELADTIE 323

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +        Q L +AG +LE  +TL+ Y ++    L +   L     IFVKT 
Sbjct: 324 NVKARIQDKKGFLPDQQRLIFAGKELEDDRTLSYYNVQKESTLHLVLRLRGSMNIFVKTL 383

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+ +VK K+ DK   PL  QS+ FAGK L     L+ YNIQK  TL 
Sbjct: 384 TGKTITLEVEPADTIDNVKAKIHDKEGVPLDQQSLFFAGKELENERTLSDYNIQKKYTLD 443

Query: 354 MVL 356
           + L
Sbjct: 444 LFL 446



 Score =  191 bits (485), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 129/369 (34%), Positives = 208/369 (56%), Gaps = 12/369 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGRLVDY-GIRNNSTLHFLHQNL 59
           ++V+ ++ I+N+KA I  KEG   D   L FAG  LE  R + Y  ++  STLH + +  
Sbjct: 163 LEVEPADTIENVKAKIQDKEGFLPDQQRLIFAGKELEDDRTLSYYNVQKESTLHLVLRLR 222

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P +T+  +K  I  KEG+  DQ  L++ G LL++  AT+
Sbjct: 223 GGMQIFVKTLTGKTFTL-EVEPANTIDEVKAKICDKEGVPPDQQRLIFHGILLED--ATL 279

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  N++ +S++ LV   +  + IFVK  TG+ + LEV+ +  I +VKA +    G     
Sbjct: 280 SDCNVQKKSVLQLVLRLRGGMQIFVKTLTGKTITLEVELADTIENVKARIQDKKGFLPDQ 339

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL++Y+++ E  L +      S+ IFV+T   + + LEVE    + 
Sbjct: 340 QRLIFAGKELEDDRTLSYYNVQKESTLHLVLRLRGSMNIFVKTLTGKTITLEVEPADTID 399

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   + L  Q LF+AG +LE  +TL+ Y I+  Y LD+   +    +I VKT 
Sbjct: 400 NVKAKIHDKEGVPLDQQSLFFAGKELENERTLSDYNIQKKYTLDLFLRIEGGMRINVKTL 459

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV-FAGKRLFENHVLARYNIQKHSTL 352
             K ITL+V P NT+ ++K K+ D +   L  Q ++ F G++L     L+ YNI+  STL
Sbjct: 460 TRKIITLEVNPANTINNIKAKISD-MDCILPDQHVLTFNGQQLDNERSLSSYNIESESTL 518

Query: 353 HMVLAPSSR 361
            + L    R
Sbjct: 519 FVELNTIHR 527



 Score =  187 bits (476), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 144/431 (33%), Positives = 233/431 (54%), Gaps = 24/431 (5%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ ++ IK  KA I  KEGI      L FA  +LE GR LVDY I+ NS L+ +   +
Sbjct: 15  LEVEPADTIK--KAKIQDKEGIPPAYQHLIFANKKLEDGRTLVDYNIQKNSCLYLVEVGI 72

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
            +  + +K  T++  + +E    +T++++K  I+V+EG+  DQ  L + G +LK D  T+
Sbjct: 73  GQ--IHIKTLTSKIIS-LEVERINTIEDVKENIKVREGVPPDQQRLFFAGNILK-DERTL 128

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI  ESI+  V   +  + IFVK  TG+ + LEV+ +  I +VKA +    G     
Sbjct: 129 SDYNILKESILQHVLRLEGDMKIFVKTLTGKTITLEVEPADTIENVKAKIQDKEGFLPDQ 188

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL++Y+++ E  L +       +QIFV+T   +   LEVE    + 
Sbjct: 189 QRLIFAGKELEDDRTLSYYNVQKESTLHLVLRLRGGMQIFVKTLTGKTFTLEVEPANTID 248

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L + G  LE   TL+   ++   VL +   L    QIFVKT 
Sbjct: 249 EVKAKICDKEGVPPDQQRLIFHGILLEDA-TLSDCNVQKKSVLQLVLRLRGGMQIFVKTL 307

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK ++ DK       Q ++FAGK L ++  L+ YN+QK STLH
Sbjct: 308 TGKTITLEVELADTIENVKARIQDKKGFLPDQQRLIFAGKELEDDRTLSYYNVQKESTLH 367

Query: 354 MVLAPSSRIIELPLIFIDPSISLSI----SISEVKEMAKVKFQAAV----KELLVDQVAL 405
           +VL     +          +I+L +    +I  VK  AK+  +  V    + L      L
Sbjct: 368 LVLRLRGSMNIFVKTLTGKTITLEVEPADTIDNVK--AKIHDKEGVPLDQQSLFFAGKEL 425

Query: 406 QDDRTLADYGM 416
           +++RTL+DY +
Sbjct: 426 ENERTLSDYNI 436



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 119/378 (31%), Positives = 186/378 (49%), Gaps = 21/378 (5%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++F +    +  T+ E  P  T++  K  IQ KEGI      L++  K L ED  T+  
Sbjct: 1   MQIFAETQCYKIMTL-EVEPADTIK--KAKIQDKEGIPPAYQHLIFANKKL-EDGRTLVD 56

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+  S ++LV     I  I +K  T +I++LEV+    I DVK  +    GV      
Sbjct: 57  YNIQKNSCLYLVEVG--IGQIHIKTLTSKIISLEVERINTIEDVKENIKVREGVPPDQQR 114

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLE---MFPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           + + G  L+D +TL+ Y++  E +L+        ++IFV+T   + + LEVE    + +V
Sbjct: 115 LFFAGNILKDERTLSDYNILKESILQHVLRLEGDMKIFVKTLTGKTITLEVEPADTIENV 174

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +        Q L +AG +LE  +TL+ Y ++    L +   L    QIFVKT  G
Sbjct: 175 KAKIQDKEGFLPDQQRLIFAGKELEDDRTLSYYNVQKESTLHLVLRLRGGMQIFVKTLTG 234

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KT TL+V+P NT+ +VK K+ DK   P   Q ++F G  L E+  L+  N+QK S L +V
Sbjct: 235 KTFTLEVEPANTIDEVKAKICDKEGVPPDQQRLIFHGI-LLEDATLSDCNVQKKSVLQLV 293

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAAVKELLVDQV-------ALQDD 408
           L     +          +I+L + +++  E  K + Q   K  L DQ         L+DD
Sbjct: 294 LRLRGGMQIFVKTLTGKTITLEVELADTIENVKARIQDK-KGFLPDQQRLIFAGKELEDD 352

Query: 409 RTLADYGMDLSEKVVLVF 426
           RTL+ Y +     + LV 
Sbjct: 353 RTLSYYNVQKESTLHLVL 370


>gi|224065086|ref|XP_002301663.1| predicted protein [Populus trichocarpa]
 gi|222843389|gb|EEE80936.1| predicted protein [Populus trichocarpa]
          Length = 305

 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 123/301 (40%), Positives = 176/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+KT IQ KEGI  DQ  L++ GK L ED +T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGSTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 109/283 (38%), Positives = 158/283 (55%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE G  L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGSTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 253 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 295



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/299 (35%), Positives = 156/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+LED  TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGSTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKT 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 87/209 (41%), Positives = 123/209 (58%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 209 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 269 QRLIFAGKQLEDGRTLADYNIQKESTLHL 297


>gi|326495764|dbj|BAJ85978.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326509329|dbj|BAJ91581.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 305

 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 123/301 (40%), Positives = 176/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 110/283 (38%), Positives = 160/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 295



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 106/299 (35%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK+ +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 124/209 (59%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 269 QRLIFAGKQLEDGRTLADYNIQKESTLHL 297


>gi|223646966|gb|ACN10241.1| Ubiquitin [Salmo salar]
 gi|223672829|gb|ACN12596.1| Ubiquitin [Salmo salar]
          Length = 305

 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 120/299 (40%), Positives = 177/299 (59%), Gaps = 8/299 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHM 354
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+  E   L+ YNIQK STLH+
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPGQQRMIFAGKQPEEGGPLSDYNIQKESTLHL 297



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/299 (37%), Positives = 167/299 (55%), Gaps = 13/299 (4%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVLPSPFQIFVKTWGG 295
           +VK  + +   +  G Q + +AG + E    L+ Y I+    L        +F +  GG
Sbjct: 253 NVKAKIQDKEGIPPGQQRMIFAGKQPEEGGPLSDYNIQKESTL-------HLFRRLRGG 304



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 95/259 (36%), Positives = 144/259 (55%), Gaps = 6/259 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ 392
           I+L +  S+  E  K K Q
Sbjct: 241 ITLEVEPSDTIENVKAKIQ 259



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 118/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223


>gi|28436472|gb|AAO43303.1| putative polyubiquitin [Arabidopsis thaliana]
          Length = 325

 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 128/320 (40%), Positives = 180/320 (56%), Gaps = 7/320 (2%)

Query: 42  VDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSD 101
            DY I+  STLH + +    M++FVK  T +T T+ E     T+ N+K  IQ KEGI  D
Sbjct: 1   ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPD 59

Query: 102 QFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFA 161
           Q  L++ GK L ED  T+   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  
Sbjct: 60  QQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 118

Query: 162 IRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECL--LEMFPSSIQIFVRT 219
           I +VKA +    G+      +I+ GK+LED +TLA    K+  L  +      +QIFV+T
Sbjct: 119 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADNIQKESTLHLVLRLRGGMQIFVKT 178

Query: 220 PIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
              + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 179 LTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 238

Query: 280 DV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLF 336
            +   L    QIFVK   GKTITL+V+   T+ +VK K+ DK   P   Q ++FAGK+L 
Sbjct: 239 HLVLRLRGGMQIFVKNLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 298

Query: 337 ENHVLARYNIQKHSTLHMVL 356
           +   LA YNIQK STLH+VL
Sbjct: 299 DGRTLADYNIQKESTLHLVL 318



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/283 (38%), Positives = 158/283 (55%), Gaps = 7/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 35  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 94

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 95  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 152

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +     +    
Sbjct: 153 AD-NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQ 211

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+    + + LEVE    + 
Sbjct: 212 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKNLTGKTITLEVESSGTID 271

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 272 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 314



 Score =  164 bits (416), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 113/316 (35%), Positives = 166/316 (52%), Gaps = 13/316 (4%)

Query: 123 NIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIM 182
           NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      +
Sbjct: 4   NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 63

Query: 183 IYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVK 239
           I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +VK
Sbjct: 64  IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 123

Query: 240 EIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGK 296
             + +   +    Q L +AG +LE  +TLA   I+    L +   L    QIFVKT  GK
Sbjct: 124 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-NIQKESTLHLVLRLRGGMQIFVKTLTGK 182

Query: 297 TITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           TITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 183 TITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 242

Query: 357 APSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRT 410
                +          +I+L +  S   +  K K Q         + L+     L+D RT
Sbjct: 243 RLRGGMQIFVKNLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 302

Query: 411 LADYGMDLSEKVVLVF 426
           LADY +     + LV 
Sbjct: 303 LADYNIQKESTLHLVL 318



 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 84/208 (40%), Positives = 121/208 (58%), Gaps = 2/208 (0%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGRLVDYGIRNNSTLHFLHQNLS 60
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR +   I+  STLH + +   
Sbjct: 111 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADNIQKESTLHLVLRLRG 170

Query: 61  EMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMT 120
            M++FVK  T +T T +E     T+ N+K  IQ KE I  DQ  L++ GK L ED  T+ 
Sbjct: 171 GMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQL-EDGRTLA 228

Query: 121 SMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADH 180
             NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+     
Sbjct: 229 DYNIQKESTLHLVLRLRGGMQIFVKNLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQ 288

Query: 181 IMIYEGKKLEDSKTLAFYDMKDECLLEM 208
            +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 289 RLIFAGKQLEDGRTLADYNIQKESTLHL 316



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/154 (37%), Positives = 80/154 (51%), Gaps = 9/154 (5%)

Query: 269 ASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHL 325
           A Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   
Sbjct: 1   ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 60

Query: 326 QSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKE 385
           Q ++FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +
Sbjct: 61  QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 120

Query: 386 MAKVKFQAA------VKELLVDQVALQDDRTLAD 413
             K K Q         + L+     L+D RTLAD
Sbjct: 121 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 154


>gi|340939025|gb|EGS19647.1| hypothetical protein CTHT_0041260 [Chaetomium thermophilum var.
           thermophilum DSM 1495]
          Length = 305

 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 120/301 (39%), Positives = 178/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/283 (38%), Positives = 163/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 104/299 (34%), Positives = 159/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|4150898|emb|CAA76577.1| polyubiquitin [Suberites domuncula]
          Length = 305

 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 120/301 (39%), Positives = 178/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/283 (38%), Positives = 163/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 104/299 (34%), Positives = 159/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|242055399|ref|XP_002456845.1| hypothetical protein SORBIDRAFT_03g043940 [Sorghum bicolor]
 gi|242064116|ref|XP_002453347.1| hypothetical protein SORBIDRAFT_04g004280 [Sorghum bicolor]
 gi|357148716|ref|XP_003574869.1| PREDICTED: polyubiquitin-like isoform 1 [Brachypodium distachyon]
 gi|357148721|ref|XP_003574870.1| PREDICTED: polyubiquitin-like isoform 2 [Brachypodium distachyon]
 gi|357148724|ref|XP_003574871.1| PREDICTED: polyubiquitin-like isoform 3 [Brachypodium distachyon]
 gi|302393780|sp|P69309.2|UBIQP_AVEFA RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|320608|pir||S28426 polyubiquitin 4 - wild oat
 gi|15989|emb|CAA49200.1| tetraubiquitin [Avena fatua]
 gi|777758|gb|AAC37466.1| polyubiquitin [Saccharum hybrid cultivar H65-7052]
 gi|25044841|gb|AAM28291.1| tetrameric ubiquitin [Ananas comosus]
 gi|241928820|gb|EES01965.1| hypothetical protein SORBIDRAFT_03g043940 [Sorghum bicolor]
 gi|241933178|gb|EES06323.1| hypothetical protein SORBIDRAFT_04g004280 [Sorghum bicolor]
 gi|332379896|gb|AEE65379.1| ubiquitin 1 [Panicum virgatum]
 gi|451854822|gb|EMD68114.1| hypothetical protein COCSADRAFT_108224 [Cochliobolus sativus
           ND90Pr]
 gi|452000986|gb|EMD93446.1| hypothetical protein COCHEDRAFT_1202381 [Cochliobolus
           heterostrophus C5]
          Length = 305

 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 123/301 (40%), Positives = 175/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/283 (39%), Positives = 160/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 295



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/299 (35%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299


>gi|19698797|gb|AAL91109.1| ubiquitin [Onchocerca volvulus]
          Length = 305

 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 120/301 (39%), Positives = 178/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/283 (38%), Positives = 163/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 104/299 (34%), Positives = 159/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|356537527|ref|XP_003537278.1| PREDICTED: polyubiquitin 3-like [Glycine max]
          Length = 306

 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 123/301 (40%), Positives = 175/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/283 (39%), Positives = 160/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 295



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/299 (35%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299


>gi|168005217|ref|XP_001755307.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162693435|gb|EDQ79787.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 305

 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 123/301 (40%), Positives = 175/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 110/283 (38%), Positives = 159/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 253 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 295



 Score =  160 bits (406), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 106/299 (35%), Positives = 157/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKT 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299


>gi|16660459|gb|AAL27563.1|AF429429_1 polyubiquitin OUB1 [Olea europaea]
          Length = 305

 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 123/301 (40%), Positives = 175/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/283 (39%), Positives = 160/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 295



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/299 (35%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299


>gi|444791|prf||1908225A ubiquitin
          Length = 305

 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 121/301 (40%), Positives = 178/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +     +      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKECIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL  Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLFDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/283 (38%), Positives = 162/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KE I  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKECIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 FDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  160 bits (406), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 159/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKECIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL  Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLFDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|302796783|ref|XP_002980153.1| hypothetical protein SELMODRAFT_271419 [Selaginella moellendorffii]
 gi|302820321|ref|XP_002991828.1| hypothetical protein SELMODRAFT_162003 [Selaginella moellendorffii]
 gi|300140366|gb|EFJ07090.1| hypothetical protein SELMODRAFT_162003 [Selaginella moellendorffii]
 gi|300152380|gb|EFJ19023.1| hypothetical protein SELMODRAFT_271419 [Selaginella moellendorffii]
          Length = 306

 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 123/301 (40%), Positives = 175/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 110/283 (38%), Positives = 159/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 253 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 295



 Score =  160 bits (406), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 106/299 (35%), Positives = 157/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKT 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299


>gi|118484244|gb|ABK94002.1| unknown [Populus trichocarpa]
          Length = 305

 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 123/301 (40%), Positives = 175/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  NNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 110/283 (38%), Positives = 159/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L D  I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADNNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 295



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/299 (35%), Positives = 157/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA  +
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADNN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299


>gi|30679302|ref|NP_849292.1| polyubiquitin 14 [Arabidopsis thaliana]
 gi|186511482|ref|NP_001118922.1| polyubiquitin 14 [Arabidopsis thaliana]
 gi|240255760|ref|NP_974516.4| polyubiquitin 10 [Arabidopsis thaliana]
 gi|224115232|ref|XP_002316978.1| predicted protein [Populus trichocarpa]
 gi|297813891|ref|XP_002874829.1| hypothetical protein ARALYDRAFT_490155 [Arabidopsis lyrata subsp.
           lyrata]
 gi|356536051|ref|XP_003536554.1| PREDICTED: polyubiquitin-like isoform 1 [Glycine max]
 gi|356536053|ref|XP_003536555.1| PREDICTED: polyubiquitin-like isoform 2 [Glycine max]
 gi|356536055|ref|XP_003536556.1| PREDICTED: polyubiquitin-like isoform 3 [Glycine max]
 gi|449458219|ref|XP_004146845.1| PREDICTED: polyubiquitin-like [Cucumis sativus]
 gi|449517130|ref|XP_004165599.1| PREDICTED: polyubiquitin-like [Cucumis sativus]
 gi|302393787|sp|P69325.2|UBIQP_SOYBN RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|302596002|sp|Q3E7T8.2|UBQ14_ARATH RecName: Full=Polyubiquitin 14; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|1076708|pir||S49332 polyubiquitin 4 - common sunflower
 gi|25294250|pir||G85036 polyubiquitin [imported] - Arabidopsis thaliana
 gi|303901|dbj|BAA03764.1| ubiquitin [Glycine max]
 gi|456714|dbj|BAA05670.1| ubiquitin [Glycine max]
 gi|556688|emb|CAA84440.1| seed tetraubiquitin [Helianthus annuus]
 gi|994785|dbj|BAA05085.1| Ubiquitin [Glycine max]
 gi|4263514|gb|AAD15340.1| putative polyubiquitin [Arabidopsis thaliana]
 gi|7269774|emb|CAB77774.1| polyubiquitin [Arabidopsis thaliana]
 gi|21593346|gb|AAM65295.1| polyubiquitin (UBQ14) [Arabidopsis thaliana]
 gi|53850087|emb|CAH59738.1| polyubiquitin [Plantago major]
 gi|222423150|dbj|BAH19554.1| AT4G02890 [Arabidopsis thaliana]
 gi|222860043|gb|EEE97590.1| predicted protein [Populus trichocarpa]
 gi|297320666|gb|EFH51088.1| hypothetical protein ARALYDRAFT_490155 [Arabidopsis lyrata subsp.
           lyrata]
 gi|332656846|gb|AEE82246.1| polyubiquitin 14 [Arabidopsis thaliana]
 gi|332656847|gb|AEE82247.1| polyubiquitin 14 [Arabidopsis thaliana]
 gi|332657103|gb|AEE82503.1| polyubiquitin 10 [Arabidopsis thaliana]
 gi|399513942|gb|AFP43341.1| polyubiquitin [Arabidopsis thaliana]
 gi|1096513|prf||2111434A tetraubiquitin
          Length = 305

 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 123/301 (40%), Positives = 175/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/283 (39%), Positives = 160/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 295



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/299 (35%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299


>gi|342298462|emb|CBY46745.1| polyubiquitin 10 protein [Lepidium appelianum]
          Length = 308

 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 123/301 (40%), Positives = 175/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 4   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 61

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 62  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 121

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 122 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 181

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 182 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 241

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 242 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 301

Query: 356 L 356
           L
Sbjct: 302 L 302



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 111/283 (39%), Positives = 160/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 18  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 77

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 78  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 135

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 136 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 195

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 196 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 255

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 256 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 298



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/299 (35%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 4   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 63

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 64  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 123

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 124 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 183

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +
Sbjct: 184 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 243

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 244 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 302


>gi|53850091|emb|CAH59740.1| polyubiquitin [Plantago major]
          Length = 305

 Score =  201 bits (510), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 123/301 (40%), Positives = 175/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 111/283 (39%), Positives = 160/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 295



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/299 (35%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299


>gi|12851404|dbj|BAB29028.1| unnamed protein product [Mus musculus]
          Length = 305

 Score =  201 bits (510), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 119/301 (39%), Positives = 179/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  I+ KEGI  DQ  L++ GK L ED +T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIRDKEGIPPDQQRLIFAGKQL-EDGSTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            N + ES +HLV   +  + IFVK  TG+ + L V+ S  I +VKA +    G+      
Sbjct: 59  YNNQKESTLHLVLRLRGGMQIFVKTLTGKTITLGVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  171 bits (432), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 109/284 (38%), Positives = 163/284 (57%), Gaps = 8/284 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE G  L DY  +  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIRDKEGIPPDQQRLIFAGKQLEDGSTLSDYNNQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
             M++FVK  T +T T+ VE  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T
Sbjct: 75  GGMQIFVKTLTGKTITLGVE--PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 131

Query: 119 MTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAA 178
           ++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+   
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD 191

Query: 179 DHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVV 235
              +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    +
Sbjct: 192 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTI 251

Query: 236 RDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
            +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 252 ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/299 (34%), Positives = 157/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED  TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIRDKEGIPPDQQRLIFAGKQLEDGSTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
            + E  L +       +QIFV+T   + + L VE    + +VK  + +   +    Q L 
Sbjct: 61  NQKESTLHLVLRLRGGMQIFVKTLTGKTITLGVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 127/209 (60%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LGVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/135 (45%), Positives = 85/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 285 SDYNIQKESTLHLVL 299


>gi|2760345|gb|AAB95250.1| ubiquitin [Arabidopsis thaliana]
          Length = 304

 Score =  201 bits (510), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 123/301 (40%), Positives = 175/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQRESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/283 (39%), Positives = 160/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQRESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 295



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/299 (35%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQRESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299


>gi|30679945|ref|NP_851029.1| polyubiquitin 3 [Arabidopsis thaliana]
 gi|30679951|ref|NP_568112.2| polyubiquitin 3 [Arabidopsis thaliana]
 gi|79326803|ref|NP_001031824.1| polyubiquitin 3 [Arabidopsis thaliana]
 gi|122237441|sp|Q1EC66.1|UBQ3_ARATH RecName: Full=Polyubiquitin 3; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|7413601|emb|CAB86091.1| polyubiquitin (ubq3) [Arabidopsis thaliana]
 gi|9757775|dbj|BAB08384.1| polyubiquitin [Arabidopsis thaliana]
 gi|27311629|gb|AAO00780.1| polyubiquitin (UBQ3) [Arabidopsis thaliana]
 gi|108385299|gb|ABF85770.1| At5g03240 [Arabidopsis thaliana]
 gi|222423646|dbj|BAH19791.1| AT5G03240 [Arabidopsis thaliana]
 gi|332003191|gb|AED90574.1| polyubiquitin 3 [Arabidopsis thaliana]
 gi|332003192|gb|AED90575.1| polyubiquitin 3 [Arabidopsis thaliana]
 gi|332003193|gb|AED90576.1| polyubiquitin 3 [Arabidopsis thaliana]
          Length = 306

 Score =  201 bits (510), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 123/301 (40%), Positives = 175/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 111/283 (39%), Positives = 160/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 295



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/299 (35%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299


>gi|323452163|gb|EGB08038.1| polyubiquitin [Aureococcus anophagefferens]
          Length = 305

 Score =  201 bits (510), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 119/301 (39%), Positives = 178/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +  P  T+ N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-DVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K+ + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITLDV+P +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/283 (37%), Positives = 160/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T ++  P  T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VK  +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK+ + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  157 bits (398), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 159/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + L+V+ S  I +VK  +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + L+VE    + +VK+ + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITLDV+P +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQ 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|187729698|gb|ACD31680.1| ubiquitin [Gossypium hirsutum]
          Length = 305

 Score =  200 bits (509), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 123/301 (40%), Positives = 175/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L  YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLPDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 109/283 (38%), Positives = 158/283 (55%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL  Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLPDYNIQKESTL 295



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 156/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTL DY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLPDYNIQKESTLHLVL 299



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/209 (41%), Positives = 123/209 (58%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL  Y+++ E  L +
Sbjct: 269 QRLIFAGKQLEDGRTLPDYNIQKESTLHL 297


>gi|28436479|gb|AAO43306.1| putative polyubiquitin [Arabidopsis thaliana]
          Length = 325

 Score =  200 bits (509), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 127/321 (39%), Positives = 182/321 (56%), Gaps = 9/321 (2%)

Query: 42  VDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSD 101
            DY I+  STLH + +    M++F K  T +T T+ E     T+ N+K  IQ KEGI  D
Sbjct: 1   ADYNIQKESTLHLVLRLRGGMQIFFKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPD 59

Query: 102 QFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFA 161
           Q  L++ GK L ED  T+   NI+ ES +HLV   +  + IF+K  TG+ + LEV+ S  
Sbjct: 60  QQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFLKTLTGKTITLEVESSDT 118

Query: 162 IRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVR 218
           I +VKA +    G+      +I+ GK+LED +TLA Y+++ E  L +       +QIFV+
Sbjct: 119 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 178

Query: 219 TPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYV 278
           T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y I+    
Sbjct: 179 TLTGKTITLEVESSNTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 238

Query: 279 LDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRL 335
           L +   L    QIFVKT  GKTITL+V+   T+ +VK K+ DK   P   Q ++F GK+L
Sbjct: 239 LHLVLRLRGGMQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIF-GKQL 297

Query: 336 FENHVLARYNIQKHSTLHMVL 356
            +   LA YNIQK STLH+VL
Sbjct: 298 EDGRTLADYNIQKESTLHLVL 318



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 113/315 (35%), Positives = 167/315 (53%), Gaps = 11/315 (3%)

Query: 123 NIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIM 182
           NI+ ES +HLV   +  + IF K  TG+ + LEV+ S  I +VKA +    G+      +
Sbjct: 4   NIQKESTLHLVLRLRGGMQIFFKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 63

Query: 183 IYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVK 239
           I+ GK+LED +TLA Y+++ E  L +       +QIF++T   + + LEVE    + +VK
Sbjct: 64  IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFLKTLTGKTITLEVESSDTIDNVK 123

Query: 240 EIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGK 296
             + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GK
Sbjct: 124 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 183

Query: 297 TITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           TITL+V+  NT+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 184 TITLEVESSNTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 243

Query: 357 APSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ-----AAVKELLVDQVALQDDRTL 411
                +          +I+L +  S   +  K K Q        ++ L+    L+D RTL
Sbjct: 244 RLRGGMQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFGKQLEDGRTL 303

Query: 412 ADYGMDLSEKVVLVF 426
           ADY +     + LV 
Sbjct: 304 ADYNIQKESTLHLVL 318



 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 108/283 (38%), Positives = 158/283 (55%), Gaps = 7/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 35  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 94

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++F+K  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 95  GGMQIFLKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 152

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +     +    
Sbjct: 153 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSNTIDNVKAKIQDKEWIPPDQ 212

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 213 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSGTID 272

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L + G +LE  +TLA Y I+    L
Sbjct: 273 NVKAKIQDKEGIPPDQQRLIF-GKQLEDGRTLADYNIQKESTL 314



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 34/56 (60%), Gaps = 2/56 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S  I N+KA I  KEGI  D   L F G +LE GR L DY I+  STLH +
Sbjct: 263 LEVESSGTIDNVKAKIQDKEGIPPDQQRLIF-GKQLEDGRTLADYNIQKESTLHLV 317



 Score = 38.5 bits (88), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 6/91 (6%)

Query: 342 ARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------V 395
           A YNIQK STLH+VL     +          +I+L +  S+  +  K K Q         
Sbjct: 1   ADYNIQKESTLHLVLRLRGGMQIFFKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 60

Query: 396 KELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           + L+     L+D RTLADY +     + LV 
Sbjct: 61  QRLIFAGKQLEDGRTLADYNIQKESTLHLVL 91


>gi|118370590|ref|XP_001018496.1| Ubiquitin family protein [Tetrahymena thermophila]
 gi|118370606|ref|XP_001018504.1| Ubiquitin family protein [Tetrahymena thermophila]
 gi|89300263|gb|EAR98251.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
 gi|89300271|gb|EAR98259.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
          Length = 304

 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 121/302 (40%), Positives = 180/302 (59%), Gaps = 10/302 (3%)

Query: 62  MKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMT 120
           M++FVK  T +T T+ VEA    T++N+K  IQ KEGI  DQ  L++ GK L ED  T++
Sbjct: 1   MQIFVKTLTGKTITLDVEA--SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLS 57

Query: 121 SMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADH 180
             NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+     
Sbjct: 58  DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQ 117

Query: 181 IMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRD 237
            +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + +
Sbjct: 118 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIEN 177

Query: 238 VKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWG 294
           VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  
Sbjct: 178 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLT 237

Query: 295 GKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHM 354
           GKTITLDV+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+
Sbjct: 238 GKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297

Query: 355 VL 356
           VL
Sbjct: 298 VL 299



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/284 (38%), Positives = 164/284 (57%), Gaps = 8/284 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
             M++FVK  T +T T+ VEA    T++N+K  IQ KEGI  DQ  L++ GK L ED  T
Sbjct: 75  GGMQIFVKTLTGKTITLDVEA--SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 131

Query: 119 MTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAA 178
           ++  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+   
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPD 191

Query: 179 DHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVV 235
              +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    +
Sbjct: 192 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTI 251

Query: 236 RDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
            +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 252 ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  160 bits (406), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 103/299 (34%), Positives = 159/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + L+V+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + L+VE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITLDV+  +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|4105408|gb|AAD02414.1| polyubiquitin [Schistosoma mansoni]
          Length = 295

 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 115/287 (40%), Positives = 170/287 (59%), Gaps = 7/287 (2%)

Query: 76  VVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFC 135
            +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV  
Sbjct: 5   TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLR 63

Query: 136 PKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTL 195
            +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL
Sbjct: 64  LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 123

Query: 196 AFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGN 252
           + Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    
Sbjct: 124 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 183

Query: 253 QDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQ 309
           Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T++
Sbjct: 184 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 243

Query: 310 DVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 244 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 290



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/283 (38%), Positives = 164/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 6   LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 65

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 66  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 123

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 124 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 183

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 184 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 243

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 244 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 286



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 100/290 (34%), Positives = 154/290 (53%), Gaps = 12/290 (4%)

Query: 149 GEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
           G+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 1   GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 60

Query: 209 ---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEAC 265
                  +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  
Sbjct: 61  VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 120

Query: 266 KTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTP 322
           +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P
Sbjct: 121 RTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 180

Query: 323 LHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISE 382
              Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+
Sbjct: 181 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 240

Query: 383 VKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
             E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 290


>gi|392569336|gb|EIW62509.1| ubiquitin [Trametes versicolor FP-101664 SS1]
          Length = 397

 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 137/367 (37%), Positives = 206/367 (56%), Gaps = 27/367 (7%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGRLV-DYGIRNNSTLHFLHQNL 59
           ++V  S+ I+N+KAMIH KEG++ +   L FAG +L++ R V DY +R  ST+  + + L
Sbjct: 16  LEVDSSDTIENVKAMIHDKEGVAPNQQRLIFAGKQLDSHRTVSDYNLRKGSTVFLMFRVL 75

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  + +T T+ E  P  T++NIK  IQ KEG   DQ  + +  + L ED  T+
Sbjct: 76  DGMQIFVKTLSGKTITL-EVKPLDTIRNIKAKIQAKEGNPPDQQRIKFAEEQL-EDDRTL 133

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+  S + LV        IFVK   GE   LEV  S  I+DVK       G   A 
Sbjct: 134 SDYNIQWNSTLQLVGR----FQIFVKTVAGETTPLEVVSSDTIKDVKEKYRDKEGAVPAQ 189

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVE------ 230
             +I+ GK+LED   L+ Y ++ +  + +    P  +QIFV++   + + +E +      
Sbjct: 190 QRLIFAGKELEDDCILSDYGIQKDSTVHLVLRLPG-MQIFVKSYTGKTITIEAKSSDTIG 248

Query: 231 -VLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVLPSPFQIF 289
            V   +RD KEI ++ I        L +A  +LE  + L+ Y I+ +  L  L   FQIF
Sbjct: 249 CVRERIRDTKEIPSDYI--------LKFADKELEDDRMLSDYNIQWDDTLH-LTRYFQIF 299

Query: 290 VKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKH 349
           VKT  GKT+TL+ + ++TV++VK K+ DK   P H Q ++FAGK+L +   L+ YNIQK 
Sbjct: 300 VKTMIGKTVTLEAESFDTVENVKAKIQDKDGNPPHKQCLIFAGKQLVDGRTLSDYNIQKE 359

Query: 350 STLHMVL 356
           STLH+V 
Sbjct: 360 STLHVVW 366



 Score =  140 bits (354), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 188/364 (51%), Gaps = 17/364 (4%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++ VK PT      +E     T++N+K MI  KEG+  +Q  L++ GK L +   T++ 
Sbjct: 1   MQISVKNPTTGKTITLEVDSSDTIENVKAMIHDKEGVAPNQQRLIFAGKQL-DSHRTVSD 59

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            N++  S + L+F   + + IFVK  +G+ + LEVK    IR++KA + +  G       
Sbjct: 60  YNLRKGSTVFLMFRVLDGMQIFVKTLSGKTITLEVKPLDTIRNIKAKIQAKEGNPPDQQR 119

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEI 241
           + +  ++LED +TL+ Y+++    L++     QIFV+T   E   LEV     ++DVKE 
Sbjct: 120 IKFAEEQLEDDRTLSDYNIQWNSTLQLV-GRFQIFVKTVAGETTPLEVVSSDTIKDVKEK 178

Query: 242 VANIIDLSLGNQDLFYAGTKLEACKTLASYGI-KNNYVLDVLPSP-FQIFVKTWGGKTIT 299
             +        Q L +AG +LE    L+ YGI K++ V  VL  P  QIFVK++ GKTIT
Sbjct: 179 YRDKEGAVPAQQRLIFAGKELEDDCILSDYGIQKDSTVHLVLRLPGMQIFVKSYTGKTIT 238

Query: 300 LDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPS 359
           ++ +  +T+  V+ ++ D  + P     + FA K L ++ +L+ YNIQ   TLH+     
Sbjct: 239 IEAKSSDTIGCVRERIRDTKEIPSDY-ILKFADKELEDDRMLSDYNIQWDDTLHL----- 292

Query: 360 SRIIELPL-IFIDPSISLSISISEVKEMAKVKFQAAVKE------LLVDQVALQDDRTLA 412
           +R  ++ +   I  +++L     +  E  K K Q           L+     L D RTL+
Sbjct: 293 TRYFQIFVKTMIGKTVTLEAESFDTVENVKAKIQDKDGNPPHKQCLIFAGKQLVDGRTLS 352

Query: 413 DYGM 416
           DY +
Sbjct: 353 DYNI 356



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/305 (32%), Positives = 156/305 (51%), Gaps = 31/305 (10%)

Query: 140 LSIFVK-AATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFY 198
           + I VK   TG+ + LEV  S  I +VKA++    GV+     +I+ GK+L+  +T++ Y
Sbjct: 1   MQISVKNPTTGKTITLEVDSSDTIENVKAMIHDKEGVAPNQQRLIFAGKQLDSHRTVSDY 60

Query: 199 DM-KDECLLEMFP--SSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDL 255
           ++ K   +  MF     +QIFV+T   + + LEV+ L  +R++K  +          Q +
Sbjct: 61  NLRKGSTVFLMFRVLDGMQIFVKTLSGKTITLEVKPLDTIRNIKAKIQAKEGNPPDQQRI 120

Query: 256 FYAGTKLEACKTLASYGIKNNYVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKL 315
            +A  +LE  +TL+ Y I+ N  L ++   FQIFVKT  G+T  L+V   +T++DVK K 
Sbjct: 121 KFAEEQLEDDRTLSDYNIQWNSTLQLV-GRFQIFVKTVAGETTPLEVVSSDTIKDVKEKY 179

Query: 316 FDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELP--LIFIDPS 373
            DK       Q ++FAGK L ++ +L+ Y IQK ST+H+VL        LP   IF+   
Sbjct: 180 RDKEGAVPAQQRLIFAGKELEDDCILSDYGIQKDSTVHLVL-------RLPGMQIFVKSY 232

Query: 374 ISLSISISEVKEMAKVKFQAAVKELLVD-------------QVALQDDRTLADYGMDLSE 420
              +I+I E K    +     V+E + D                L+DDR L+DY +   +
Sbjct: 233 TGKTITI-EAKSSDTI---GCVRERIRDTKEIPSDYILKFADKELEDDRMLSDYNIQWDD 288

Query: 421 KVVLV 425
            + L 
Sbjct: 289 TLHLT 293



 Score = 38.9 bits (89), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7   EPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLF 65
           + ++N+KA I  K+G       L FAG +L  GR L DY I+  STLH + +    M+  
Sbjct: 316 DTVENVKAKIQDKDGNPPHKQCLIFAGKQLVDGRTLSDYNIQKESTLHVVWRQFGGMQPS 375

Query: 66  V-KIPTNQTATVVEA 79
           V  +P+   A  VE+
Sbjct: 376 VGTLPSEPIALDVES 390


>gi|224069394|ref|XP_002326346.1| predicted protein [Populus trichocarpa]
 gi|222833539|gb|EEE72016.1| predicted protein [Populus trichocarpa]
          Length = 306

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/301 (40%), Positives = 174/301 (57%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVENSDTIDNVKVKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T     + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGNTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 110/283 (38%), Positives = 158/283 (55%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVENSDTIDNVKVKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG  + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGNTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 295



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 157/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV++S  I +VK  +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVENSDTIDNVKVKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  G TITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGNTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 123/209 (58%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T  T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGNTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 269 QRLIFAGKQLEDGRTLADYNIQKESTLHL 297


>gi|170584490|ref|XP_001897032.1| polyubiquitin precursor [Brugia malayi]
 gi|158595567|gb|EDP34110.1| polyubiquitin precursor, putative [Brugia malayi]
          Length = 391

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/304 (39%), Positives = 179/304 (58%), Gaps = 8/304 (2%)

Query: 59  LSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
           L  M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T
Sbjct: 84  LVNMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 141

Query: 119 MTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAA 178
           ++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+   
Sbjct: 142 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPD 201

Query: 179 DHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVV 235
              +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    +
Sbjct: 202 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTI 261

Query: 236 RDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKT 292
            +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT
Sbjct: 262 ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKT 321

Query: 293 WGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTL 352
             GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STL
Sbjct: 322 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 381

Query: 353 HMVL 356
           H+VL
Sbjct: 382 HLVL 385



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 109/283 (38%), Positives = 163/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 101 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 160

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 161 GGMQIFVKTLTGKTIT-LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 218

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 219 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 278

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 279 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 338

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 339 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 381



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/299 (34%), Positives = 159/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 87  MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 146

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 147 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 206

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK 
Sbjct: 207 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 266

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 267 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 326

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 327 ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 385



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/280 (31%), Positives = 142/280 (50%), Gaps = 14/280 (5%)

Query: 161 AIRDVKAIVGSV--VGVSAADHIMI-YEGKKLEDSKTLAFY--DMKDECLLEMFPSSIQI 215
           AI+D +  +G++  +G  A +   + +  + L D     F+  + K   L  +   ++QI
Sbjct: 30  AIKDGRPALGTIHSLGWLAGECCWLEFLSESLPDKNETVFWFLESKANLLQCVILVNMQI 89

Query: 216 FVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKN 275
           FV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y I+ 
Sbjct: 90  FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 149

Query: 276 NYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAG 332
              L +   L    QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++FAG
Sbjct: 150 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 209

Query: 333 KRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ 392
           K+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K K Q
Sbjct: 210 KQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQ 269

Query: 393 ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
                    + L+     L+D RTL+DY +     + LV 
Sbjct: 270 DKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 309


>gi|302595808|sp|P0CH27.1|RL402_TRYCR RecName: Full=Ubiquitin-60S ribosomal protein L40; Contains:
           RecName: Full=Ubiquitin; Contains: RecName: Full=60S
           ribosomal protein L40; Flags: Precursor
 gi|162337|gb|AAA30271.1| ubiquitin precursor [Trypanosoma cruzi]
          Length = 356

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/312 (39%), Positives = 179/312 (57%), Gaps = 8/312 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T   +E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKT-IALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVESSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTI L+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPL 367
           L     ++E  L
Sbjct: 299 LRLRGGVMEPTL 310



 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 110/283 (38%), Positives = 161/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T   +E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKT-IALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVESSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 295



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/299 (35%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTI L+V+  +T+++VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVESSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 241 IALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299


>gi|403413175|emb|CCL99875.1| predicted protein [Fibroporia radiculosa]
          Length = 312

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/303 (39%), Positives = 177/303 (58%), Gaps = 8/303 (2%)

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
           S M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 6   SNMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 63

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 64  SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 123

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 124 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 183

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 184 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 243

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 244 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 303

Query: 354 MVL 356
           +VL
Sbjct: 304 LVL 306



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/283 (38%), Positives = 161/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 22  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 81

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 82  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 139

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 140 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 199

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 200 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 259

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 260 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 302



 Score =  157 bits (398), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 103/299 (34%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 8   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 67

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 68  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 127

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 128 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 187

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 188 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 247

Query: 374 ISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 248 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 306



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/225 (34%), Positives = 118/225 (52%), Gaps = 9/225 (4%)

Query: 211 SSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLAS 270
           S++QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ 
Sbjct: 6   SNMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 65

Query: 271 YGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQS 327
           Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q 
Sbjct: 66  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 125

Query: 328 IVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMA 387
           ++FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  +  
Sbjct: 126 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 185

Query: 388 KVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 186 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 230


>gi|197129051|gb|ACH45549.1| putative ubiquitin C variant 1 [Taeniopygia guttata]
          Length = 305

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/301 (39%), Positives = 178/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK       Q ++FAGK+L +   L+ YNIQK  TLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGISPDQQRLIFAGKQLEDGRTLSDYNIQKELTLHLV 298

Query: 356 L 356
           +
Sbjct: 299 V 299



 Score =  181 bits (458), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 111/283 (39%), Positives = 165/283 (58%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +S   Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGISPDQQRLIFAGKQLEDGRTLSDYNIQKELTL 295



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/287 (35%), Positives = 156/287 (54%), Gaps = 12/287 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADY 414
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGISPDQQRLIFAGKQLEDGRTLSDY 287



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 118/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGIS D   L FAG +LE GR L DY I+   TLH +
Sbjct: 243 LEVEPSDTIENVKAKIQDKEGISPDQQRLIFAGKQLEDGRTLSDYNIQKELTLHLV 298


>gi|168024852|ref|XP_001764949.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683758|gb|EDQ70165.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 318

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/301 (40%), Positives = 174/301 (57%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 117/306 (38%), Positives = 168/306 (54%), Gaps = 9/306 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    +I   T 
Sbjct: 253 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMEIIEDTL 312

Query: 294 GGKTIT 299
             K IT
Sbjct: 313 ASKIIT 318



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/299 (35%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKT 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299


>gi|168028716|ref|XP_001766873.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162681852|gb|EDQ68275.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 344

 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 123/301 (40%), Positives = 174/301 (57%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y ++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYSIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYSIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/283 (38%), Positives = 158/283 (55%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              +I+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 133 ADYSIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y ++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYSIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 253 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 295



 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 157/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYSIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKT 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   LA Y+IQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYSIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299


>gi|335345806|gb|AEH41483.1| ubiquitin [Endocarpon pusillum]
          Length = 305

 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 119/301 (39%), Positives = 178/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+  + L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEFTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 107/283 (37%), Positives = 162/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKEFTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/299 (33%), Positives = 157/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK+ +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK  TLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEFTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|118370594|ref|XP_001018498.1| Ubiquitin family protein [Tetrahymena thermophila]
 gi|89300265|gb|EAR98253.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
          Length = 304

 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 120/302 (39%), Positives = 180/302 (59%), Gaps = 10/302 (3%)

Query: 62  MKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMT 120
           M++FVK  T +T T+ VEA    T++N+K  IQ KEGI  DQ  L++ GK L ED  T++
Sbjct: 1   MQIFVKTLTGKTITLDVEA--SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLS 57

Query: 121 SMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADH 180
             NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+     
Sbjct: 58  DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQ 117

Query: 181 IMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRD 237
            +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + +
Sbjct: 118 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIEN 177

Query: 238 VKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWG 294
           VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  
Sbjct: 178 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLT 237

Query: 295 GKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHM 354
           GKTITLDV+  +++++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+
Sbjct: 238 GKTITLDVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297

Query: 355 VL 356
           VL
Sbjct: 298 VL 299



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 109/284 (38%), Positives = 164/284 (57%), Gaps = 8/284 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
             M++FVK  T +T T+ VEA    T++N+K  IQ KEGI  DQ  L++ GK L ED  T
Sbjct: 75  GGMQIFVKTLTGKTITLDVEA--SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 131

Query: 119 MTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAA 178
           ++  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+   
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPD 191

Query: 179 DHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVV 235
              +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    +
Sbjct: 192 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDSI 251

Query: 236 RDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
            +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 252 ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/299 (34%), Positives = 159/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + L+V+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + L+VE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITLDV+  +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLDVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|302918054|ref|XP_003052575.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256733515|gb|EEU46862.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 305

 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 120/301 (39%), Positives = 177/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 107/283 (37%), Positives = 161/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/299 (34%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK+ +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|281205784|gb|EFA79973.1| ubiquitin [Polysphondylium pallidum PN500]
          Length = 306

 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 117/301 (38%), Positives = 178/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+KT IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + +FVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +Q+FV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLEVEGSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    Q+FVKT  G
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQVFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 106/283 (37%), Positives = 162/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T++N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQVFVKTLTGKTIT-LEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + +FVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +Q+FV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLEVEGSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 99/287 (34%), Positives = 154/287 (53%), Gaps = 12/287 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +Q+FV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQVFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    Q+FVKT  GKTITL+V+  +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLEVEGSDTIENVKT 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQVFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADY 414
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY
Sbjct: 241 ITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 287


>gi|124377854|tpd|FAA00317.1| TPA: polyubiquitin [Aspergillus nidulans FGSC A4]
          Length = 304

 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 120/301 (39%), Positives = 176/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/283 (38%), Positives = 161/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 157/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 83/135 (61%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 285 SDYNIQKESTLHLVL 299


>gi|259487366|tpe|CBF85986.1| TPA: Polyubiquitin Fragment [Source:UniProtKB/TrEMBL;Acc:A2RVC1]
           [Aspergillus nidulans FGSC A4]
          Length = 305

 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 120/301 (39%), Positives = 176/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 108/283 (38%), Positives = 161/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 157/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 83/135 (61%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 285 SDYNIQKESTLHLVL 299


>gi|297833748|ref|XP_002884756.1| hypothetical protein ARALYDRAFT_478302 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297330596|gb|EFH61015.1| hypothetical protein ARALYDRAFT_478302 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 598

 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 141/371 (38%), Positives = 204/371 (54%), Gaps = 22/371 (5%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D+  L FAG  LE GR L  Y I+  STL+ + +  
Sbjct: 233 LEVESSDTIDNVKAKIQEKEGIPMDLHRLIFAGKPLEGGRTLAHYNIQKGSTLYLVTRFR 292

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +   + E   + T++N+K MIQ KEGIQ D   L++ GK LK D  T 
Sbjct: 293 CGMQIFVKTLTGKRINL-EVESWDTIENVKAMIQDKEGIQPDLQRLIFLGKELK-DRCTP 350

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
               I+ ES +HLV      + IFVK   G+I+ LEV  S  I  VKA +   VG     
Sbjct: 351 ADYGIQKESTLHLVLG----MQIFVKLFGGKIITLEVVSSDTIESVKAKIQDKVGSPPDQ 406

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEMF---PSSIQIFVRT-------PIEEIVRLEV 229
             +I+ G +LED +TLA YD+++E  L +F   P  +QIFV+T       P  + + LEV
Sbjct: 407 QRLIFLGHELEDGRTLADYDIRNESTLRLFFHIPHGMQIFVKTYAFSGETPTCKTITLEV 466

Query: 230 EVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVL---PSPF 286
           E    + +VK  + + + + L  Q L + G  L   +TL  Y I+    +  L       
Sbjct: 467 ESSDTIDNVKVKIQHKVGIPLDRQSLIFGGRVLVGTRTLLDYNIQKESTIHQLFLQRGGM 526

Query: 287 QIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQ-TPLHLQSIVFAGKRLFENHVLARYN 345
           QIF+KT  GKTI L+V+  +T+ +VK K+  K   TP+  Q ++F GK+L +   L  Y 
Sbjct: 527 QIFIKTLTGKTIMLEVENSDTIANVKEKIQVKEGITPVQ-QRLIFFGKQLEDGVTLGDYC 585

Query: 346 IQKHSTLHMVL 356
           I K+STL++VL
Sbjct: 586 IHKNSTLYLVL 596



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 151/449 (33%), Positives = 230/449 (51%), Gaps = 25/449 (5%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRL--EAGR-LVDYGIRNNSTLHFLHQ 57
           ++V+ S+ I ++KA I  +EG+  D   L F G+ L  + GR L DYGI+N S LH   +
Sbjct: 150 LEVESSDTIDSVKAKIQDREGLRPDHQRLSFHGEELFTKDGRTLADYGIQNKSALHLGTR 209

Query: 58  NLSEMKLFVK-IPTNQTAT---VVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLK 113
               M +FVK +P N       ++E     T+ N+K  IQ KEGI  D   L++ GK L 
Sbjct: 210 LRGNMYIFVKNLPYNTFTGENFILEVESSDTIDNVKAKIQEKEGIPMDLHRLIFAGKPL- 268

Query: 114 EDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVV 173
           E   T+   NI+  S ++LV   +  + IFVK  TG+ +NLEV+    I +VKA++    
Sbjct: 269 EGGRTLAHYNIQKGSTLYLVTRFRCGMQIFVKTLTGKRINLEVESWDTIENVKAMIQDKE 328

Query: 174 GVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEMFPSSIQIFVRTPIEEIVRLEVEVLI 233
           G+      +I+ GK+L+D  T A Y ++ E  L +    +QIFV+    +I+ LEV    
Sbjct: 329 GIQPDLQRLIFLGKELKDRCTPADYGIQKESTLHLVLG-MQIFVKLFGGKIITLEVVSSD 387

Query: 234 VVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFV 290
            +  VK  + + +      Q L + G +LE  +TLA Y I+N   L +   +P   QIFV
Sbjct: 388 TIESVKAKIQDKVGSPPDQQRLIFLGHELEDGRTLADYDIRNESTLRLFFHIPHGMQIFV 447

Query: 291 KTWG-------GKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLAR 343
           KT+         KTITL+V+  +T+ +VKVK+  K+  PL  QS++F G+ L     L  
Sbjct: 448 KTYAFSGETPTCKTITLEVESSDTIDNVKVKIQHKVGIPLDRQSLIFGGRVLVGTRTLLD 507

Query: 344 YNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSI----SISEVKEMAKVK--FQAAVKE 397
           YNIQK ST+H +      +          +I L +    +I+ VKE  +VK       + 
Sbjct: 508 YNIQKESTIHQLFLQRGGMQIFIKTLTGKTIMLEVENSDTIANVKEKIQVKEGITPVQQR 567

Query: 398 LLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           L+     L+D  TL DY +  +  + LV 
Sbjct: 568 LIFFGKQLEDGVTLGDYCIHKNSTLYLVL 596



 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 149/445 (33%), Positives = 226/445 (50%), Gaps = 36/445 (8%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE G  L DY I+  STLH + +  
Sbjct: 69  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGHTLADYSIQKESTLHLVLRLR 128

Query: 60  SEMKLFV-----KIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDG-KLLK 113
             M++FV     K  T +T T +E     T+ ++K  IQ +EG++ D   L + G +L  
Sbjct: 129 GGMQIFVITFPGKNFTGETLT-LEVESSDTIDSVKAKIQDREGLRPDHQRLSFHGEELFT 187

Query: 114 EDTATMTSMNIKSESIIHLVFCPKEILSIFVK-----AATGEIVNLEVKHSFAIRDVKAI 168
           +D  T+    I+++S +HL    +  + IFVK       TGE   LEV+ S  I +VKA 
Sbjct: 188 KDGRTLADYGIQNKSALHLGTRLRGNMYIFVKNLPYNTFTGENFILEVESSDTIDNVKAK 247

Query: 169 VGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIV 225
           +    G+    H +I+ GK LE  +TLA Y+++    L +   F   +QIFV+T   + +
Sbjct: 248 IQEKEGIPMDLHRLIFAGKPLEGGRTLAHYNIQKGSTLYLVTRFRCGMQIFVKTLTGKRI 307

Query: 226 RLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVLPSP 285
            LEVE    + +VK ++ +   +    Q L + G +L+   T A YGI+    L ++   
Sbjct: 308 NLEVESWDTIENVKAMIQDKEGIQPDLQRLIFLGKELKDRCTPADYGIQKESTLHLVLG- 366

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVK +GGK ITL+V   +T++ VK K+ DK+ +P   Q ++F G  L +   LA Y+
Sbjct: 367 MQIFVKLFGGKIITLEVVSSDTIESVKAKIQDKVGSPPDQQRLIFLGHELEDGRTLADYD 426

Query: 346 IQKHSTLHMVLA-PSSRII---------ELPLIFIDPSISLSISISEVKEMAKVKFQAAV 395
           I+  STL +    P    I         E P      +I+L +  S+  +  KVK Q  V
Sbjct: 427 IRNESTLRLFFHIPHGMQIFVKTYAFSGETPTC---KTITLEVESSDTIDNVKVKIQHKV 483

Query: 396 ------KELLVDQVALQDDRTLADY 414
                 + L+     L   RTL DY
Sbjct: 484 GIPLDRQSLIFGGRVLVGTRTLLDY 508



 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 142/416 (34%), Positives = 209/416 (50%), Gaps = 31/416 (7%)

Query: 36  LEAG-RLVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQV 94
           LE G  L DY I+  STLH + +    M++FVK  T +T T+ E     T+ N+K  IQ 
Sbjct: 28  LEDGLTLADYSIQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQD 86

Query: 95  KEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFV-----KAATG 149
           KEGI  DQ  L++ GK L ED  T+   +I+ ES +HLV   +  + IFV     K  TG
Sbjct: 87  KEGIPPDQQRLIFAGKQL-EDGHTLADYSIQKESTLHLVLRLRGGMQIFVITFPGKNFTG 145

Query: 150 EIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKL--EDSKTLAFYDMKDECLLE 207
           E + LEV+ S  I  VKA +    G+      + + G++L  +D +TLA Y ++++  L 
Sbjct: 146 ETLTLEVESSDTIDSVKAKIQDREGLRPDHQRLSFHGEELFTKDGRTLADYGIQNKSALH 205

Query: 208 M---FPSSIQIFVR-----TPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAG 259
           +      ++ IFV+     T   E   LEVE    + +VK  +     + +    L +AG
Sbjct: 206 LGTRLRGNMYIFVKNLPYNTFTGENFILEVESSDTIDNVKAKIQEKEGIPMDLHRLIFAG 265

Query: 260 TKLEACKTLASYGIKNN---YVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLF 316
             LE  +TLA Y I+     Y++       QIFVKT  GK I L+V+ ++T+++VK  + 
Sbjct: 266 KPLEGGRTLAHYNIQKGSTLYLVTRFRCGMQIFVKTLTGKRINLEVESWDTIENVKAMIQ 325

Query: 317 DKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISL 376
           DK      LQ ++F GK L +    A Y IQK STLH+VL     +     +F    I+L
Sbjct: 326 DKEGIQPDLQRLIFLGKELKDRCTPADYGIQKESTLHLVLGMQIFV----KLFGGKIITL 381

Query: 377 SISISEVKEMAKVKFQAAV------KELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
            +  S+  E  K K Q  V      + L+     L+D RTLADY +     + L F
Sbjct: 382 EVVSSDTIESVKAKIQDKVGSPPDQQRLIFLGHELEDGRTLADYDIRNESTLRLFF 437



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/222 (34%), Positives = 107/222 (48%), Gaps = 42/222 (18%)

Query: 212 SIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASY 271
           +IQI+ +T  E+ + L+VE    + D                        LE   TLA Y
Sbjct: 2   TIQIYAKTLTEKTITLDVETSDSIHD------------------------LEDGLTLADY 37

Query: 272 GIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSI 328
            I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q +
Sbjct: 38  SIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 97

Query: 329 VFAGKRLFENHVLARYNIQKHSTLHMVLAPSSR----IIELPLI-FIDPSISLSISISEV 383
           +FAGK+L + H LA Y+IQK STLH+VL         +I  P   F   +++L +  S+ 
Sbjct: 98  IFAGKQLEDGHTLADYSIQKESTLHLVLRLRGGMQIFVITFPGKNFTGETLTLEVESSDT 157

Query: 384 KEMAKVKFQAAVKELLVDQVAL---------QDDRTLADYGM 416
            +  K K Q   + L  D   L         +D RTLADYG+
Sbjct: 158 IDSVKAKIQDR-EGLRPDHQRLSFHGEELFTKDGRTLADYGI 198


>gi|67523087|ref|XP_659604.1| hypothetical protein AN2000.2 [Aspergillus nidulans FGSC A4]
 gi|40744745|gb|EAA63901.1| hypothetical protein AN2000.2 [Aspergillus nidulans FGSC A4]
          Length = 323

 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 120/301 (39%), Positives = 176/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 19  MQIFVKTLTGKTITL-EVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 76

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 77  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQR 136

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 137 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 196

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 197 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 256

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 257 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 316

Query: 356 L 356
           L
Sbjct: 317 L 317



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 108/283 (38%), Positives = 161/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 33  LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 92

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 93  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 150

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 151 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 210

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 211 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 270

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 271 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 313



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/301 (34%), Positives = 159/301 (52%), Gaps = 12/301 (3%)

Query: 138 EILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAF 197
           +I+ IFVK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+LED +TL+ 
Sbjct: 17  DIMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 76

Query: 198 YDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQD 254
           Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q 
Sbjct: 77  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQR 136

Query: 255 LFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDV 311
           L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +V
Sbjct: 137 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 196

Query: 312 KVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFID 371
           K K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +         
Sbjct: 197 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 256

Query: 372 PSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLV 425
            +I+L +  S+  +  K K Q         + L+     L+D RTL+DY +     + LV
Sbjct: 257 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 316

Query: 426 F 426
            
Sbjct: 317 L 317



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 83/135 (61%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 185 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 244

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 245 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 302

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 303 SDYNIQKESTLHLVL 317


>gi|302680697|ref|XP_003030030.1| polyubiquitin [Schizophyllum commune H4-8]
 gi|2739333|gb|AAB94630.1| polyubiquitin [Schizophyllum commune]
 gi|300103721|gb|EFI95127.1| polyubiquitin [Schizophyllum commune H4-8]
 gi|328770661|gb|EGF80702.1| polyubiquitin [Batrachochytrium dendrobatidis JAM81]
 gi|409044635|gb|EKM54116.1| hypothetical protein PHACADRAFT_257732 [Phanerochaete carnosa
           HHB-10118-sp]
          Length = 305

 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 120/301 (39%), Positives = 176/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/283 (38%), Positives = 161/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 103/299 (34%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|290987764|ref|XP_002676592.1| polyubiquitin [Naegleria gruberi]
 gi|290995460|ref|XP_002680313.1| polyubiquitin [Naegleria gruberi]
 gi|284090195|gb|EFC43848.1| polyubiquitin [Naegleria gruberi]
 gi|284093933|gb|EFC47569.1| polyubiquitin [Naegleria gruberi]
          Length = 305

 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 118/301 (39%), Positives = 179/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ +  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 105/283 (37%), Positives = 164/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ ++ I+N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T++N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ +  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/299 (33%), Positives = 159/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ +  I +VK+ +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENVKS 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  ++  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|169844322|ref|XP_001828882.1| ubiquitin C [Coprinopsis cinerea okayama7#130]
 gi|170084089|ref|XP_001873268.1| ubiquitin [Laccaria bicolor S238N-H82]
 gi|302695715|ref|XP_003037536.1| hypothetical protein SCHCODRAFT_64979 [Schizophyllum commune H4-8]
 gi|116509994|gb|EAU92889.1| ubiquitin C [Coprinopsis cinerea okayama7#130]
 gi|164650820|gb|EDR15060.1| ubiquitin [Laccaria bicolor S238N-H82]
 gi|300111233|gb|EFJ02634.1| hypothetical protein SCHCODRAFT_64979 [Schizophyllum commune H4-8]
 gi|336385372|gb|EGO26519.1| hypothetical protein SERLADRAFT_385284 [Serpula lacrymans var.
           lacrymans S7.9]
 gi|390604125|gb|EIN13516.1| ubiquitin [Punctularia strigosozonata HHB-11173 SS5]
 gi|409083376|gb|EKM83733.1| hypothetical protein AGABI1DRAFT_81473 [Agaricus bisporus var.
           burnettii JB137-S8]
 gi|426201575|gb|EKV51498.1| ubiquitin [Agaricus bisporus var. bisporus H97]
 gi|443894847|dbj|GAC72194.1| ubiquitin and ubiquitin-like proteins [Pseudozyma antarctica T-34]
          Length = 305

 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 120/301 (39%), Positives = 176/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/283 (38%), Positives = 161/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 103/299 (34%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|154312178|ref|XP_001555417.1| polyubiquitin [Botryotinia fuckeliana B05.10]
 gi|171682222|ref|XP_001906054.1| hypothetical protein [Podospora anserina S mat+]
 gi|3091264|gb|AAC15225.1| polyubiquitin [Botryotinia fuckeliana]
 gi|170941070|emb|CAP66720.1| unnamed protein product [Podospora anserina S mat+]
 gi|345566606|gb|EGX49548.1| hypothetical protein AOL_s00078g37 [Arthrobotrys oligospora ATCC
           24927]
 gi|347836850|emb|CCD51422.1| similar to polyubiquitin protein [Botryotinia fuckeliana]
 gi|393248123|gb|EJD55630.1| ubiquitin [Auricularia delicata TFB-10046 SS5]
 gi|409051494|gb|EKM60970.1| hypothetical protein PHACADRAFT_247222 [Phanerochaete carnosa
           HHB-10118-sp]
          Length = 305

 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 120/301 (39%), Positives = 176/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/283 (38%), Positives = 161/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 103/299 (34%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|119192382|ref|XP_001246797.1| polyubiquitin [Coccidioides immitis RS]
 gi|145258352|ref|XP_001402015.1| ubiquitin [Aspergillus niger CBS 513.88]
 gi|258573789|ref|XP_002541076.1| ubiquitin [Uncinocarpus reesii 1704]
 gi|296808323|ref|XP_002844500.1| polyubiquitin [Arthroderma otae CBS 113480]
 gi|303312875|ref|XP_003066449.1| polyubiquitin, putative [Coccidioides posadasii C735 delta SOWgp]
 gi|134074621|emb|CAK44654.1| unnamed protein product [Aspergillus niger]
 gi|237901342|gb|EEP75743.1| ubiquitin [Uncinocarpus reesii 1704]
 gi|238843983|gb|EEQ33645.1| polyubiquitin [Arthroderma otae CBS 113480]
 gi|240106111|gb|EER24304.1| polyubiquitin, putative [Coccidioides posadasii C735 delta SOWgp]
 gi|350632449|gb|EHA20817.1| hypothetical protein ASPNIDRAFT_214265 [Aspergillus niger ATCC
           1015]
 gi|392863964|gb|EJB10724.1| polyubiquitin [Coccidioides immitis RS]
          Length = 305

 Score =  198 bits (503), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 120/301 (39%), Positives = 176/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 108/283 (38%), Positives = 160/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 157/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKT 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|82539669|ref|XP_724205.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
 gi|23478774|gb|EAA15770.1| Unknown protein [Plasmodium yoelii yoelii]
          Length = 329

 Score =  198 bits (503), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 120/319 (37%), Positives = 181/319 (56%), Gaps = 22/319 (6%)

Query: 59  LSEMKLFVKIPTNQTAT---------------VVEAMPYHTVQNIKTMIQVKEGIQSDQF 103
           L +M++FVK  T + A                 ++  P  T++N+K  IQ KEGI  DQ 
Sbjct: 7   LPKMQIFVKTLTGKLANNILLIMYIFLIRKTITLDVEPSDTIENVKAKIQDKEGIPPDQQ 66

Query: 104 TLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIR 163
            L++ GK L ED  T++  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I 
Sbjct: 67  RLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIE 125

Query: 164 DVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTP 220
           +VKA +    G+      +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T 
Sbjct: 126 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 185

Query: 221 IEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLD 280
             + + L+VE    + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L 
Sbjct: 186 TGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 245

Query: 281 V---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFE 337
           +   L    QIFVKT  GKTITLDV+P +T+++VK K+ DK   P   Q ++FAGK+L +
Sbjct: 246 LVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 305

Query: 338 NHVLARYNIQKHSTLHMVL 356
              L+ YNIQK STLH+VL
Sbjct: 306 GRTLSDYNIQKESTLHLVL 324



 Score =  174 bits (441), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 107/283 (37%), Positives = 163/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 40  LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 99

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T ++  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 100 GGMQIFVKTLTGKTIT-LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 157

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+    
Sbjct: 158 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQ 217

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + 
Sbjct: 218 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIE 277

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 278 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 320



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 108/325 (33%), Positives = 166/325 (51%), Gaps = 30/325 (9%)

Query: 130 IHLVFCPKEILSIFVKAATGEIVN----------------LEVKHSFAIRDVKAIVGSVV 173
           I+ +  PK  + IFVK  TG++ N                L+V+ S  I +VKA +    
Sbjct: 2   IYTIPLPK--MQIFVKTLTGKLANNILLIMYIFLIRKTITLDVEPSDTIENVKAKIQDKE 59

Query: 174 GVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVE 230
           G+      +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE
Sbjct: 60  GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVE 119

Query: 231 VLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQ 287
               + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    Q
Sbjct: 120 PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 179

Query: 288 IFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQ 347
           IFVKT  GKTITLDV+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQ
Sbjct: 180 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 239

Query: 348 KHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVD 401
           K STLH+VL     +          +I+L +  S+  E  K K Q         + L+  
Sbjct: 240 KESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 299

Query: 402 QVALQDDRTLADYGMDLSEKVVLVF 426
              L+D RTL+DY +     + LV 
Sbjct: 300 GKQLEDGRTLSDYNIQKESTLHLVL 324


>gi|393245214|gb|EJD52725.1| ubiquitin [Auricularia delicata TFB-10046 SS5]
          Length = 305

 Score =  198 bits (503), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 120/301 (39%), Positives = 176/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/283 (38%), Positives = 161/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  157 bits (398), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 103/299 (34%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|301096555|ref|XP_002897374.1| ubiquitin family protein, putative [Phytophthora infestans T30-4]
 gi|262107065|gb|EEY65117.1| ubiquitin family protein, putative [Phytophthora infestans T30-4]
 gi|348684366|gb|EGZ24181.1| hypothetical protein PHYSODRAFT_353926 [Phytophthora sojae]
          Length = 305

 Score =  198 bits (503), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 117/301 (38%), Positives = 179/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +  P  ++ N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-DVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S +I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K+ + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITLDV+P +++ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 104/283 (36%), Positives = 161/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T ++  P  ++ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S +I +VK  +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK+ + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 101/299 (33%), Positives = 160/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + L+V+ S +I +VK  +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + L+VE    + +VK+ + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITLDV+P +++ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQ 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|392597236|gb|EIW86558.1| polyubiquitin [Coniophora puteana RWD-64-598 SS2]
          Length = 305

 Score =  198 bits (503), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 120/301 (39%), Positives = 176/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/283 (38%), Positives = 161/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 103/299 (34%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|115492305|ref|XP_001210780.1| ubiquitin [Aspergillus terreus NIH2624]
 gi|149242950|ref|XP_001526489.1| hypothetical protein LELG_03047 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|169771599|ref|XP_001820269.1| ubiquitin [Aspergillus oryzae RIB40]
 gi|212542037|ref|XP_002151173.1| polyubiquitin UbiD/Ubi4, putative [Talaromyces marneffei ATCC
           18224]
 gi|238485820|ref|XP_002374148.1| polyubiquitin UbiD/Ubi4, putative [Aspergillus flavus NRRL3357]
 gi|242769894|ref|XP_002341866.1| polyubiquitin UbiD/Ubi4, putative [Talaromyces stipitatus ATCC
           10500]
 gi|448097159|ref|XP_004198602.1| Piso0_001982 [Millerozyma farinosa CBS 7064]
 gi|448111178|ref|XP_004201781.1| Piso0_001982 [Millerozyma farinosa CBS 7064]
 gi|83768128|dbj|BAE58267.1| unnamed protein product [Aspergillus oryzae RIB40]
 gi|114197640|gb|EAU39340.1| ubiquitin [Aspergillus terreus NIH2624]
 gi|146450612|gb|EDK44868.1| hypothetical protein LELG_03047 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|210066080|gb|EEA20173.1| polyubiquitin UbiD/Ubi4, putative [Talaromyces marneffei ATCC
           18224]
 gi|218725062|gb|EED24479.1| polyubiquitin UbiD/Ubi4, putative [Talaromyces stipitatus ATCC
           10500]
 gi|220699027|gb|EED55366.1| polyubiquitin UbiD/Ubi4, putative [Aspergillus flavus NRRL3357]
 gi|359380024|emb|CCE82265.1| Piso0_001982 [Millerozyma farinosa CBS 7064]
 gi|359464770|emb|CCE88475.1| Piso0_001982 [Millerozyma farinosa CBS 7064]
 gi|391871753|gb|EIT80910.1| ubiquitin and ubiquitin-like protein [Aspergillus oryzae 3.042]
          Length = 305

 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 119/301 (39%), Positives = 177/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/283 (37%), Positives = 162/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK+ +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|116202449|ref|XP_001227036.1| polyubiquitin [Chaetomium globosum CBS 148.51]
 gi|126139705|ref|XP_001386375.1| hypothetical protein PICST_73878 [Scheffersomyces stipitis CBS
           6054]
 gi|255948832|ref|XP_002565183.1| Pc22g12390 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|367040177|ref|XP_003650469.1| hypothetical protein THITE_2072392 [Thielavia terrestris NRRL 8126]
 gi|389633097|ref|XP_003714201.1| polyubiquitin [Magnaporthe oryzae 70-15]
 gi|2894304|emb|CAA11267.1| polyubiquitin [Nicotiana tabacum]
 gi|3334645|emb|CAA07773.1| polyubiquitin [Gibberella pulicaris]
 gi|88177627|gb|EAQ85095.1| polyubiquitin [Chaetomium globosum CBS 148.51]
 gi|88766393|gb|ABD49716.1| polyubiquitin [Metarhizium anisopliae]
 gi|126093657|gb|ABN68346.1| predicted protein [Scheffersomyces stipitis CBS 6054]
 gi|211592200|emb|CAP98527.1| Pc22g12390 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|310800960|gb|EFQ35853.1| ubiquitin family protein [Glomerella graminicola M1.001]
 gi|322711004|gb|EFZ02578.1| ubiquitin [Metarhizium anisopliae ARSEF 23]
 gi|340516961|gb|EGR47207.1| polyubiquitin [Trichoderma reesei QM6a]
 gi|346997730|gb|AEO64133.1| hypothetical protein THITE_2072392 [Thielavia terrestris NRRL 8126]
 gi|351646534|gb|EHA54394.1| polyubiquitin [Magnaporthe oryzae 70-15]
 gi|358386330|gb|EHK23926.1| hypothetical protein TRIVIDRAFT_215920 [Trichoderma virens Gv29-8]
 gi|361129858|gb|EHL01740.1| putative Polyubiquitin [Glarea lozoyensis 74030]
 gi|378733143|gb|EHY59602.1| polyubiquitin [Exophiala dermatitidis NIH/UT8656]
 gi|402085157|gb|EJT80055.1| polyubiquitin [Gaeumannomyces graminis var. tritici R3-111a-1]
 gi|406701275|gb|EKD04425.1| hypothetical protein A1Q2_01309 [Trichosporon asahii var. asahii
           CBS 8904]
 gi|406867327|gb|EKD20365.1| ubiquitin [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
 gi|407920052|gb|EKG13270.1| Ubiquitin [Macrophomina phaseolina MS6]
 gi|453085016|gb|EMF13059.1| ubiquitin [Mycosphaerella populorum SO2202]
          Length = 305

 Score =  197 bits (502), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 119/301 (39%), Positives = 177/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/283 (37%), Positives = 162/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK+ +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|55783587|gb|AAV65292.1| polyubiquitin [Aspergillus fumigatus]
          Length = 304

 Score =  197 bits (502), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 119/301 (39%), Positives = 177/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/283 (37%), Positives = 162/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK+ +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|255714909|ref|XP_002553736.1| KLTH0E05852p [Lachancea thermotolerans]
 gi|238935118|emb|CAR23299.1| KLTH0E05852p [Lachancea thermotolerans CBS 6340]
          Length = 409

 Score =  197 bits (501), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 123/319 (38%), Positives = 184/319 (57%), Gaps = 12/319 (3%)

Query: 48  NNSTLHFLHQNLSE----MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQF 103
           NN T   L +  ++    M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ 
Sbjct: 87  NNDTRKRLTERKTQARDTMQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQ 145

Query: 104 TLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIR 163
            L++ GK L ED  T++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I 
Sbjct: 146 RLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 204

Query: 164 DVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTP 220
           +VK+ +    G+      +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T 
Sbjct: 205 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 264

Query: 221 IEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLD 280
             + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L 
Sbjct: 265 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 324

Query: 281 V---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFE 337
           +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +
Sbjct: 325 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLED 384

Query: 338 NHVLARYNIQKHSTLHMVL 356
              L+ YNIQK STLH+VL
Sbjct: 385 GRTLSDYNIQKESTLHLVL 403



 Score =  171 bits (433), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 107/283 (37%), Positives = 162/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 119 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 178

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 179 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 236

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 237 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 296

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 297 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 356

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 357 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 399



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/302 (33%), Positives = 160/302 (52%), Gaps = 12/302 (3%)

Query: 137 KEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLA 196
           ++ + IFVK  TG+ + LEV+ S  I +VK+ +    G+      +I+ GK+LED +TL+
Sbjct: 102 RDTMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 161

Query: 197 FYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQ 253
            Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q
Sbjct: 162 DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQ 221

Query: 254 DLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQD 310
            L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +
Sbjct: 222 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDN 281

Query: 311 VKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFI 370
           VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +        
Sbjct: 282 VKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLT 341

Query: 371 DPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVL 424
             +I+L +  S+  +  K K Q         + L+     L+D RTL+DY +     + L
Sbjct: 342 GKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 401

Query: 425 VF 426
           V 
Sbjct: 402 VL 403


>gi|296420280|ref|XP_002839703.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|13345367|gb|AAK19308.1| polyubiquitin [Tuber borchii]
 gi|295635897|emb|CAZ83894.1| unnamed protein product [Tuber melanosporum]
          Length = 306

 Score =  197 bits (501), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 119/301 (39%), Positives = 177/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/283 (37%), Positives = 162/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK+ +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|340504493|gb|EGR30931.1| ubiquitin family protein, putative [Ichthyophthirius multifiliis]
          Length = 329

 Score =  197 bits (501), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 119/302 (39%), Positives = 181/302 (59%), Gaps = 10/302 (3%)

Query: 62  MKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMT 120
           M++FVK  T +T T+ VEA    +++N+K  IQ KEGI  DQ  L++ GK L ED  T++
Sbjct: 25  MQIFVKTLTGKTITLDVEA--SDSIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLS 81

Query: 121 SMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADH 180
             NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S +I +VKA +    G+     
Sbjct: 82  DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDSIENVKAKIQDKEGIPPDQQ 141

Query: 181 IMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRD 237
            +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + +
Sbjct: 142 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDSIEN 201

Query: 238 VKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWG 294
           VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  
Sbjct: 202 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLT 261

Query: 295 GKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHM 354
           GKTITLDV+  +++++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+
Sbjct: 262 GKTITLDVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 321

Query: 355 VL 356
           VL
Sbjct: 322 VL 323



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 108/284 (38%), Positives = 165/284 (58%), Gaps = 8/284 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 39  LDVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 98

Query: 60  SEMKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
             M++FVK  T +T T+ VEA    +++N+K  IQ KEGI  DQ  L++ GK L ED  T
Sbjct: 99  GGMQIFVKTLTGKTITLDVEA--SDSIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 155

Query: 119 MTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAA 178
           ++  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S +I +VKA +    G+   
Sbjct: 156 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDSIENVKAKIQDKEGIPPD 215

Query: 179 DHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVV 235
              +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    +
Sbjct: 216 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDSI 275

Query: 236 RDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
            +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 276 ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 319



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 100/287 (34%), Positives = 156/287 (54%), Gaps = 12/287 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + L+V+ S +I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 25  MQIFVKTLTGKTITLDVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 84

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + L+VE    + +VK  + +   +    Q L 
Sbjct: 85  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDSIENVKAKIQDKEGIPPDQQRLI 144

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITLDV+  +++++VK 
Sbjct: 145 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDSIENVKA 204

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 205 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 264

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADY 414
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY
Sbjct: 265 ITLDVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 311


>gi|328867151|gb|EGG15534.1| ubiquitin [Dictyostelium fasciculatum]
          Length = 380

 Score =  197 bits (501), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 120/301 (39%), Positives = 178/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEGSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEGSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/283 (38%), Positives = 163/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEGSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEGSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/299 (34%), Positives = 159/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEGSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEGSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|241953793|ref|XP_002419618.1| ubiquitin, putative [Candida dubliniensis CD36]
 gi|302595951|sp|P0CG74.1|UBI4P_CANAL RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|2437825|emb|CAA90901.1| polyubiquitin [Candida albicans]
 gi|223642958|emb|CAX43214.1| ubiquitin, putative [Candida dubliniensis CD36]
          Length = 305

 Score =  197 bits (501), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 119/301 (39%), Positives = 177/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 107/283 (37%), Positives = 162/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK+ +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|119500448|ref|XP_001266981.1| polyubiquitin (UbiD), putative [Neosartorya fischeri NRRL 181]
 gi|121707680|ref|XP_001271909.1| polyubiquitin (UbiD), putative [Aspergillus clavatus NRRL 1]
 gi|119400057|gb|EAW10483.1| polyubiquitin (UbiD), putative [Aspergillus clavatus NRRL 1]
 gi|119415146|gb|EAW25084.1| polyubiquitin (UbiD), putative [Neosartorya fischeri NRRL 181]
          Length = 305

 Score =  197 bits (501), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 119/301 (39%), Positives = 177/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 107/283 (37%), Positives = 162/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK+ +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|358370809|dbj|GAA87419.1| polyubiquitin [Aspergillus kawachii IFO 4308]
          Length = 305

 Score =  197 bits (501), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 120/301 (39%), Positives = 176/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 108/283 (38%), Positives = 160/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 157/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKT 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|254574192|ref|XP_002494205.1| Ubiquitin [Komagataella pastoris GS115]
 gi|238034004|emb|CAY72026.1| Ubiquitin [Komagataella pastoris GS115]
          Length = 310

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/301 (39%), Positives = 177/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 107/283 (37%), Positives = 162/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK+ +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|322699454|gb|EFY91215.1| ubiquitin [Metarhizium acridum CQMa 102]
          Length = 343

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/306 (39%), Positives = 179/306 (58%), Gaps = 8/306 (2%)

Query: 57  QNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDT 116
           Q  + M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED 
Sbjct: 34  QTDAAMQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDG 91

Query: 117 ATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVS 176
            T++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+ 
Sbjct: 92  RTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIP 151

Query: 177 AADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLI 233
                +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE   
Sbjct: 152 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD 211

Query: 234 VVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFV 290
            + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFV
Sbjct: 212 TIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 271

Query: 291 KTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHS 350
           KT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK S
Sbjct: 272 KTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 331

Query: 351 TLHMVL 356
           TLH+VL
Sbjct: 332 TLHLVL 337



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 107/283 (37%), Positives = 162/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 53  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 112

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 113 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 170

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 171 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 230

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 231 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 290

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 291 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 333



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK+ +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 39  MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 98

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 99  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 158

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 159 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 218

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 219 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 278

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 279 ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 337



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 77/225 (34%), Positives = 118/225 (52%), Gaps = 9/225 (4%)

Query: 211 SSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLAS 270
           +++QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ 
Sbjct: 37  AAMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 96

Query: 271 YGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQS 327
           Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q 
Sbjct: 97  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 156

Query: 328 IVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMA 387
           ++FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  +  
Sbjct: 157 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 216

Query: 388 KVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 217 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 261


>gi|156064327|ref|XP_001598085.1| polyubiquitin [Sclerotinia sclerotiorum 1980]
 gi|154691033|gb|EDN90771.1| polyubiquitin [Sclerotinia sclerotiorum 1980 UF-70]
          Length = 305

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/301 (39%), Positives = 175/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L  YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLLDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 109/283 (38%), Positives = 160/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL  Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLLDYNIQKESTL 295



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/299 (34%), Positives = 157/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTL DY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLLDYNIQKESTLHLVL 299


>gi|15284034|dbj|BAB63445.1| ubiquitin 4 [Physarum polycephalum]
 gi|19909906|dbj|BAB87826.1| polyubiquitin [Physarum polycephalum]
          Length = 305

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/301 (39%), Positives = 175/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++++KT IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I  VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    +  V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIESV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T++ VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 106/283 (37%), Positives = 160/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+++K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T++++KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I  VK  +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
            VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 SVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 103/299 (34%), Positives = 155/299 (51%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I  VK  +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    +  VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T++ VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIESVKT 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|384493519|gb|EIE84010.1| polyubiquitin [Rhizopus delemar RA 99-880]
          Length = 305

 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/301 (38%), Positives = 179/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     +++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDSIENVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S +I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKQKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K+ + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +++++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDSIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 106/283 (37%), Positives = 163/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDSIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     +++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDSIENVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S +I +VK  +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKQKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK+ + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 160/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S +I +VK  +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDSIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK+ + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKQKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +++++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKQ 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVESSDSIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|226473052|emb|CAX71212.1| polyubiquitin [Schistosoma japonicum]
          Length = 304

 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 118/301 (39%), Positives = 177/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVL---PSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L ++       QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLCFRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P + +++VK K+ DK   P   Q ++FAGK+L +   L+ YNI K STL +V
Sbjct: 239 KTITLEVEPSDPIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIPKESTLPLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/283 (39%), Positives = 164/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +   F   +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLCFRGGMQIFVKTLTGKTITLEVEPSDPIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I     L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIPKESTL 295



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 160/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLCFRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDPIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIPKESTLPLVL 299



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 89/209 (42%), Positives = 128/209 (61%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV C +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLCFRGGMQIFVKTLTGKTITLEVEPSDPIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y++  E  L +
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIPKESTLPL 297


>gi|296425005|ref|XP_002842034.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295638291|emb|CAZ86225.1| unnamed protein product [Tuber melanosporum]
          Length = 305

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/301 (39%), Positives = 176/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKGKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/283 (37%), Positives = 160/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKGKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKGKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 100/287 (34%), Positives = 154/287 (53%), Gaps = 12/287 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK+ +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKGKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKG 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADY 414
           I+L +  S+  +  K K Q         + L+     L+D RTL+DY
Sbjct: 241 ITLEVESSDTIDNVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 287


>gi|170583349|ref|XP_001896539.1| ubiquitin [Brugia malayi]
 gi|158596243|gb|EDP34630.1| ubiquitin, putative [Brugia malayi]
          Length = 307

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/303 (39%), Positives = 177/303 (58%), Gaps = 10/303 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI +DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPADQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  + +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVETSDTVENVKAKIQDKEGIPPGQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T     + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGLQIFVKTLTSMTITLEVETSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTK--LEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           K  V +   +    Q L +AG +  LE  +T + Y I+    L +   L    QIFVKT 
Sbjct: 179 KAKVQDKEGIPPDQQRLIFAGKRKQLEDGRTFSDYNIQKESTLHLVLRLRGGMQIFVKTL 238

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 239 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 298

Query: 354 MVL 356
           +VL
Sbjct: 299 LVL 301



 Score =  164 bits (416), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 109/285 (38%), Positives = 159/285 (55%), Gaps = 8/285 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEASDTIENVKAKIQDKEGIPADQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     TV+N+K  IQ KEGI   Q  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVETSDTVENVKAKIQDKEGIPPGQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  L IFVK  T   + LEV+ S  I +VKA V    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGLQIFVKTLTSMTITLEVETSDTIENVKAKVQDKEGIPPDQ 192

Query: 180 HIMIYEGKK--LEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIV 234
             +I+ GK+  LED +T + Y+++ E  L +       +QIFV+T   + + LEVE    
Sbjct: 193 QRLIFAGKRKQLEDGRTFSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 252

Query: 235 VRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 297



 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 105/301 (34%), Positives = 158/301 (52%), Gaps = 14/301 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+ A    +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPADQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    V +VK  + +   +  G Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVETSDTVENVKAKIQDKEGIPPGQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT    TITL+V+  +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGLQIFVKTLTSMTITLEVETSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKR--LFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFID 371
           K+ DK   P   Q ++FAGKR  L +    + YNIQK STLH+VL     +         
Sbjct: 181 KVQDKEGIPPDQQRLIFAGKRKQLEDGRTFSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 240

Query: 372 PSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLV 425
            +I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV
Sbjct: 241 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 300

Query: 426 F 426
            
Sbjct: 301 L 301


>gi|85091236|ref|XP_958803.1| polyubiquitin [Neurospora crassa OR74A]
 gi|302595953|sp|P0CG70.1|UBI4P_NEUCR RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|295930|emb|CAA31530.1| ubiquitin [Neurospora crassa]
 gi|28920189|gb|EAA29567.1| polyubiquitin [Neurospora crassa OR74A]
 gi|336466506|gb|EGO54671.1| polyubiquitin [Neurospora tetrasperma FGSC 2508]
 gi|350286609|gb|EGZ67856.1| polyubiquitin [Neurospora tetrasperma FGSC 2509]
          Length = 305

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/301 (39%), Positives = 176/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K+ + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 107/283 (37%), Positives = 160/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK+ + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK+ + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQ 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|169847035|ref|XP_001830230.1| ubiquitin [Coprinopsis cinerea okayama7#130]
 gi|116508706|gb|EAU91601.1| ubiquitin [Coprinopsis cinerea okayama7#130]
          Length = 305

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/301 (39%), Positives = 175/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 110/283 (38%), Positives = 162/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 103/299 (34%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|225682563|gb|EEH20847.1| ubiquitin [Paracoccidioides brasiliensis Pb03]
          Length = 305

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/301 (39%), Positives = 177/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ ++K+ IQ KEGI  DQ  L++ GK L ED  T+T 
Sbjct: 1   MQIFVKTLTGKTITL-EVESVDTIDSVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLTD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 105/283 (37%), Positives = 161/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+  + I ++K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESVDTIDSVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLTDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 101/299 (33%), Positives = 155/299 (51%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+    I  VK+ +    G+      +I+ GK+LED +TL  Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESVDTIDSVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLTDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/209 (40%), Positives = 126/209 (60%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 297


>gi|15284032|dbj|BAB63444.1| ubiquitin 3 [Physarum polycephalum]
 gi|19909904|dbj|BAB87825.1| polyubiquitin [Physarum polycephalum]
          Length = 305

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/301 (39%), Positives = 174/301 (57%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++++KT IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI  ES +HLV   +  + IFVK  TG+ + LEV+ S  I  VK  +    G+      
Sbjct: 59  YNIHKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    +  V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIESV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T++ VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 106/283 (37%), Positives = 159/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+++K  I  KEGI  D   L FAG +LE GR L DY I   STLH + +  
Sbjct: 15  LEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIHKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T++++KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I  VK  +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
            VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 SVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/299 (34%), Positives = 154/299 (51%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I  VK  +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           +  E  L +       +QIFV+T   + + LEVE    +  VK  + +   +    Q L 
Sbjct: 61  IHKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T++ VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIESVKT 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|396492504|ref|XP_003843815.1| hypothetical protein LEMA_P014660.1 [Leptosphaeria maculans JN3]
 gi|312220395|emb|CBY00336.1| hypothetical protein LEMA_P014660.1 [Leptosphaeria maculans JN3]
          Length = 395

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/303 (39%), Positives = 179/303 (59%), Gaps = 8/303 (2%)

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
           ++M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 89  AKMQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 146

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 147 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 206

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 207 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 266

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 267 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 326

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 327 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 386

Query: 354 MVL 356
           +VL
Sbjct: 387 LVL 389



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 107/283 (37%), Positives = 162/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 105 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 164

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 165 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 222

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 223 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 282

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 283 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 342

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 343 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 385



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK+ +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 91  MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 150

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 151 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 210

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 211 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 270

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 271 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 330

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 331 ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 389



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/225 (34%), Positives = 117/225 (52%), Gaps = 9/225 (4%)

Query: 211 SSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLAS 270
           + +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ 
Sbjct: 89  AKMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 148

Query: 271 YGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQS 327
           Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q 
Sbjct: 149 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 208

Query: 328 IVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMA 387
           ++FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  +  
Sbjct: 209 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 268

Query: 388 KVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 269 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 313


>gi|336372565|gb|EGO00904.1| hypothetical protein SERLA73DRAFT_178893 [Serpula lacrymans var.
           lacrymans S7.3]
          Length = 312

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/301 (39%), Positives = 175/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
            
Sbjct: 299 F 299



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/283 (38%), Positives = 161/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/299 (34%), Positives = 159/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTL+DY +     + LVF
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVF 299



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 62/136 (45%), Positives = 83/136 (61%), Gaps = 3/136 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFC 135
           +  NI+ ES +HLVF 
Sbjct: 285 SDYNIQKESTLHLVFV 300


>gi|395328003|gb|EJF60398.1| polyubiquitin [Dichomitus squalens LYAD-421 SS1]
          Length = 305

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/301 (39%), Positives = 175/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED   ++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRPLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/283 (38%), Positives = 161/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRPLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 157/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED + L+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRPLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|164510214|emb|CAJ41447.1| polyubiquitin [Paralvinella grasslei]
          Length = 304

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 118/302 (39%), Positives = 177/302 (58%), Gaps = 8/302 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLGD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIDNVKAKIQDKEGIPPDQRR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ +  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKKSTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +++++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEASDSIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LA 357
           L+
Sbjct: 299 LS 300



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 108/283 (38%), Positives = 161/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLGDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEASDTIDNVKAKIQDKEGIPPDQRRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ +S +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKKSTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/299 (34%), Positives = 157/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL  Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLGDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    + L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIDNVKAKIQDKEGIPPDQRRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKKSTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEASDSIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|340375318|ref|XP_003386183.1| PREDICTED: polyubiquitin-like [Amphimedon queenslandica]
          Length = 968

 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 146/437 (33%), Positives = 228/437 (52%), Gaps = 23/437 (5%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ ++++K  I  KEGI  D   L F G +LE GR L DY I+N STLH + +  
Sbjct: 15  LEVEASDTVESVKEKIQDKEGIPPDQQRLIFVGKQLENGRTLSDYNIQNESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++NIK  IQ KEGI  DQ  L++ G+ L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTMENIKAKIQDKEGIPPDQQRLIFAGRQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRRRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPI----EEIVRLEVEVL 232
             +I+ GK LED +TL+ Y+++ E  L +   F   + IFV+  I     +I+ L+VE  
Sbjct: 193 QRLIFAGKILEDGRTLSDYNIQKESTLHLVLCFRHDMLIFVKIWIGNETGKIIFLQVEPS 252

Query: 233 IVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACK-TLASYGIKNNYVLD-VLPSPFQIFV 290
             + +VK  + +   +    Q L +AG +LE    TL  YGI+    LD +LP    I +
Sbjct: 253 NTIENVKAKIQDKERIPPDQQKLIFAGKQLENGHYTLLDYGIQRESTLDLLLPDHMIINI 312

Query: 291 KTWGGKTIT-LDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKH 349
           K   G  +T + +  Y  +  +K  +  K   P   Q + FAGK+L      + Y I+  
Sbjct: 313 KEVDGNVVTDVIINSYRNIGYIKADIKSKTNIPYDEQRLTFAGKQLSFGRTFSHYKIKDG 372

Query: 350 STLHMV-LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAAVKELLVDQVALQ-- 406
            TLH+V   P   I     I   P+I+L + +++  E    + Q  ++ + +DQ  L   
Sbjct: 373 DTLHLVPRRPGHTIFVETKILFSPTITLKVDLTDTIENVMSQIQDEIR-IPIDQQKLSTR 431

Query: 407 ------DDRTLADYGMD 417
                 +  TL+DY ++
Sbjct: 432 YRKRLDNSLTLSDYNIE 448



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 114/368 (30%), Positives = 189/368 (51%), Gaps = 24/368 (6%)

Query: 9   IKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFV- 66
           I  +KA I  K  I  D   L FAG +L  GR    Y I++  TLH + +      +FV 
Sbjct: 331 IGYIKADIKSKTNIPYDEQRLTFAGKQLSFGRTFSHYKIKDGDTLHLVPRRPGHT-IFVE 389

Query: 67  -KIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIK 125
            KI  + T T+   +   T++N+ + IQ +  I  DQ  L    +   +++ T++  NI+
Sbjct: 390 TKILFSPTITLKVDL-TDTIENVMSQIQDEIRIPIDQQKLSTRYRKRLDNSLTLSDYNIE 448

Query: 126 SESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYE 185
           ++SI++L    +   +I++++ TG I+ +EV  +  I D+K ++     +S  D  + Y 
Sbjct: 449 NKSILYLNHYHRGGENIYIRSVTGNIIVIEVLPTDTISDLKRMIEDKERISPTDQTLFYA 508

Query: 186 GKKLEDSKTLAFYDMKDECLLEMFPSS-----IQIFVRTPIEEIVRLEVEVLIVVRDVKE 240
           G+ L+D+ TLA YD+  E +L++F  S     + I+V+T   +   L V     + +VK 
Sbjct: 509 GQLLDDASTLASYDIPMESVLDLFIRSNPNPNMTIYVKTLTGKTFELNVIYCNTIGNVKT 568

Query: 241 IVANIIDLSLGNQDLFYAGTKLE-----------ACKTLASYGIKNNYV---LDVLPSPF 286
            +     +    Q + Y G +LE             KTL  +GIK+      L  L    
Sbjct: 569 KIEETGGIPCNQQKIIYDGRQLEDDYIEDTLLPNKIKTLFDHGIKDKSTLHLLLRLRGGM 628

Query: 287 QIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNI 346
           QIFVKT  G+TITL+V+P +T+++VK K+ DK   P   Q ++FAGK L ++  L+ YNI
Sbjct: 629 QIFVKTLTGRTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKVLVDDRTLSDYNI 688

Query: 347 QKHSTLHM 354
           +   T+ +
Sbjct: 689 KTKDTIDL 696



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 81/224 (36%), Positives = 129/224 (57%), Gaps = 6/224 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + I +K   GE ++LEV+ S  +  VK  +    G+      +I+ GK+LE+ +TL+ Y+
Sbjct: 1   MRISIKPLVGESLSLEVEASDTVESVKEKIQDKEGIPPDQQRLIFVGKQLENGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           +++E  L +       +QIFV+T   + + LEVE    + ++K  + +   +    Q L 
Sbjct: 61  IQNESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTMENIKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDVL---PSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L ++       QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGRQLEDGRTLSDYNIQKESTLHLVLRRRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLA 357
           K+ DK   P   Q ++FAGK L +   L+ YNIQK STLH+VL 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKILEDGRTLSDYNIQKESTLHLVLC 224



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 188/369 (50%), Gaps = 15/369 (4%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG  LE GR L DY I+  STLH +    
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKILEDGRTLSDYNIQKESTLHLVLCFR 226

Query: 60  SEMKLFVKIP-TNQTATVV--EAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDT 116
            +M +FVKI   N+T  ++  +  P +T++N+K  IQ KE I  DQ  L++ GK L+   
Sbjct: 227 HDMLIFVKIWIGNETGKIIFLQVEPSNTIENVKAKIQDKERIPPDQQKLIFAGKQLENGH 286

Query: 117 ATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFA-IRDVKAIVGSVVGV 175
            T+    I+ ES + L+     I++I  K   G +V   + +S+  I  +KA + S   +
Sbjct: 287 YTLLDYGIQRESTLDLLLPDHMIINI--KEVDGNVVTDVIINSYRNIGYIKADIKSKTNI 344

Query: 176 SAADHIMIYEGKKLEDSKTLAFYDMKDECLLEMFPSSI--QIFVRTPI--EEIVRLEVEV 231
              +  + + GK+L   +T + Y +KD   L + P      IFV T I     + L+V++
Sbjct: 345 PYDEQRLTFAGKQLSFGRTFSHYKIKDGDTLHLVPRRPGHTIFVETKILFSPTITLKVDL 404

Query: 232 LIVVRDVKEIVANIIDLSLGNQDLFYAGTK-LEACKTLASYGIKNN---YVLDVLPSPFQ 287
              + +V   + + I + +  Q L     K L+   TL+ Y I+N    Y+         
Sbjct: 405 TDTIENVMSQIQDEIRIPIDQQKLSTRYRKRLDNSLTLSDYNIENKSILYLNHYHRGGEN 464

Query: 288 IFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQ 347
           I++++  G  I ++V P +T+ D+K  + DK +     Q++ +AG+ L +   LA Y+I 
Sbjct: 465 IYIRSVTGNIIVIEVLPTDTISDLKRMIEDKERISPTDQTLFYAGQLLDDASTLASYDIP 524

Query: 348 KHSTLHMVL 356
             S L + +
Sbjct: 525 MESVLDLFI 533



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 130/453 (28%), Positives = 214/453 (47%), Gaps = 32/453 (7%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR--LVDYGIRNNSTLHFLHQN 58
           ++V+ S  I+N+KA I  KE I  D   L FAG +LE G   L+DYGI+  STL  L  +
Sbjct: 247 LQVEPSNTIENVKAKIQDKERIPPDQQKLIFAGKQLENGHYTLLDYGIQRESTLDLLLPD 306

Query: 59  LSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
              M + +K       T V    Y  +  IK  I+ K  I  D+  L + GK L     T
Sbjct: 307 --HMIINIKEVDGNVVTDVIINSYRNIGYIKADIKSKTNIPYDEQRLTFAGKQLSFG-RT 363

Query: 119 MTSMNIKSESIIHLV-FCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSA 177
            +   IK    +HLV   P   + +  K      + L+V  +  I +V + +   + +  
Sbjct: 364 FSHYKIKDGDTLHLVPRRPGHTIFVETKILFSPTITLKVDLTDTIENVMSQIQDEIRIPI 423

Query: 178 ADH-IMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLI 233
               +     K+L++S TL+ Y+++++ +L +         I++R+    I+ +EV    
Sbjct: 424 DQQKLSTRYRKRLDNSLTLSDYNIENKSILYLNHYHRGGENIYIRSVTGNIIVIEVLPTD 483

Query: 234 VVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVL----PSP-FQI 288
            + D+K ++ +   +S  +Q LFYAG  L+   TLASY I    VLD+     P+P   I
Sbjct: 484 TISDLKRMIEDKERISPTDQTLFYAGQLLDDASTLASYDIPMESVLDLFIRSNPNPNMTI 543

Query: 289 FVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHV-------- 340
           +VKT  GKT  L+V   NT+ +VK K+ +    P + Q I++ G++L ++++        
Sbjct: 544 YVKTLTGKTFELNVIYCNTIGNVKTKIEETGGIPCNQQKIIYDGRQLEDDYIEDTLLPNK 603

Query: 341 ---LARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ----- 392
              L  + I+  STLH++L     +          +I+L +  S+  E  K K Q     
Sbjct: 604 IKTLFDHGIKDKSTLHLLLRLRGGMQIFVKTLTGRTITLEVEPSDTIENVKAKIQDKEGI 663

Query: 393 -AAVKELLVDQVALQDDRTLADYGMDLSEKVVL 424
               + L+     L DDRTL+DY +   + + L
Sbjct: 664 PPDQQRLIFAGKVLVDDRTLSDYNIKTKDTIDL 696



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 117/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           ++I ++  + E + LEVE    V  VKE + +   +    Q L + G +LE  +TL+ Y 
Sbjct: 1   MRISIKPLVGESLSLEVEASDTVESVKEKIQDKEGIPPDQQRLIFVGKQLENGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+N   L +   L    QIFVKT  GKTITL+V+P +T++++K K+ DK   P   Q ++
Sbjct: 61  IQNESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTMENIKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAG++L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGRQLEDGRTLSDYNIQKESTLHLVLRRRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKILEDGRTLSDYNIQKESTLHLVL 223



 Score = 41.2 bits (95), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG  L   R L DY I+   T+   H+ +
Sbjct: 642 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKVLVDDRTLSDYNIKTKDTIDLQHKGM 701

Query: 60  SEMKL 64
               L
Sbjct: 702 ETQPL 706


>gi|226289971|gb|EEH45455.1| ubiquitin [Paracoccidioides brasiliensis Pb18]
          Length = 305

 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 118/301 (39%), Positives = 177/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ ++K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESVDTIDSVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/283 (37%), Positives = 161/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+  + I ++K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESVDTIDSVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 101/299 (33%), Positives = 156/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+    I  VK+ +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESVDTIDSVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/209 (40%), Positives = 126/209 (60%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 297


>gi|66802284|ref|XP_629924.1| hypothetical protein DDB_G0291928 [Dictyostelium discoideum AX4]
 gi|66825263|ref|XP_645986.1| hypothetical protein DDB_G0269458 [Dictyostelium discoideum AX4]
 gi|302595963|sp|P0CG80.1|UBIQI_DICDI RecName: Full=Polyubiquitin-I; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|302595964|sp|P0CG88.1|UBIQJ_DICDI RecName: Full=Polyubiquitin-J; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|60463302|gb|EAL61494.1| hypothetical protein DDB_G0291928 [Dictyostelium discoideum AX4]
 gi|60474142|gb|EAL72079.1| hypothetical protein DDB_G0269458 [Dictyostelium discoideum AX4]
          Length = 305

 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 118/301 (39%), Positives = 176/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E      ++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  + +++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 108/283 (38%), Positives = 162/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E      ++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/299 (34%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  + +++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|157093353|gb|ABV22331.1| ubiquitin [Noctiluca scintillans]
          Length = 302

 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 120/302 (39%), Positives = 178/302 (58%), Gaps = 10/302 (3%)

Query: 62  MKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMT 120
           M++FVK  T +T T+ VEA    T+ N+K  IQ KEGI  DQ  L++ GK L ED  T++
Sbjct: 1   MQIFVKTLTGKTITLDVEA--SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLS 57

Query: 121 SMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADH 180
             NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+     
Sbjct: 58  DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIDNVKAKIQDKEGIPPDQQ 117

Query: 181 IMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRD 237
            +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + +
Sbjct: 118 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIDN 177

Query: 238 VKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWG 294
           VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  
Sbjct: 178 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLT 237

Query: 295 GKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHM 354
           GKTITLDV+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ Y+IQK STLH+
Sbjct: 238 GKTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYSIQKESTLHL 297

Query: 355 VL 356
           VL
Sbjct: 298 VL 299



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/284 (38%), Positives = 162/284 (57%), Gaps = 8/284 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
             M++FVK  T +T T+ VEA    T+ N+K  IQ KEGI  DQ  L++ GK L ED  T
Sbjct: 75  GGMQIFVKTLTGKTITLDVEA--SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 131

Query: 119 MTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAA 178
           ++  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+   
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIDNVKAKIQDKEGIPPD 191

Query: 179 DHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVV 235
              +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    +
Sbjct: 192 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTI 251

Query: 236 RDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
            +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 252 DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYSIQKESTL 295



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + L+V+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + L+VE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITLDV+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYSIQKESTLHLVL 299


>gi|145498417|ref|XP_001435196.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124402326|emb|CAK67799.1| unnamed protein product [Paramecium tetraurelia]
          Length = 369

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 134/364 (36%), Positives = 194/364 (53%), Gaps = 23/364 (6%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I  +KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ +  P  T+  +K  IQ KEGI  DQ  L++      E +  +
Sbjct: 75  GGMQIFVKTLTGKTITL-DVEPSDTIDAVKAKIQDKEGIPPDQQRLIF-----AEHSQII 128

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAA-TGEIVNLEVKHSFAIRDVKAIVGSVVGVSAA 178
           T         I     P     I  +   TG+ + L+V+ S  I  VKA +    G+   
Sbjct: 129 T---------IQRGINPSLGFKIKRRNTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPD 179

Query: 179 DHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVV 235
              +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    +
Sbjct: 180 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTI 239

Query: 236 RDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKT 292
             VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT
Sbjct: 240 DAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKT 299

Query: 293 WGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTL 352
             GKTITLDV+P +T+  VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STL
Sbjct: 300 LTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 359

Query: 353 HMVL 356
           H+VL
Sbjct: 360 HLVL 363



 Score =  164 bits (415), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 126/375 (33%), Positives = 188/375 (50%), Gaps = 22/375 (5%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +  P  T+  +K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-DVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I  VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEMFPSSIQIFVR-TPIEEIVRLEVEVLIVVRDVKE 240
           +I+     E S+ +      +  L        +I  R T   + + L+VE    +  VK 
Sbjct: 119 LIF----AEHSQIITIQRGINPSL------GFKIKRRNTLTGKTITLDVEPSDTIDAVKA 168

Query: 241 IVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKT 297
            + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKT
Sbjct: 169 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 228

Query: 298 ITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLA 357
           ITLDV+P +T+  VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL 
Sbjct: 229 ITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 288

Query: 358 PSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTL 411
               +          +I+L +  S+  +  K K Q         + L+     L+D RTL
Sbjct: 289 LRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 348

Query: 412 ADYGMDLSEKVVLVF 426
           +DY +     + LV 
Sbjct: 349 SDYNIQKESTLHLVL 363


>gi|440473707|gb|ELQ42489.1| RING finger protein [Magnaporthe oryzae Y34]
          Length = 1058

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/301 (39%), Positives = 177/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 121/354 (34%), Positives = 189/354 (53%), Gaps = 20/354 (5%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV-------LPS----- 284
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +       +PS     
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMPSYNYHL 312

Query: 285 PFQIFVKTWGGKTIT-LDVQPYN-TVQDVKVKLFDKLQTPLHLQSIVFAGKRLF 336
            F+++       T++  D  P N  +    V +F +L     +QS+   GK  +
Sbjct: 313 KFELYPNPDPEATLSHYDKNPANIWLPTDAVGIFGQLPPHPRVQSVTRGGKPTW 366



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK+ +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|16071|emb|CAA48140.1| ubiquitin [Antirrhinum majus]
          Length = 296

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 116/287 (40%), Positives = 165/287 (57%), Gaps = 7/287 (2%)

Query: 76  VVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFC 135
            +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV  
Sbjct: 5   TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLR 63

Query: 136 PKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTL 195
            +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL
Sbjct: 64  LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 123

Query: 196 AFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGN 252
           A Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    
Sbjct: 124 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 183

Query: 253 QDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQ 309
           Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ 
Sbjct: 184 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 243

Query: 310 DVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 244 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 290



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/283 (39%), Positives = 160/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 6   LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 65

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 66  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 123

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 124 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 183

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 184 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 243

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 244 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 286



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/290 (35%), Positives = 152/290 (52%), Gaps = 12/290 (4%)

Query: 149 GEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
           G+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 1   GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 60

Query: 209 ---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEAC 265
                  +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  
Sbjct: 61  VLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDG 120

Query: 266 KTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTP 322
           +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P
Sbjct: 121 RTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 180

Query: 323 LHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISE 382
              Q ++FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+
Sbjct: 181 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD 240

Query: 383 VKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
             +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 241 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 290


>gi|295661227|ref|XP_002791169.1| ubiquitin [Paracoccidioides sp. 'lutzii' Pb01]
 gi|226281096|gb|EEH36662.1| ubiquitin [Paracoccidioides sp. 'lutzii' Pb01]
          Length = 305

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/301 (38%), Positives = 176/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +     T+  +K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-DVESGDTIDGVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  167 bits (424), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 105/283 (37%), Positives = 159/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+  + I  +K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDVESGDTIDGVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 156/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + L+V+    I  VK+ +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLDVESGDTIDGVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/209 (40%), Positives = 126/209 (60%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 297


>gi|440482103|gb|ELQ62622.1| RING finger protein [Magnaporthe oryzae P131]
          Length = 1056

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/301 (39%), Positives = 177/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 121/354 (34%), Positives = 189/354 (53%), Gaps = 20/354 (5%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV-------LPS----- 284
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +       +PS     
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMPSYNYHL 312

Query: 285 PFQIFVKTWGGKTIT-LDVQPYN-TVQDVKVKLFDKLQTPLHLQSIVFAGKRLF 336
            F+++       T++  D  P N  +    V +F +L     +QS+   GK  +
Sbjct: 313 KFELYPNPDPEATLSHYDKNPANIWLPTDAVGIFGQLPPHPRVQSVTRGGKPTW 366



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK+ +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|449266037|gb|EMC77164.1| Ubiquitin, partial [Columba livia]
          Length = 290

 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/292 (39%), Positives = 172/292 (58%), Gaps = 8/292 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQ 347
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQ
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 109/278 (39%), Positives = 163/278 (58%), Gaps = 6/278 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIK 274
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/289 (35%), Positives = 157/289 (54%), Gaps = 12/289 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGM 416
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 289



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 118/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223


>gi|225558948|gb|EEH07231.1| ubiquitin [Ajellomyces capsulatus G186AR]
 gi|240281869|gb|EER45372.1| polyubiquitin [Ajellomyces capsulatus H143]
 gi|325088005|gb|EGC41315.1| polyubiquitin [Ajellomyces capsulatus H88]
          Length = 305

 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/301 (38%), Positives = 176/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +     T+  +K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-DVESADTIDAVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/283 (37%), Positives = 160/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ ++ I  +K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDVESADTIDAVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 157/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + L+V+ +  I  VK+ +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLDVESADTIDAVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/209 (40%), Positives = 126/209 (60%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 297


>gi|239611163|gb|EEQ88150.1| ubiquitin [Ajellomyces dermatitidis ER-3]
          Length = 305

 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/301 (38%), Positives = 176/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +     T+  +K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-DVESGDTIDAVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/283 (37%), Positives = 159/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+  + I  +K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDVESGDTIDAVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 156/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + L+V+    I  VK+ +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLDVESGDTIDAVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/209 (40%), Positives = 126/209 (60%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 297


>gi|154275270|ref|XP_001538486.1| polyubiquitin [Ajellomyces capsulatus NAm1]
 gi|150414926|gb|EDN10288.1| polyubiquitin [Ajellomyces capsulatus NAm1]
          Length = 305

 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 117/301 (38%), Positives = 176/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +     T+  +K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-DVESADTIDAVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVENSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  167 bits (424), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 105/283 (37%), Positives = 161/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ ++ I  +K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDVESADTIDAVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV++S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVENSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 157/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + L+V+ +  I  VK+ +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLDVESADTIDAVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVENSDTIDNVKS 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 85/209 (40%), Positives = 126/209 (60%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTIT-LEVENSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 297


>gi|425774856|gb|EKV13151.1| hypothetical protein PDIG_39650 [Penicillium digitatum PHI26]
          Length = 309

 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 118/305 (38%), Positives = 175/305 (57%), Gaps = 12/305 (3%)

Query: 62  MKLFVKIP----TNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTA 117
           M +   IP    T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  
Sbjct: 1   MDILANIPLSLVTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGR 58

Query: 118 TMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSA 177
           T++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+  
Sbjct: 59  TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPP 118

Query: 178 ADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIV 234
               +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    
Sbjct: 119 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 178

Query: 235 VRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVK 291
           + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVK
Sbjct: 179 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVK 238

Query: 292 TWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHST 351
           T  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK ST
Sbjct: 239 TLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 298

Query: 352 LHMVL 356
           LH+VL
Sbjct: 299 LHLVL 303



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/283 (37%), Positives = 162/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 19  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 78

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 79  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 136

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 137 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 196

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 197 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 256

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 257 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 299



 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 98/291 (33%), Positives = 153/291 (52%), Gaps = 12/291 (4%)

Query: 148 TGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLE 207
           TG+ + LEV+ S  I +VK+ +    G+      +I+ GK+LED +TL+ Y+++ E  L 
Sbjct: 13  TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 72

Query: 208 M---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEA 264
           +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE 
Sbjct: 73  LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLED 132

Query: 265 CKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQT 321
            +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   
Sbjct: 133 GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGI 192

Query: 322 PLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISIS 381
           P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S
Sbjct: 193 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESS 252

Query: 382 EVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           +  +  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 253 DTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 303


>gi|18398638|ref|NP_566357.1| polyubiquitin 8 [Arabidopsis thaliana]
 gi|75101960|sp|Q39256.1|UBQ8_ARATH RecName: Full=Polyubiquitin 8; Contains: RecName:
           Full=Ubiquitin-related 1; Contains: RecName:
           Full=Ubiquitin-related 2; Contains: RecName:
           Full=Ubiquitin-related 3; Contains: RecName:
           Full=Ubiquitin-related 4; Contains: RecName:
           Full=Ubiquitin-related 5; Contains: RecName:
           Full=Ubiquitin-related 6; Contains: RecName:
           Full=Ubiquitin-related 7; Contains: RecName:
           Full=Ubiquitin-related 8; Flags: Precursor
 gi|6681339|gb|AAF23256.1|AC015985_14 polyubiquitin (ubq8) [Arabidopsis thaliana]
 gi|6682255|gb|AAF23307.1|AC016661_32 polyubiquitin [Arabidopsis thaliana]
 gi|870794|gb|AAA68879.1| polyubiquitin [Arabidopsis thaliana]
 gi|332641292|gb|AEE74813.1| polyubiquitin 8 [Arabidopsis thaliana]
          Length = 631

 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 156/453 (34%), Positives = 230/453 (50%), Gaps = 33/453 (7%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAG-RLVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I N+KA I  KEGI  D   L FAG +LE G  L DY I+  STLH + +  
Sbjct: 17  LDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYNIQKESTLHLVLRLR 76

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FV+  T +T T +E     T+ N+K  IQ KEGI   Q  L++ GK L ED  T+
Sbjct: 77  GGMQIFVQTLTGKTIT-LEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQL-EDGRTL 134

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATG-----EIVNLEVKHSFAIRDVKAIVGSVVG 174
              NI+ ES +HLV      + IFV   +G     + + L+V+ S  I +VKA +    G
Sbjct: 135 ADYNIQKESTLHLVLRLCGGMQIFVSTFSGKNFTSDTLTLKVESSDTIENVKAKIQDREG 194

Query: 175 VSAADHIMIYEGKKL--EDSKTLAFYDMKDE---CLLEMFPSSIQIFVRT-PIEEIVR-- 226
           +      +I+ G++L  ED++TLA Y +++    CL       + IFV+  P        
Sbjct: 195 LRPDHQRLIFHGEELFTEDNRTLADYGIRNRSTLCLALRLRGDMYIFVKNLPYNSFTGEN 254

Query: 227 --LEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNN---YVLDV 281
             LEVE    + +VK  + +   + +    L +AG  LE  +TLA Y I+     Y++  
Sbjct: 255 FILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEGGRTLAHYNIQKGSTLYLVTR 314

Query: 282 LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDK--LQTPLHLQSIVFAGKRLFENH 339
                QIFVKT   K I L+V+ ++T+++VK  + DK  +Q   +LQ ++F GK L +  
Sbjct: 315 FRCGMQIFVKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDGC 374

Query: 340 VLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAAVKE-- 397
            LA Y+IQK STLH+VL     +     +F    I+L +  S+  +  K K Q  V    
Sbjct: 375 TLADYSIQKESTLHLVLGMQIFV----KLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPP 430

Query: 398 ----LLVDQVALQDDRTLADYGMDLSEKVVLVF 426
               LL     LQD RTL DY +     + L F
Sbjct: 431 DQQILLFRGGQLQDGRTLGDYNIRNESTLHLFF 463



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 131/377 (34%), Positives = 203/377 (53%), Gaps = 22/377 (5%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA +  KE I  D+  L FAG  LE GR L  Y I+  STL+ + +  
Sbjct: 257 LEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEGGRTLAHYNIQKGSTLYLVTRFR 316

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQS--DQFTLVYDGKLLKEDTA 117
             M++FVK  T +   + E   + T++N+K M+Q KEGIQ   +   L++ GK LK D  
Sbjct: 317 CGMQIFVKTLTRKRINL-EVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELK-DGC 374

Query: 118 TMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSA 177
           T+   +I+ ES +HLV      + IFVK   G+I+ LEV  S  I+ VKA +   VG   
Sbjct: 375 TLADYSIQKESTLHLVLG----MQIFVKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPP 430

Query: 178 ADHIMIYEGKKLEDSKTLAFYDMKDECLLEMF---PSSIQIFVRT-------PIEEIVRL 227
              I+++ G +L+D +TL  Y++++E  L +F      +QIFV+T       P  + + L
Sbjct: 431 DQQILLFRGGQLQDGRTLGDYNIRNESTLHLFFHIRHGMQIFVKTFSFSGETPTCKTITL 490

Query: 228 EVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVL---PS 284
           EVE    + +VK  + + + + L  Q L + G  L   +TL  Y I+    +  L     
Sbjct: 491 EVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGSRTLLDYNIQKGSTIHQLFLQRG 550

Query: 285 PFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARY 344
             QIF+KT  GKTI L+V+  +T+ +VK K+  K       Q ++F G++L +   L  Y
Sbjct: 551 GMQIFIKTLTGKTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDGVTLGDY 610

Query: 345 NIQKHSTLHMVLAPSSR 361
           +I K STL++VL    R
Sbjct: 611 DIHKKSTLYLVLRLRQR 627



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 149/459 (32%), Positives = 229/459 (49%), Gaps = 38/459 (8%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++VK S+ I N+KA I  KEGI      L FAG +LE GR L DY I+  STLH + +  
Sbjct: 93  LEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLC 152

Query: 60  SEMKLFVKIPTNQTAT----VVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGK-LLKE 114
             M++FV   + +  T     ++     T++N+K  IQ +EG++ D   L++ G+ L  E
Sbjct: 153 GGMQIFVSTFSGKNFTSDTLTLKVESSDTIENVKAKIQDREGLRPDHQRLIFHGEELFTE 212

Query: 115 DTATMTSMNIKSESIIHLVFCPKEILSIFVK-----AATGEIVNLEVKHSFAIRDVKAIV 169
           D  T+    I++ S + L    +  + IFVK     + TGE   LEV+ S  I +VKA +
Sbjct: 213 DNRTLADYGIRNRSTLCLALRLRGDMYIFVKNLPYNSFTGENFILEVESSDTIDNVKAKL 272

Query: 170 GSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDEC---LLEMFPSSIQIFVRTPIEEIVR 226
                +    H +I+ GK LE  +TLA Y+++      L+  F   +QIFV+T   + + 
Sbjct: 273 QDKERIPMDLHRLIFAGKPLEGGRTLAHYNIQKGSTLYLVTRFRCGMQIFVKTLTRKRIN 332

Query: 227 LEVEVLIVVRDVKEIVANI--IDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVLPS 284
           LEVE    + +VK +V +   I      Q L + G +L+   TLA Y I+    L ++  
Sbjct: 333 LEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDGCTLADYSIQKESTLHLVLG 392

Query: 285 PFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARY 344
             QIFVK +GGK ITL+V   +T++ VK K+ DK+ +P   Q ++F G +L +   L  Y
Sbjct: 393 -MQIFVKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDY 451

Query: 345 NIQKHSTLHMVLAPSSRIIELPLIFID-----------PSISLSISISEVKEMAKVKFQA 393
           NI+  STLH+       I     IF+             +I+L +  S+  +  KVK Q 
Sbjct: 452 NIRNESTLHLFF----HIRHGMQIFVKTFSFSGETPTCKTITLEVESSDTIDNVKVKIQH 507

Query: 394 AV------KELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
            V      + L+     L   RTL DY +     +  +F
Sbjct: 508 KVGIPLDRQRLIFGGRVLVGSRTLLDYNIQKGSTIHQLF 546



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 129/391 (32%), Positives = 201/391 (51%), Gaps = 28/391 (7%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           ++++ K  T +T T+ +     ++ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 3   IQIYAKTLTEKTITL-DVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQL-EDGLTLAD 60

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFV+  TG+ + LEVK S  I +VKA +    G+      
Sbjct: 61  YNIQKESTLHLVLRLRGGMQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQR 120

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRT-----PIEEIVRLEVEVLI 233
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV T        + + L+VE   
Sbjct: 121 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLCGGMQIFVSTFSGKNFTSDTLTLKVESSD 180

Query: 234 VVRDVKEIVANIIDLSLGNQDLFYAGTKL--EACKTLASYGIKNNYVLDV---LPSPFQI 288
            + +VK  + +   L   +Q L + G +L  E  +TLA YGI+N   L +   L     I
Sbjct: 181 TIENVKAKIQDREGLRPDHQRLIFHGEELFTEDNRTLADYGIRNRSTLCLALRLRGDMYI 240

Query: 289 FVK-----TWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLAR 343
           FVK     ++ G+   L+V+  +T+ +VK KL DK + P+ L  ++FAGK L     LA 
Sbjct: 241 FVKNLPYNSFTGENFILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEGGRTLAH 300

Query: 344 YNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSI----SISEVKEMAK----VKFQAAV 395
           YNIQK STL++V      +           I+L +    +I  VK M +    ++ Q  +
Sbjct: 301 YNIQKGSTLYLVTRFRCGMQIFVKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQPNL 360

Query: 396 KELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           + L+     L+D  TLADY +     + LV 
Sbjct: 361 QRLIFLGKELKDGCTLADYSIQKESTLHLVL 391



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 82/226 (36%), Positives = 119/226 (52%), Gaps = 26/226 (11%)

Query: 212 SIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASY 271
           +IQI+ +T  E+ + L+VE    + +VK  + N   + L  Q L +AG +LE   TLA Y
Sbjct: 2   TIQIYAKTLTEKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADY 61

Query: 272 GIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSI 328
            I+    L +   L    QIFV+T  GKTITL+V+  +T+ +VK K+ DK       Q +
Sbjct: 62  NIQKESTLHLVLRLRGGMQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRL 121

Query: 329 VFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDP---------SISLSIS 379
           +FAGK+L +   LA YNIQK STLH+VL    R+     IF+           +++L + 
Sbjct: 122 IFAGKQLEDGRTLADYNIQKESTLHLVL----RLCGGMQIFVSTFSGKNFTSDTLTLKVE 177

Query: 380 ISEVKEMAKVKFQAAVKELLVDQVAL---------QDDRTLADYGM 416
            S+  E  K K Q   + L  D   L         +D+RTLADYG+
Sbjct: 178 SSDTIENVKAKIQDR-EGLRPDHQRLIFHGEELFTEDNRTLADYGI 222


>gi|70993888|ref|XP_751791.1| polyubiquitin UbiD/Ubi4 [Aspergillus fumigatus Af293]
 gi|66849425|gb|EAL89753.1| polyubiquitin UbiD/Ubi4, putative [Aspergillus fumigatus Af293]
 gi|159125290|gb|EDP50407.1| polyubiquitin UbiD/Ubi4, putative [Aspergillus fumigatus A1163]
          Length = 314

 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/310 (38%), Positives = 177/310 (57%), Gaps = 17/310 (5%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLV---------FCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSV 172
            NI+ ES +HLV         + P + L   VK  TG+ + LEV+ S  I +VK+ +   
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIWSPADSLITVVKTLTGKTITLEVESSDTIDNVKSKIQDK 118

Query: 173 VGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEV 229
            G+      +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEV
Sbjct: 119 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 178

Query: 230 EVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPF 286
           E    + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    
Sbjct: 179 ESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 238

Query: 287 QIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNI 346
           QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNI
Sbjct: 239 QIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 298

Query: 347 QKHSTLHMVL 356
           QK STLH+VL
Sbjct: 299 QKESTLHLVL 308



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/292 (36%), Positives = 162/292 (55%), Gaps = 15/292 (5%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLF---------VKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGK 110
             M+++         VK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK
Sbjct: 75  GGMQIWSPADSLITVVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGK 133

Query: 111 LLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVG 170
            L ED  T++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ + 
Sbjct: 134 QL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQ 192

Query: 171 SVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRL 227
              G+      +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L
Sbjct: 193 DKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL 252

Query: 228 EVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           EVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 304



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 101/308 (32%), Positives = 158/308 (51%), Gaps = 21/308 (6%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK+ +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIF---------VRTPIEEIVRLEVEVLIVVRDVKEIVANIID 247
           ++ E  L +       +QI+         V+T   + + LEVE    + +VK  + +   
Sbjct: 61  IQKESTLHLVLRLRGGMQIWSPADSLITVVKTLTGKTITLEVESSDTIDNVKSKIQDKEG 120

Query: 248 LSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQP 304
           +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+ 
Sbjct: 121 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVES 180

Query: 305 YNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIE 364
            +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +  
Sbjct: 181 SDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 240

Query: 365 LPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDL 418
                   +I+L +  S+  +  K K Q         + L+     L+D RTL+DY +  
Sbjct: 241 FVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 300

Query: 419 SEKVVLVF 426
              + LV 
Sbjct: 301 ESTLHLVL 308


>gi|357498825|ref|XP_003619701.1| Ubiquitin-like protein [Medicago truncatula]
 gi|355494716|gb|AES75919.1| Ubiquitin-like protein [Medicago truncatula]
          Length = 290

 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/301 (40%), Positives = 168/301 (55%), Gaps = 23/301 (7%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE        
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVER------- 171

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
                         Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 172 --------GYPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 223

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 224 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 283

Query: 356 L 356
           L
Sbjct: 284 L 284



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/283 (37%), Positives = 152/283 (53%), Gaps = 21/283 (7%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+                G     
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVER---------------GYPPDQ 177

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 178 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 237

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 238 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 280



 Score =  141 bits (355), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 101/299 (33%), Positives = 148/299 (49%), Gaps = 27/299 (9%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+          
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVERG-------- 172

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
                   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +
Sbjct: 173 -------YPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 225

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 226 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 284


>gi|367029699|ref|XP_003664133.1| hypothetical protein MYCTH_2315548 [Myceliophthora thermophila ATCC
           42464]
 gi|347011403|gb|AEO58888.1| hypothetical protein MYCTH_2315548 [Myceliophthora thermophila ATCC
           42464]
          Length = 305

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 116/301 (38%), Positives = 173/301 (57%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     +++ +K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESADSIETVKNKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ +  I  VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESADTIETVKNKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    +  V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESADTIETV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T++ VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESADTIETVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/283 (36%), Positives = 157/283 (55%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ ++ I+ +K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESADSIETVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T++ +K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESADTIETVKNKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ +  I  VK  +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESADTIETVKNKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESADTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
            VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 TVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/299 (33%), Positives = 156/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ + +I  VK  +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESADSIETVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    +  VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESADTIETVKNKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T++ VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESADTIETVKN 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  ++  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVESADTIETVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>gi|320031616|gb|EFW13576.1| ubiquitin [Coccidioides posadasii str. Silveira]
          Length = 625

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/305 (39%), Positives = 174/305 (57%), Gaps = 8/305 (2%)

Query: 58  NLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTA 117
            L   +  VK  T +T T+ E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  
Sbjct: 317 RLPSCRSLVKTLTGKTITL-EVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGR 374

Query: 118 TMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSA 177
           T++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+  
Sbjct: 375 TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPP 434

Query: 178 ADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIV 234
               +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    
Sbjct: 435 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 494

Query: 235 VRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVK 291
           + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVK
Sbjct: 495 IDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVK 554

Query: 292 TWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHST 351
           T  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK ST
Sbjct: 555 TLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 614

Query: 352 LHMVL 356
           LH+VL
Sbjct: 615 LHLVL 619



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/283 (38%), Positives = 160/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 335 LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 394

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 395 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 452

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 453 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQ 512

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 513 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 572

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 573 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 615



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/310 (32%), Positives = 161/310 (51%), Gaps = 14/310 (4%)

Query: 131 HLVFCPKEILSI--FVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKK 188
           ++++ P  + S    VK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+
Sbjct: 310 YILYRPSRLPSCRSLVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQ 369

Query: 189 LEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANI 245
           LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + + 
Sbjct: 370 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK 429

Query: 246 IDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDV 302
             +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V
Sbjct: 430 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 489

Query: 303 QPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRI 362
           +  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +
Sbjct: 490 ESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 549

Query: 363 IELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGM 416
                     +I+L +  S+  +  K K Q         + L+     L+D RTL+DY +
Sbjct: 550 QIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 609

Query: 417 DLSEKVVLVF 426
                + LV 
Sbjct: 610 QKESTLHLVL 619


>gi|3789940|gb|AAC67551.1| tetra-ubiquitin [Saccharum hybrid cultivar H32-8560]
          Length = 305

 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 119/301 (39%), Positives = 170/301 (56%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E      +  +   IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDXIDXVXAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLXD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES  HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTXHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDEC---LLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E    L+      +QIFV+T   + + LEVE      +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQXESXXHLVLRXRGGMQIFVKTXTGKTITLEVESSDTXDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVL---PSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L ++       QIFVKT  G
Sbjct: 179 KXKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRXRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 106/283 (37%), Positives = 154/283 (54%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I  + A I  KEGI  D   L FAG +LE GR L DY I+  ST H + +  
Sbjct: 15  LEVESSDXIDXVXAKIQDKEGIPPDQQRLIFAGKQLEDGRTLXDYNIQKESTXHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES  HLV   +  + IFVK  TG+ + LEV+ S    +VK  +    G+    
Sbjct: 133 ADYNIQXESXXHLVLRXRGGMQIFVKTXTGKTITLEVESSDTXDNVKXKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEMF---PSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRXRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 295



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 103/299 (34%), Positives = 153/299 (51%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I  V A +    G+      +I+ GK+LED +TL  Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDXIDXVXAKIQDKEGIPPDQQRLIFAGKQLEDGRTLXDYN 60

Query: 200 MKDEC---LLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E    L+      +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTXHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDVL---PSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+      ++       QIFVKT  GKTITL+V+  +T  +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQXESXXHLVLRXRGGMQIFVKTXTGKTITLEVESSDTXDNVKX 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRXRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/209 (41%), Positives = 121/209 (57%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  S  H + +  
Sbjct: 91  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQXESXXHLVLRXR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T  N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTXTGKTIT-LEVESSDTXDNVKXKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 ADYNIQKESTLHLVLRXRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 269 QRLIFAGKQLEDGRTLADYNIQKESTLHL 297


>gi|392569339|gb|EIW62512.1| ubiquitin-domain-containing protein [Trametes versicolor FP-101664
           SS1]
          Length = 769

 Score =  187 bits (476), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 129/360 (35%), Positives = 206/360 (57%), Gaps = 14/360 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGRLV-DYGIRNNSTLHFLHQNL 59
           ++   S+ I+N+KAMIH KEG++ +   L FAG +L++ R V DY +R  ST+  + + L
Sbjct: 395 LEADSSDTIENVKAMIHDKEGVAPNQQRLIFAGKQLDSRRTVSDYNMRKGSTVFLIFRVL 454

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++ VK  + +T T+ E  P  T+ +IKT IQ KEG   DQ  + +    L+ED  T+
Sbjct: 455 DGMQISVKTLSGKTITL-EVKPLDTIGSIKTKIQAKEGTPPDQQCVKFADDELEED-RTL 512

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAA-TGEIVNLEVKHSFAIRDVKAIVGSVVGVSAA 178
              NI+  S + LV        IFVK A T E   LEVK S  I+DVK       GV+ A
Sbjct: 513 LDYNIQWNSTLQLV----GRFQIFVKRALTRETTPLEVKSSDTIKDVKEKYQDKEGVAPA 568

Query: 179 DHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVV 235
              +I+ GK L+D   L+   ++ E  L +    P  +QIFV++   + + ++ +    +
Sbjct: 569 HQRLIFAGKLLQDGCVLSDCGIQKESTLHLVIRLPG-MQIFVKSFTGKTITIKAKPSDTI 627

Query: 236 RDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVLPSPFQIFVKTWGG 295
             V+E + ++  +S  +  L +AG +LE  + L+ Y I+    L ++   FQIFV++  G
Sbjct: 628 GRVREKIRDVEGISP-DSILKFAGKELEDGRLLSDYNIQGEDTLHLI-RYFQIFVRSMRG 685

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KT+TL+ +P++TV++VK K+ DK   P  LQ ++FAGK+L +   L+ Y+I  +STLH+V
Sbjct: 686 KTVTLEAEPFDTVENVKAKIHDKEGCPPDLQRLIFAGKQLVDGRTLSDYSIPNNSTLHLV 745



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 140/480 (29%), Positives = 230/480 (47%), Gaps = 68/480 (14%)

Query: 1   MKVKKSEPIKNLKAMIHVKEG-------ISEDICDLFFAGDRLEAGR-LVDYGIRNNSTL 52
           ++V+ S+ I N+KA I  KEG       +  D   L FAG +LE GR L DY I+  STL
Sbjct: 60  LEVESSDTIDNVKAKIQDKEGTDIPSASLPPDQQRLIFAGKQLEDGRTLSDYSIQKESTL 119

Query: 53  HFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLL 112
           H     L  M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L
Sbjct: 120 H-----LGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL 173

Query: 113 KEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSV 172
            ED  T++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I + KA +   
Sbjct: 174 -EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNSKAKIQDK 232

Query: 173 VGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEMFPSS----IQIFVRTPIEEIVRLE 228
            G+      +I+ GK+LED +TL+ Y+++ E  L +  S     + I +   I + +  E
Sbjct: 233 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVWSDATQVVCIMIVKSIPDAMFFE 292

Query: 229 VEVLIVVRDVKEIVANIIDLSLGNQDLFYAG---TKLEA---------CKTLASYGIKNN 276
            E     R     V   +D     +   + G    +L+A          + +    ++ +
Sbjct: 293 WEATSWFRPGG--VEPFVDCLEQARMRIWTGMLPGRLQADRGSPLDHPSEAVYRANLRQS 350

Query: 277 YVLD--------------------VLPSPFQIFVKTWG-GKTITLDVQPYNTVQDVKVKL 315
           +VL                     ++ +   IFVK    GKTI L+    +T+++VK  +
Sbjct: 351 FVLSYVQKARKESFNVRTGARIHTLMTNSMLIFVKNPTVGKTIALEADSSDTIENVKAMI 410

Query: 316 FDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFID--PS 373
            DK     + Q ++FAGK+L     ++ YN++K ST+ ++     R+++   I +     
Sbjct: 411 HDKEGVAPNQQRLIFAGKQLDSRRTVSDYNMRKGSTVFLIF----RVLDGMQISVKTLSG 466

Query: 374 ISLSISISEVKEMAKVKFQAAVKE-LLVDQVA-------LQDDRTLADYGMDLSEKVVLV 425
            ++++ +  +  +  +K +   KE    DQ         L++DRTL DY +  +  + LV
Sbjct: 467 KTITLEVKPLDTIGSIKTKIQAKEGTPPDQQCVKFADDELEEDRTLLDYNIQWNSTLQLV 526



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 119/406 (29%), Positives = 200/406 (49%), Gaps = 30/406 (7%)

Query: 36  LEAGRLVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVK 95
           ++  R   + +R  + +H L  N   M +FVK PT      +EA    T++N+K MI  K
Sbjct: 356 VQKARKESFNVRTGARIHTLMTN--SMLIFVKNPTVGKTIALEADSSDTIENVKAMIHDK 413

Query: 96  EGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLE 155
           EG+  +Q  L++ GK L +   T++  N++  S + L+F   + + I VK  +G+ + LE
Sbjct: 414 EGVAPNQQRLIFAGKQL-DSRRTVSDYNMRKGSTVFLIFRVLDGMQISVKTLSGKTITLE 472

Query: 156 VKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEMFPSSIQI 215
           VK    I  +K  + +  G       + +   +LE+ +TL  Y+++    L++     QI
Sbjct: 473 VKPLDTIGSIKTKIQAKEGTPPDQQCVKFADDELEEDRTLLDYNIQWNSTLQLV-GRFQI 531

Query: 216 FV-RTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIK 274
           FV R    E   LEV+    ++DVKE   +   ++  +Q L +AG  L+    L+  GI+
Sbjct: 532 FVKRALTRETTPLEVKSSDTIKDVKEKYQDKEGVAPAHQRLIFAGKLLQDGCVLSDCGIQ 591

Query: 275 NNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV-F 330
               L +   LP   QIFVK++ GKTIT+  +P +T+  V+ K+ D     +   SI+ F
Sbjct: 592 KESTLHLVIRLPG-MQIFVKSFTGKTITIKAKPSDTIGRVREKIRDV--EGISPDSILKF 648

Query: 331 AGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFI----DPSISLSISISEVKEM 386
           AGK L +  +L+ YNIQ   TLH++     R  +   IF+      +++L     +  E 
Sbjct: 649 AGKELEDGRLLSDYNIQGEDTLHLI-----RYFQ---IFVRSMRGKTVTLEAEPFDTVEN 700

Query: 387 AKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
            K K          ++ L+     L D RTL+DY +  +  + LV+
Sbjct: 701 VKAKIHDKEGCPPDLQRLIFAGKQLVDGRTLSDYSIPNNSTLHLVY 746



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 84/236 (35%), Positives = 135/236 (57%), Gaps = 12/236 (5%)

Query: 138 EILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGV---SAA----DHIMIYEGKKLE 190
           + +  ++K  TG+ + LEV+ S  I +VKA +    G    SA+       +I+ GK+LE
Sbjct: 44  DTMQTYLKTLTGKTITLEVESSDTIDNVKAKIQDKEGTDIPSASLPPDQQRLIFAGKQLE 103

Query: 191 DSKTLAFYDMKDECLLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSL 250
           D +TL+ Y ++ E  L +    +QIFV+T   + + LEVE    + +VK  + +   +  
Sbjct: 104 DGRTLSDYSIQKESTLHL--GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPP 161

Query: 251 GNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNT 307
             Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T
Sbjct: 162 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 221

Query: 308 VQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRII 363
           + + K K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V + +++++
Sbjct: 222 IDNSKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVWSDATQVV 277



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 134/473 (28%), Positives = 222/473 (46%), Gaps = 61/473 (12%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +  + 
Sbjct: 214 LEVESSDTIDNSKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVWSDA 273

Query: 60  SEMKLFVKIPTNQTATVV--EAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKE--- 114
           +++   + + +   A     EA  +     ++  +   E  +   +T +  G+L  +   
Sbjct: 274 TQVVCIMIVKSIPDAMFFEWEATSWFRPGGVEPFVDCLEQARMRIWTGMLPGRLQADRGS 333

Query: 115 -----------------------DTATMTSMNIKSESIIHLVFCPKEILSIFVKAAT-GE 150
                                    A   S N+++ + IH +      + IFVK  T G+
Sbjct: 334 PLDHPSEAVYRANLRQSFVLSYVQKARKESFNVRTGARIHTLMT--NSMLIFVKNPTVGK 391

Query: 151 IVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDEC---LLE 207
            + LE   S  I +VKA++    GV+     +I+ GK+L+  +T++ Y+M+      L+ 
Sbjct: 392 TIALEADSSDTIENVKAMIHDKEGVAPNQQRLIFAGKQLDSRRTVSDYNMRKGSTVFLIF 451

Query: 208 MFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKT 267
                +QI V+T   + + LEV+ L  +  +K  +          Q + +A  +LE  +T
Sbjct: 452 RVLDGMQISVKTLSGKTITLEVKPLDTIGSIKTKIQAKEGTPPDQQCVKFADDELEEDRT 511

Query: 268 LASYGIKNNYVLDVLPSPFQIFVK-TWGGKTITLDVQPYNTVQDVKVKLFDKLQ-TPLHL 325
           L  Y I+ N  L ++   FQIFVK     +T  L+V+  +T++DVK K  DK    P H 
Sbjct: 512 LLDYNIQWNSTLQLV-GRFQIFVKRALTRETTPLEVKSSDTIKDVKEKYQDKEGVAPAH- 569

Query: 326 QSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLI------FIDPSISL--- 376
           Q ++FAGK L +  VL+   IQK STLH+V       I LP +      F   +I++   
Sbjct: 570 QRLIFAGKLLQDGCVLSDCGIQKESTLHLV-------IRLPGMQIFVKSFTGKTITIKAK 622

Query: 377 -SISISEVKEMAKVKFQAAVKELLVDQVA---LQDDRTLADYGMDLSEKVVLV 425
            S +I  V+E  K++    +    + + A   L+D R L+DY +   + + L+
Sbjct: 623 PSDTIGRVRE--KIRDVEGISPDSILKFAGKELEDGRLLSDYNIQGEDTLHLI 673



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/228 (33%), Positives = 119/228 (52%), Gaps = 15/228 (6%)

Query: 212 SIQIFVRTPIEEIVRLEVEVLIVVRDVKEIV-----ANIIDLSL--GNQDLFYAGTKLEA 264
           ++Q +++T   + + LEVE    + +VK  +      +I   SL    Q L +AG +LE 
Sbjct: 45  TMQTYLKTLTGKTITLEVESSDTIDNVKAKIQDKEGTDIPSASLPPDQQRLIFAGKQLED 104

Query: 265 CKTLASYGIKNNYVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLH 324
            +TL+ Y I+    L +     QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P  
Sbjct: 105 GRTLSDYSIQKESTLHL--GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD 162

Query: 325 LQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVK 384
            Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  
Sbjct: 163 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 222

Query: 385 EMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           + +K K Q         + L+     L+D RTL+DY +     + LV+
Sbjct: 223 DNSKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVW 270



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 76/232 (32%), Positives = 118/232 (50%), Gaps = 17/232 (7%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++VK S+ IK++K     KEG++     L FAG  L+ G  L D GI+  STLH + + L
Sbjct: 544 LEVKSSDTIKDVKEKYQDKEGVAPAHQRLIFAGKLLQDGCVLSDCGIQKESTLHLVIR-L 602

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ +A P  T+  ++  I+  EGI  D   L + GK L ED   +
Sbjct: 603 PGMQIFVKSFTGKTITI-KAKPSDTIGRVREKIRDVEGISPDSI-LKFAGKEL-EDGRLL 659

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ E  +HL+        IFV++  G+ V LE +    + +VKA +    G     
Sbjct: 660 SDYNIQGEDTLHLI----RYFQIFVRSMRGKTVTLEAEPFDTVENVKAKIHDKEGCPPDL 715

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEMF--------PSSIQIFVRTPIEE 223
             +I+ GK+L D +TL+ Y + +   L +         PSS    VR  + E
Sbjct: 716 QRLIFAGKQLVDGRTLSDYSIPNNSTLHLVYRSIGGTRPSSTFFQVRGSVRE 767



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 79/162 (48%), Gaps = 26/162 (16%)

Query: 282 LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQT-------PLHLQSIVFAGKR 334
           L    Q ++KT  GKTITL+V+  +T+ +VK K+ DK  T       P   Q ++FAGK+
Sbjct: 42  LADTMQTYLKTLTGKTITLEVESSDTIDNVKAKIQDKEGTDIPSASLPPDQQRLIFAGKQ 101

Query: 335 LFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFI----DPSISLSISISEVKEMAKVK 390
           L +   L+ Y+IQK STLH+             IF+      +I+L +  S+  +  K K
Sbjct: 102 LEDGRTLSDYSIQKESTLHLGGM---------QIFVKTLTGKTITLEVESSDTIDNVKAK 152

Query: 391 FQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
            Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 153 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 194


>gi|307108562|gb|EFN56802.1| hypothetical protein CHLNCDRAFT_51574 [Chlorella variabilis]
          Length = 979

 Score =  187 bits (476), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 124/336 (36%), Positives = 180/336 (53%), Gaps = 39/336 (11%)

Query: 58  NLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKE--------------------- 96
           N++ M++FVK  T +T T+ E     T++N+K  IQ KE                     
Sbjct: 640 NVASMQIFVKTLTGKTITL-EVESSDTIENVKAKIQDKEDQTCLPVRIKLVWSLCRWYVL 698

Query: 97  ----------GIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKA 146
                     GI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +  + IFVK 
Sbjct: 699 STLPNPAAAAGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKT 757

Query: 147 ATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLL 206
            TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+++ E  L
Sbjct: 758 LTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 817

Query: 207 EM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLE 263
            +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE
Sbjct: 818 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 877

Query: 264 ACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQ 320
             +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK K+ DK  
Sbjct: 878 DGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEG 937

Query: 321 TPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
            P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 938 IPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 973



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 102/263 (38%), Positives = 147/263 (55%), Gaps = 6/263 (2%)

Query: 21  GISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEA 79
           GI  D   L FAG +LE GR L DY I+  STLH + +    M++FVK  T +T T +E 
Sbjct: 709 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT-LEV 767

Query: 80  MPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEI 139
               T++N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +  
Sbjct: 768 ESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGG 826

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 827 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 886

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 887 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLI 946

Query: 257 YAGTKLEACKTLASYGIKNNYVL 279
           +AG +LE  +TLA Y I+    L
Sbjct: 947 FAGKQLEDGRTLADYNIQKESTL 969



 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 108/330 (32%), Positives = 160/330 (48%), Gaps = 43/330 (13%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIV------------------------------ 169
           + IFVK  TG+ + LEV+ S  I +VKA +                              
Sbjct: 644 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEDQTCLPVRIKLVWSLCRWYVLSTLPN 703

Query: 170 -GSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIV 225
             +  G+      +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + +
Sbjct: 704 PAAAAGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 763

Query: 226 RLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---L 282
            LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L
Sbjct: 764 TLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 823

Query: 283 PSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLA 342
               QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   LA
Sbjct: 824 RGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 883

Query: 343 RYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVK 396
            YNIQK STLH+VL     +          +I+L +  S+  E  K K Q         +
Sbjct: 884 DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQ 943

Query: 397 ELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
            L+     L+D RTLADY +     + LV 
Sbjct: 944 RLIFAGKQLEDGRTLADYNIQKESTLHLVL 973



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 126/209 (60%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 85  LEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 144

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 145 GGMQIFVKTLTGKTITL-EVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 202

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 203 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQ 262

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 263 QRLIFAGKQLEDGRTLADYNIQKESTLHL 291



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 126/209 (60%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 765 LEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 824

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 825 GGMQIFVKTLTGKTIT-LEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 882

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 883 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQ 942

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 943 QRLIFAGKQLEDGRTLADYNIQKESTLHL 971



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 92/249 (36%), Positives = 136/249 (54%), Gaps = 20/249 (8%)

Query: 133 VFCPKEIL-----------SIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
           V CP ++L           +   K   G+ + LEV+ S  I +VKA +    G+      
Sbjct: 53  VVCPLDVLKTRLQVQGKAGAAMYKGVGGKTITLEVESSDTIENVKAKIQDKEGIPPDQQR 112

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 113 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENV 172

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 173 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 232

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+ 
Sbjct: 233 KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLD 292

Query: 356 LAPSSRIIE 364
           L    RI+E
Sbjct: 293 L---HRIVE 298



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/199 (37%), Positives = 112/199 (56%), Gaps = 4/199 (2%)

Query: 84  TVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIF 143
           T++N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +  + IF
Sbjct: 92  TIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIF 150

Query: 144 VKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDE 203
           VK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+++ E
Sbjct: 151 VKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 210

Query: 204 CLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGT 260
             L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG 
Sbjct: 211 STLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGK 270

Query: 261 KLEACKTLASYGIKNNYVL 279
           +LE  +TLA Y I+    L
Sbjct: 271 QLEDGRTLADYNIQKESTL 289



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/199 (37%), Positives = 105/199 (52%), Gaps = 9/199 (4%)

Query: 225 VRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV--- 281
           + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   
Sbjct: 83  ITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 142

Query: 282 LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVL 341
           L    QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L
Sbjct: 143 LRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 202

Query: 342 ARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAV 395
           A YNIQK STLH+VL     +          +I+L +  S+  E  K K Q         
Sbjct: 203 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQ 262

Query: 396 KELLVDQVALQDDRTLADY 414
           + L+     L+D RTLADY
Sbjct: 263 QRLIFAGKQLEDGRTLADY 281



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 82/161 (50%), Gaps = 13/161 (8%)

Query: 279 LDVLPSPFQI-------FVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFA 331
           LDVL +  Q+         K  GGKTITL+V+  +T+++VK K+ DK   P   Q ++FA
Sbjct: 57  LDVLKTRLQVQGKAGAAMYKGVGGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFA 116

Query: 332 GKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKF 391
           GK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  E  K K 
Sbjct: 117 GKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKI 176

Query: 392 Q------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           Q         + L+     L+D RTLADY +     + LV 
Sbjct: 177 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 217


>gi|281212331|gb|EFA86491.1| hypothetical protein PPL_00285 [Polysphondylium pallidum PN500]
          Length = 1074

 Score =  187 bits (475), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 123/323 (38%), Positives = 183/323 (56%), Gaps = 22/323 (6%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEMFPSSIQIFVRTPIEEIVRLE-VEVLIVVRDV 238
             +I+ GK+LED +TL+ Y+++ E  L +               ++RL  VE    + +V
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL---------------VLRLRGVEGSDTIENV 237

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 238 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 297

Query: 296 KTITLDVQPYNTVQDVKVKLFDK 318
           KTITL+V+  +T+++VK K+ DK
Sbjct: 298 KTITLEVEGSDTIENVKTKIQDK 320



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 115/334 (34%), Positives = 179/334 (53%), Gaps = 19/334 (5%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+KT IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVLPSPFQIFVKTWGGKTI 298
           K  + +   +    Q L +AG +LE  +TL+ Y I+         S   + ++  G    
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK-------ESTLHLVLRLRG---- 227

Query: 299 TLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAP 358
              V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL  
Sbjct: 228 ---VEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 284

Query: 359 SSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ 392
              +          +I+L +  S+  E  K K Q
Sbjct: 285 RGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQ 318



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/287 (34%), Positives = 156/287 (54%), Gaps = 25/287 (8%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKT 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL    R+           
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL----RL---------RG 227

Query: 374 ISLSISISEVKEMAKVKFQAAV----KELLVDQVALQDDRTLADYGM 416
           +  S +I  VK   K++ +  +    + L+     L+D RTL+DY +
Sbjct: 228 VEGSDTIENVK--TKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 272



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 2/95 (2%)

Query: 3   VKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSE 61
           V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +    
Sbjct: 228 VEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 287

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKE 96
           M++FVK  T +T T+ E     T++N+KT IQ KE
Sbjct: 288 MQIFVKTLTGKTITL-EVEGSDTIENVKTKIQDKE 321


>gi|302393784|sp|P69315.2|UBIQP_LINUS RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Contains: RecName: Full=Ubiquitin-related; Flags:
           Precursor
 gi|168304|gb|AAA33401.1| ubiquitin, partial [Linum usitatissimum]
          Length = 305

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 120/304 (39%), Positives = 172/304 (56%), Gaps = 9/304 (2%)

Query: 22  ISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAM 80
           I  D   L FAG +LE GR L DY I+  STLH + +    M++F+K  T +T T+ E  
Sbjct: 1   IPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFLKTLTGKTITL-EVE 59

Query: 81  PYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEIL 140
              T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +  +
Sbjct: 60  SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGM 118

Query: 141 SIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDM 200
            IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y++
Sbjct: 119 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 178

Query: 201 KDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFY 257
           + E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L +
Sbjct: 179 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 238

Query: 258 AGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVK 314
           AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K
Sbjct: 239 AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK 298

Query: 315 LFDK 318
           + DK
Sbjct: 299 IQDK 302



 Score =  177 bits (450), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 112/301 (37%), Positives = 165/301 (54%), Gaps = 7/301 (2%)

Query: 98  IQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVK 157
           I  DQ  L++ GK L ED  T+   NI+ ES +HLV   +  + IF+K  TG+ + LEV+
Sbjct: 1   IPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFLKTLTGKTITLEVE 59

Query: 158 HSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQ 214
            S  I +VKA +    G+      +I+ GK+LED +TLA Y+++ E  L +       +Q
Sbjct: 60  SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQ 119

Query: 215 IFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIK 274
           IFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y I+
Sbjct: 120 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 179

Query: 275 NNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFA 331
               L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FA
Sbjct: 180 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 239

Query: 332 GKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKF 391
           GK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +  K K 
Sbjct: 240 GKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 299

Query: 392 Q 392
           Q
Sbjct: 300 Q 300



 Score =  157 bits (398), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 99/243 (40%), Positives = 141/243 (58%), Gaps = 6/243 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 56  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 115

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 116 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 173

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 174 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 233

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 234 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 293

Query: 237 DVK 239
           +VK
Sbjct: 294 NVK 296



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 91/257 (35%), Positives = 136/257 (52%), Gaps = 12/257 (4%)

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIF++T   + + LEVE    + +V
Sbjct: 8   LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFLKTLTGKTITLEVESSDTIDNV 67

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 68  KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 127

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 128 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 187

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 188 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 247

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 248 TLADYNIQKESTLHLVL 264



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 76/176 (43%), Positives = 104/176 (59%), Gaps = 3/176 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 132 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 191

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 192 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 249

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGV 175
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+
Sbjct: 250 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGI 305


>gi|393218664|gb|EJD04152.1| polyubiquitin [Fomitiporia mediterranea MF3/22]
          Length = 321

 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/299 (38%), Positives = 169/299 (56%), Gaps = 8/299 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+  +K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDTVKNKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I  VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDTVKNKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    +  V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDTV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHM 354
           KTITL+V+  +T+  VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+
Sbjct: 239 KTITLEVESSDTIDTVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 105/283 (37%), Positives = 155/283 (54%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I  +K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDTVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+  +K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDTVKNKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I  VK  +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDTVKNKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
            VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 TVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 100/287 (34%), Positives = 150/287 (52%), Gaps = 12/287 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I  VK  +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDTVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    +  VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDTVKNKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+  VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDTVKN 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADY 414
           I+L +  S+  +  K K Q         + L+     L+D RTL+DY
Sbjct: 241 ITLEVESSDTIDTVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 287



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 77/223 (34%), Positives = 114/223 (51%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    +  VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDTVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+  VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDTVKNKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDTVKN 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 46.6 bits (109), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 33/55 (60%), Gaps = 1/55 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHF 54
           ++V+ S+ I  +K  I  KEGI  D   L FAG +LE GR L DY I+  STLH 
Sbjct: 243 LEVESSDTIDTVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297


>gi|307006571|gb|ADN23570.1| ubiquitin [Hyalomma marginatum rufipes]
          Length = 275

 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/270 (40%), Positives = 159/270 (58%), Gaps = 7/270 (2%)

Query: 93  QVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIV 152
           Q KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV   +  + IFVK  TG+ +
Sbjct: 1   QDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 59

Query: 153 NLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---F 209
            LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+++ E  L +    
Sbjct: 60  TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 119

Query: 210 PSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLA 269
              +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+
Sbjct: 120 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 179

Query: 270 SYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQ 326
            Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q
Sbjct: 180 DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 239

Query: 327 SIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
            ++FAGK+L +   L  YNIQK STLH+VL
Sbjct: 240 RLIFAGKQLEDGRTLPDYNIQKESTLHLVL 269



 Score =  167 bits (423), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 103/265 (38%), Positives = 150/265 (56%), Gaps = 6/265 (2%)

Query: 19  KEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVV 77
           KEGI  D   L FAG +LE GR L DY I+  STLH + +    M++FVK  T +T T +
Sbjct: 3   KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT-L 61

Query: 78  EAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPK 137
           E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV   +
Sbjct: 62  EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLR 120

Query: 138 EILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAF 197
             + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ 
Sbjct: 121 GGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 180

Query: 198 YDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQD 254
           Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q 
Sbjct: 181 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 240

Query: 255 LFYAGTKLEACKTLASYGIKNNYVL 279
           L +AG +LE  +TL  Y I+    L
Sbjct: 241 LIFAGKQLEDGRTLPDYNIQKESTL 265



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 127/209 (60%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 61  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 120

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 121 GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 178

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 179 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 238

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL  Y+++ E  L +
Sbjct: 239 QRLIFAGKQLEDGRTLPDYNIQKESTLHL 267



 Score =  141 bits (355), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 91/265 (34%), Positives = 139/265 (52%), Gaps = 12/265 (4%)

Query: 174 GVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVE 230
           G+      +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE
Sbjct: 5   GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 64

Query: 231 VLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQ 287
               + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    Q
Sbjct: 65  PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 124

Query: 288 IFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQ 347
           IFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQ
Sbjct: 125 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 184

Query: 348 KHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVD 401
           K STLH+VL     +          +I+L +  S+  E  K K Q         + L+  
Sbjct: 185 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 244

Query: 402 QVALQDDRTLADYGMDLSEKVVLVF 426
              L+D RTL DY +     + LV 
Sbjct: 245 GKQLEDGRTLPDYNIQKESTLHLVL 269


>gi|118370588|ref|XP_001018495.1| Ubiquitin family protein [Tetrahymena thermophila]
 gi|89300262|gb|EAR98250.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
          Length = 854

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/294 (39%), Positives = 174/294 (59%), Gaps = 10/294 (3%)

Query: 70  TNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSES 128
           T +T T+ VEA    +++N+K  IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES
Sbjct: 559 TGKTITLDVEAS--DSIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKES 615

Query: 129 IIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKK 188
            +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+      +I+ GK+
Sbjct: 616 TLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQ 675

Query: 189 LEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANI 245
           LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + +VK  + + 
Sbjct: 676 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDK 735

Query: 246 IDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDV 302
             +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITLDV
Sbjct: 736 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDV 795

Query: 303 QPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           +  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 796 EASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 849



 Score =  167 bits (423), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 108/279 (38%), Positives = 163/279 (58%), Gaps = 8/279 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 565 LDVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 624

Query: 60  SEMKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
             M++FVK  T +T T+ VEA    T++N+K  IQ KEGI  DQ  L++ GK L ED  T
Sbjct: 625 GGMQIFVKTLTGKTITLDVEAS--DTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 681

Query: 119 MTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAA 178
           ++  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+   
Sbjct: 682 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPD 741

Query: 179 DHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVV 235
              +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    +
Sbjct: 742 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTI 801

Query: 236 RDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIK 274
            +VK  + +   +    Q L +AG +LE  +TL+ Y I+
Sbjct: 802 ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 840



 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 99/291 (34%), Positives = 155/291 (53%), Gaps = 12/291 (4%)

Query: 148 TGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLE 207
           TG+ + L+V+ S +I +VKA +    G+      +I+ GK+LED +TL+ Y+++ E  L 
Sbjct: 559 TGKTITLDVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 618

Query: 208 M---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEA 264
           +       +QIFV+T   + + L+VE    + +VK  + +   +    Q L +AG +LE 
Sbjct: 619 LVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 678

Query: 265 CKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQT 321
            +TL+ Y I+    L +   L    QIFVKT  GKTITLDV+  +T+++VK K+ DK   
Sbjct: 679 GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGI 738

Query: 322 PLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISIS 381
           P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S
Sbjct: 739 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEAS 798

Query: 382 EVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           +  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 799 DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 849



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 80/252 (31%), Positives = 124/252 (49%), Gaps = 9/252 (3%)

Query: 184 YEGKKLEDSKTLAFYDMKDECLLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVA 243
           YE   +   + L   D+  + +  +   SI+    T   + + L+VE    + +VK  + 
Sbjct: 522 YENITIAGEENLRQLDLNKQYMFGIEYYSIEKIKITLTGKTITLDVEASDSIENVKAKIQ 581

Query: 244 NIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITL 300
           +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL
Sbjct: 582 DKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL 641

Query: 301 DVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSS 360
           DV+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL    
Sbjct: 642 DVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 701

Query: 361 RIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADY 414
            +          +I+L +  S+  E  K K Q         + L+     L+D RTL+DY
Sbjct: 702 GMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 761

Query: 415 GMDLSEKVVLVF 426
            +     + LV 
Sbjct: 762 NIQKESTLHLVL 773


>gi|413926507|gb|AFW66439.1| putative ubiquitin family protein [Zea mays]
          Length = 297

 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 119/301 (39%), Positives = 169/301 (56%), Gaps = 16/301 (5%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +        + DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSD--------IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 290

Query: 356 L 356
           L
Sbjct: 291 L 291



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 111/283 (39%), Positives = 159/283 (56%), Gaps = 14/283 (4%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    ++
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVES-SDIQ 251

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           D + I  +        Q L +AG +LE  +TLA Y I+    L
Sbjct: 252 DKEGIPPD-------QQRLIFAGKQLEDGRTLADYNIQKESTL 287



 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 105/293 (35%), Positives = 158/293 (53%), Gaps = 8/293 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQAAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S++++  K       + L+     L+D RTLADY +     + LV 
Sbjct: 241 ITLEVESSDIQD--KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 291


>gi|27734398|gb|AAM51223.1| polyubiquitin [Bigelowiella natans]
 gi|27734402|gb|AAM51224.1| polyubiquitin [Bigelowiella natans]
          Length = 306

 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 119/304 (39%), Positives = 172/304 (56%), Gaps = 11/304 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +     T+  +K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 3   MQIFVKTLTGKTITL-DVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 60

Query: 122 MNIKSESIIHLVFCPKE-ILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADH 180
            NI+ ES +HLV   +   + IFVK  TG+ + L+V  S  I  VK  +    G+     
Sbjct: 61  YNIQKESTLHLVLRLRGGSMQIFVKTLTGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQ 120

Query: 181 IMIYEGKKLEDSKTLAFYDMKDEC----LLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
            +I+ GK+LED +TLA Y+++ E     +L +   S+QIFV+T   + + L+V+    + 
Sbjct: 121 RLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGSMQIFVKTLTGKTITLDVDSSDTIN 180

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKN----NYVLDVLPSPFQIFVKT 292
            VK+ + +   +    Q L +AG +LE  +TLA Y I+     + VL +     QIFVKT
Sbjct: 181 TVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGSMQIFVKT 240

Query: 293 WGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTL 352
             GKTITLDV   +T+  VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STL
Sbjct: 241 LTGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 300

Query: 353 HMVL 356
           H+VL
Sbjct: 301 HLVL 304



 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 105/286 (36%), Positives = 153/286 (53%), Gaps = 9/286 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHF-LHQN 58
           + V  S+ I  +K  I  KEGI  D   L FAG +LE GR L DY I+  STLH  L   
Sbjct: 17  LDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 76

Query: 59  LSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
              M++FVK  T +T T ++     T+  +K  IQ KEGI  DQ  L++ GK L ED  T
Sbjct: 77  GGSMQIFVKTLTGKTIT-LDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRT 134

Query: 119 MTSMNIKSESIIHLVFCPK-EILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSA 177
           +   NI+ ES +HLV   +   + IFVK  TG+ + L+V  S  I  VK  +    G+  
Sbjct: 135 LADYNIQKESTLHLVLRLRGGSMQIFVKTLTGKTITLDVDSSDTINTVKQKIQDKEGIPP 194

Query: 178 ADHIMIYEGKKLEDSKTLAFYDMKDEC----LLEMFPSSIQIFVRTPIEEIVRLEVEVLI 233
               +I+ GK+LED +TLA Y+++ E     +L +   S+QIFV+T   + + L+V+   
Sbjct: 195 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGSMQIFVKTLTGKTITLDVDSSD 254

Query: 234 VVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
            +  VK+ + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 255 TINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 300



 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 105/302 (34%), Positives = 158/302 (52%), Gaps = 15/302 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + L+V  S  I  VK  +    G+      +I+ GK+LED +TLA Y+
Sbjct: 3   MQIFVKTLTGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 62

Query: 200 MKDEC----LLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDL 255
           ++ E     +L +   S+QIFV+T   + + L+V+    +  VK+ + +   +    Q L
Sbjct: 63  IQKESTLHLVLRLRGGSMQIFVKTLTGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRL 122

Query: 256 FYAGTKLEACKTLASYGIKN----NYVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDV 311
            +AG +LE  +TLA Y I+     + VL +     QIFVKT  GKTITLDV   +T+  V
Sbjct: 123 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGSMQIFVKTLTGKTITLDVDSSDTINTV 182

Query: 312 KVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPL-IFI 370
           K K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL      +++ +    
Sbjct: 183 KQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGSMQIFVKTLT 242

Query: 371 DPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVL 424
             +I+L +  S+     K K Q         + L+     L+D RTLADY +     + L
Sbjct: 243 GKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 302

Query: 425 VF 426
           V 
Sbjct: 303 VL 304



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 80/226 (35%), Positives = 118/226 (52%), Gaps = 11/226 (4%)

Query: 212 SIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASY 271
           S+QIFV+T   + + L+V+    +  VK+ + +   +    Q L +AG +LE  +TLA Y
Sbjct: 2   SMQIFVKTLTGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 61

Query: 272 GIKN----NYVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQS 327
            I+     + VL +     QIFVKT  GKTITLDV   +T+  VK K+ DK   P   Q 
Sbjct: 62  NIQKESTLHLVLRLRGGSMQIFVKTLTGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQR 121

Query: 328 IVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPL-IFIDPSISLSISISEVKEM 386
           ++FAGK+L +   LA YNIQK STLH+VL      +++ +      +I+L +  S+    
Sbjct: 122 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGSMQIFVKTLTGKTITLDVDSSDTINT 181

Query: 387 AKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
            K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 182 VKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 227


>gi|27734407|gb|AAM51225.1| polyubiquitin [Bigelowiella natans]
          Length = 320

 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 119/304 (39%), Positives = 172/304 (56%), Gaps = 11/304 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +     T+  +K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 3   MQIFVKTLTGKTITL-DVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 60

Query: 122 MNIKSESIIHLVFCPKE-ILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADH 180
            NI+ ES +HLV   +   + IFVK  TG+ + L+V  S  I  VK  +    G+     
Sbjct: 61  YNIQKESTLHLVLRLRGGSMQIFVKTLTGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQ 120

Query: 181 IMIYEGKKLEDSKTLAFYDMKDEC----LLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
            +I+ GK+LED +TLA Y+++ E     +L +   S+QIFV+T   + + L+V+    + 
Sbjct: 121 RLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGSMQIFVKTLTGKTITLDVDSSDTIN 180

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKN----NYVLDVLPSPFQIFVKT 292
            VK+ + +   +    Q L +AG +LE  +TLA Y I+     + VL +     QIFVKT
Sbjct: 181 TVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGSMQIFVKT 240

Query: 293 WGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTL 352
             GKTITLDV   +T+  VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STL
Sbjct: 241 LTGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 300

Query: 353 HMVL 356
           H+VL
Sbjct: 301 HLVL 304



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/303 (36%), Positives = 162/303 (53%), Gaps = 13/303 (4%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHF-LHQN 58
           + V  S+ I  +K  I  KEGI  D   L FAG +LE GR L DY I+  STLH  L   
Sbjct: 17  LDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 76

Query: 59  LSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
              M++FVK  T +T T ++     T+  +K  IQ KEGI  DQ  L++ GK L ED  T
Sbjct: 77  GGSMQIFVKTLTGKTIT-LDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRT 134

Query: 119 MTSMNIKSESIIHLVFCPK-EILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSA 177
           +   NI+ ES +HLV   +   + IFVK  TG+ + L+V  S  I  VK  +    G+  
Sbjct: 135 LADYNIQKESTLHLVLRLRGGSMQIFVKTLTGKTITLDVDSSDTINTVKQKIQDKEGIPP 194

Query: 178 ADHIMIYEGKKLEDSKTLAFYDMKDEC----LLEMFPSSIQIFVRTPIEEIVRLEVEVLI 233
               +I+ GK+LED +TLA Y+++ E     +L +   S+QIFV+T   + + L+V+   
Sbjct: 195 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGSMQIFVKTLTGKTITLDVDSSD 254

Query: 234 VVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKN----NYVLDVLPSPFQIF 289
            +  VK+ + +   +    Q L +AG +LE  +TLA Y I+     + VL +     QIF
Sbjct: 255 TINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGSMQIF 314

Query: 290 VKT 292
           VKT
Sbjct: 315 VKT 317



 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 105/302 (34%), Positives = 158/302 (52%), Gaps = 15/302 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + L+V  S  I  VK  +    G+      +I+ GK+LED +TLA Y+
Sbjct: 3   MQIFVKTLTGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 62

Query: 200 MKDEC----LLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDL 255
           ++ E     +L +   S+QIFV+T   + + L+V+    +  VK+ + +   +    Q L
Sbjct: 63  IQKESTLHLVLRLRGGSMQIFVKTLTGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRL 122

Query: 256 FYAGTKLEACKTLASYGIKN----NYVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDV 311
            +AG +LE  +TLA Y I+     + VL +     QIFVKT  GKTITLDV   +T+  V
Sbjct: 123 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGSMQIFVKTLTGKTITLDVDSSDTINTV 182

Query: 312 KVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPL-IFI 370
           K K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL      +++ +    
Sbjct: 183 KQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGSMQIFVKTLT 242

Query: 371 DPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVL 424
             +I+L +  S+     K K Q         + L+     L+D RTLADY +     + L
Sbjct: 243 GKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 302

Query: 425 VF 426
           V 
Sbjct: 303 VL 304



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 80/226 (35%), Positives = 118/226 (52%), Gaps = 11/226 (4%)

Query: 212 SIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASY 271
           S+QIFV+T   + + L+V+    +  VK+ + +   +    Q L +AG +LE  +TLA Y
Sbjct: 2   SMQIFVKTLTGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 61

Query: 272 GIKN----NYVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQS 327
            I+     + VL +     QIFVKT  GKTITLDV   +T+  VK K+ DK   P   Q 
Sbjct: 62  NIQKESTLHLVLRLRGGSMQIFVKTLTGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQR 121

Query: 328 IVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPL-IFIDPSISLSISISEVKEM 386
           ++FAGK+L +   LA YNIQK STLH+VL      +++ +      +I+L +  S+    
Sbjct: 122 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGSMQIFVKTLTGKTITLDVDSSDTINT 181

Query: 387 AKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
            K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 182 VKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 227


>gi|255732802|ref|XP_002551324.1| ubiquitin [Candida tropicalis MYA-3404]
 gi|240131065|gb|EER30626.1| ubiquitin [Candida tropicalis MYA-3404]
          Length = 299

 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/297 (38%), Positives = 171/297 (57%), Gaps = 8/297 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTL 352
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNI K + L
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNISKKNLL 295



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 107/283 (37%), Positives = 162/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I    +L
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNISKKNLL 295



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 103/297 (34%), Positives = 161/297 (54%), Gaps = 14/297 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK+ +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVL 424
           I+L +  S+  +  K K Q         + L+     L+D RTL+DY  ++S+K +L
Sbjct: 241 ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--NISKKNLL 295



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/223 (34%), Positives = 116/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223


>gi|426263332|emb|CCG34086.1| Polyubiquitin [uncultured eukaryote]
          Length = 304

 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/295 (37%), Positives = 171/295 (57%), Gaps = 8/295 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    +IFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMRIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHS 350
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK +
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKRA 293



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 105/278 (37%), Positives = 161/278 (57%), Gaps = 6/278 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       ++IFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMRIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIK 274
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 100/289 (34%), Positives = 155/289 (53%), Gaps = 12/289 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK+ +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMRIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGM 416
           I+L +  S+  +  K K Q         + L+     L+D RTL+DY +
Sbjct: 241 ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 289



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/206 (40%), Positives = 124/206 (60%), Gaps = 3/206 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMRIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECL 205
             +I+ GK+LED +TL+ Y+++   L
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKRAL 294



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/223 (34%), Positives = 116/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223


>gi|145524136|ref|XP_001447898.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124415426|emb|CAK80501.1| unnamed protein product [Paramecium tetraurelia]
          Length = 637

 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 143/442 (32%), Positives = 220/442 (49%), Gaps = 34/442 (7%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGRLVDYGIRNNSTLHFLHQNLS 60
           + V+ S+ I  +KA I  KEGI  D     F  +        +Y I+  STLH + +   
Sbjct: 64  LDVEPSDTIDAVKAKIQDKEGIPPDQQKTHFLQE--------NYNIQKESTLHLVLRLRG 115

Query: 61  EMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMT 120
            M++FVK  T +T T ++  P  T+  +K  IQ KEGI  DQ  L++ GK L ED  T++
Sbjct: 116 GMQIFVKTLTGKTIT-LDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLS 173

Query: 121 SMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAI-VGSVVGVSAAD 179
             NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  +  +  + +    G+    
Sbjct: 174 DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSSTLLTLSRLQIQDKEGIPPDQ 233

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + 
Sbjct: 234 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTID 293

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVLP---SPFQIFVKTW 293
            VK   A I D     + +     K   C+ +     KN + L  L    SP    ++ W
Sbjct: 294 AVK---AKIQD----KEGIPPGLIKTHFCRKVIRR-WKNTFRLQHLKGIHSPLSFEIERW 345

Query: 294 G---GKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHS 350
               GKTITLDV+P +T+  VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK S
Sbjct: 346 NTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 405

Query: 351 TLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVA 404
           TLH+VL     +          +I+L +  S+  +  K K Q         + L+     
Sbjct: 406 TLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQ 465

Query: 405 LQDDRTLADYGMDLSEKVVLVF 426
           L+D RTL+DY +     + LV 
Sbjct: 466 LEDGRTLSDYNIQKESTLHLVL 487



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 133/366 (36%), Positives = 195/366 (53%), Gaps = 28/366 (7%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGRLVDYGIRNNSTLHFL---HQ 57
           + V+ S+ I  +KA I  KEGI   +    F        R V    +N   L  L   H 
Sbjct: 284 LDVEPSDTIDAVKAKIQDKEGIPPGLIKTHFC-------RKVIRRWKNTFRLQHLKGIHS 336

Query: 58  NLS-EMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDT 116
            LS E++ +  + T +T T+ +  P  T+  +K  IQ KEGI  DQ  L++ GK L ED 
Sbjct: 337 PLSFEIERWNTL-TGKTITL-DVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQL-EDG 393

Query: 117 ATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVS 176
            T++  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I  VKA +    G+ 
Sbjct: 394 RTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIP 453

Query: 177 AADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLI 233
                +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE   
Sbjct: 454 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSD 513

Query: 234 VVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLAS---YGIKNNYVLDVLPSPFQIFV 290
            +  VK  + +   +    Q L +AG KL+  K + S   + I+    L       QIFV
Sbjct: 514 TIDAVKAKIQDKEGIPPDQQRLIFAG-KLQHLKGIHSPLSFEIERWLRL-------QIFV 565

Query: 291 KTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHS 350
           KT  GKTITLDV+P +T+  VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK S
Sbjct: 566 KTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 625

Query: 351 TLHMVL 356
           TLH+VL
Sbjct: 626 TLHLVL 631



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 132/429 (30%), Positives = 203/429 (47%), Gaps = 32/429 (7%)

Query: 13  KAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTN 71
           +  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +    M++FVK  T 
Sbjct: 220 RLQIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 279

Query: 72  QTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIH 131
           +T T+ +  P  T+  +K  IQ KEGI        +  K+++    T    ++K      
Sbjct: 280 KTITL-DVEPSDTIDAVKAKIQDKEGIPPGLIKTHFCRKVIRRWKNTFRLQHLKG----- 333

Query: 132 LVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLED 191
            +  P           TG+ + L+V+ S  I  VKA +    G+      +I+ GK+LED
Sbjct: 334 -IHSPLSFEIERWNTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLED 392

Query: 192 SKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDL 248
            +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    +  VK  + +   +
Sbjct: 393 GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGI 452

Query: 249 SLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPY 305
               Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITLDV+P 
Sbjct: 453 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPS 512

Query: 306 NTVQDVKVKLFDKLQTPLHLQSIVFAGK--RLFENHVLARYNIQKHSTLHMVLAPSSRII 363
           +T+  VK K+ DK   P   Q ++FAGK   L   H    + I++   L + +       
Sbjct: 513 DTIDAVKAKIQDKEGIPPDQQRLIFAGKLQHLKGIHSPLSFEIERWLRLQIFVK------ 566

Query: 364 ELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMD 417
                    +I+L +  S+  +  K K Q         + L+     L+D RTL+DY + 
Sbjct: 567 ----TLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 622

Query: 418 LSEKVVLVF 426
               + LV 
Sbjct: 623 KESTLHLVL 631



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 126/391 (32%), Positives = 193/391 (49%), Gaps = 34/391 (8%)

Query: 53  HFLHQNL---SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDG 109
           +FL Q L    EM++FVK  T +T T+ +  P  T+  +K  IQ KEGI  DQ    +  
Sbjct: 38  YFLDQQLIIKYEMQIFVKTLTGKTITL-DVEPSDTIDAVKAKIQDKEGIPPDQQKTHF-- 94

Query: 110 KLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIV 169
             L+E+       NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I  VKA +
Sbjct: 95  --LQEN------YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKI 146

Query: 170 GSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVR 226
               G+      +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + 
Sbjct: 147 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 206

Query: 227 LEVEVLIVVRDVKEI-VANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---L 282
           L+VE    +  +  + + +   +    Q L +AG +LE  +TL+ Y I+    L +   L
Sbjct: 207 LDVEPSSTLLTLSRLQIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 266

Query: 283 PSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLA 342
               QIFVKT  GKTITLDV+P +T+  VK K+ DK   P  L    F  K      V+ 
Sbjct: 267 RGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPGLIKTHFCRK------VIR 320

Query: 343 RY-NIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAV 395
           R+ N  +   L  + +P S  IE        +I+L +  S+  +  K K Q         
Sbjct: 321 RWKNTFRLQHLKGIHSPLSFEIERWNTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQ 380

Query: 396 KELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           + L+     L+D RTL+DY +     + LV 
Sbjct: 381 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 411


>gi|424513675|emb|CCO66297.1| polyubiquitin [Bathycoccus prasinos]
          Length = 359

 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/266 (40%), Positives = 154/266 (57%), Gaps = 7/266 (2%)

Query: 97  GIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEV 156
           GI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +  + IFVK  TG+ + LEV
Sbjct: 86  GIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 144

Query: 157 KHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSI 213
           + S  I +VKA +    G+      +I+ GK+LED +TLA Y+++ E  L +       +
Sbjct: 145 ESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 204

Query: 214 QIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGI 273
           QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y I
Sbjct: 205 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 264

Query: 274 KNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVF 330
           +    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++F
Sbjct: 265 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 324

Query: 331 AGKRLFENHVLARYNIQKHSTLHMVL 356
           AGK+L +   LA YNIQK STLH+VL
Sbjct: 325 AGKQLEDGRTLADYNIQKESTLHLVL 350



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/263 (38%), Positives = 146/263 (55%), Gaps = 6/263 (2%)

Query: 21  GISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEA 79
           GI  D   L FAG +LE GR L DY I+  STLH + +    M++FVK  T +T T +E 
Sbjct: 86  GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT-LEV 144

Query: 80  MPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEI 139
               T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +  
Sbjct: 145 ESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGG 203

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 204 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 263

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 264 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 323

Query: 257 YAGTKLEACKTLASYGIKNNYVL 279
           +AG +LE  +TLA Y I+    L
Sbjct: 324 FAGKQLEDGRTLADYNIQKESTL 346



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 122/380 (32%), Positives = 183/380 (48%), Gaps = 45/380 (11%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEG                       +
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEG-----------------------T 36

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEI-VNLEVKHSFAIRDVK--AIVGSVVGVSAA 178
             +KS     L FC   +L++   A T E  + L  K S   R+ +  + +    G+   
Sbjct: 37  FRVKSR---RLKFC---LLALLDSATTIESSLALRSKKSSERREREKESALSRARGIPPD 90

Query: 179 DHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVV 235
              +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    +
Sbjct: 91  QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 150

Query: 236 RDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKT 292
            +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT
Sbjct: 151 DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKT 210

Query: 293 WGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTL 352
             GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STL
Sbjct: 211 LTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 270

Query: 353 HMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQ 406
           H+VL     +          +I+L +  S+  +  K K Q         + L+     L+
Sbjct: 271 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 330

Query: 407 DDRTLADYGMDLSEKVVLVF 426
           D RTLADY +     + LV 
Sbjct: 331 DGRTLADYNIQKESTLHLVL 350



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 124/209 (59%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 142 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 201

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 202 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 259

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 260 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 319

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 320 QRLIFAGKQLEDGRTLADYNIQKESTLHL 348


>gi|226763|prf||1604470A poly-ubiquitin
          Length = 272

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/266 (40%), Positives = 154/266 (57%), Gaps = 7/266 (2%)

Query: 97  GIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEV 156
           GI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +  + IFVK  TG+ + LEV
Sbjct: 2   GIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 60

Query: 157 KHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSI 213
           + S  I +VKA +    G+      +I+ GK+LED +TLA Y+++ E  L +       +
Sbjct: 61  ESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 120

Query: 214 QIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGI 273
           QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y I
Sbjct: 121 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 180

Query: 274 KNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVF 330
           +    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++F
Sbjct: 181 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 240

Query: 331 AGKRLFENHVLARYNIQKHSTLHMVL 356
           AGK+L +   LA YNIQK STLH+VL
Sbjct: 241 AGKQLEDGRTLADYNIQKESTLHLVL 266



 Score =  160 bits (406), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 102/263 (38%), Positives = 146/263 (55%), Gaps = 6/263 (2%)

Query: 21  GISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEA 79
           GI  D   L FAG +LE GR L DY I+  STLH + +    M++FVK  T +T T +E 
Sbjct: 2   GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT-LEV 60

Query: 80  MPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEI 139
               T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +  
Sbjct: 61  ESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGG 119

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 120 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 179

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 180 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 239

Query: 257 YAGTKLEACKTLASYGIKNNYVL 279
           +AG +LE  +TLA Y I+    L
Sbjct: 240 FAGKQLEDGRTLADYNIQKESTL 262



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 124/209 (59%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 58  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 117

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 118 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 175

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 176 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 235

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 236 QRLIFAGKQLEDGRTLADYNIQKESTLHL 264



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/265 (35%), Positives = 138/265 (52%), Gaps = 12/265 (4%)

Query: 174 GVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVE 230
           G+      +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE
Sbjct: 2   GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 61

Query: 231 VLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQ 287
               + +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    Q
Sbjct: 62  SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQ 121

Query: 288 IFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQ 347
           IFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQ
Sbjct: 122 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 181

Query: 348 KHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVD 401
           K STLH+VL     +          +I+L +  S+  +  K K Q         + L+  
Sbjct: 182 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 241

Query: 402 QVALQDDRTLADYGMDLSEKVVLVF 426
              L+D RTLADY +     + LV 
Sbjct: 242 GKQLEDGRTLADYNIQKESTLHLVL 266


>gi|240254322|ref|NP_176714.4| ubiquitin 13 [Arabidopsis thaliana]
 gi|332196241|gb|AEE34362.1| ubiquitin 13 [Arabidopsis thaliana]
          Length = 319

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 123/315 (39%), Positives = 174/315 (55%), Gaps = 23/315 (7%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA  +++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLA-DNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 177

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 178 KAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 237

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRL----------FEN----HVL 341
           KTITL+V+   T+ +VK K+ DK   P   Q ++FAGK+L          F+       L
Sbjct: 238 KTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEGGPGGGGGHFQKAEALAFL 297

Query: 342 ARYNIQKHSTLHMVL 356
           A YNIQK STLH+VL
Sbjct: 298 ADYNIQKESTLHLVL 312



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/267 (38%), Positives = 151/267 (56%), Gaps = 7/267 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +     +    
Sbjct: 133 AD-NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQ 191

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 192 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSGTID 251

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLE 263
           +VK  + +   +    Q L +AG +LE
Sbjct: 252 NVKAKIQDKEGIPPDQQRLIFAGKQLE 278



 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 95/259 (36%), Positives = 140/259 (54%), Gaps = 7/259 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA   I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLAD-NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 179

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +
Sbjct: 180 KIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 239

Query: 374 ISLSISISEVKEMAKVKFQ 392
           I+L +  S   +  K K Q
Sbjct: 240 ITLEVESSGTIDNVKAKIQ 258



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 115/223 (51%), Gaps = 10/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   LA  NIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLAD-NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 179

Query: 390 KFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 180 KIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 222



 Score = 39.3 bits (90), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 34/70 (48%), Gaps = 15/70 (21%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR---------------LVDYG 45
           ++V+ S  I N+KA I  KEGI  D   L FAG +LE G                L DY 
Sbjct: 242 LEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEGGPGGGGGHFQKAEALAFLADYN 301

Query: 46  IRNNSTLHFL 55
           I+  STLH +
Sbjct: 302 IQKESTLHLV 311


>gi|18421671|ref|NP_568552.1| polyubiquitin 9 [Arabidopsis thaliana]
 gi|75170661|sp|Q9FHQ6.1|UBQ9_ARATH RecName: Full=Polyubiquitin 9; Contains: RecName:
           Full=Ubiquitin-related 1; Contains: RecName:
           Full=Ubiquitin-related 2; Contains: RecName:
           Full=Ubiquitin-related 3; Contains: RecName:
           Full=Ubiquitin-related 4; Flags: Precursor
 gi|9757974|dbj|BAB08310.1| polyubiquitin [Arabidopsis thaliana]
 gi|332006830|gb|AED94213.1| polyubiquitin 9 [Arabidopsis thaliana]
          Length = 322

 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 115/302 (38%), Positives = 173/302 (57%), Gaps = 9/302 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++  K  T +T T+ + +   T+ N+K  IQ  EGI  DQ  L++ GKLL +D  T+  
Sbjct: 3   MQIHAKTLTEKTITI-DVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLL-DDGRTLAD 60

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            +I+ +SI+HL    +  + IFVK  TG+ + LEV+ S  I +VKA +    GV      
Sbjct: 61  YSIQKDSILHLALRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQR 120

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+L+D +TLA Y+++ E  L +       +QIFVRT   + + LEVE      +V
Sbjct: 121 LIFAGKQLDDGRTLADYNIQKESTLHLVLRLRGGMQIFVRTLTRKTIALEVESSDTTDNV 180

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFV T  G
Sbjct: 181 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLCGGMQIFVNTLTG 240

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFEN-HVLARYNIQKHSTLHM 354
           KTITL+V+  +T+ +VK K+ DK +     Q ++FAG++L +  + LA YNIQK STLH+
Sbjct: 241 KTITLEVESSDTIDNVKAKIQDKERIQPDQQRLIFAGEQLEDGYYTLADYNIQKESTLHL 300

Query: 355 VL 356
           VL
Sbjct: 301 VL 302



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 101/279 (36%), Positives = 149/279 (53%), Gaps = 7/279 (2%)

Query: 6   SEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKL 64
           S+ I N+KA I   EGI  D   L F+G  L+ GR L DY I+ +S LH   +    M++
Sbjct: 22  SDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYSIQKDSILHLALRLRGGMQI 81

Query: 65  FVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNI 124
           FVK  T +T T +E     T+ N+K  IQ KEG+  DQ  L++ GK L +D  T+   NI
Sbjct: 82  FVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQL-DDGRTLADYNI 139

Query: 125 KSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIY 184
           + ES +HLV   +  + IFV+  T + + LEV+ S    +VKA +    G+      +I+
Sbjct: 140 QKESTLHLVLRLRGGMQIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIF 199

Query: 185 EGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEI 241
            GK+LED +TLA Y+++ E  L +       +QIFV T   + + LEVE    + +VK  
Sbjct: 200 AGKQLEDGRTLADYNIQKESTLHLVLRLCGGMQIFVNTLTGKTITLEVESSDTIDNVKAK 259

Query: 242 VANIIDLSLGNQDLFYAGTKLE-ACKTLASYGIKNNYVL 279
           + +   +    Q L +AG +LE    TLA Y I+    L
Sbjct: 260 IQDKERIQPDQQRLIFAGEQLEDGYYTLADYNIQKESTL 298



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/304 (32%), Positives = 155/304 (50%), Gaps = 21/304 (6%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + I  K  T + + ++V  S  I +VKA +  + G+      +I+ GK L+D +TLA Y 
Sbjct: 3   MQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYS 62

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ + +L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 63  IQKDSILHLALRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLI 122

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +L+  +TLA Y I+    L +   L    QIFV+T   KTI L+V+  +T  +VK 
Sbjct: 123 FAGKQLDDGRTLADYNIQKESTLHLVLRLRGGMQIFVRTLTRKTIALEVESSDTTDNVKA 182

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFID-- 371
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL    R+     IF++  
Sbjct: 183 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL----RLCGGMQIFVNTL 238

Query: 372 --PSISLSISISEVKEMAKVKFQAAVK------ELLVDQVALQDD-RTLADYGMDLSEKV 422
              +I+L +  S+  +  K K Q   +       L+     L+D   TLADY +     +
Sbjct: 239 TGKTITLEVESSDTIDNVKAKIQDKERIQPDQQRLIFAGEQLEDGYYTLADYNIQKESTL 298

Query: 423 VLVF 426
            LV 
Sbjct: 299 HLVL 302



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/210 (38%), Positives = 118/210 (56%), Gaps = 4/210 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEG+  D   L FAG +L+ GR L DY I+  STLH + +  
Sbjct: 93  LEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYNIQKESTLHLVLRLR 152

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FV+  T +T   +E     T  N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 153 GGMQIFVRTLTRKT-IALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 210

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV      + IFV   TG+ + LEV+ S  I +VKA +     +    
Sbjct: 211 ADYNIQKESTLHLVLRLCGGMQIFVNTLTGKTITLEVESSDTIDNVKAKIQDKERIQPDQ 270

Query: 180 HIMIYEGKKLEDS-KTLAFYDMKDECLLEM 208
             +I+ G++LED   TLA Y+++ E  L +
Sbjct: 271 QRLIFAGEQLEDGYYTLADYNIQKESTLHL 300



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 77/224 (34%), Positives = 118/224 (52%), Gaps = 9/224 (4%)

Query: 212 SIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASY 271
           S+QI  +T  E+ + ++V     + +VK  + +I  + L  Q L ++G  L+  +TLA Y
Sbjct: 2   SMQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADY 61

Query: 272 GIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSI 328
            I+ + +L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q +
Sbjct: 62  SIQKDSILHLALRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRL 121

Query: 329 VFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAK 388
           +FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +  K
Sbjct: 122 IFAGKQLDDGRTLADYNIQKESTLHLVLRLRGGMQIFVRTLTRKTIALEVESSDTTDNVK 181

Query: 389 VKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
            K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 182 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 225


>gi|340058|gb|AAA36787.1| ubiquitin precursor, partial [Homo sapiens]
          Length = 269

 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 104/262 (39%), Positives = 155/262 (59%), Gaps = 7/262 (2%)

Query: 101 DQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSF 160
           DQ  L++ GK L ED  T++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S 
Sbjct: 3   DQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 61

Query: 161 AIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFV 217
            I +VKA +    G+      +I+ GK+LED +TL+ Y+++ E  L +       +QIFV
Sbjct: 62  TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 121

Query: 218 RTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNY 277
           +T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y I+   
Sbjct: 122 KTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 181

Query: 278 VLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKR 334
            L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+
Sbjct: 182 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ 241

Query: 335 LFENHVLARYNIQKHSTLHMVL 356
           L +   L+ YNIQK STLH+VL
Sbjct: 242 LEDGRTLSDYNIQKESTLHLVL 263



 Score =  160 bits (406), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 99/259 (38%), Positives = 147/259 (56%), Gaps = 6/259 (2%)

Query: 25  DICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYH 83
           D   L FAG +LE GR L DY I+  STLH + +    M++FVK  T +T T +E  P  
Sbjct: 3   DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT-LEVEPSD 61

Query: 84  TVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIF 143
           T++N+K  IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV   +  + IF
Sbjct: 62  TIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIF 120

Query: 144 VKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDE 203
           VK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+++ E
Sbjct: 121 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 180

Query: 204 CLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGT 260
             L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG 
Sbjct: 181 STLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 240

Query: 261 KLEACKTLASYGIKNNYVL 279
           +LE  +TL+ Y I+    L
Sbjct: 241 QLEDGRTLSDYNIQKESTL 259



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 128/209 (61%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 55  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 114

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 115 GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 172

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 173 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 232

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 233 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 261



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/257 (35%), Positives = 138/257 (53%), Gaps = 12/257 (4%)

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 7   LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 66

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 67  KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 126

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 127 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 186

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 187 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 246

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 247 TLSDYNIQKESTLHLVL 263



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 98/184 (53%), Gaps = 9/184 (4%)

Query: 252 NQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTV 308
            Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+
Sbjct: 4   QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTI 63

Query: 309 QDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLI 368
           ++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +      
Sbjct: 64  ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKT 123

Query: 369 FIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKV 422
               +I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     +
Sbjct: 124 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 183

Query: 423 VLVF 426
            LV 
Sbjct: 184 HLVL 187



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 6/111 (5%)

Query: 322 PLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISIS 381
           P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S
Sbjct: 1   PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPS 60

Query: 382 EVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           +  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 61  DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 111


>gi|226499354|ref|NP_001147027.1| polyubiquitin containing 7 ubiquitin monomers [Zea mays]
 gi|195606596|gb|ACG25128.1| polyubiquitin containing 7 ubiquitin monomers [Zea mays]
          Length = 311

 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 117/306 (38%), Positives = 171/306 (55%), Gaps = 12/306 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L++    + S
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRNLIFS 59

Query: 122 MNIK----SESIIHLVFCPKEI-LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVS 176
              +    + S I     P+   + IFVK  TG+ + LEV+ S  I +VKA +    G+ 
Sbjct: 60  PFARNAHTARSPISDPRSPRRSKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 119

Query: 177 AADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLI 233
                +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE   
Sbjct: 120 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD 179

Query: 234 VVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFV 290
            + +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFV
Sbjct: 180 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFV 239

Query: 291 KTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHS 350
           KT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK S
Sbjct: 240 KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKES 299

Query: 351 TLHMVL 356
           TLH+VL
Sbjct: 300 TLHLVL 305



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 107/289 (37%), Positives = 156/289 (53%), Gaps = 12/289 (4%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGRLVDYG--IRNNSTLHF---- 54
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR + +    RN  T       
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRNLIFSPFARNAHTARSPISD 74

Query: 55  -LHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLK 113
                 S+M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L 
Sbjct: 75  PRSPRRSKMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL- 132

Query: 114 EDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVV 173
           ED  T+   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    
Sbjct: 133 EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 192

Query: 174 GVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVE 230
           G+      +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE
Sbjct: 193 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 252

Query: 231 VLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
               + +VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 253 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 301



 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 105/305 (34%), Positives = 152/305 (49%), Gaps = 18/305 (5%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED + L F  
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRNLIFSP 60

Query: 200 MKDECLLEMFP---------SSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSL 250
                     P         S +QIFV+T   + + LEVE    + +VK  + +   +  
Sbjct: 61  FARNAHTARSPISDPRSPRRSKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPP 120

Query: 251 GNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNT 307
             Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T
Sbjct: 121 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 180

Query: 308 VQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPL 367
           + +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +     
Sbjct: 181 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 240

Query: 368 IFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEK 421
                +I+L +  S+  +  K K Q         + L+     L+D RTLADY +     
Sbjct: 241 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 300

Query: 422 VVLVF 426
           + LV 
Sbjct: 301 LHLVL 305


>gi|7439572|pir||T02358 ubiquitin homolog T8F5.13 - Arabidopsis thaliana
 gi|3335355|gb|AAC27157.1| Match to polyubiquitin DNA gb|L05401 from A. thaliana. Contains
           insertion of mitochondrial NADH dehydrogenase gb|X82618
           and gb|X98301. May be a pseudogene with an expressed
           insert. EST gb|AA586248 comes from this region
           [Arabidopsis thaliana]
          Length = 324

 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 123/320 (38%), Positives = 174/320 (54%), Gaps = 28/320 (8%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA  +++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLA-DNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 177

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 178 KAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 237

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRL---------------FEN-- 338
           KTITL+V+   T+ +VK K+ DK   P   Q ++FAGK+L               F+   
Sbjct: 238 KTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEGGPGGGGGSRASRHFQKAE 297

Query: 339 --HVLARYNIQKHSTLHMVL 356
               LA YNIQK STLH+VL
Sbjct: 298 ALAFLADYNIQKESTLHLVL 317



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/267 (38%), Positives = 151/267 (56%), Gaps = 7/267 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +     +    
Sbjct: 133 AD-NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQ 191

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 192 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSGTID 251

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLE 263
           +VK  + +   +    Q L +AG +LE
Sbjct: 252 NVKAKIQDKEGIPPDQQRLIFAGKQLE 278



 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 95/259 (36%), Positives = 140/259 (54%), Gaps = 7/259 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA   I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLAD-NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 179

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +
Sbjct: 180 KIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 239

Query: 374 ISLSISISEVKEMAKVKFQ 392
           I+L +  S   +  K K Q
Sbjct: 240 ITLEVESSGTIDNVKAKIQ 258



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 115/223 (51%), Gaps = 10/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   LA  NIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLAD-NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 179

Query: 390 KFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 180 KIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 222



 Score = 38.9 bits (89), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 35/75 (46%), Gaps = 20/75 (26%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLE----------AGR---------- 40
           ++V+ S  I N+KA I  KEGI  D   L FAG +LE          A R          
Sbjct: 242 LEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEGGPGGGGGSRASRHFQKAEALAF 301

Query: 41  LVDYGIRNNSTLHFL 55
           L DY I+  STLH +
Sbjct: 302 LADYNIQKESTLHLV 316


>gi|28394784|gb|AAO42469.1| putative polyubiquitin [Arabidopsis lyrata]
          Length = 289

 Score =  177 bits (450), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 112/287 (39%), Positives = 159/287 (55%), Gaps = 15/287 (5%)

Query: 76  VVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFC 135
            +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV  
Sbjct: 5   TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLR 63

Query: 136 PKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTL 195
            +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL
Sbjct: 64  LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 123

Query: 196 AFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGN 252
           A Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    
Sbjct: 124 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 183

Query: 253 QDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQ 309
           Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+      
Sbjct: 184 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESS---- 239

Query: 310 DVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
               ++ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 240 ----EIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 282



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 111/283 (39%), Positives = 159/283 (56%), Gaps = 14/283 (4%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 6   LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 65

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 66  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 123

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 124 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 183

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    ++
Sbjct: 184 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVES-SEIQ 242

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           D + I  +        Q L +AG +LE  +TLA Y I+    L
Sbjct: 243 DKEGIPPD-------QQRLIFAGKQLEDGRTLADYNIQKESTL 278



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/284 (35%), Positives = 152/284 (53%), Gaps = 8/284 (2%)

Query: 149 GEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
           G+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 1   GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 60

Query: 209 ---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEAC 265
                  +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  
Sbjct: 61  VLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDG 120

Query: 266 KTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTP 322
           +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P
Sbjct: 121 RTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 180

Query: 323 LHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISE 382
              Q ++FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  SE
Sbjct: 181 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSE 240

Query: 383 VKEMAKVKFQAAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           +++  K       + L+     L+D RTLADY +     + LV 
Sbjct: 241 IQD--KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 282


>gi|92790166|emb|CAI83752.1| Polyubiqutin 1 [Eudiplodinium maggii]
          Length = 259

 Score =  177 bits (450), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 104/254 (40%), Positives = 151/254 (59%), Gaps = 7/254 (2%)

Query: 109 GKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAI 168
           GK L ED  T+   NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA 
Sbjct: 1   GKQL-EDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAK 59

Query: 169 VGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIV 225
           +    G+      +I+ GK+LED++TLA Y+++ E  L +       +QIFV+T   + +
Sbjct: 60  IQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 119

Query: 226 RLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---L 282
            L+VE    + +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L
Sbjct: 120 TLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRL 179

Query: 283 PSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLA 342
               QIFVKT  GKTITLDV+P +T+++VK K+ DK   P   Q ++FAGK+L +N  LA
Sbjct: 180 RGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLA 239

Query: 343 RYNIQKHSTLHMVL 356
            YNIQK STLH+VL
Sbjct: 240 DYNIQKESTLHLVL 253



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/251 (37%), Positives = 142/251 (56%), Gaps = 6/251 (2%)

Query: 33  GDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTM 91
           G +LE  R L DY I+  STLH + +    M++FVK  T +T T+ +  P  T++N+K  
Sbjct: 1   GKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL-DVEPSDTIENVKAK 59

Query: 92  IQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEI 151
           IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +  + IFVK  TG+ 
Sbjct: 60  IQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 118

Query: 152 VNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM--- 208
           + L+V+ S  I +VKA +    G+      +I+ GK+LED++TLA Y+++ E  L +   
Sbjct: 119 ITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 178

Query: 209 FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTL 268
               +QIFV+T   + + L+VE    + +VK  + +   +    Q L +AG +LE  +TL
Sbjct: 179 LRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTL 238

Query: 269 ASYGIKNNYVL 279
           A Y I+    L
Sbjct: 239 ADYNIQKESTL 249



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/253 (37%), Positives = 138/253 (54%), Gaps = 12/253 (4%)

Query: 186 GKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIV 242
           GK+LED++TLA Y+++ E  L +       +QIFV+T   + + L+VE    + +VK  +
Sbjct: 1   GKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKI 60

Query: 243 ANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTIT 299
            +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTIT
Sbjct: 61  QDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 120

Query: 300 LDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPS 359
           LDV+P +T+++VK K+ DK   P   Q ++FAGK+L +N  LA YNIQK STLH+VL   
Sbjct: 121 LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLR 180

Query: 360 SRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLAD 413
             +          +I+L +  S+  E  K K Q         + L+     L+D+RTLAD
Sbjct: 181 GGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLAD 240

Query: 414 YGMDLSEKVVLVF 426
           Y +     + LV 
Sbjct: 241 YNIQKESTLHLVL 253



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 86/209 (41%), Positives = 126/209 (60%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I+N+KA I  KEGI  D   L FAG +LE  R L DY I+  STLH + +  
Sbjct: 45  LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLR 104

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T ++  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 105 GGMQIFVKTLTGKTIT-LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTL 162

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+    
Sbjct: 163 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQ 222

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED++TLA Y+++ E  L +
Sbjct: 223 QRLIFAGKQLEDNRTLADYNIQKESTLHL 251


>gi|90655082|gb|ABD96088.1| polyubiquitin [Malus x domestica]
          Length = 270

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/265 (40%), Positives = 153/265 (57%), Gaps = 7/265 (2%)

Query: 98  IQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVK 157
           I  DQ  L++ GK L ED  T+   NI+ ES +HLV   +  + IFVK  TG+ + LEV+
Sbjct: 1   IPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 59

Query: 158 HSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQ 214
            S  I +VKA +    G+      +I+ GK+LED +TLA Y+++ E  L +       +Q
Sbjct: 60  SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQ 119

Query: 215 IFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIK 274
           IFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y I+
Sbjct: 120 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 179

Query: 275 NNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFA 331
               L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FA
Sbjct: 180 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 239

Query: 332 GKRLFENHVLARYNIQKHSTLHMVL 356
           GK+L +   LA YNIQK STLH+VL
Sbjct: 240 GKQLEDGRTLADYNIQKESTLHLVL 264



 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 101/262 (38%), Positives = 145/262 (55%), Gaps = 6/262 (2%)

Query: 22  ISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAM 80
           I  D   L FAG +LE GR L DY I+  STLH + +    M++FVK  T +T T +E  
Sbjct: 1   IPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT-LEVE 59

Query: 81  PYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEIL 140
              T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +  +
Sbjct: 60  SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGM 118

Query: 141 SIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDM 200
            IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y++
Sbjct: 119 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 178

Query: 201 KDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFY 257
           + E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L +
Sbjct: 179 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 238

Query: 258 AGTKLEACKTLASYGIKNNYVL 279
           AG +LE  +TLA Y I+    L
Sbjct: 239 AGKQLEDGRTLADYNIQKESTL 260



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 124/209 (59%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 56  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 115

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 116 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 173

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 174 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 233

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 234 QRLIFAGKQLEDGRTLADYNIQKESTLHL 262



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 92/257 (35%), Positives = 136/257 (52%), Gaps = 12/257 (4%)

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 8   LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 67

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 68  KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 127

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 128 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 187

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 188 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 247

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 248 TLADYNIQKESTLHLVL 264



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 96/184 (52%), Gaps = 9/184 (4%)

Query: 252 NQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTV 308
            Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+
Sbjct: 5   QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 64

Query: 309 QDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLI 368
            +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +      
Sbjct: 65  DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKT 124

Query: 369 FIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKV 422
               +I+L +  S+  +  K K Q         + L+     L+D RTLADY +     +
Sbjct: 125 LTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 184

Query: 423 VLVF 426
            LV 
Sbjct: 185 HLVL 188


>gi|327356699|gb|EGE85556.1| hypothetical protein BDDG_08501 [Ajellomyces dermatitidis ATCC
           18188]
          Length = 333

 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 118/329 (35%), Positives = 176/329 (53%), Gaps = 36/329 (10%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +     T+  +K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-DVESGDTIDAVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLV----------------------FCPKE------ILSIFVKAATGEIVN 153
            NI+ ES +HLV                      F  +E       L   VK  TG+ + 
Sbjct: 59  YNIQKESTLHLVLRLRGGMQICMSFEQVLSYIDMFYVRENQALTYTLQTVVKTLTGKTIT 118

Query: 154 LEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FP 210
           LEV+ S  I +VK+ +    G+      +I+ GK+LED +TL+ Y+++ E  L +     
Sbjct: 119 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 178

Query: 211 SSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLAS 270
             +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ 
Sbjct: 179 GGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 238

Query: 271 YGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQS 327
           Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q 
Sbjct: 239 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 298

Query: 328 IVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 299 LIFAGKQLEDGRTLSDYNIQKESTLHLVL 327



 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 107/311 (34%), Positives = 160/311 (51%), Gaps = 34/311 (10%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL---- 55
           + V+  + I  +K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH +    
Sbjct: 15  LDVESGDTIDAVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 56  ---------HQNLSEMKLF---------------VKIPTNQTATVVEAMPYHTVQNIKTM 91
                     Q LS + +F               VK  T +T T +E     T+ N+K+ 
Sbjct: 75  GGMQICMSFEQVLSYIDMFYVRENQALTYTLQTVVKTLTGKTIT-LEVESSDTIDNVKSK 133

Query: 92  IQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEI 151
           IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV   +  + IFVK  TG+ 
Sbjct: 134 IQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 192

Query: 152 VNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM--- 208
           + LEV+ S  I +VK+ +    G+      +I+ GK+LED +TL+ Y+++ E  L +   
Sbjct: 193 ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 252

Query: 209 FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTL 268
               +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL
Sbjct: 253 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTL 312

Query: 269 ASYGIKNNYVL 279
           + Y I+    L
Sbjct: 313 SDYNIQKESTL 323



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 85/209 (40%), Positives = 126/209 (60%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 119 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 178

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 179 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 236

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 237 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 296

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 297 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 325



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/327 (30%), Positives = 159/327 (48%), Gaps = 40/327 (12%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + L+V+    I  VK+ +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLDVESGDTIDAVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDE---------------CL--------LEMF--------PSSIQIFVRTPIEEIVRLE 228
           ++ E               C+        ++MF          ++Q  V+T   + + LE
Sbjct: 61  IQKESTLHLVLRLRGGMQICMSFEQVLSYIDMFYVRENQALTYTLQTVVKTLTGKTITLE 120

Query: 229 VEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSP 285
           VE    + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L   
Sbjct: 121 VESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 180

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 181 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 240

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELL 399
           IQK STLH+VL     +          +I+L +  S+  +  K K Q         + L+
Sbjct: 241 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 300

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 301 FAGKQLEDGRTLSDYNIQKESTLHLVL 327


>gi|24640094|ref|NP_572306.1| CG11700 [Drosophila melanogaster]
 gi|7290696|gb|AAF46143.1| CG11700 [Drosophila melanogaster]
          Length = 301

 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 112/298 (37%), Positives = 170/298 (57%), Gaps = 8/298 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KE    +   L++ GK L E+  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHL-ENGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES I+LV   +  + IFVK  TG+ + LEV+ S  I +VKA +            
Sbjct: 59  YNIQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDEC---LLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK LE+ +TL+ Y+++ E    L+      +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFGGKHLENGRTLSDYNIQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KARIHDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
           KTITL+V+P +T++ VK ++ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 239 KTITLEVEPSDTIKHVKARIHDKDGIPPDHQRLIFAGKQLEDGRTLSDYNIQKESTLH 296



 Score =  150 bits (380), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 99/283 (34%), Positives = 159/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KE    +   L F G  LE GR L DY I+  ST++ + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDYNIQKESTIYLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KE    +   L++ GK L E+  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHL-ENGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES I+LV   +  + IFVK  TG+ + LEV+ S +I +VKA +    G+    
Sbjct: 133 SDYNIQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKARIHDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    ++
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIK 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
            VK  + +   +   +Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 HVKARIHDKDGIPPDHQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/289 (32%), Positives = 153/289 (52%), Gaps = 12/289 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +            +I+ GK LE+ +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDYN 60

Query: 200 MKDEC---LLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E    L+      +QIFV+T   + + LEVE    + +VK  + +  +    +Q L 
Sbjct: 61  IQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNN---YVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           + G  LE  +TL+ Y I+     Y++  L    QIFVKT  GKTITL+V+P +++++VK 
Sbjct: 121 FGGKHLENGRTLSDYNIQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           ++ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 RIHDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGM 416
           I+L +  S+  +  K +           + L+     L+D RTL+DY +
Sbjct: 241 ITLEVEPSDTIKHVKARIHDKDGIPPDHQRLIFAGKQLEDGRTLSDYNI 289



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/223 (32%), Positives = 115/223 (51%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +  +    +Q L + G  LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDYN 60

Query: 273 IKNN---YVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+     Y++  L    QIFVKT  GKTITL+V+P +T+++VK K+ DK + P   Q ++
Sbjct: 61  IQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           F GK L     L+ YNIQK ST+++VL     +          +I+L +  S+  E  K 
Sbjct: 121 FGGKHLENGRTLSDYNIQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           +           + L+     L+D RTL+DY +     + LV 
Sbjct: 181 RIHDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 58/135 (42%), Positives = 83/135 (61%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA IH KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDSIENVKARIHDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++++K  I  K+GI  D   L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTIT-LEVEPSDTIKHVKARIHDKDGIPPDHQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +H  F
Sbjct: 285 SDYNIQKESTLHSHF 299


>gi|312380774|gb|EFR26677.1| hypothetical protein AND_07080 [Anopheles darlingi]
          Length = 567

 Score =  174 bits (441), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 108/298 (36%), Positives = 171/298 (57%), Gaps = 12/298 (4%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ + +P  TV +IK+ I+ +EGI  DQ  +++ GK L E+   ++ 
Sbjct: 1   MQIFVKTLTGKTITL-DVVPTETVLDIKSKIEEREGIDPDQQRIIFAGKQL-ENGRIISD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+  S +HLV   K  + IFV+  TG+ + ++ +    +  VK  +     +      
Sbjct: 59  YNIQHGSTMHLVLRLKGGMQIFVRMLTGKTIAIDTEPEATVESVKKQIDEREEIPPNQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEI 241
           MI+ GK+LED +TL  Y +       +  +++QIFV+T   + + LEVE    + +VK  
Sbjct: 119 MIFAGKQLEDGRTLEEYSI-------IKATNMQIFVKTLTGKTITLEVEPSDTIENVKAK 171

Query: 242 VANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTI 298
           + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTI
Sbjct: 172 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 231

Query: 299 TLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           TL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 232 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 289



 Score =  140 bits (354), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 106/344 (30%), Positives = 178/344 (51%), Gaps = 21/344 (6%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGRLV-DYGIRNNSTLHFLHQNL 59
           + V  +E + ++K+ I  +EGI  D   + FAG +LE GR++ DY I++ ST+H + +  
Sbjct: 15  LDVVPTETVLDIKSKIEEREGIDPDQQRIIFAGKQLENGRIISDYNIQHGSTMHLVLRLK 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FV++ T +T   ++  P  TV+++K  I  +E I  +Q  +++ GK L ED  T+
Sbjct: 75  GGMQIFVRMLTGKT-IAIDTEPEATVESVKKQIDEREEIPPNQQRMIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
                   SII         + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 EEY-----SIIKATN-----MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 182

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 183 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 242

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLD-VLPSPFQIFVKTWGG 295
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L  VLP    +      G
Sbjct: 243 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLPGAIDVPPCALCG 302

Query: 296 KTITLDVQPYNTVQDVK----VKLFDKLQTPLHLQSIVFAGKRL 335
           +   L VQ Y  ++D +    + +F  L  P   QS  ++  R+
Sbjct: 303 QQRPLIVQIYAPLEDSQFHRTLYVFACLNAPCSTQSQSWSCIRV 346



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 152/296 (51%), Gaps = 16/296 (5%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + L+V  +  + D+K+ +    G+      +I+ GK+LE+ + ++ Y+
Sbjct: 1   MQIFVKTLTGKTITLDVVPTETVLDIKSKIEEREGIDPDQQRIIFAGKQLENGRIISDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++    + +       +QIFVR    + + ++ E    V  VK+ +    ++    Q + 
Sbjct: 61  IQHGSTMHLVLRLKGGMQIFVRMLTGKTIAIDTEPEATVESVKKQIDEREEIPPNQQRMI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLF 316
           +AG +LE  +TL  Y I       +  +  QIFVKT  GKTITL+V+P +T+++VK K+ 
Sbjct: 121 FAGKQLEDGRTLEEYSI-------IKATNMQIFVKTLTGKTITLEVEPSDTIENVKAKIQ 173

Query: 317 DKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISL 376
           DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +I+L
Sbjct: 174 DKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL 233

Query: 377 SISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
            +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 234 EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 289


>gi|3603456|gb|AAC35858.1| polyubiquitin [Capsicum chinense]
          Length = 265

 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/258 (40%), Positives = 150/258 (58%), Gaps = 7/258 (2%)

Query: 105 LVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRD 164
           L++ GK L ED  T+   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +
Sbjct: 3   LIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDN 61

Query: 165 VKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPI 221
           VKA +    G+      +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T  
Sbjct: 62  VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLT 121

Query: 222 EEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV 281
            + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +
Sbjct: 122 GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 181

Query: 282 ---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFEN 338
              L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L + 
Sbjct: 182 VLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDG 241

Query: 339 HVLARYNIQKHSTLHMVL 356
             LA YNIQK STLH+VL
Sbjct: 242 RTLADYNIQKESTLHLVL 259



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/255 (38%), Positives = 143/255 (56%), Gaps = 6/255 (2%)

Query: 29  LFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQN 87
           L FAG +LE GR L DY I+  STLH + +    M++FVK  T +T T +E     T+ N
Sbjct: 3   LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT-LEVESSDTIDN 61

Query: 88  IKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAA 147
           +K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +  + IFVK  
Sbjct: 62  VKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 120

Query: 148 TGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLE 207
           TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+++ E  L 
Sbjct: 121 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 180

Query: 208 M---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEA 264
           +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE 
Sbjct: 181 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLED 240

Query: 265 CKTLASYGIKNNYVL 279
            +TLA Y I+    L
Sbjct: 241 GRTLADYNIQKESTL 255



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/209 (41%), Positives = 123/209 (58%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 51  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 110

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 111 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 168

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 169 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQ 228

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 229 QRLIFAGKQLEDGRTLADYNIQKESTLHL 257



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 92/257 (35%), Positives = 136/257 (52%), Gaps = 12/257 (4%)

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 3   LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 62

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 63  KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 122

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 123 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 182

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 183 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR 242

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 243 TLADYNIQKESTLHLVL 259



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/183 (37%), Positives = 96/183 (52%), Gaps = 9/183 (4%)

Query: 253 QDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQ 309
           Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ 
Sbjct: 1   QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 60

Query: 310 DVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIF 369
           +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +       
Sbjct: 61  NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 120

Query: 370 IDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVV 423
              +I+L +  S+  +  K K Q         + L+     L+D RTLADY +     + 
Sbjct: 121 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 180

Query: 424 LVF 426
           LV 
Sbjct: 181 LVL 183


>gi|164708|gb|AAA31133.1| poly-ubiquitin precursor, partial [Sus scrofa]
          Length = 255

 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 98/249 (39%), Positives = 147/249 (59%), Gaps = 6/249 (2%)

Query: 114 EDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVV 173
           ED  T++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    
Sbjct: 1   EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 60

Query: 174 GVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVE 230
           G+      +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE
Sbjct: 61  GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 120

Query: 231 VLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQ 287
               + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    Q
Sbjct: 121 PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 180

Query: 288 IFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQ 347
           IFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQ
Sbjct: 181 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 240

Query: 348 KHSTLHMVL 356
           K STLH+VL
Sbjct: 241 KESTLHLVL 249



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/247 (37%), Positives = 140/247 (56%), Gaps = 6/247 (2%)

Query: 37  EAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVK 95
           E GR L DY I+  STLH + +    M++FVK  T +T T +E  P  T++N+K  IQ K
Sbjct: 1   EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDK 59

Query: 96  EGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLE 155
           EGI  DQ  L++ GK L ED  T++  NI+ ES +HLV   +  + IFVK  TG+ + LE
Sbjct: 60  EGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 118

Query: 156 VKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSS 212
           V+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+++ E  L +       
Sbjct: 119 VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 178

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 179 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 238

Query: 273 IKNNYVL 279
           I+    L
Sbjct: 239 IQKESTL 245



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 128/209 (61%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 41  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 100

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 101 GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 158

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 159 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 218

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 219 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 247



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 86/249 (34%), Positives = 131/249 (52%), Gaps = 12/249 (4%)

Query: 190 EDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANII 246
           ED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +  
Sbjct: 1   EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 60

Query: 247 DLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQ 303
            +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+
Sbjct: 61  GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 120

Query: 304 PYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRII 363
           P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     + 
Sbjct: 121 PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 180

Query: 364 ELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMD 417
                    +I+L +  S+  E  K K Q         + L+     L+D RTL+DY + 
Sbjct: 181 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 240

Query: 418 LSEKVVLVF 426
               + LV 
Sbjct: 241 KESTLHLVL 249


>gi|578549|emb|CAA80335.1| ubiquitin [Tetrahymena pyriformis]
          Length = 303

 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 102/301 (33%), Positives = 170/301 (56%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T   ++      +  IK  I  KEGI SDQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTV-ALDVSSTDNIDTIKQKIYDKEGIPSDQQRLIFAGKQL-EDGRTVSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + +FVK  TG+ + L+V  +  I ++KA +    G+ +    
Sbjct: 59  YNIQKESTVHLVLRLRGGMQVFVKTLTGKTITLDVAQTDNIENIKAKIQDKEGIPSDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +T++ Y+++ E  L +       +Q+FV+T   + + L+++    + +V
Sbjct: 119 LIFAGKQLEDERTVSDYNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLDIDSSDNIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +T+  Y I+    L +   L    QIF+KT  G
Sbjct: 179 KAKIQDKEGIPADQQRLIFAGKQLEDGRTVTDYNIQKESTLHLVLRLRGGMQIFMKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITLDV   + ++ VK ++ DK   P+  Q ++FAGK+L +   ++ YNI K STL++V
Sbjct: 239 KTITLDVNSADNIEKVKAQIQDKEGIPVDQQRLIFAGKQLEDGKTVSDYNISKESTLNLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/286 (34%), Positives = 159/286 (55%), Gaps = 6/286 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGRLV-DYGIRNNSTLHFLHQNL 59
           + V  ++ I  +K  I+ KEGI  D   L FAG +LE GR V DY I+  ST+H + +  
Sbjct: 15  LDVSSTDNIDTIKQKIYDKEGIPSDQQRLIFAGKQLEDGRTVSDYNIQKESTVHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T ++      ++NIK  IQ KEGI SDQ  L++ GK L ED  T+
Sbjct: 75  GGMQVFVKTLTGKTIT-LDVAQTDNIENIKAKIQDKEGIPSDQQRLIFAGKQL-EDERTV 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + +FVK  TG+ + L++  S  I +VKA +    G+ A  
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLDIDSSDNIENVKAKIQDKEGIPADQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +T+  Y+++ E  L +       +QIF++T   + + L+V     + 
Sbjct: 193 QRLIFAGKQLEDGRTVTDYNIQKESTLHLVLRLRGGMQIFMKTLTGKTITLDVNSADNIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVL 282
            VK  + +   + +  Q L +AG +LE  KT++ Y I     L+++
Sbjct: 253 KVKAQIQDKEGIPVDQQRLIFAGKQLEDGKTVSDYNISKESTLNLV 298



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/303 (30%), Positives = 160/303 (52%), Gaps = 20/303 (6%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ V L+V  +  I  +K  +    G+ +    +I+ GK+LED +T++ Y+
Sbjct: 1   MQIFVKTLTGKTVALDVSSTDNIDTIKQKIYDKEGIPSDQQRLIFAGKQLEDGRTVSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  + +       +Q+FV+T   + + L+V     + ++K  + +   +    Q L 
Sbjct: 61  IQKESTVHLVLRLRGGMQVFVKTLTGKTITLDVAQTDNIENIKAKIQDKEGIPSDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +T++ Y I+    L +   L    Q+FVKT  GKTITLD+   + +++VK 
Sbjct: 121 FAGKQLEDERTVSDYNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLDIDSSDNIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFID-- 371
           K+ DK   P   Q ++FAGK+L +   +  YNIQK STLH+VL    R+     IF+   
Sbjct: 181 KIQDKEGIPADQQRLIFAGKQLEDGRTVTDYNIQKESTLHLVL----RLRGGMQIFMKTL 236

Query: 372 PSISLSISISEVKEMAKVKFQAAVKELL-VDQV-------ALQDDRTLADYGMDLSEKVV 423
              ++++ ++    + KVK Q   KE + VDQ         L+D +T++DY +     + 
Sbjct: 237 TGKTITLDVNSADNIEKVKAQIQDKEGIPVDQQRLIFAGKQLEDGKTVSDYNISKESTLN 296

Query: 424 LVF 426
           LV 
Sbjct: 297 LVL 299


>gi|89891990|gb|ABD78847.1| ubiquitin C II [Anser anser]
          Length = 271

 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 105/271 (38%), Positives = 157/271 (57%), Gaps = 8/271 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQ 326
           KTITL+V+P +T+++VK K+ DK   P   Q
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 269



 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 99/243 (40%), Positives = 145/243 (59%), Gaps = 6/243 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVK 239
           +VK
Sbjct: 253 NVK 255



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 95/259 (36%), Positives = 144/259 (55%), Gaps = 6/259 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ 392
           I+L +  S+  E  K K Q
Sbjct: 241 ITLEVEPSDTIENVKAKIQ 259



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 118/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 48/103 (46%), Positives = 65/103 (63%), Gaps = 2/103 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQ 102
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQ 268


>gi|402483942|gb|AFQ60003.1| polyubiquitin, partial [Solen grandis]
          Length = 275

 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/273 (38%), Positives = 159/273 (58%), Gaps = 6/273 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 5   LEVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 64

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     +++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 65  GGMQIFVKTLTGKTIT-LEVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 122

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S +I +VKA +    G+    
Sbjct: 123 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIENVKAKIQDKEGIPPDQ 182

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 183 QRLIFAGKHLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIE 242

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLA 269
           +VK  + +   +    Q L +AG +LE  +TL+
Sbjct: 243 NVKAKIQDKESIPPDQQRLIFAGKQLEDGRTLS 275



 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 100/273 (36%), Positives = 156/273 (57%), Gaps = 7/273 (2%)

Query: 76  VVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFC 135
            +E     +++N+K  IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV  
Sbjct: 4   TLEVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLR 62

Query: 136 PKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTL 195
            +  + IFVK  TG+ + LEV+ S +I +VKA +    G+      +I+ GK+LED +TL
Sbjct: 63  LRGGMQIFVKTLTGKTITLEVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 122

Query: 196 AFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGN 252
           + Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    
Sbjct: 123 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIENVKAKIQDKEGIPPDQ 182

Query: 253 QDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQ 309
           Q L +AG  LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  ++++
Sbjct: 183 QRLIFAGKHLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIE 242

Query: 310 DVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLA 342
           +VK K+ DK   P   Q ++FAGK+L +   L+
Sbjct: 243 NVKAKIQDKESIPPDQQRLIFAGKQLEDGRTLS 275



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 93/273 (34%), Positives = 145/273 (53%), Gaps = 12/273 (4%)

Query: 152 VNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM--- 208
           + LEV+ S +I +VKA +    G+      +I+ GK+LED +TL+ Y+++ E  L +   
Sbjct: 3   ITLEVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 62

Query: 209 FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTL 268
               +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL
Sbjct: 63  LRGGMQIFVKTLTGKTITLEVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 122

Query: 269 ASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHL 325
           + Y I+    L +   L    QIFVKT  GKTITL+V+  +++++VK K+ DK   P   
Sbjct: 123 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIENVKAKIQDKEGIPPDQ 182

Query: 326 QSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKE 385
           Q ++FAGK L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E
Sbjct: 183 QRLIFAGKHLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIE 242

Query: 386 MAKVKFQ------AAVKELLVDQVALQDDRTLA 412
             K K Q         + L+     L+D RTL+
Sbjct: 243 NVKAKIQDKESIPPDQQRLIFAGKQLEDGRTLS 275



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 109/211 (51%), Gaps = 9/211 (4%)

Query: 225 VRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV--- 281
           + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   
Sbjct: 3   ITLEVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 62

Query: 282 LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVL 341
           L    QIFVKT  GKTITL+V+  +++++VK K+ DK   P   Q ++FAGK+L +   L
Sbjct: 63  LRGGMQIFVKTLTGKTITLEVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 122

Query: 342 ARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAV 395
           + YNIQK STLH+VL     +          +I+L +  S+  E  K K Q         
Sbjct: 123 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIENVKAKIQDKEGIPPDQ 182

Query: 396 KELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           + L+     L+D RTL+DY +     + LV 
Sbjct: 183 QRLIFAGKHLEDGRTLSDYNIQKESTLHLVL 213



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 72/137 (52%), Gaps = 6/137 (4%)

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +++++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 1   KTITLEVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 60

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 61  LRLRGGMQIFVKTLTGKTITLEVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 120

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 121 TLSDYNIQKESTLHLVL 137


>gi|195587564|ref|XP_002083531.1| GD13314 [Drosophila simulans]
 gi|194195540|gb|EDX09116.1| GD13314 [Drosophila simulans]
          Length = 300

 Score =  167 bits (424), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 103/267 (38%), Positives = 156/267 (58%), Gaps = 8/267 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L E+  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQL-EEGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTP 322
           KTITL+V+P +T+++VK K+ DK   P
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIP 265



 Score =  160 bits (406), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 98/243 (40%), Positives = 144/243 (59%), Gaps = 6/243 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVK 239
           +VK
Sbjct: 253 NVK 255



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 93/259 (35%), Positives = 143/259 (55%), Gaps = 6/259 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+LE+ +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ 392
           I+L +  S+  E  K K Q
Sbjct: 241 ITLEVEPSDTIENVKAKIQ 259



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 78/184 (42%), Positives = 110/184 (59%), Gaps = 3/184 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMI 183
            + I
Sbjct: 269 QLNI 272



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 118/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223


>gi|226477452|emb|CAX72420.1| polyubiquitin [Schistosoma japonicum]
          Length = 268

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/267 (38%), Positives = 155/267 (58%), Gaps = 8/267 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +L   +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLGDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTP 322
           KTITL+V+P +T+++VK K+ DK   P
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIP 265



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/243 (40%), Positives = 144/243 (59%), Gaps = 6/243 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+L D +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLGDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVK 239
           +VK
Sbjct: 253 NVK 255



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 95/259 (36%), Positives = 144/259 (55%), Gaps = 6/259 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLGDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ 392
           I+L +  S+  E  K K Q
Sbjct: 241 ITLEVEPSDTIENVKAKIQ 259



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 117/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLGDGRTLSDYNIQKESTLHLVL 223



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 47/103 (45%), Positives = 64/103 (62%), Gaps = 2/103 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +L  GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLGDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQ 102
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQ 268


>gi|164521185|gb|ABY60454.1| putative polyubiquitin [Adonis aestivalis var. palaestina]
          Length = 281

 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/278 (38%), Positives = 156/278 (56%), Gaps = 8/278 (2%)

Query: 51  TLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGK 110
           TLH + +    M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK
Sbjct: 1   TLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK 59

Query: 111 LLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVG 170
            L ED  T+   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA + 
Sbjct: 60  QL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 118

Query: 171 SVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRL 227
              G+      +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + L
Sbjct: 119 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL 178

Query: 228 EVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPS 284
           EVE    + +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L  
Sbjct: 179 EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 238

Query: 285 PFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTP 322
             QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P
Sbjct: 239 GMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 276



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/269 (36%), Positives = 147/269 (54%), Gaps = 6/269 (2%)

Query: 130 IHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKL 189
           +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+L
Sbjct: 2   LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL 61

Query: 190 EDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANII 246
           ED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +  
Sbjct: 62  EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 121

Query: 247 DLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQ 303
            +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+
Sbjct: 122 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 181

Query: 304 PYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRII 363
             +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     + 
Sbjct: 182 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQ 241

Query: 364 ELPLIFIDPSISLSISISEVKEMAKVKFQ 392
                    +I+L +  S+  +  K K Q
Sbjct: 242 IFVKTLTGKTITLEVESSDTIDNVKAKIQ 270



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/243 (40%), Positives = 141/243 (58%), Gaps = 6/243 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 26  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 85

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 86  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 143

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 144 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 203

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 204 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 263

Query: 237 DVK 239
           +VK
Sbjct: 264 NVK 266



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 80/225 (35%), Positives = 116/225 (51%), Gaps = 9/225 (4%)

Query: 211 SSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLAS 270
             +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA 
Sbjct: 10  GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 69

Query: 271 YGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQS 327
           Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q 
Sbjct: 70  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 129

Query: 328 IVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMA 387
           ++FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +  
Sbjct: 130 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 189

Query: 388 KVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 190 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 234



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/103 (45%), Positives = 62/103 (60%), Gaps = 2/103 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 178 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 237

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQ 102
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ
Sbjct: 238 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQ 279


>gi|19698785|gb|AAL91103.1| ubiquitin [Acanthocheilonema viteae]
          Length = 258

 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 95/245 (38%), Positives = 144/245 (58%), Gaps = 6/245 (2%)

Query: 118 TMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSA 177
           T++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+  
Sbjct: 8   TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 67

Query: 178 ADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIV 234
               +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    
Sbjct: 68  DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 127

Query: 235 VRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVK 291
           + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVK
Sbjct: 128 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVK 187

Query: 292 TWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHST 351
           T  GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK ST
Sbjct: 188 TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 247

Query: 352 LHMVL 356
           LH+VL
Sbjct: 248 LHLVL 252



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 87/209 (41%), Positives = 127/209 (60%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 44  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 103

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 104 GGMQIFVKTLTGKTIT-LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 161

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 162 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 221

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 222 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 250



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 90/245 (36%), Positives = 137/245 (55%), Gaps = 5/245 (2%)

Query: 38  AGRLVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEG 97
           A  L DY I+  STLH + +    M++FVK  T +T T+ E     T++N+K  IQ KEG
Sbjct: 6   ARTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEG 64

Query: 98  IQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVK 157
           I  DQ  L++ GK L ED  T++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+
Sbjct: 65  IPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 123

Query: 158 HSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQ 214
            S  I +VKA +    G+      +I+ GK+LED +TL+ Y+++ E  L +       +Q
Sbjct: 124 ASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 183

Query: 215 IFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIK 274
           IFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y I+
Sbjct: 184 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 243

Query: 275 NNYVL 279
               L
Sbjct: 244 KESTL 248



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 83/247 (33%), Positives = 129/247 (52%), Gaps = 12/247 (4%)

Query: 192 SKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDL 248
           ++TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +
Sbjct: 6   ARTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGI 65

Query: 249 SLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPY 305
               Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  
Sbjct: 66  PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEAS 125

Query: 306 NTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIEL 365
           +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +   
Sbjct: 126 DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF 185

Query: 366 PLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLS 419
                  +I+L +  S+  E  K K Q         + L+     L+D RTL+DY +   
Sbjct: 186 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 245

Query: 420 EKVVLVF 426
             + LV 
Sbjct: 246 STLHLVL 252


>gi|28436481|gb|AAO43307.1| putative polyubiquitin [Arabidopsis thaliana]
          Length = 250

 Score =  164 bits (416), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 97/240 (40%), Positives = 140/240 (58%), Gaps = 6/240 (2%)

Query: 123 NIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIM 182
           NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      +
Sbjct: 4   NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 63

Query: 183 IYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVK 239
           I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +VK
Sbjct: 64  IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 123

Query: 240 EIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGK 296
             + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GK
Sbjct: 124 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 183

Query: 297 TITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           TITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 184 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 243



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 124/209 (59%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 35  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 94

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 95  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 152

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 153 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 212

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 213 QRLIFAGKQLEDGRTLADYNIQKESTLHL 241



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/241 (37%), Positives = 133/241 (55%), Gaps = 5/241 (2%)

Query: 42  VDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSD 101
            DY I+  STLH + +    M++FVK  T +T T+ E     T+ N+K  IQ KEGI  D
Sbjct: 1   ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPD 59

Query: 102 QFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFA 161
           Q  L++ GK L ED  T+   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  
Sbjct: 60  QQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 118

Query: 162 IRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVR 218
           I +VKA +    G+      +I+ GK+LED +TLA Y+++ E  L +       +QIFV+
Sbjct: 119 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 178

Query: 219 TPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYV 278
           T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y I+    
Sbjct: 179 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 238

Query: 279 L 279
           L
Sbjct: 239 L 239



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 84/243 (34%), Positives = 124/243 (51%), Gaps = 12/243 (4%)

Query: 196 AFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGN 252
           A Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    
Sbjct: 1   ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 60

Query: 253 QDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQ 309
           Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ 
Sbjct: 61  QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 120

Query: 310 DVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIF 369
           +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +       
Sbjct: 121 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 180

Query: 370 IDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVV 423
              +I+L +  S+  +  K K Q         + L+     L+D RTLADY +     + 
Sbjct: 181 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 240

Query: 424 LVF 426
           LV 
Sbjct: 241 LVL 243



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 187 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 242


>gi|221048065|gb|ACL98140.1| ubiquitin C variant [Epinephelus coioides]
          Length = 255

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/257 (38%), Positives = 151/257 (58%), Gaps = 8/257 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVK 312
           KTITL+V+P +T+++VK
Sbjct: 239 KTITLEVEPSDTIENVK 255



 Score =  161 bits (407), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 99/243 (40%), Positives = 145/243 (59%), Gaps = 6/243 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVK 239
           +VK
Sbjct: 253 NVK 255



 Score =  154 bits (389), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 88/223 (39%), Positives = 132/223 (59%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 118/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223


>gi|324520160|gb|ADY47572.1| Polyubiquitin-A, partial [Ascaris suum]
          Length = 354

 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/263 (38%), Positives = 153/263 (58%), Gaps = 8/263 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDK 318
           KTITL+V+  +T+++VK K+ DK
Sbjct: 239 KTITLEVEASDTIENVKAKIQDK 261



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 98/243 (40%), Positives = 144/243 (59%), Gaps = 6/243 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 252

Query: 237 DVK 239
           +VK
Sbjct: 253 NVK 255



 Score =  157 bits (398), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 102/295 (34%), Positives = 157/295 (53%), Gaps = 8/295 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ--AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q      EL        DD+   D  ++L E +V+ +
Sbjct: 241 ITLEVEASDTIENVKAKIQDKEGRGELRTMIYGFGDDKVPYDKTLELLENIVVDY 295



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/108 (42%), Positives = 67/108 (62%), Gaps = 3/108 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVY 107
             M++FVK  T +T T+ E     T++N+K  IQ KEG + +  T++Y
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEG-RGELRTMIY 272


>gi|93359417|gb|ABF13286.1| polyubiquitin [Anser anser]
          Length = 265

 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/259 (38%), Positives = 153/259 (59%), Gaps = 8/259 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNN---YVLDVLPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+     +++  L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTPHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVK 314
           KTITL+V+P +T+++VK +
Sbjct: 239 KTITLEVEPSDTIENVKAR 257



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/243 (40%), Positives = 145/243 (59%), Gaps = 6/243 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDEC---LLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E    L+      +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTPHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVK 239
           +VK
Sbjct: 253 NVK 255



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 87/223 (39%), Positives = 131/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK ST H+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTPHLVL 223



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 115/213 (53%), Gaps = 9/213 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGM 416
           K Q         + L+     L+D RTL+DY +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 213



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 80/147 (54%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|28436487|gb|AAO43310.1| putative polyubiquitin [Arabidopsis thaliana]
          Length = 250

 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 97/240 (40%), Positives = 140/240 (58%), Gaps = 6/240 (2%)

Query: 123 NIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIM 182
           NI+ E  +HLV   +  + IFVK  TG+ + LEVK S  I ++KA +    G+      +
Sbjct: 4   NIQKEPTLHLVLRLRGGMQIFVKTLTGKTITLEVKSSDTIDNIKAKIQDKEGIPPDQQRL 63

Query: 183 IYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVK 239
           I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   +I+ LEVE    + +VK
Sbjct: 64  IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKIITLEVESSDTIDNVK 123

Query: 240 EIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGK 296
             + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GK
Sbjct: 124 AKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 183

Query: 297 TITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           TITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 184 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAVYNIQKESTLHLVL 243



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 87/209 (41%), Positives = 122/209 (58%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++VK S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 35  LEVKSSDTIDNIKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 94

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +  T+ E     T+ N+K  IQ KE I  DQ  L++ GK L ED  T+
Sbjct: 95  GGMQIFVKTLTGKIITL-EVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQL-EDGRTL 152

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 153 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 212

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 213 QRLIFAGKQLEDGRTLAVYNIQKESTLHL 241



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/241 (37%), Positives = 132/241 (54%), Gaps = 5/241 (2%)

Query: 42  VDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSD 101
            DY I+   TLH + +    M++FVK  T +T T +E     T+ NIK  IQ KEGI  D
Sbjct: 1   ADYNIQKEPTLHLVLRLRGGMQIFVKTLTGKTIT-LEVKSSDTIDNIKAKIQDKEGIPPD 59

Query: 102 QFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFA 161
           Q  L++ GK L ED  T+   NI+ ES +HLV   +  + IFVK  TG+I+ LEV+ S  
Sbjct: 60  QQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKIITLEVESSDT 118

Query: 162 IRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVR 218
           I +VKA +     +      +I+ GK+LED +TLA Y+++ E  L +       +QIFV+
Sbjct: 119 IDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 178

Query: 219 TPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYV 278
           T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y I+    
Sbjct: 179 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAVYNIQKEST 238

Query: 279 L 279
           L
Sbjct: 239 L 239



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/167 (35%), Positives = 84/167 (50%), Gaps = 9/167 (5%)

Query: 269 ASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHL 325
           A Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ ++K K+ DK   P   
Sbjct: 1   ADYNIQKEPTLHLVLRLRGGMQIFVKTLTGKTITLEVKSSDTIDNIKAKIQDKEGIPPDQ 60

Query: 326 QSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKE 385
           Q ++FAGK+L +   LA YNIQK STLH+VL     +           I+L +  S+  +
Sbjct: 61  QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKIITLEVESSDTID 120

Query: 386 MAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
             K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 121 NVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 167


>gi|374412404|gb|AEZ49160.1| polyubiquitin, partial [Wolffia australiana]
          Length = 281

 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/265 (39%), Positives = 151/265 (56%), Gaps = 8/265 (3%)

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
           S+M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 19  SKMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 76

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 77  ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 136

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 137 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 196

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 197 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 256

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDK 318
            GKTITL+V   +T+ +VK K+ DK
Sbjct: 257 TGKTITLEVASSDTIDNVKAKIQDK 281



 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 96/259 (37%), Positives = 143/259 (55%), Gaps = 6/259 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 21  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 80

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 81  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 140

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 141 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 200

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +
Sbjct: 201 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 260

Query: 374 ISLSISISEVKEMAKVKFQ 392
           I+L ++ S+  +  K K Q
Sbjct: 261 ITLEVASSDTIDNVKAKIQ 279



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 98/243 (40%), Positives = 140/243 (57%), Gaps = 6/243 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 35  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 94

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 95  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 152

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 153 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 212

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEV     + 
Sbjct: 213 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVASSDTID 272

Query: 237 DVK 239
           +VK
Sbjct: 273 NVK 275



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 117/225 (52%), Gaps = 9/225 (4%)

Query: 211 SSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLAS 270
           S +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA 
Sbjct: 19  SKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 78

Query: 271 YGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQS 327
           Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q 
Sbjct: 79  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 138

Query: 328 IVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMA 387
           ++FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +  
Sbjct: 139 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 198

Query: 388 KVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 199 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 243



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/151 (38%), Positives = 80/151 (52%), Gaps = 6/151 (3%)

Query: 282 LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVL 341
           L S  QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L
Sbjct: 17  LQSKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 76

Query: 342 ARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAV 395
           A YNIQK STLH+VL     +          +I+L +  S+  +  K K Q         
Sbjct: 77  ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 136

Query: 396 KELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           + L+     L+D RTLADY +     + LV 
Sbjct: 137 QRLIFAGKQLEDGRTLADYNIQKESTLHLVL 167


>gi|28436483|gb|AAO43308.1| putative polyubiquitin [Arabidopsis thaliana]
          Length = 250

 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 97/240 (40%), Positives = 140/240 (58%), Gaps = 6/240 (2%)

Query: 123 NIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIM 182
           NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      +
Sbjct: 4   NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 63

Query: 183 IYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVK 239
           I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +VK
Sbjct: 64  IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 123

Query: 240 EIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGK 296
             + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GK
Sbjct: 124 AKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 183

Query: 297 TITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           TITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 184 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAVYNIQKESTLHLVL 243



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 87/209 (41%), Positives = 123/209 (58%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 35  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 94

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KE I  DQ  L++ GK L ED  T+
Sbjct: 95  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQL-EDGRTL 152

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 153 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 212

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 213 QRLIFAGKQLEDGRTLAVYNIQKESTLHL 241



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/241 (36%), Positives = 132/241 (54%), Gaps = 5/241 (2%)

Query: 42  VDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSD 101
            DY I+  STLH + +    M++FVK  T +T T +E     T+ N+K  IQ KEGI  D
Sbjct: 1   ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPD 59

Query: 102 QFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFA 161
           Q  L++ GK L ED  T+   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  
Sbjct: 60  QQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 118

Query: 162 IRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVR 218
           I +VKA +     +      +I+ GK+LED +TLA Y+++ E  L +       +QIFV+
Sbjct: 119 IDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 178

Query: 219 TPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYV 278
           T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y I+    
Sbjct: 179 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAVYNIQKEST 238

Query: 279 L 279
           L
Sbjct: 239 L 239



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/243 (34%), Positives = 123/243 (50%), Gaps = 12/243 (4%)

Query: 196 AFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGN 252
           A Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    
Sbjct: 1   ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 60

Query: 253 QDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQ 309
           Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ 
Sbjct: 61  QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 120

Query: 310 DVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIF 369
           +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +       
Sbjct: 121 NVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 180

Query: 370 IDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVV 423
              +I+L +  S+  +  K K Q         + L+     L+D RTLA Y +     + 
Sbjct: 181 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAVYNIQKESTLH 240

Query: 424 LVF 426
           LV 
Sbjct: 241 LVL 243


>gi|334362473|gb|AEG78435.1| ubiquitin C variant 3 [Epinephelus coioides]
          Length = 268

 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 99/256 (38%), Positives = 150/256 (58%), Gaps = 8/256 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 2   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 59

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 60  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 119

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 120 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 179

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 180 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 239

Query: 296 KTITLDVQPYNTVQDV 311
           KTITL+V+P +T+++V
Sbjct: 240 KTITLEVEPSDTIENV 255



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/234 (41%), Positives = 141/234 (60%), Gaps = 6/234 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 16  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 75

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 76  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 133

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 134 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 193

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVE 230
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE
Sbjct: 194 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 247



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 88/223 (39%), Positives = 132/223 (59%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 2   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 61

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 62  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 121

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 122 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 181

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 182 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 224



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 80/224 (35%), Positives = 119/224 (53%), Gaps = 9/224 (4%)

Query: 212 SIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASY 271
           S+QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y
Sbjct: 1   SMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 60

Query: 272 GIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSI 328
            I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q +
Sbjct: 61  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 120

Query: 329 VFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAK 388
           +FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K
Sbjct: 121 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVK 180

Query: 389 VKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
            K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 224


>gi|145524134|ref|XP_001447897.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124415425|emb|CAK80500.1| unnamed protein product [Paramecium tetraurelia]
          Length = 358

 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 106/272 (38%), Positives = 153/272 (56%), Gaps = 13/272 (4%)

Query: 92  IQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEI 151
           IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV   +  + IFVK  TG+ 
Sbjct: 3   IQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 61

Query: 152 VNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEMFPS 211
           + L+V+ S  I  VKA +    G+      +I+ GK+LED +TL+ Y+++ E  L +   
Sbjct: 62  ITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV-- 119

Query: 212 SIQIFVRTPI----EEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKT 267
              + +R  I    +    L+VE    +  VK  + +   +    Q L +AG +LE  +T
Sbjct: 120 ---LRLRGGILLTWKNHAALDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 176

Query: 268 LASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLH 324
           L+ Y I+    L +   L    QIFVKT  GKTITLDV+P +T+  VK K+ DK   P  
Sbjct: 177 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPD 236

Query: 325 LQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
            Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 237 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 268



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 108/322 (33%), Positives = 165/322 (51%), Gaps = 22/322 (6%)

Query: 14  AMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQ 72
           A I  KEGI  D   L FAG +LE GR L DY I+  STLH + +    M++FVK  T +
Sbjct: 1   AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 60

Query: 73  TATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHL 132
           T T ++  P  T+  +K  IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +HL
Sbjct: 61  TIT-LDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHL 118

Query: 133 VFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDS 192
           V   +  + +  K        L+V+ S  I  VKA +    G+      +I+ GK+LED 
Sbjct: 119 VLRLRGGILLTWKNHAA----LDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDG 174

Query: 193 KTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLS 249
           +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    +  VK  + +   + 
Sbjct: 175 RTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIP 234

Query: 250 LGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYN 306
              Q L +AG +LE  +TL+ Y I+    L +   L     IFV  +    + + V+  +
Sbjct: 235 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIMIFVSIFTSFILYIHVKQSD 294

Query: 307 TVQDVKVKLFDKLQTPLHLQSI 328
           T+          +QT LH+QS+
Sbjct: 295 TI---------FIQTALHIQSL 307



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 87/221 (39%), Positives = 121/221 (54%), Gaps = 10/221 (4%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I  +KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 64  LDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 123

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             + L  K   N  A  VE  P  T+  +K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 124 GGILLTWK---NHAALDVE--PSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 177

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I  VKA +    G+    
Sbjct: 178 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQ 237

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFV 217
             +I+ GK+LED +TL+ Y+++ E  L +       I IFV
Sbjct: 238 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIMIFV 278



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/262 (30%), Positives = 129/262 (49%), Gaps = 10/262 (3%)

Query: 174 GVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVE 230
           G+      +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE
Sbjct: 8   GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVE 67

Query: 231 VLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVLPSPFQIFV 290
               +  VK  + +   +    Q L +AG +LE  +TL+ Y I+    L ++       +
Sbjct: 68  PSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIL 127

Query: 291 KTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHS 350
            TW      LDV+P +T+  VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK S
Sbjct: 128 LTWKNHA-ALDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 186

Query: 351 TLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVA 404
           TLH+VL     +          +I+L +  S+  +  K K Q         + L+     
Sbjct: 187 TLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQ 246

Query: 405 LQDDRTLADYGMDLSEKVVLVF 426
           L+D RTL+DY +     + LV 
Sbjct: 247 LEDGRTLSDYNIQKESTLHLVL 268



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 57/120 (47%), Gaps = 6/120 (5%)

Query: 313 VKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDP 372
            K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          
Sbjct: 1   AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 60

Query: 373 SISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           +I+L +  S+  +  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 61  TITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 120


>gi|74214198|dbj|BAE40351.1| unnamed protein product [Mus musculus]
          Length = 278

 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 98/244 (40%), Positives = 146/244 (59%), Gaps = 6/244 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE  +  +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVTTK 252

Query: 237 DVKE 240
            VK+
Sbjct: 253 KVKQ 256



 Score =  160 bits (406), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 101/257 (39%), Positives = 148/257 (57%), Gaps = 8/257 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVK 312
           KTITLDV+P  T + VK
Sbjct: 239 KTITLDVEPSVTTKKVK 255



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/223 (39%), Positives = 132/223 (59%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 118/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223


>gi|302143596|emb|CBI22349.3| unnamed protein product [Vitis vinifera]
          Length = 298

 Score =  160 bits (406), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 105/272 (38%), Positives = 154/272 (56%), Gaps = 9/272 (3%)

Query: 54  FLHQNLS-EMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLL 112
            +HQ    +M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L
Sbjct: 19  LVHQPFPFKMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL 77

Query: 113 KEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSV 172
            ED  T+   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +   
Sbjct: 78  -EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK 136

Query: 173 VGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEV 229
            G+      +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEV
Sbjct: 137 EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 196

Query: 230 EVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPF 286
           E    + +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    
Sbjct: 197 ESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 256

Query: 287 QIFVKTWGGKTITLDVQPYNTVQDVKVKLFDK 318
           QIFVKT  GKTITL+V+  +T+ +VK K+ DK
Sbjct: 257 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDK 288



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/243 (40%), Positives = 141/243 (58%), Gaps = 6/243 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 42  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 101

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 102 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 159

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 160 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 219

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 220 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 279

Query: 237 DVK 239
           +VK
Sbjct: 280 NVK 282



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/270 (36%), Positives = 147/270 (54%), Gaps = 8/270 (2%)

Query: 129 IIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKK 188
           ++H  F  K  + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+
Sbjct: 19  LVHQPFPFK--MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQ 76

Query: 189 LEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANI 245
           LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + + 
Sbjct: 77  LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK 136

Query: 246 IDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDV 302
             +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V
Sbjct: 137 EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 196

Query: 303 QPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRI 362
           +  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +
Sbjct: 197 ESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 256

Query: 363 IELPLIFIDPSISLSISISEVKEMAKVKFQ 392
                     +I+L +  S+  +  K K Q
Sbjct: 257 QIFVKTLTGKTITLEVESSDTIDNVKAKIQ 286



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 82/227 (36%), Positives = 118/227 (51%), Gaps = 9/227 (3%)

Query: 209 FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTL 268
           FP  +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL
Sbjct: 24  FPFKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 83

Query: 269 ASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHL 325
           A Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   
Sbjct: 84  ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 143

Query: 326 QSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKE 385
           Q ++FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +
Sbjct: 144 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 203

Query: 386 MAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
             K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 204 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 250



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/168 (44%), Positives = 101/168 (60%), Gaps = 3/168 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 118 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 177

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 178 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 235

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKA 167
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA
Sbjct: 236 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 283



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/152 (38%), Positives = 81/152 (53%), Gaps = 8/152 (5%)

Query: 283 PSPF--QIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHV 340
           P PF  QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   
Sbjct: 23  PFPFKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 82

Query: 341 LARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AA 394
           LA YNIQK STLH+VL     +          +I+L +  S+  +  K K Q        
Sbjct: 83  LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD 142

Query: 395 VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
            + L+     L+D RTLADY +     + LV 
Sbjct: 143 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 174



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/100 (45%), Positives = 61/100 (61%), Gaps = 2/100 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 194 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 253

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQ 99
             M++FVK  T +T T+ E     T+ N+K  IQ KEG+Q
Sbjct: 254 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGMQ 292


>gi|340374063|ref|XP_003385558.1| PREDICTED: polyubiquitin-C-like, partial [Amphimedon queenslandica]
          Length = 675

 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 119/380 (31%), Positives = 201/380 (52%), Gaps = 27/380 (7%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLF--FAGDRLEAGRLVDYGIRNNSTLHFLHQN 58
           +KV  ++ I+N+K+ I  K+ I  D   L   +      +  L DY I + + L+  H  
Sbjct: 37  LKVDPNDTIENIKSQIQAKKMIPIDQQKLITRYRKQLDNSLTLSDYNIEDKAILYLTHYL 96

Query: 59  LSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
            S   ++++  + +   V E +P  TV  +K MI+ KEGI S+  TL Y G+ L +D +T
Sbjct: 97  RSGTDIYIRTFSGKMV-VFEVLPTDTVSYLKKMIRDKEGISSNDQTLFYAGQQL-DDAST 154

Query: 119 MTSMNIKSESIIHLV--FCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVS 176
           + + +I  ES++ LV  FCP   ++IF K  +G+ + L V  S  + D+K  +  + G+ 
Sbjct: 155 LANYDIPMESMLQLVTRFCPN--MTIFAKTLSGKTIKLNVNFSDTVSDIKRKIEEMEGIP 212

Query: 177 AADHIMIYEGKKL--EDS----------KTLAFYDMKDECLLEM-FPSSIQ-IFVRTPIE 222
             +  +I+ G++L  ED           KTL  +++KD  +L + FPS    + V+ P  
Sbjct: 213 CHEQKIIF-GQRLLGEDYIEEALSPGKIKTLLDHNVKDGSILHLIFPSRASGVIVKFPAG 271

Query: 223 EIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVL 282
           +I+ L+ E    + +VK  + +   +    Q L +A  +LE  +TL+ Y I+N   + +L
Sbjct: 272 KIIMLDTEPSDTIENVKAKIKDKEGIPPDQQRLIFAFRRLEDGRTLSDYNIQNKDTIHLL 331

Query: 283 PSPF----QIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFEN 338
              F    ++FVK + G  ITL V+P  T++ VK  + D+   PLHLQ ++FAGK+L   
Sbjct: 332 LHRFGTSMKVFVKAFTGNMITLQVEPSFTIESVKYMILDEEGVPLHLQELLFAGKQLDNG 391

Query: 339 HVLARYNIQKHSTLHMVLAP 358
           H L+ YNI+  +TL +   P
Sbjct: 392 HQLSHYNIKNENTLDLQFIP 411



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 177/330 (53%), Gaps = 20/330 (6%)

Query: 44  YGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQF 103
           Y I+   TLH + ++   M +F+K  T  T T+ +  P  T++NIK+ IQ K+ I  DQ 
Sbjct: 6   YNIKEGDTLHLVPRHAHHM-VFIKTATGNTITL-KVDPNDTIENIKSQIQAKKMIPIDQQ 63

Query: 104 TLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIR 163
            L+   +   +++ T++  NI+ ++I++L    +    I+++  +G++V  EV  +  + 
Sbjct: 64  KLITRYRKQLDNSLTLSDYNIEDKAILYLTHYLRSGTDIYIRTFSGKMVVFEVLPTDTVS 123

Query: 164 DVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTP 220
            +K ++    G+S+ D  + Y G++L+D+ TLA YD+  E +L++   F  ++ IF +T 
Sbjct: 124 YLKKMIRDKEGISSNDQTLFYAGQQLDDASTLANYDIPMESMLQLVTRFCPNMTIFAKTL 183

Query: 221 IEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKL-------EAC-----KTL 268
             + ++L V     V D+K  +  +  +    Q + + G +L       EA      KTL
Sbjct: 184 SGKTIKLNVNFSDTVSDIKRKIEEMEGIPCHEQKIIF-GQRLLGEDYIEEALSPGKIKTL 242

Query: 269 ASYGIKNNYVLD-VLPSPFQ-IFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQ 326
             + +K+  +L  + PS    + VK   GK I LD +P +T+++VK K+ DK   P   Q
Sbjct: 243 LDHNVKDGSILHLIFPSRASGVIVKFPAGKIIMLDTEPSDTIENVKAKIKDKEGIPPDQQ 302

Query: 327 SIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
            ++FA +RL +   L+ YNIQ   T+H++L
Sbjct: 303 RLIFAFRRLEDGRTLSDYNIQNKDTIHLLL 332



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 96/335 (28%), Positives = 168/335 (50%), Gaps = 30/335 (8%)

Query: 118 TMTSMNIKSESIIHLVFCPKEILS-IFVKAATGEIVNLEVKHSFAIRDVKAIVGS--VVG 174
           T    NIK    +HLV  P+     +F+K ATG  + L+V  +  I ++K+ + +  ++ 
Sbjct: 2   TFLHYNIKEGDTLHLV--PRHAHHMVFIKTATGNTITLKVDPNDTIENIKSQIQAKKMIP 59

Query: 175 VSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEV 231
           +     I  Y  K+L++S TL+ Y+++D+ +L +     S   I++RT   ++V  EV  
Sbjct: 60  IDQQKLITRYR-KQLDNSLTLSDYNIEDKAILYLTHYLRSGTDIYIRTFSGKMVVFEVLP 118

Query: 232 LIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVL----PSPFQ 287
              V  +K+++ +   +S  +Q LFYAG +L+   TLA+Y I    +L ++    P+   
Sbjct: 119 TDTVSYLKKMIRDKEGISSNDQTLFYAGQQLDDASTLANYDIPMESMLQLVTRFCPN-MT 177

Query: 288 IFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHV------- 340
           IF KT  GKTI L+V   +TV D+K K+ +    P H Q I+F  + L E+++       
Sbjct: 178 IFAKTLSGKTIKLNVNFSDTVSDIKRKIEEMEGIPCHEQKIIFGQRLLGEDYIEEALSPG 237

Query: 341 ----LARYNIQKHSTLHMVLA--PSSRIIELP---LIFIDPSISLSISISEVKEMAKVKF 391
               L  +N++  S LH++     S  I++ P   +I +D   S +I   + K   K   
Sbjct: 238 KIKTLLDHNVKDGSILHLIFPSRASGVIVKFPAGKIIMLDTEPSDTIENVKAKIKDKEGI 297

Query: 392 QAAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
               + L+     L+D RTL+DY +   + + L+ 
Sbjct: 298 PPDQQRLIFAFRRLEDGRTLSDYNIQNKDTIHLLL 332


>gi|28436485|gb|AAO43309.1| putative polyubiquitin [Arabidopsis thaliana]
          Length = 250

 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 96/240 (40%), Positives = 140/240 (58%), Gaps = 6/240 (2%)

Query: 123 NIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIM 182
           NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      +
Sbjct: 4   NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVQSSDTIDNVKAKIQDKEGIPPDQQRL 63

Query: 183 IYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVK 239
           I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +VK
Sbjct: 64  IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 123

Query: 240 EIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGK 296
             + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GK
Sbjct: 124 AKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 183

Query: 297 TITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           TITL+V+  +T+ +VK K+ DK   P   + ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 184 TITLEVESSDTIDNVKAKIQDKEGIPPDQKRLIFAGKQLEDGRTLAVYNIQKESTLHLVL 243



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 87/209 (41%), Positives = 123/209 (58%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 35  LEVQSSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 94

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KE I  DQ  L++ GK L ED  T+
Sbjct: 95  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQL-EDGRTL 152

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 153 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 212

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 213 KRLIFAGKQLEDGRTLAVYNIQKESTLHL 241



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 88/241 (36%), Positives = 132/241 (54%), Gaps = 5/241 (2%)

Query: 42  VDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSD 101
            DY I+  STLH + +    M++FVK  T +T T +E     T+ N+K  IQ KEGI  D
Sbjct: 1   ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT-LEVQSSDTIDNVKAKIQDKEGIPPD 59

Query: 102 QFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFA 161
           Q  L++ GK L ED  T+   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  
Sbjct: 60  QQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 118

Query: 162 IRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVR 218
           I +VKA +     +      +I+ GK+LED +TLA Y+++ E  L +       +QIFV+
Sbjct: 119 IDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 178

Query: 219 TPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYV 278
           T   + + LEVE    + +VK  + +   +    + L +AG +LE  +TLA Y I+    
Sbjct: 179 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQKRLIFAGKQLEDGRTLAVYNIQKEST 238

Query: 279 L 279
           L
Sbjct: 239 L 239



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/243 (34%), Positives = 123/243 (50%), Gaps = 12/243 (4%)

Query: 196 AFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGN 252
           A Y+++ E  L +       +QIFV+T   + + LEV+    + +VK  + +   +    
Sbjct: 1   ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVQSSDTIDNVKAKIQDKEGIPPDQ 60

Query: 253 QDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQ 309
           Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ 
Sbjct: 61  QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 120

Query: 310 DVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIF 369
           +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +       
Sbjct: 121 NVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 180

Query: 370 IDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVV 423
              +I+L +  S+  +  K K Q         K L+     L+D RTLA Y +     + 
Sbjct: 181 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQKRLIFAGKQLEDGRTLAVYNIQKESTLH 240

Query: 424 LVF 426
           LV 
Sbjct: 241 LVL 243


>gi|297809843|ref|XP_002872805.1| hypothetical protein ARALYDRAFT_490270 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297318642|gb|EFH49064.1| hypothetical protein ARALYDRAFT_490270 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 309

 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/263 (39%), Positives = 150/263 (57%), Gaps = 8/263 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDK 318
           KTITL+V+  +T+ +VK K+ DK
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDK 261



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/243 (40%), Positives = 141/243 (58%), Gaps = 6/243 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVK 239
           +VK
Sbjct: 253 NVK 255



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/259 (37%), Positives = 142/259 (54%), Gaps = 6/259 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ 392
           I+L +  S+  +  K K Q
Sbjct: 241 ITLEVESSDTIDNVKAKIQ 259



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 116/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223


>gi|149063232|gb|EDM13555.1| rCG21222, isoform CRA_a [Rattus norvegicus]
 gi|149063234|gb|EDM13557.1| rCG21222, isoform CRA_a [Rattus norvegicus]
          Length = 278

 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/244 (40%), Positives = 146/244 (59%), Gaps = 6/244 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE  +  +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVNTK 252

Query: 237 DVKE 240
            VK+
Sbjct: 253 KVKQ 256



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 100/257 (38%), Positives = 147/257 (57%), Gaps = 8/257 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVK 312
           KTITLDV+P    + VK
Sbjct: 239 KTITLDVEPSVNTKKVK 255



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/223 (39%), Positives = 132/223 (59%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 118/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223


>gi|124784679|gb|ABN14988.1| polyubiquitin [Taenia asiatica]
          Length = 251

 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 95/251 (37%), Positives = 146/251 (58%), Gaps = 7/251 (2%)

Query: 78  EAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPK 137
           E  P  +++N+K  IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV   +
Sbjct: 1   EVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLR 59

Query: 138 EILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAF 197
             + IFVK  TG+ + LEV+ S +I +VKA +    G+      +I+ GK+LED +TL+ 
Sbjct: 60  GGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 119

Query: 198 YDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQD 254
           Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q 
Sbjct: 120 YNIQKESTLHLVLRMRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 179

Query: 255 LFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDV 311
           L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +++++V
Sbjct: 180 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENV 239

Query: 312 KVKLFDKLQTP 322
           K K+ DK   P
Sbjct: 240 KAKIPDKEGIP 250



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/242 (40%), Positives = 144/242 (59%), Gaps = 6/242 (2%)

Query: 2   KVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLS 60
           +V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +   
Sbjct: 1   EVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 60

Query: 61  EMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMT 120
            M++FVK  T +T T +E  P  +++N+K  IQ KEGI  DQ  L++ GK L ED  T++
Sbjct: 61  GMQIFVKTLTGKTIT-LEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLS 118

Query: 121 SMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADH 180
             NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+     
Sbjct: 119 DYNIQKESTLHLVLRMRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 178

Query: 181 IMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRD 237
            +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +
Sbjct: 179 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIEN 238

Query: 238 VK 239
           VK
Sbjct: 239 VK 240



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 80/208 (38%), Positives = 123/208 (59%), Gaps = 6/208 (2%)

Query: 155 EVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPS 211
           EV+ S +I +VKA +    G+      +I+ GK+LED +TL+ Y+++ E  L +      
Sbjct: 1   EVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 60

Query: 212 SIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASY 271
            +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y
Sbjct: 61  GMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 120

Query: 272 GIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSI 328
            I+    L +   +    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q +
Sbjct: 121 NIQKESTLHLVLRMRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 180

Query: 329 VFAGKRLFENHVLARYNIQKHSTLHMVL 356
           +FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 IFAGKQLEDGRTLSDYNIQKESTLHLVL 208



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 77/176 (43%), Positives = 109/176 (61%), Gaps = 3/176 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 76  LEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRMR 135

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 136 GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 193

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGV 175
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S +I +VKA +    G+
Sbjct: 194 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIPDKEGI 249



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 108/208 (51%), Gaps = 9/208 (4%)

Query: 228 EVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPS 284
           EVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L  
Sbjct: 1   EVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 60

Query: 285 PFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARY 344
             QIFVKT  GKTITL+V+P +++++VK K+ DK   P   Q ++FAGK+L +   L+ Y
Sbjct: 61  GMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 120

Query: 345 NIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKEL 398
           NIQK STLH+VL     +          +I+L +  S+  E  K K Q         + L
Sbjct: 121 NIQKESTLHLVLRMRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 180

Query: 399 LVDQVALQDDRTLADYGMDLSEKVVLVF 426
           +     L+D RTL+DY +     + LV 
Sbjct: 181 IFAGKQLEDGRTLSDYNIQKESTLHLVL 208


>gi|163573|gb|AAA30719.1| polyubiquitin, partial [Bos taurus]
          Length = 245

 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 92/243 (37%), Positives = 140/243 (57%), Gaps = 6/243 (2%)

Query: 130 IHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKL 189
           +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+L
Sbjct: 2   LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 61

Query: 190 EDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANII 246
           ED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +  
Sbjct: 62  EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 121

Query: 247 DLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQ 303
            +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+
Sbjct: 122 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 181

Query: 304 PYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRII 363
           P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     ++
Sbjct: 182 PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGVL 241

Query: 364 ELP 366
             P
Sbjct: 242 SSP 244



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 128/209 (61%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 26  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 85

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 86  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 143

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 144 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 203

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 204 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 232



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 90/247 (36%), Positives = 136/247 (55%), Gaps = 13/247 (5%)

Query: 51  TLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGK 110
           TLH + +    M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK
Sbjct: 1   TLHLVLRLRGGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 59

Query: 111 LLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVG 170
            L ED  T++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA + 
Sbjct: 60  QL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQ 118

Query: 171 SVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRL 227
              G+      +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L
Sbjct: 119 DKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL 178

Query: 228 EVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL-------- 279
           EVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L        
Sbjct: 179 EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 238

Query: 280 DVLPSPF 286
            VL SPF
Sbjct: 239 GVLSSPF 245



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/225 (35%), Positives = 118/225 (52%), Gaps = 9/225 (4%)

Query: 211 SSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLAS 270
             +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ 
Sbjct: 10  GGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 69

Query: 271 YGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQS 327
           Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q 
Sbjct: 70  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 129

Query: 328 IVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMA 387
           ++FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  
Sbjct: 130 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 189

Query: 388 KVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 190 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 234



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 178 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 233


>gi|357513727|ref|XP_003627152.1| Ubiquitin [Medicago truncatula]
 gi|355521174|gb|AET01628.1| Ubiquitin [Medicago truncatula]
          Length = 270

 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 109/301 (36%), Positives = 153/301 (50%), Gaps = 43/301 (14%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+                                   +   LA YNIQK STLH+V
Sbjct: 239 KTITLE-----------------------------------DGRTLADYNIQKESTLHLV 263

Query: 356 L 356
           L
Sbjct: 264 L 264



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 104/293 (35%), Positives = 149/293 (50%), Gaps = 35/293 (11%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL                 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR---------------- 224

Query: 374 ISLSISISEVKEMAKVKFQAAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
                         +   Q  VK L    + L+D RTLADY +     + LV 
Sbjct: 225 -------------LRGGMQIFVKTLTGKTITLEDGRTLADYNIQKESTLHLVL 264



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 95/232 (40%), Positives = 135/232 (58%), Gaps = 6/232 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLE 228
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LE
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 244


>gi|5912028|emb|CAB55973.1| hypothetical protein [Homo sapiens]
          Length = 239

 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 91/233 (39%), Positives = 137/233 (58%), Gaps = 6/233 (2%)

Query: 130 IHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKL 189
           +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+L
Sbjct: 1   LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 60

Query: 190 EDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANII 246
           ED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +  
Sbjct: 61  EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 120

Query: 247 DLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQ 303
            +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+
Sbjct: 121 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 180

Query: 304 PYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 233



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 128/209 (61%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 25  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 84

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 85  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 142

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 143 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 202

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 203 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 231



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/231 (36%), Positives = 130/231 (56%), Gaps = 5/231 (2%)

Query: 52  LHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKL 111
           LH + +    M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK 
Sbjct: 1   LHLVLRLRGGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ 59

Query: 112 LKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGS 171
           L ED  T++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +  
Sbjct: 60  L-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD 118

Query: 172 VVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLE 228
             G+      +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LE
Sbjct: 119 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 178

Query: 229 VEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           VE    + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 229



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/225 (35%), Positives = 118/225 (52%), Gaps = 9/225 (4%)

Query: 211 SSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLAS 270
             +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ 
Sbjct: 9   GGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 68

Query: 271 YGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQS 327
           Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q 
Sbjct: 69  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 128

Query: 328 IVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMA 387
           ++FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  
Sbjct: 129 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 188

Query: 388 KVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 189 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 233



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 177 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 232


>gi|399217583|emb|CCF74470.1| unnamed protein product [Babesia microti strain RI]
          Length = 282

 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 93/243 (38%), Positives = 140/243 (57%), Gaps = 13/243 (5%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +       IDPS
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGV-------IDPS 233

Query: 374 ISL 376
           ++L
Sbjct: 234 LAL 236



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 128/209 (61%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 91/264 (34%), Positives = 143/264 (54%), Gaps = 15/264 (5%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVLPSPFQIFVKTWGG--- 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+         S   + ++  GG   
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE-------STLHLVLRLRGGVID 231

Query: 296 KTITLDVQPYNTVQDVKVKLFDKL 319
            ++ L  Q YN  + V  K + +L
Sbjct: 232 PSLALLAQKYNCNKMVCRKCYARL 255



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 118/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|340382024|ref|XP_003389521.1| PREDICTED: polyubiquitin-like, partial [Amphimedon queenslandica]
          Length = 921

 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 113/375 (30%), Positives = 188/375 (50%), Gaps = 19/375 (5%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLF--FAGDRLEAGRLVDYGIRNNSTLHFLHQN 58
           +KV  ++ I+N+K+ I  KE I  D   LF  +      +  L+ Y I +N+TL+  H  
Sbjct: 409 LKVDPNDTIENVKSQIRDKESIELDQQKLFTRYCNQLDNSLTLLHYNIGHNATLYLSHYP 468

Query: 59  LSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
                ++++  T +   V+E +P  T+ N+K MI+ KE I  D  TL Y G+ L +D +T
Sbjct: 469 RGGANIYIRTFTGK-MIVIEVLPTDTISNLKKMIRDKEKISPDNQTLFYAGRQL-DDAST 526

Query: 119 MTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAA 178
           + + +I  ESI+ LV      + + VK  +GE + L V  S  I D+KA +  + G+   
Sbjct: 527 LANYDIPMESILQLVTSFNPTMKVSVKLLSGEKMELNVNFSDTISDIKAKIEEIQGIPCN 586

Query: 179 DHIMIYEGKKLEDS-----------KTLAFYDMKDECLLEM--FPSSIQIFVRTPIEEIV 225
              +++  K+LED            KTL  +++ D   + +      + IF++ P    +
Sbjct: 587 RQKIMFAKKRLEDDYVEKVLSPNKIKTLIDHNITDGSTMHLIFLRGGMTIFIKLPSGRTI 646

Query: 226 RLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVLPS- 284
             EV+    ++ +K  + +   LS   Q L +A  +LE   TL+ Y I+    + +L S 
Sbjct: 647 SFEVDPSDTIKTIKYKIQDKEKLSPNQQRLIFAFKRLEDHYTLSDYNIQKEDTMHLLDSS 706

Query: 285 -PFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLAR 343
            P QIFVK   G+T  L V    T++ VK  +  +   P +LQ ++FA KRL + H L+ 
Sbjct: 707 LPMQIFVKAIIGETFALQVDSCCTIETVKYMILYEKGIPPYLQKLLFASKRLEDCHTLSY 766

Query: 344 YNIQKHSTLHMVLAP 358
           YNI+  +TL +   P
Sbjct: 767 YNIKNQNTLDLQFIP 781



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 191/366 (52%), Gaps = 23/366 (6%)

Query: 9   IKNLKAMIHVKEGISEDICDLFFAGDRLEAGRLVDY-GIRNNSTLHFLHQNLSEMKLFVK 67
           I++LK +I  K  I     +L  AG +L  GR   Y  I    TLH + Q  ++  +FVK
Sbjct: 342 IESLKTIIETKTSIPCSEQNLILAGKQLSFGRTFSYYNITEGDTLHLV-QRHADCTIFVK 400

Query: 68  IPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLV--YDGKLLKEDTATMTSMNIK 125
             T Q    ++  P  T++N+K+ I+ KE I+ DQ  L   Y  +L  +++ T+   NI 
Sbjct: 401 TETGQ-MIALKVDPNDTIENVKSQIRDKESIELDQQKLFTRYCNQL--DNSLTLLHYNIG 457

Query: 126 SESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYE 185
             + ++L   P+   +I+++  TG+++ +EV  +  I ++K ++     +S  +  + Y 
Sbjct: 458 HNATLYLSHYPRGGANIYIRTFTGKMIVIEVLPTDTISNLKKMIRDKEKISPDNQTLFYA 517

Query: 186 GKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIV 242
           G++L+D+ TLA YD+  E +L++   F  ++++ V+    E + L V     + D+K  +
Sbjct: 518 GRQLDDASTLANYDIPMESILQLVTSFNPTMKVSVKLLSGEKMELNVNFSDTISDIKAKI 577

Query: 243 ANIIDLSLGNQDLFYAGTKLE-----------ACKTLASYGIKNNYVLDV--LPSPFQIF 289
             I  +    Q + +A  +LE             KTL  + I +   + +  L     IF
Sbjct: 578 EEIQGIPCNRQKIMFAKKRLEDDYVEKVLSPNKIKTLIDHNITDGSTMHLIFLRGGMTIF 637

Query: 290 VKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKH 349
           +K   G+TI+ +V P +T++ +K K+ DK +   + Q ++FA KRL +++ L+ YNIQK 
Sbjct: 638 IKLPSGRTISFEVDPSDTIKTIKYKIQDKEKLSPNQQRLIFAFKRLEDHYTLSDYNIQKE 697

Query: 350 STLHMV 355
            T+H++
Sbjct: 698 DTMHLL 703



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 127/439 (28%), Positives = 211/439 (48%), Gaps = 17/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAG-RLVDYGIRNNSTLHFLHQNL 59
           ++V++++ I+N+K  I  KEGI  +   L F G +LE G  L DY I+  STL  L    
Sbjct: 106 LEVERTDSIENVKIKIQEKEGIPPNQQRLVFDGRQLEDGPTLSDYRIQKESTLLLLLCVQ 165

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK         +E  P  T++ +K  IQ + G   D   L  D K L ED  T+
Sbjct: 166 GGMQIFVKQTLTNKIFTLEVEPSDTIKTVKAKIQKELGDPPDYQELKLDDKQL-EDGHTL 224

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +   ++ ES++ L    +  + IFVKA T + + LEV  S  I +VKA +    G+    
Sbjct: 225 SDYKVQKESMLELSPLLEVSMKIFVKAFTFKTITLEVNRSDTIENVKAKILHEKGIQPDQ 284

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLE-MFPSSIQIFVRTPIEEIV-RLEVEVLIVVRD 237
             +I+ GK+LED   L+ Y +++E  L  + P  I I ++    +++  + +   + +  
Sbjct: 285 QKLIFNGKRLEDGCKLSNYFIQNEATLNLLLPEDISINIKVVNGQVLTSVYISPDLNIES 344

Query: 238 VKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVLP--SPFQIFVKTWGG 295
           +K I+     +    Q+L  AG +L   +T + Y I     L ++   +   IFVKT  G
Sbjct: 345 LKTIIETKTSIPCSEQNLILAGKQLSFGRTFSYYNITEGDTLHLVQRHADCTIFVKTETG 404

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHV-LARYNIQKHSTLHM 354
           + I L V P +T+++VK ++ DK    L  Q +        +N + L  YNI  ++TL++
Sbjct: 405 QMIALKVDPNDTIENVKSQIRDKESIELDQQKLFTRYCNQLDNSLTLLHYNIGHNATLYL 464

Query: 355 VLAPSS------RIIELPLIFIDPSISLSISISEVKEM--AKVKFQAAVKELLVDQVALQ 406
              P        R     +I I+  +  + +IS +K+M   K K     + L      L 
Sbjct: 465 SHYPRGGANIYIRTFTGKMIVIE--VLPTDTISNLKKMIRDKEKISPDNQTLFYAGRQLD 522

Query: 407 DDRTLADYGMDLSEKVVLV 425
           D  TLA+Y + +   + LV
Sbjct: 523 DASTLANYDIPMESILQLV 541



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/262 (31%), Positives = 141/262 (53%), Gaps = 10/262 (3%)

Query: 106 VYDGKLLK-EDTATMTSMNIKSE-SIIHLVF-CPKEILSIFVKAATGEIVNLEVKHSFAI 162
           +YDGK    +D  T++   I+ E +IIHLV    +  + IF+K  TG+ + LEV+ + +I
Sbjct: 55  IYDGKFKTLKDGHTLSYYGIQKEGTIIHLVLPLHRSSMIIFLKTLTGKTITLEVERTDSI 114

Query: 163 RDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDEC---LLEMFPSSIQIFVR- 218
            +VK  +    G+      ++++G++LED  TL+ Y ++ E    LL      +QIFV+ 
Sbjct: 115 ENVKIKIQEKEGIPPNQQRLVFDGRQLEDGPTLSDYRIQKESTLLLLLCVQGGMQIFVKQ 174

Query: 219 TPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYV 278
           T   +I  LEVE    ++ VK  +   +      Q+L     +LE   TL+ Y ++   +
Sbjct: 175 TLTNKIFTLEVEPSDTIKTVKAKIQKELGDPPDYQELKLDDKQLEDGHTLSDYKVQKESM 234

Query: 279 LDVLP---SPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRL 335
           L++ P      +IFVK +  KTITL+V   +T+++VK K+  +       Q ++F GKRL
Sbjct: 235 LELSPLLEVSMKIFVKAFTFKTITLEVNRSDTIENVKAKILHEKGIQPDQQKLIFNGKRL 294

Query: 336 FENHVLARYNIQKHSTLHMVLA 357
            +   L+ Y IQ  +TL+++L 
Sbjct: 295 EDGCKLSNYFIQNEATLNLLLP 316



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/169 (32%), Positives = 92/169 (54%), Gaps = 20/169 (11%)

Query: 262 LEACKTLASYGIKN-----NYVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLF 316
           L+   TL+ YGI+      + VL +  S   IF+KT  GKTITL+V+  +++++VK+K+ 
Sbjct: 63  LKDGHTLSYYGIQKEGTIIHLVLPLHRSSMIIFLKTLTGKTITLEVERTDSIENVKIKIQ 122

Query: 317 DKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSI-- 374
           +K   P + Q +VF G++L +   L+ Y IQK STL ++L     +     IF+  ++  
Sbjct: 123 EKEGIPPNQQRLVFDGRQLEDGPTLSDYRIQKESTLLLLLCVQGGM----QIFVKQTLTN 178

Query: 375 ---SLSISISEVKEMAKVKFQAAV------KELLVDQVALQDDRTLADY 414
              +L +  S+  +  K K Q  +      +EL +D   L+D  TL+DY
Sbjct: 179 KIFTLEVEPSDTIKTVKAKIQKELGDPPDYQELKLDDKQLEDGHTLSDY 227


>gi|37595366|gb|AAQ94569.1| ubiquitin C [Danio rerio]
          Length = 235

 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 93/223 (41%), Positives = 135/223 (60%), Gaps = 6/223 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKPLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRT 219
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKT 235



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 87/223 (39%), Positives = 131/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVK   GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKPLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 88/237 (37%), Positives = 133/237 (56%), Gaps = 8/237 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+    + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKPLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKT 292
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKT 235



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/227 (36%), Positives = 123/227 (54%), Gaps = 17/227 (7%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDP----SISLSISISEVKE 385
           FAGK+L +   L+ YNIQK STLH+VL    R+     IF+ P    +I+L +  S+  E
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL----RLRGGMQIFVKPLTGKTITLEVEPSDTIE 176

Query: 386 MAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
             K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223


>gi|225711930|gb|ACO11811.1| Ubiquitin [Lepeophtheirus salmonis]
          Length = 229

 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 88/223 (39%), Positives = 132/223 (59%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKEPTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEGGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 85/209 (40%), Positives = 125/209 (59%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+   TLH + +  
Sbjct: 15  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEPTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L E   T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EGGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/223 (34%), Positives = 116/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKEPTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L     L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEGGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 62/135 (45%), Positives = 85/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEGGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 209 SDYNIQKESTLHLVL 223


>gi|325302882|tpg|DAA34473.1| TPA_exp: ubiquitin [Amblyomma variegatum]
          Length = 241

 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 93/223 (41%), Positives = 135/223 (60%), Gaps = 6/223 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 16  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 75

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 76  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 133

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 134 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 193

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRT 219
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T
Sbjct: 194 QRLIFAGKQLEDGRTLSDYNIQKESTLHLGLRLRGGMQIFVKT 236



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 87/223 (39%), Positives = 131/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 2   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 61

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 62  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 121

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 122 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 181

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+ L
Sbjct: 182 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLGL 224



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/243 (37%), Positives = 138/243 (56%), Gaps = 8/243 (3%)

Query: 61  EMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMT 120
           +M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++
Sbjct: 1   KMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLS 58

Query: 121 SMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADH 180
             NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+     
Sbjct: 59  DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 118

Query: 181 IMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRD 237
            +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +
Sbjct: 119 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIEN 178

Query: 238 VKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWG 294
           VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  
Sbjct: 179 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLGLRLRGGMQIFVKTLT 238

Query: 295 GKT 297
           GKT
Sbjct: 239 GKT 241



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/211 (36%), Positives = 114/211 (54%), Gaps = 9/211 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 2   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 61

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 62  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 121

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 122 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 181

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADY 414
           K Q         + L+     L+D RTL+DY
Sbjct: 182 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 212



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 80/147 (54%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 2   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 61

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 62  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 121

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 122 FAGKQLEDGRTLSDYNIQKESTLHLVL 148



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 34/74 (45%), Positives = 46/74 (62%), Gaps = 1/74 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH   +  
Sbjct: 168 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLGLRLR 227

Query: 60  SEMKLFVKIPTNQT 73
             M++FVK  T +T
Sbjct: 228 GGMQIFVKTLTGKT 241


>gi|290462837|gb|ADD24466.1| Ubiquitin [Lepeophtheirus salmonis]
          Length = 229

 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 88/223 (39%), Positives = 132/223 (59%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/209 (41%), Positives = 127/209 (60%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 81/221 (36%), Positives = 125/221 (56%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 78/223 (34%), Positives = 117/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|66358028|ref|XP_626192.1| polyubiquitin with 3 Ub domains [Cryptosporidium parvum Iowa II]
 gi|46227264|gb|EAK88214.1| polyubiquitin with 3 Ub domains [Cryptosporidium parvum Iowa II]
          Length = 241

 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 91/235 (38%), Positives = 137/235 (58%), Gaps = 7/235 (2%)

Query: 129 IIHLVFCPKEI-LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGK 187
           +I+   C K   + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK
Sbjct: 1   LIYYRDCSKNTNMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 60

Query: 188 KLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVAN 244
           +LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +
Sbjct: 61  QLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD 120

Query: 245 IIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLD 301
              +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+
Sbjct: 121 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 180

Query: 302 VQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 235



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 128/209 (61%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 27  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 86

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 87  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 144

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 145 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 204

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 205 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 233



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 127/223 (56%), Gaps = 5/223 (2%)

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
           + M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 11  TNMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 68

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 69  SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 128

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 129 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 188

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 189 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 231



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 79/225 (35%), Positives = 120/225 (53%), Gaps = 9/225 (4%)

Query: 211 SSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLAS 270
           +++QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ 
Sbjct: 11  TNMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 70

Query: 271 YGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQS 327
           Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q 
Sbjct: 71  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 130

Query: 328 IVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMA 387
           ++FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  
Sbjct: 131 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 190

Query: 388 KVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 191 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 235



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 179 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 234


>gi|297809725|ref|XP_002872746.1| hypothetical protein ARALYDRAFT_911794 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297809771|ref|XP_002872769.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297318583|gb|EFH49005.1| hypothetical protein ARALYDRAFT_911794 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297318606|gb|EFH49028.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 229

 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 91/223 (40%), Positives = 131/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   PL  Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPLDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 124/209 (59%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPLDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 84/221 (38%), Positives = 124/221 (56%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   + L  Q L +AG +LE  +TLA Y I+    L
Sbjct: 179 KAKIQDKEGIPLDQQRLIFAGKQLEDGRTLADYNIQKESTL 219



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 116/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 390 KFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 181 KIQDKEGIPLDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVESSDTIDNVKAKIQDKEGIPLDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222


>gi|226477450|emb|CAX72419.1| polyubiquitin [Schistosoma japonicum]
          Length = 245

 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 93/223 (41%), Positives = 135/223 (60%), Gaps = 6/223 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRT 219
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKT 235



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/223 (39%), Positives = 132/223 (59%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/245 (38%), Positives = 139/245 (56%), Gaps = 8/245 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITL 300
           KTIT 
Sbjct: 239 KTITF 243



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 118/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 1/76 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTAT 75
             M++FVK  T +T T
Sbjct: 227 GGMQIFVKTLTGKTIT 242


>gi|164510092|emb|CAJ32650.1| ubiquitin [Mytilus edulis]
          Length = 228

 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 89/223 (39%), Positives = 131/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED  TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQSLIFAGKQLEDGSTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLSGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQSLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE   TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGSTLSDYNIQKESTLHLVLRLSGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   QS++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQSLMFAGKQLEDGSTLSDYNIQKESTLHLVL 223



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 86/209 (41%), Positives = 127/209 (60%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE G  L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQSLIFAGKQLEDGSTLSDYNIQKESTLHLVLRLS 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ +L++ GK L ED +T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQSLIFAGKQL-EDGSTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV      + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLSGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +++ GK+LED  TL+ Y+++ E  L +
Sbjct: 193 QSLMFAGKQLEDGSTLSDYNIQKESTLHL 221



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 125/221 (56%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ +L++ GK L ED +T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQSLIFAGKQL-EDGSTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV      + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLSGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQS 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED  TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGSTLSDYNIQKESTLHLVLRLSGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE   TL+ Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQSLMFAGKQLEDGSTLSDYNIQKESTL 219



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 118/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE   TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQSLIFAGKQLEDGSTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   QS++
Sbjct: 61  IQKESTLHLVLRLSGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQSLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL  S  +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGSTLSDYNIQKESTLHLVLRLSGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D  TL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQSLMFAGKQLEDGSTLSDYNIQKESTLHLVL 223



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE G  L DY I+  STLH +
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQSLMFAGKQLEDGSTLSDYNIQKESTLHLV 222


>gi|156087036|ref|XP_001610925.1| polyubiquitin [Babesia bovis T2Bo]
 gi|154798178|gb|EDO07357.1| polyubiquitin, putative [Babesia bovis]
          Length = 233

 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 90/233 (38%), Positives = 137/233 (58%), Gaps = 7/233 (3%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLA-PSSRIIEL 365
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     ++IE+
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGKVIEI 233



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 128/209 (61%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/240 (35%), Positives = 133/240 (55%), Gaps = 12/240 (5%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVLPSPFQIFVKTWGGKTI 298
           K  + +   +    Q L +AG +LE  +TL+ Y I+         S   + ++  GGK I
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE-------STLHLVLRLRGGKVI 231



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 118/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|225709684|gb|ACO10688.1| Ubiquitin [Caligus rogercresseyi]
          Length = 229

 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 88/223 (39%), Positives = 132/223 (59%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKTKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKT 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 128/209 (61%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKTKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/221 (36%), Positives = 124/221 (56%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKTKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 118/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKTKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKT 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVEPSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|355568283|gb|EHH24564.1| Polyubiquitin-C [Macaca mulatta]
          Length = 229

 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 88/223 (39%), Positives = 132/223 (59%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLSGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 127/209 (60%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV      + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLSGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 126/221 (57%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLSGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 119/223 (53%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL  S  +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLSGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|158753|gb|AAA28997.1| ubiquitin [Drosophila melanogaster]
          Length = 231

 Score =  154 bits (389), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 88/223 (39%), Positives = 132/223 (59%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 128/209 (61%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 126/221 (57%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 118/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|213510698|ref|NP_001133175.1| polyubiquitin [Salmo salar]
 gi|350534516|ref|NP_001232808.1| uncharacterized protein LOC100228572 [Taeniopygia guttata]
 gi|118098426|ref|XP_415105.2| PREDICTED: polyubiquitin-B isoform 2 [Gallus gallus]
 gi|118098428|ref|XP_001233377.1| PREDICTED: polyubiquitin-B isoform 1 [Gallus gallus]
 gi|432884643|ref|XP_004074520.1| PREDICTED: polyubiquitin-B-like isoform 1 [Oryzias latipes]
 gi|432884645|ref|XP_004074521.1| PREDICTED: polyubiquitin-B-like isoform 2 [Oryzias latipes]
 gi|432884647|ref|XP_004074522.1| PREDICTED: polyubiquitin-B-like isoform 3 [Oryzias latipes]
 gi|432884649|ref|XP_004074523.1| PREDICTED: polyubiquitin-B-like isoform 4 [Oryzias latipes]
 gi|449476588|ref|XP_004176460.1| PREDICTED: polyubiquitin-B [Taeniopygia guttata]
 gi|104829|pir||S13928 ubiquitin precursor - chicken
 gi|533889|gb|AAA29362.1| polyubiquitin [Anopheles gambiae]
 gi|197129058|gb|ACH45556.1| putative ubiquitin C variant 4 [Taeniopygia guttata]
 gi|197632335|gb|ACH70891.1| polyubiquitin [Salmo salar]
 gi|223647274|gb|ACN10395.1| Ubiquitin [Salmo salar]
 gi|223673153|gb|ACN12758.1| Ubiquitin [Salmo salar]
 gi|449279318|gb|EMC86953.1| Ubiquitin [Columba livia]
          Length = 229

 Score =  154 bits (389), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 88/223 (39%), Positives = 132/223 (59%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 128/209 (61%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 126/221 (57%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 118/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|195469924|ref|XP_002099886.1| GE16472 [Drosophila yakuba]
 gi|194187410|gb|EDX00994.1| GE16472 [Drosophila yakuba]
          Length = 230

 Score =  154 bits (389), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 88/223 (39%), Positives = 132/223 (59%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 128/209 (61%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 126/221 (57%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 118/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|289740633|gb|ADD19064.1| ubiquitin/40S ribosomal protein S27a fusion protein [Glossina
           morsitans morsitans]
          Length = 229

 Score =  154 bits (389), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 88/223 (39%), Positives = 132/223 (59%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 128/209 (61%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 126/221 (57%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 118/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|339233016|ref|XP_003381625.1| ubiquitin family protein [Trichinella spiralis]
 gi|316979538|gb|EFV62321.1| ubiquitin family protein [Trichinella spiralis]
          Length = 258

 Score =  154 bits (389), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 93/245 (37%), Positives = 140/245 (57%), Gaps = 8/245 (3%)

Query: 120 TSMNIKS--ESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSA 177
           TS ++KS  E  +HL       + IFVK  TG+ + LEV+ S  I +VK  +    G+  
Sbjct: 11  TSFSLKSIQERYVHLSNRIHRKMQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPP 70

Query: 178 ADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIV 234
               +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    
Sbjct: 71  DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 130

Query: 235 VRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVK 291
           + +VK  + +   +    Q L +AG +LE  + L+ Y I+    L +   L    QIFVK
Sbjct: 131 IENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRMLSDYNIQKESTLHLVLRLRGGMQIFVK 190

Query: 292 TWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHST 351
           T  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK ST
Sbjct: 191 TLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 250

Query: 352 LHMVL 356
           LH+VL
Sbjct: 251 LHLVL 255



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 85/209 (40%), Positives = 126/209 (60%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 47  LEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 106

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K+ IQ KEGI  DQ  L++ GK L ED   +
Sbjct: 107 GGMQIFVKTLTGKTIT-LEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRML 164

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 165 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQ 224

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 225 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 253



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 81/231 (35%), Positives = 130/231 (56%), Gaps = 5/231 (2%)

Query: 52  LHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKL 111
           +H  ++   +M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK 
Sbjct: 23  VHLSNRIHRKMQIFVKTLTGKTITL-EVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQ 81

Query: 112 LKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGS 171
           L ED  T++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +  
Sbjct: 82  L-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQD 140

Query: 172 VVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLE 228
             G+      +I+ GK+LED + L+ Y+++ E  L +       +QIFV+T   + + LE
Sbjct: 141 KEGIPPDQQRLIFAGKQLEDGRMLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 200

Query: 229 VEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           VE    + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 201 VEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 251



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 119/223 (53%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 33  MQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 92

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 93  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLI 152

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +  +L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 153 FAGKQLEDGRMLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKG 212

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 213 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 255



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 60/135 (44%), Positives = 86/135 (63%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGRLV-DYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K+ I  KEGI  D   L FAG +LE GR++ DY I+  STLH + +  
Sbjct: 123 LEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRMLSDYNIQKESTLHLVLRLR 182

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 183 GGMQIFVKTLTGKTIT-LEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 240

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 241 SDYNIQKESTLHLVL 255


>gi|256072199|ref|XP_002572424.1| ubiquitin (ribosomal protein L40) [Schistosoma mansoni]
 gi|164510084|emb|CAJ32646.1| ubiquitin [Xantho incisus]
 gi|226473060|emb|CAX71216.1| polyubiquitin [Schistosoma japonicum]
          Length = 228

 Score =  154 bits (389), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 88/223 (39%), Positives = 132/223 (59%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 128/209 (61%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 126/221 (57%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 118/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|67616274|ref|XP_667472.1| ubiquitin B [Cryptosporidium hominis TU502]
 gi|54658618|gb|EAL37248.1| ubiquitin B [Cryptosporidium hominis]
          Length = 229

 Score =  154 bits (389), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 88/223 (39%), Positives = 132/223 (59%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 128/209 (61%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 126/221 (57%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 118/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|16191634|emb|CAC94926.1| putative ubiquitin [Pleurotus sp. 'Florida']
          Length = 243

 Score =  154 bits (389), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 97/238 (40%), Positives = 138/238 (57%), Gaps = 6/238 (2%)

Query: 6   SEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKL 64
           S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +    M++
Sbjct: 1   SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 60

Query: 65  FVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNI 124
           FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T++  NI
Sbjct: 61  FVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNI 118

Query: 125 KSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIY 184
           + ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+
Sbjct: 119 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 178

Query: 185 EGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVK 239
            GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +VK
Sbjct: 179 AGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 236



 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 90/237 (37%), Positives = 136/237 (57%), Gaps = 7/237 (2%)

Query: 84  TVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIF 143
           T+ N+K  IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV   +  + IF
Sbjct: 3   TIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIF 61

Query: 144 VKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDE 203
           VK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+++ E
Sbjct: 62  VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 121

Query: 204 CLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGT 260
             L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG 
Sbjct: 122 STLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK 181

Query: 261 KLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVK 314
           +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK +
Sbjct: 182 QLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAR 238



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 78/204 (38%), Positives = 117/204 (57%), Gaps = 6/204 (2%)

Query: 159 SFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQI 215
           S  I +VKA +    G+      +I+ GK+LED +TL+ Y+++ E  L +       +QI
Sbjct: 1   SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 60

Query: 216 FVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKN 275
           FV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y I+ 
Sbjct: 61  FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 120

Query: 276 NYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAG 332
              L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAG
Sbjct: 121 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG 180

Query: 333 KRLFENHVLARYNIQKHSTLHMVL 356
           K+L +   L+ YNIQK STLH+VL
Sbjct: 181 KQLEDGRTLSDYNIQKESTLHLVL 204



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 75/168 (44%), Positives = 102/168 (60%), Gaps = 3/168 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 72  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 131

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 132 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 189

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKA 167
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA
Sbjct: 190 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 237



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/183 (36%), Positives = 96/183 (52%), Gaps = 9/183 (4%)

Query: 253 QDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQ 309
           Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ 
Sbjct: 22  QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 81

Query: 310 DVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIF 369
           +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +       
Sbjct: 82  NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 141

Query: 370 IDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVV 423
              +I+L +  S+  +  K K Q         + L+     L+D RTL+DY +     + 
Sbjct: 142 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 201

Query: 424 LVF 426
           LV 
Sbjct: 202 LVL 204


>gi|49586|emb|CAA30815.1| unnamed protein product [Cricetulus sp.]
          Length = 223

 Score =  154 bits (389), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 88/223 (39%), Positives = 132/223 (59%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 128/209 (61%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 126/221 (57%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 118/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|308809920|ref|XP_003082269.1| polyubiquitin (ISS) [Ostreococcus tauri]
 gi|116060737|emb|CAL57215.1| polyubiquitin (ISS) [Ostreococcus tauri]
          Length = 288

 Score =  154 bits (389), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 103/274 (37%), Positives = 152/274 (55%), Gaps = 15/274 (5%)

Query: 96  EGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLE 155
           +GI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +  + IFVK  TG+ + LE
Sbjct: 10  DGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 68

Query: 156 VKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSS 212
           V+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+++ E  L +       
Sbjct: 69  VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 128

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 129 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 188

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 189 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 248

Query: 330 FAGKRLFEN-HV-----LARYNIQKHSTLHMVLA 357
           FAGK+L +  H      LAR+ +     +H VLA
Sbjct: 249 FAGKQLEDGVHAPLGAPLARWPV--SLVIHFVLA 280



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 96/248 (38%), Positives = 139/248 (56%), Gaps = 6/248 (2%)

Query: 20  EGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVE 78
           +GI  D   L FAG +LE GR L DY I+  STLH + +    M++FVK  T +T T +E
Sbjct: 10  DGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT-LE 68

Query: 79  AMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKE 138
                T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   + 
Sbjct: 69  VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRG 127

Query: 139 ILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFY 198
            + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y
Sbjct: 128 GMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 187

Query: 199 DMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDL 255
           +++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L
Sbjct: 188 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 247

Query: 256 FYAGTKLE 263
            +AG +LE
Sbjct: 248 IFAGKQLE 255



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 82/193 (42%), Positives = 113/193 (58%), Gaps = 3/193 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 67  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 126

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 127 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 184

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 185 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 244

Query: 180 HIMIYEGKKLEDS 192
             +I+ GK+LED 
Sbjct: 245 QRLIFAGKQLEDG 257



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 82/225 (36%), Positives = 122/225 (54%), Gaps = 6/225 (2%)

Query: 174 GVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVE 230
           G+      +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE
Sbjct: 11  GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 70

Query: 231 VLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQ 287
               + +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    Q
Sbjct: 71  SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQ 130

Query: 288 IFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQ 347
           IFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQ
Sbjct: 131 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 190

Query: 348 KHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ 392
           K STLH+VL     +          +I+L +  S+  +  K K Q
Sbjct: 191 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 235



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 96/184 (52%), Gaps = 9/184 (4%)

Query: 252 NQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTV 308
            Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+
Sbjct: 16  QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 75

Query: 309 QDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLI 368
            +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +      
Sbjct: 76  DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKT 135

Query: 369 FIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKV 422
               +I+L +  S+  +  K K Q         + L+     L+D RTLADY +     +
Sbjct: 136 LTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 195

Query: 423 VLVF 426
            LV 
Sbjct: 196 HLVL 199


>gi|11024714|ref|NP_061828.1| polyubiquitin-B precursor [Homo sapiens]
 gi|57114099|ref|NP_001009117.1| polyubiquitin-B [Pan troglodytes]
 gi|157427740|ref|NP_001098779.1| ubiquitin [Sus scrofa]
 gi|302563653|ref|NP_001181737.1| polyubiquitin-B [Macaca mulatta]
 gi|109113442|ref|XP_001087796.1| PREDICTED: ubiquitin D-like isoform 1 [Macaca mulatta]
 gi|109113444|ref|XP_001088043.1| PREDICTED: ubiquitin D-like isoform 3 [Macaca mulatta]
 gi|109113446|ref|XP_001087919.1| PREDICTED: ubiquitin D-like isoform 2 [Macaca mulatta]
 gi|296201638|ref|XP_002748114.1| PREDICTED: polyubiquitin-B-like isoform 1 [Callithrix jacchus]
 gi|296201640|ref|XP_002748115.1| PREDICTED: polyubiquitin-B-like isoform 2 [Callithrix jacchus]
 gi|296201642|ref|XP_002748116.1| PREDICTED: polyubiquitin-B-like isoform 3 [Callithrix jacchus]
 gi|297272002|ref|XP_002800358.1| PREDICTED: ubiquitin D-like [Macaca mulatta]
 gi|297272004|ref|XP_002800359.1| PREDICTED: ubiquitin D-like [Macaca mulatta]
 gi|297272006|ref|XP_002800360.1| PREDICTED: ubiquitin D-like [Macaca mulatta]
 gi|297272009|ref|XP_002800361.1| PREDICTED: ubiquitin D-like [Macaca mulatta]
 gi|297700142|ref|XP_002827118.1| PREDICTED: polyubiquitin-B isoform 2 [Pongo abelii]
 gi|301617759|ref|XP_002938289.1| PREDICTED: ubiquitin D isoform 1 [Xenopus (Silurana) tropicalis]
 gi|301617761|ref|XP_002938290.1| PREDICTED: ubiquitin D isoform 2 [Xenopus (Silurana) tropicalis]
 gi|332226973|ref|XP_003262663.1| PREDICTED: polyubiquitin-B isoform 2 [Nomascus leucogenys]
 gi|332267429|ref|XP_003282687.1| PREDICTED: polyubiquitin-B-like isoform 2 [Nomascus leucogenys]
 gi|332267433|ref|XP_003282689.1| PREDICTED: polyubiquitin-B-like isoform 4 [Nomascus leucogenys]
 gi|348560904|ref|XP_003466253.1| PREDICTED: polyubiquitin-B-like [Cavia porcellus]
 gi|390463130|ref|XP_003732975.1| PREDICTED: polyubiquitin-B-like [Callithrix jacchus]
 gi|395748608|ref|XP_003778797.1| PREDICTED: polyubiquitin-B [Pongo abelii]
 gi|426349328|ref|XP_004042260.1| PREDICTED: polyubiquitin-B isoform 1 [Gorilla gorilla gorilla]
 gi|426349330|ref|XP_004042261.1| PREDICTED: polyubiquitin-B isoform 2 [Gorilla gorilla gorilla]
 gi|426349332|ref|XP_004042262.1| PREDICTED: polyubiquitin-B isoform 3 [Gorilla gorilla gorilla]
 gi|426349334|ref|XP_004042263.1| PREDICTED: polyubiquitin-B isoform 4 [Gorilla gorilla gorilla]
 gi|426349336|ref|XP_004042264.1| PREDICTED: polyubiquitin-B isoform 5 [Gorilla gorilla gorilla]
 gi|426349338|ref|XP_004042265.1| PREDICTED: polyubiquitin-B isoform 6 [Gorilla gorilla gorilla]
 gi|426349340|ref|XP_004042266.1| PREDICTED: polyubiquitin-B isoform 7 [Gorilla gorilla gorilla]
 gi|441661901|ref|XP_004091551.1| PREDICTED: polyubiquitin-B [Nomascus leucogenys]
 gi|441661906|ref|XP_004091552.1| PREDICTED: polyubiquitin-B [Nomascus leucogenys]
 gi|441661909|ref|XP_004091553.1| PREDICTED: polyubiquitin-B [Nomascus leucogenys]
 gi|441678730|ref|XP_004092833.1| PREDICTED: polyubiquitin-B-like [Nomascus leucogenys]
 gi|441678733|ref|XP_004092834.1| PREDICTED: polyubiquitin-B-like [Nomascus leucogenys]
 gi|441678738|ref|XP_004092835.1| PREDICTED: polyubiquitin-B-like [Nomascus leucogenys]
 gi|302595874|sp|P0CG67.1|UBB_GORGO RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|302595875|sp|P0CG47.1|UBB_HUMAN RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|302595877|sp|P0CG65.1|UBB_PANTR RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|302595878|sp|P0CG60.1|UBB_PONPY RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|6647298|emb|CAA28495.1| ubiquitin [Homo sapiens]
 gi|12653221|gb|AAH00379.1| Ubiquitin B [Homo sapiens]
 gi|14424552|gb|AAH09301.1| Ubiquitin B [Homo sapiens]
 gi|15451313|dbj|BAB64460.1| hypothetical protein [Macaca fascicularis]
 gi|15929389|gb|AAH15127.1| Ubiquitin B [Homo sapiens]
 gi|20070823|gb|AAH26301.1| Ubiquitin B [Homo sapiens]
 gi|21410249|gb|AAH31027.1| Ubiquitin B [Homo sapiens]
 gi|28278206|gb|AAH46123.1| Ubiquitin B [Homo sapiens]
 gi|28316344|dbj|BAC56955.1| polyubiquitin B [Homo sapiens]
 gi|28316346|dbj|BAC56956.1| polyubiquitin B [Pongo pygmaeus]
 gi|28316348|dbj|BAC56957.1| polyubiquitin B [Pan troglodytes]
 gi|28316350|dbj|BAC56958.1| polyubiquitin B [Gorilla gorilla]
 gi|54697070|gb|AAV38907.1| ubiquitin B [Homo sapiens]
 gi|54887368|gb|AAH38999.1| Ubiquitin B [Homo sapiens]
 gi|61355410|gb|AAX41137.1| ubiquitin B [synthetic construct]
 gi|61359496|gb|AAX41727.1| ubiquitin B [synthetic construct]
 gi|119624906|gb|EAX04501.1| ubiquitin B, isoform CRA_a [Homo sapiens]
 gi|119624907|gb|EAX04502.1| ubiquitin B, isoform CRA_a [Homo sapiens]
 gi|156105183|gb|ABU49130.1| ubiquitin B [Sus scrofa]
 gi|156105185|gb|ABU49131.1| ubiquitin B [Sus scrofa]
 gi|281339566|gb|EFB15150.1| hypothetical protein PANDA_009728 [Ailuropoda melanoleuca]
 gi|343958162|dbj|BAK62936.1| ubiquitin [Pan troglodytes]
          Length = 229

 Score =  154 bits (389), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 88/223 (39%), Positives = 132/223 (59%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 128/209 (61%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 126/221 (57%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 118/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|110671522|gb|ABG82012.1| putative ubiquitin B [Diaphorina citri]
 gi|387019647|gb|AFJ51941.1| putative ubiquitin B [Crotalus adamanteus]
          Length = 229

 Score =  154 bits (389), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 88/223 (39%), Positives = 132/223 (59%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 128/209 (61%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 126/221 (57%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 118/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|291413653|ref|XP_002723083.1| PREDICTED: ubiquitin B [Oryctolagus cuniculus]
 gi|55977015|gb|AAV68344.1| ubiquitin C splice variant [Homo sapiens]
 gi|357610605|gb|EHJ67056.1| putative ubiquitin C variant 2 [Danaus plexippus]
          Length = 229

 Score =  154 bits (389), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 88/223 (39%), Positives = 132/223 (59%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 128/209 (61%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 126/221 (57%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 118/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|226477454|emb|CAX72421.1| ubiquitin C [Schistosoma japonicum]
 gi|226477456|emb|CAX72422.1| ubiquitin C [Schistosoma japonicum]
 gi|226477458|emb|CAX72423.1| ubiquitin C [Schistosoma japonicum]
 gi|226477460|emb|CAX72424.1| ubiquitin C [Schistosoma japonicum]
 gi|226477462|emb|CAX72425.1| ubiquitin C [Schistosoma japonicum]
 gi|226477464|emb|CAX72426.1| ubiquitin C [Schistosoma japonicum]
 gi|226484015|emb|CAX79676.1| ubiquitin C [Schistosoma japonicum]
 gi|226484017|emb|CAX79677.1| ubiquitin C [Schistosoma japonicum]
 gi|226484019|emb|CAX79678.1| ubiquitin C [Schistosoma japonicum]
 gi|226484021|emb|CAX79679.1| ubiquitin C [Schistosoma japonicum]
 gi|226484023|emb|CAX79680.1| ubiquitin C [Schistosoma japonicum]
 gi|226484027|emb|CAX79682.1| ubiquitin C [Schistosoma japonicum]
 gi|226484029|emb|CAX79683.1| ubiquitin C [Schistosoma japonicum]
 gi|226484031|emb|CAX79684.1| ubiquitin C [Schistosoma japonicum]
 gi|226484033|emb|CAX79685.1| ubiquitin C [Schistosoma japonicum]
 gi|226484035|emb|CAX79686.1| ubiquitin C [Schistosoma japonicum]
 gi|226484037|emb|CAX79687.1| ubiquitin C [Schistosoma japonicum]
 gi|226484039|emb|CAX79688.1| ubiquitin C [Schistosoma japonicum]
 gi|226484041|emb|CAX79689.1| ubiquitin C [Schistosoma japonicum]
 gi|226484043|emb|CAX79690.1| ubiquitin C [Schistosoma japonicum]
 gi|226484045|emb|CAX79691.1| ubiquitin C [Schistosoma japonicum]
 gi|226484049|emb|CAX79693.1| ubiquitin C [Schistosoma japonicum]
 gi|226484051|emb|CAX79694.1| ubiquitin C [Schistosoma japonicum]
 gi|226484053|emb|CAX79695.1| ubiquitin C [Schistosoma japonicum]
 gi|226484081|emb|CAX79709.1| ubiquitin C [Schistosoma japonicum]
 gi|443725027|gb|ELU12769.1| hypothetical protein CAPTEDRAFT_192594 [Capitella teleta]
          Length = 229

 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 88/223 (39%), Positives = 132/223 (59%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 128/209 (61%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 126/221 (57%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 118/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|12833702|dbj|BAB22630.1| unnamed protein product [Mus musculus]
          Length = 229

 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 88/223 (39%), Positives = 132/223 (59%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 128/209 (61%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 126/221 (57%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 118/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|61369554|gb|AAX43350.1| ubiquitin B [synthetic construct]
          Length = 230

 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/223 (39%), Positives = 132/223 (59%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 128/209 (61%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 126/221 (57%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 118/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|226484047|emb|CAX79692.1| ubiquitin C [Schistosoma japonicum]
          Length = 229

 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/223 (39%), Positives = 132/223 (59%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLKDGRTLSDYNIQKESTLHLVL 223



 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 87/209 (41%), Positives = 128/209 (61%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+L+D +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLKDGRTLSDYNIQKESTLHL 221



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/221 (36%), Positives = 126/221 (57%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +L+  +TL+ Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLKDGRTLSDYNIQKESTL 219



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 118/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLKDGRTLSDYNIQKESTLHLVL 223



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +L+ GR L DY I+  STLH +
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLKDGRTLSDYNIQKESTLHLV 222


>gi|73955934|ref|XP_536651.2| PREDICTED: polyubiquitin-B isoform 1 [Canis lupus familiaris]
 gi|345800303|ref|XP_003434677.1| PREDICTED: polyubiquitin-B [Canis lupus familiaris]
          Length = 229

 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/223 (39%), Positives = 132/223 (59%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MPIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 128/209 (61%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 125/221 (56%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M +FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MPIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 78/221 (35%), Positives = 116/221 (52%), Gaps = 9/221 (4%)

Query: 215 IFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIK 274
           IFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y I+
Sbjct: 3   IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 62

Query: 275 NNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFA 331
               L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FA
Sbjct: 63  KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 122

Query: 332 GKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKF 391
           GK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K K 
Sbjct: 123 GKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 182

Query: 392 Q------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 183 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|350537977|ref|NP_001232075.1| putative ubiquitin C variant 2 [Taeniopygia guttata]
 gi|197129056|gb|ACH45554.1| putative ubiquitin C variant 2 [Taeniopygia guttata]
          Length = 248

 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/223 (39%), Positives = 132/223 (59%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 128/209 (61%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 126/221 (57%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 118/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 1/73 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQ 72
             M+   + P  Q
Sbjct: 227 GGMQXLCEDPDWQ 239


>gi|225715800|gb|ACO13746.1| Ubiquitin [Esox lucius]
          Length = 229

 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 87/223 (39%), Positives = 132/223 (59%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  + +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTVENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/209 (41%), Positives = 128/209 (61%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ ++N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTVENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 126/221 (57%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  TV+N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTVENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 118/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    V +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTVENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/135 (45%), Positives = 85/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 209 SDYNIQKESTLHLVL 223


>gi|440798058|gb|ELR19129.1| polyubiquitin, putative [Acanthamoeba castellanii str. Neff]
          Length = 229

 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 89/223 (39%), Positives = 131/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK+ + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQ 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/209 (41%), Positives = 124/209 (59%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 124/221 (56%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K+ + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 179 KQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 219



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 118/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK+ + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQ 180

Query: 390 KFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222


>gi|156358391|ref|XP_001624503.1| predicted protein [Nematostella vectensis]
 gi|156211288|gb|EDO32403.1| predicted protein [Nematostella vectensis]
          Length = 229

 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/223 (39%), Positives = 131/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q  +FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRFIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 127/209 (60%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
              I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRFIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 81/221 (36%), Positives = 125/221 (56%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q   +AG +LE  +TL+ Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRFIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 78/223 (34%), Positives = 117/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         +  +     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRFIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D     FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRFIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|226484025|emb|CAX79681.1| ubiquitin C [Schistosoma japonicum]
          Length = 229

 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 88/223 (39%), Positives = 131/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +        Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGTPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 87/209 (41%), Positives = 127/209 (60%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEG   DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGTPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 119/223 (53%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK  TP   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGTPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 84/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEG   D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGTPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 209 SDYNIQKESTLHLVL 223


>gi|6007448|gb|AAF00920.1|AF188158_1 ubiquitin [Oxytricha trifallax]
 gi|403333775|gb|EJY66009.1| Putative ubiquitin C variant 2 [Oxytricha trifallax]
          Length = 229

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 87/223 (39%), Positives = 132/223 (59%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + L+V+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + L+VE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITLDV+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/209 (41%), Positives = 127/209 (60%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T ++  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 126/221 (57%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-DVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 118/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + L+VE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITLDV+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           + V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|403338482|gb|EJY68482.1| Putative ubiquitin C variant 2 [Oxytricha trifallax]
          Length = 228

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 87/223 (39%), Positives = 132/223 (59%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + L+V+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + L+VE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITLDV+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/209 (41%), Positives = 127/209 (60%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T ++  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 126/221 (57%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-DVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 118/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + L+VE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITLDV+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           + V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|217074566|gb|ACJ85643.1| unknown [Medicago truncatula]
          Length = 229

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 90/223 (40%), Positives = 131/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA + +  G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQNKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 124/209 (59%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQNKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 123/221 (55%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQNKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 219



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 116/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + N   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQNKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222


>gi|388507280|gb|AFK41706.1| unknown [Medicago truncatula]
          Length = 233

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 90/223 (40%), Positives = 130/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 124/209 (59%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 123/221 (55%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 219



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 78/211 (36%), Positives = 112/211 (53%), Gaps = 9/211 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADY 414
           K Q         + L+     L+D RTLADY
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 211



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222


>gi|290979900|ref|XP_002672671.1| polyubiquitin [Naegleria gruberi]
 gi|284086249|gb|EFC39927.1| polyubiquitin [Naegleria gruberi]
          Length = 293

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/302 (33%), Positives = 165/302 (54%), Gaps = 22/302 (7%)

Query: 62  MKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMT 120
           M+LF+K  +  +  + VE     +++ IK ++  K+GI      L+ +GK L ED  T+ 
Sbjct: 1   MQLFIKTLSGHSFPIDVECT--DSIEKIKELVNEKQGIPPPSQRLILNGKKL-EDGKTIQ 57

Query: 121 SMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADH 180
              +K +S I+L    ++ ++            LEV+ +  I +VK+ +    G+     
Sbjct: 58  DYEMKQDSTIYLALSWRDTIT------------LEVESNDTIENVKSKIQDKEGIPPDQQ 105

Query: 181 IMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRD 237
            +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +
Sbjct: 106 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIEN 165

Query: 238 VKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWG 294
           VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  
Sbjct: 166 VKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLT 225

Query: 295 GKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHM 354
           GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+
Sbjct: 226 GKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 285

Query: 355 VL 356
           VL
Sbjct: 286 VL 287



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 83/209 (39%), Positives = 128/209 (61%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ ++ I+N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 79  LEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 138

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T++N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 139 GGMQIFVKTLTGKTIT-LEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 196

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ +  I +VK+ +    G+    
Sbjct: 197 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQ 256

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 257 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 285



 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 93/296 (31%), Positives = 149/296 (50%), Gaps = 18/296 (6%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + +F+K  +G    ++V+ + +I  +K +V    G+      +I  GKKLED KT+  Y+
Sbjct: 1   MQLFIKTLSGHSFPIDVECTDSIEKIKELVNEKQGIPPPSQRLILNGKKLEDGKTIQDYE 60

Query: 200 MKDECLLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAG 259
           MK +           I++     + + LEVE    + +VK  + +   +    Q L +AG
Sbjct: 61  MKQDST---------IYLALSWRDTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAG 111

Query: 260 TKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLF 316
            +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK K+ 
Sbjct: 112 KQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENVKSKIQ 171

Query: 317 DKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISL 376
           DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +I+L
Sbjct: 172 DKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL 231

Query: 377 SISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
            +  ++  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 232 EVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 287



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/281 (31%), Positives = 152/281 (54%), Gaps = 18/281 (6%)

Query: 3   VKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGRLV-DYGIRNNSTLHFLHQNLSE 61
           V+ ++ I+ +K +++ K+GI      L   G +LE G+ + DY ++ +ST          
Sbjct: 17  VECTDSIEKIKELVNEKQGIPPPSQRLILNGKKLEDGKTIQDYEMKQDST---------- 66

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
             +++ +    T T +E     T++N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 67  --IYLALSWRDTIT-LEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 122

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ +  I +VK+ +    G+      
Sbjct: 123 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQR 182

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 183 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENV 242

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 243 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 283


>gi|410976446|ref|XP_003994631.1| PREDICTED: polyubiquitin-B-like [Felis catus]
          Length = 229

 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 87/223 (39%), Positives = 131/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKGKIQEKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 87/209 (41%), Positives = 127/209 (60%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKGKIQEKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 126/221 (57%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKGKIQEKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 117/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  +     +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKGKIQEKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/135 (45%), Positives = 85/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 209 SDYNIQKESTLHLVL 223


>gi|452824412|gb|EME31415.1| ubiquitin [Galdieria sulphuraria]
          Length = 229

 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 87/223 (39%), Positives = 132/223 (59%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK+ +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKS 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 86/209 (41%), Positives = 129/209 (61%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 81/221 (36%), Positives = 127/221 (57%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 118/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKS 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|226469792|emb|CAX76726.1| polyubiquitin [Schistosoma japonicum]
          Length = 228

 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 87/223 (39%), Positives = 132/223 (59%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTI+L+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTISLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIPDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 129/209 (61%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ ++LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTISLEVEPSDTIENVKAKIPDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 117/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +ISL +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTISLEVEPSDTIENVKA 180

Query: 390 K------FQAAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K           + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIPDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/135 (44%), Positives = 84/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T ++ E  P  T++N+K  I  KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTISL-EVEPSDTIENVKAKIPDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 209 SDYNIQKESTLHLVL 223


>gi|151935411|gb|ABS18744.1| ubiqutin ligase-like protein [Oryza sativa Japonica Group]
 gi|326518380|dbj|BAJ88219.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 229

 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 90/223 (40%), Positives = 130/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 124/209 (59%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 123/221 (55%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 219



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 116/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222


>gi|350537541|ref|NP_001232763.1| putative ubiquitin C variant 9 [Taeniopygia guttata]
 gi|197129065|gb|ACH45563.1| putative ubiquitin C variant 9 [Taeniopygia guttata]
          Length = 229

 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 88/223 (39%), Positives = 132/223 (59%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTIILEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 87/209 (41%), Positives = 128/209 (61%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T  ++E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTI-ILEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 78/223 (34%), Positives = 117/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTI L+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTIILEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/135 (45%), Positives = 85/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 209 SDYNIQKESTLHLVL 223


>gi|363992286|gb|AEW46688.1| polyubiquitin, partial [Ulva linza]
          Length = 226

 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 90/223 (40%), Positives = 130/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 124/209 (59%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 123/221 (55%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 219



 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 116/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222


>gi|355754493|gb|AET06143.1| ubiquitin [Papaver somniferum]
          Length = 229

 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 90/223 (40%), Positives = 130/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 124/209 (59%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 123/221 (55%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 219



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 116/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222


>gi|224116110|ref|XP_002317213.1| predicted protein [Populus trichocarpa]
 gi|118487986|gb|ABK95814.1| unknown [Populus trichocarpa]
 gi|222860278|gb|EEE97825.1| predicted protein [Populus trichocarpa]
          Length = 229

 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 90/223 (40%), Positives = 130/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 124/209 (59%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 123/221 (55%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 219



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 116/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222


>gi|28804499|dbj|BAC57955.1| polyubiquitin [Aster tripolium]
          Length = 229

 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 90/223 (40%), Positives = 130/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 124/209 (59%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 123/221 (55%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 219



 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 116/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222


>gi|18412785|ref|NP_567286.1| ubiquitin 11 [Arabidopsis thaliana]
 gi|30679296|ref|NP_849291.1| polyubiquitin 14 [Arabidopsis thaliana]
 gi|79325001|ref|NP_001031585.1| ubiquitin 11 [Arabidopsis thaliana]
 gi|186511479|ref|NP_567247.2| polyubiquitin 14 [Arabidopsis thaliana]
 gi|186511546|ref|NP_001118936.1| ubiquitin 11 [Arabidopsis thaliana]
 gi|224078711|ref|XP_002305607.1| predicted protein [Populus trichocarpa]
 gi|224169339|ref|XP_002339256.1| predicted protein [Populus trichocarpa]
 gi|302595976|sp|P0CH33.1|UBQ11_ARATH RecName: Full=Polyubiquitin 11; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|5732081|gb|AAD48980.1|AF162444_12 contains similarity to Pfam family PF00240 - Ubiquitin family;
           score=526.5, E=1.9e-154, N=3 [Arabidopsis thaliana]
 gi|3882081|emb|CAA10056.1| polyubiquitin [Vicia faba]
 gi|7267264|emb|CAB81047.1| AT4g05050 [Arabidopsis thaliana]
 gi|12583569|emb|CAC27335.1| putative polyubiquitin [Picea abies]
 gi|15450587|gb|AAK96565.1| AT4g05050/T32N4_13 [Arabidopsis thaliana]
 gi|15810026|gb|AAL06940.1| AT4g05050/T32N4_13 [Arabidopsis thaliana]
 gi|15982846|gb|AAL09770.1| AT4g05050/T32N4_13 [Arabidopsis thaliana]
 gi|20466093|gb|AAM19968.1| AT4g05050/T32N4_13 [Arabidopsis thaliana]
 gi|24899675|gb|AAN65052.1| Unknown protein [Arabidopsis thaliana]
 gi|56481667|gb|AAV92464.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481669|gb|AAV92465.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481671|gb|AAV92466.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481673|gb|AAV92467.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481675|gb|AAV92468.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481677|gb|AAV92469.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481679|gb|AAV92470.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481681|gb|AAV92471.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481683|gb|AAV92472.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481685|gb|AAV92473.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481687|gb|AAV92474.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481689|gb|AAV92475.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481691|gb|AAV92476.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481693|gb|AAV92477.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481695|gb|AAV92478.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481697|gb|AAV92479.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481699|gb|AAV92480.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481701|gb|AAV92481.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481703|gb|AAV92482.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481705|gb|AAV92483.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481707|gb|AAV92484.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481709|gb|AAV92485.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481711|gb|AAV92486.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481713|gb|AAV92487.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481715|gb|AAV92488.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481717|gb|AAV92489.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481719|gb|AAV92490.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|110740912|dbj|BAE98552.1| hypothetical protein [Arabidopsis thaliana]
 gi|222848571|gb|EEE86118.1| predicted protein [Populus trichocarpa]
 gi|222874764|gb|EEF11895.1| predicted protein [Populus trichocarpa]
 gi|332656844|gb|AEE82244.1| polyubiquitin 14 [Arabidopsis thaliana]
 gi|332656845|gb|AEE82245.1| polyubiquitin 14 [Arabidopsis thaliana]
 gi|332657068|gb|AEE82468.1| ubiquitin 11 [Arabidopsis thaliana]
 gi|332657069|gb|AEE82469.1| ubiquitin 11 [Arabidopsis thaliana]
 gi|332657070|gb|AEE82470.1| ubiquitin 11 [Arabidopsis thaliana]
 gi|399513946|gb|AFP43343.1| polyubiquitin [Arabidopsis thaliana]
          Length = 229

 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 90/223 (40%), Positives = 130/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 124/209 (59%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 123/221 (55%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 219



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 116/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222


>gi|30523391|gb|AAP31578.1| ubiquitin [Hevea brasiliensis]
          Length = 230

 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 90/223 (40%), Positives = 130/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 124/209 (59%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 123/221 (55%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 219



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 116/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222


>gi|343485975|dbj|BAK61744.1| ubiquitin [Collozoum amoeboides]
          Length = 228

 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 89/223 (39%), Positives = 130/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + L+V+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLDVESSDTISNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + L+VE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTISNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITLDV+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTISNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/209 (41%), Positives = 123/209 (58%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDVESSDTISNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T ++     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LDVESSDTISNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTISNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 80/221 (36%), Positives = 123/221 (55%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-DVESSDTISNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTISNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + L+VE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTISNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 219



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 115/223 (51%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + L+VE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLDVESSDTISNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITLDV+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTISNVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+     K 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTISNVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 35/56 (62%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           + V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LDVESSDTISNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222


>gi|53850089|emb|CAH59739.1| polyubiquitin [Plantago major]
          Length = 232

 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 90/223 (40%), Positives = 130/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 124/209 (59%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 123/221 (55%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 219



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 116/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222


>gi|217074516|gb|ACJ85618.1| unknown [Medicago truncatula]
          Length = 229

 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 90/223 (40%), Positives = 130/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 124/209 (59%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 123/221 (55%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 219



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 116/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222


>gi|242096698|ref|XP_002438839.1| hypothetical protein SORBIDRAFT_10g027030 [Sorghum bicolor]
 gi|241917062|gb|EER90206.1| hypothetical protein SORBIDRAFT_10g027030 [Sorghum bicolor]
          Length = 229

 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 90/223 (40%), Positives = 130/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKDSTLHLVL 223



 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 87/209 (41%), Positives = 124/209 (59%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ +  L +
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKDSTLHL 221



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 124/221 (56%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TLA Y I+ +  L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKDSTL 219



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 116/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKDSTLHLVL 223



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+ +STLH +
Sbjct: 167 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKDSTLHLV 222


>gi|21592581|gb|AAM64530.1| ubiquitin homolog [Arabidopsis thaliana]
          Length = 229

 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 90/223 (40%), Positives = 130/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLXLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 123/209 (58%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +    
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLXLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 123/221 (55%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLXLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 219



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 116/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLXLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222


>gi|323303927|gb|EGA57707.1| Ubi4p [Saccharomyces cerevisiae FostersB]
          Length = 248

 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 94/234 (40%), Positives = 138/234 (58%), Gaps = 6/234 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG  LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKXLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVE 230
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 246



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/248 (37%), Positives = 142/248 (57%), Gaps = 8/248 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKXL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQ 303
           KTITL+V+
Sbjct: 239 KTITLEVE 246



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/223 (38%), Positives = 129/223 (57%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK+ +    G+      +I+ GK LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKXLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 70/160 (43%), Positives = 98/160 (61%), Gaps = 3/160 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHS 159
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESS 248



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 75/211 (35%), Positives = 111/211 (52%), Gaps = 9/211 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG  LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKXLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180

Query: 390 KFQAA------VKELLVDQVALQDDRTLADY 414
           K Q         + L+     L+D RTL+DY
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 211


>gi|357137122|ref|XP_003570150.1| PREDICTED: polyubiquitin 11-like [Brachypodium distachyon]
          Length = 241

 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 90/223 (40%), Positives = 130/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 124/209 (59%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 123/221 (55%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 219



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 116/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222


>gi|388510652|gb|AFK43392.1| unknown [Medicago truncatula]
          Length = 233

 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 89/223 (39%), Positives = 129/223 (57%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I + KA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNAKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 123/209 (58%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNAKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 122/221 (55%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNAKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 219



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 115/223 (51%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + + K  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNAKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 81/135 (60%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVF 134
              NI+ ES +HLV 
Sbjct: 209 ADYNIQKESTLHLVL 223


>gi|356545971|ref|XP_003541406.1| PREDICTED: polyubiquitin-like [Glycine max]
          Length = 269

 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 99/252 (39%), Positives = 143/252 (56%), Gaps = 11/252 (4%)

Query: 111 LLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVG 170
           L K+  + +    +K  SII LVF     + IFVK  TG+ + LEV+ S  I +VKA + 
Sbjct: 16  LYKQPHSRLLPTPLKYLSII-LVFN----MQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 70

Query: 171 SVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRL 227
              G+      +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + L
Sbjct: 71  DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL 130

Query: 228 EVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPS 284
           EVE    + +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L  
Sbjct: 131 EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 190

Query: 285 PFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARY 344
             QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA Y
Sbjct: 191 GMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 250

Query: 345 NIQKHSTLHMVL 356
           NIQK STLH+VL
Sbjct: 251 NIQKESTLHLVL 262



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 124/209 (59%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 54  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 113

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 114 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 171

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 172 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 231

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 232 QRLIFAGKQLEDGRTLADYNIQKESTLHL 260



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/224 (35%), Positives = 117/224 (52%), Gaps = 9/224 (4%)

Query: 212 SIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASY 271
           ++QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y
Sbjct: 39  NMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 98

Query: 272 GIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSI 328
            I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q +
Sbjct: 99  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 158

Query: 329 VFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAK 388
           +FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +  K
Sbjct: 159 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 218

Query: 389 VKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
            K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 219 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 262



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 59/163 (36%), Positives = 83/163 (50%), Gaps = 17/163 (10%)

Query: 281 VLPSPF-----------QIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           +LP+P            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 24  LLPTPLKYLSIILVFNMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 83

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 84  FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 143

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 144 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 186



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 206 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 261


>gi|358336555|dbj|GAA55031.1| ubiquitin C [Clonorchis sinensis]
          Length = 228

 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 87/223 (39%), Positives = 131/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/209 (41%), Positives = 127/209 (60%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 81/221 (36%), Positives = 125/221 (56%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 78/223 (34%), Positives = 117/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|340727978|ref|XP_003402310.1| PREDICTED: polyubiquitin-B-like isoform 1 [Bombus terrestris]
 gi|340727980|ref|XP_003402311.1| PREDICTED: polyubiquitin-B-like isoform 2 [Bombus terrestris]
 gi|340727982|ref|XP_003402312.1| PREDICTED: polyubiquitin-B-like isoform 3 [Bombus terrestris]
          Length = 229

 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 87/223 (39%), Positives = 131/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/209 (41%), Positives = 127/209 (60%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 81/221 (36%), Positives = 125/221 (56%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 78/223 (34%), Positives = 117/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|443713356|gb|ELU06246.1| hypothetical protein CAPTEDRAFT_186294 [Capitella teleta]
          Length = 231

 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 86/221 (38%), Positives = 130/221 (58%), Gaps = 6/221 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHM 354
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 128/209 (61%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 126/221 (57%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 115/213 (53%), Gaps = 9/213 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGM 416
           K Q         + L+     L+D RTL+DY +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 213



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 80/147 (54%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 40/62 (64%), Gaps = 1/62 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH   + L
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLCQRQL 226

Query: 60  SE 61
           ++
Sbjct: 227 TD 228


>gi|344232965|gb|EGV64838.1| ubiquitin [Candida tenuis ATCC 10573]
          Length = 229

 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 89/223 (39%), Positives = 130/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK+ +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/209 (41%), Positives = 125/209 (59%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 124/221 (56%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 219



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 116/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222


>gi|380446928|gb|AFD53810.1| ubiquitin, partial [Trichoderma harzianum]
          Length = 264

 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 94/234 (40%), Positives = 138/234 (58%), Gaps = 6/234 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 20  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 79

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 80  GGMQIFVKTLTWKTVTL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 137

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 138 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 197

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVE 230
             +I+ GK+LED +TL+ Y ++ E  L +       +QIFV+T   + + LEVE
Sbjct: 198 QRLIFAGKQLEDGRTLSDYXIQXESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 251



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 97/259 (37%), Positives = 148/259 (57%), Gaps = 8/259 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 6   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 63

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  T + V LEV+ S  I +VK+ +    G+      
Sbjct: 64  YNIQKESTLHLVLRLRGGMQIFVKTLTWKTVTLEVESSDTIDNVKSKIQDKEGIPPDQQR 123

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 124 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 183

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 184 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYXIQXESTLHLVLRLRGGMQIFVKTLTG 243

Query: 296 KTITLDVQPYNTVQDVKVK 314
           KTITL+V+  +T+ +V V+
Sbjct: 244 KTITLEVESSDTIDNVLVQ 262



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 128/223 (57%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK+ +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 6   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 65

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + V LEVE    + +VK  + +   +    Q L 
Sbjct: 66  IQKESTLHLVLRLRGGMQIFVKTLTWKTVTLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 125

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 126 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 185

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ Y IQ  STLH+VL
Sbjct: 186 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYXIQXESTLHLVL 228



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/166 (42%), Positives = 100/166 (60%), Gaps = 3/166 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 96  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 155

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 156 GGMQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 213

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDV 165
           +   I+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +V
Sbjct: 214 SDYXIQXESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 259



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/213 (34%), Positives = 113/213 (53%), Gaps = 9/213 (4%)

Query: 211 SSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLAS 270
           +++QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ 
Sbjct: 4   ATMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 63

Query: 271 YGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQS 327
           Y I+    L +   L    QIFVKT   KT+TL+V+  +T+ +VK K+ DK   P   Q 
Sbjct: 64  YNIQKESTLHLVLRLRGGMQIFVKTLTWKTVTLEVESSDTIDNVKSKIQDKEGIPPDQQR 123

Query: 328 IVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMA 387
           ++FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  +  
Sbjct: 124 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 183

Query: 388 KVKFQAA------VKELLVDQVALQDDRTLADY 414
           K K Q         + L+     L+D RTL+DY
Sbjct: 184 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 216



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 80/143 (55%), Gaps = 14/143 (9%)

Query: 284 SPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLAR 343
           +  QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ 
Sbjct: 4   ATMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 63

Query: 344 YNIQKHSTLHMVLAPSSRIIELPLIFID----PSISLSISISEVKEMAKVKFQAA----- 394
           YNIQK STLH+VL    R+     IF+      +++L +  S+  +  K K Q       
Sbjct: 64  YNIQKESTLHLVL----RLRGGMQIFVKTLTWKTVTLEVESSDTIDNVKSKIQDKEGIPP 119

Query: 395 -VKELLVDQVALQDDRTLADYGM 416
             + L+     L+D RTL+DY +
Sbjct: 120 DQQRLIFAGKQLEDGRTLSDYNI 142


>gi|168062150|ref|XP_001783045.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162665429|gb|EDQ52114.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 229

 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 89/223 (39%), Positives = 129/223 (57%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKT 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 87/209 (41%), Positives = 123/209 (58%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 123/221 (55%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 219



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 116/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKT 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222


>gi|357512381|ref|XP_003626479.1| Ubiquitin-like protein [Medicago truncatula]
 gi|355501494|gb|AES82697.1| Ubiquitin-like protein [Medicago truncatula]
          Length = 277

 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 90/223 (40%), Positives = 130/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 49  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 108

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 109 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 168

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 169 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 228

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 229 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 271



 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 124/209 (59%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 63  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 122

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 123 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 180

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 181 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 240

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 241 QRLIFAGKQLEDGRTLADYNIQKESTLHL 269



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 83/222 (37%), Positives = 124/222 (55%), Gaps = 5/222 (2%)

Query: 61  EMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMT 120
           +M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+ 
Sbjct: 48  KMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLA 105

Query: 121 SMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADH 180
             NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+     
Sbjct: 106 DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ 165

Query: 181 IMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRD 237
            +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +
Sbjct: 166 RLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDN 225

Query: 238 VKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 226 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 267



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 116/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 49  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 108

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 109 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 168

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 169 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 228

Query: 390 KFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 229 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 271



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 215 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 270


>gi|302822663|ref|XP_002992988.1| hypothetical protein SELMODRAFT_187148 [Selaginella moellendorffii]
 gi|302825886|ref|XP_002994514.1| hypothetical protein SELMODRAFT_138728 [Selaginella moellendorffii]
 gi|300137505|gb|EFJ04422.1| hypothetical protein SELMODRAFT_138728 [Selaginella moellendorffii]
 gi|300139188|gb|EFJ05934.1| hypothetical protein SELMODRAFT_187148 [Selaginella moellendorffii]
          Length = 229

 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 89/223 (39%), Positives = 129/223 (57%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKT 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 87/209 (41%), Positives = 123/209 (58%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 123/221 (55%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 219



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 116/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKT 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222


>gi|375298520|dbj|BAL61087.1| polyubiquitin [Dianthus caryophyllus]
          Length = 229

 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 89/223 (39%), Positives = 129/223 (57%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKT 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/209 (41%), Positives = 123/209 (58%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 123/221 (55%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 219



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 116/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKT 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222


>gi|358332080|dbj|GAA27344.2| polyubiquitin-A [Clonorchis sinensis]
          Length = 288

 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 87/223 (39%), Positives = 131/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 61  MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 120

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 121 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLI 180

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK 
Sbjct: 181 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 240

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 241 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 283



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 87/209 (41%), Positives = 127/209 (60%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 75  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 134

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 135 GGMQIFVKTLTGKTIT-LEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 192

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 193 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 252

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 253 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 281



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 81/221 (36%), Positives = 125/221 (56%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 61  MQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 118

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 119 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQR 178

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 179 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 238

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 239 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 279



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/273 (30%), Positives = 132/273 (48%), Gaps = 18/273 (6%)

Query: 163 RDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEMFPSSIQIFVRTPIE 222
           RD+  +  S   +    H     G+          +   D+    +  +++QIFV+T   
Sbjct: 20  RDLACMTSSQSALRQTTHRSCLAGQ---------IHGRTDKVQSNLRRTAMQIFVKTLTG 70

Query: 223 EIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV- 281
           + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L + 
Sbjct: 71  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 130

Query: 282 --LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENH 339
             L    QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +  
Sbjct: 131 LRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 190

Query: 340 VLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA----- 394
            L+ YNIQK STLH+VL     +          +I+L +  S+  E  K K Q       
Sbjct: 191 TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 250

Query: 395 -VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
             + L+     L+D RTL+DY +     + LV 
Sbjct: 251 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 283



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 84/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 151 LEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 210

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 211 GGMQIFVKTLTGKTIT-LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 268

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 269 SDYNIQKESTLHLVL 283


>gi|343485991|dbj|BAK61751.1| ubiquitin [Sphaerozoum punctatum]
          Length = 228

 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 88/223 (39%), Positives = 130/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + L+V+ S  I +V+A +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLDVESSDTISNVEAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + L+VE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTISNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITLDV+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTISNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 85/209 (40%), Positives = 123/209 (58%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I N++A I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDVESSDTISNVEAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T ++     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LDVESSDTISNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTISNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 123/221 (55%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +     T+ N++  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-DVESSDTISNVEAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTISNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + L+VE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTISNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 219



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 115/223 (51%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + L+VE    + +V+  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLDVESSDTISNVEAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITLDV+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTISNVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+     K 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTISNVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/135 (44%), Positives = 80/135 (59%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LDVESSDTISNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T ++     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTIT-LDVESSDTISNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVF 134
              NI+ ES +HLV 
Sbjct: 209 ADYNIQKESTLHLVL 223


>gi|168005465|ref|XP_001755431.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162693559|gb|EDQ79911.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 231

 Score =  150 bits (380), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 89/223 (39%), Positives = 129/223 (57%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKT 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 87/209 (41%), Positives = 123/209 (58%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 123/221 (55%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 219



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 116/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKT 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/142 (44%), Positives = 84/142 (59%), Gaps = 3/142 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILS 141
              NI+ ES +HLV   +  LS
Sbjct: 209 ADYNIQKESTLHLVLRLRGFLS 230


>gi|340059193|emb|CCC53576.1| putative polyubiquitin [Trypanosoma vivax Y486]
          Length = 282

 Score =  150 bits (380), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 94/254 (37%), Positives = 142/254 (55%), Gaps = 12/254 (4%)

Query: 109 GKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAI 168
           G+ L+E+TAT ++   +           +  + I VK  TG+ + LEV+ S  I +VKA 
Sbjct: 13  GEGLRENTATPSNNRQQGR------MDQERTMLILVKTLTGKTIALEVEASDTIENVKAK 66

Query: 169 VGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIV 225
           +    G+      +I+ GK+LE+ +TLA Y+++ E  L +       +QIFV+T   + +
Sbjct: 67  IQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 126

Query: 226 RLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---L 282
            LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L
Sbjct: 127 ALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRL 186

Query: 283 PSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLA 342
               QIFVKT  GKTI L+V+  +T+++VK K+ DK   P   Q ++FAGK+L E   LA
Sbjct: 187 RGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLA 246

Query: 343 RYNIQKHSTLHMVL 356
            YNIQK STLH+VL
Sbjct: 247 DYNIQKESTLHLVL 260



 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 92/223 (41%), Positives = 133/223 (59%), Gaps = 8/223 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 52  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLR 111

Query: 60  SEMKLFVKIPTNQT-ATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
             M++FVK  T +T A  VEA    T++N+K  IQ KEGI  DQ  L++ GK L E+  T
Sbjct: 112 GGMQIFVKTLTGKTIALEVEA--SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EEGRT 168

Query: 119 MTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAA 178
           +   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+   
Sbjct: 169 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPD 228

Query: 179 DHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVR 218
              +I+ GK+LE+ +TLA Y+++ E  L +       +QIFV+
Sbjct: 229 QQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVK 271



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 78/221 (35%), Positives = 113/221 (51%), Gaps = 9/221 (4%)

Query: 215 IFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIK 274
           I V+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y I+
Sbjct: 40  ILVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQ 99

Query: 275 NNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFA 331
               L +   L    QIFVKT  GKTI L+V+  +T+++VK K+ DK   P   Q ++FA
Sbjct: 100 KESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 159

Query: 332 GKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKF 391
           GK+L E   LA YNIQK STLH+VL     +          +I+L +  S+  E  K K 
Sbjct: 160 GKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKI 219

Query: 392 Q------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           Q         + L+     L++ RTLADY +     + LV 
Sbjct: 220 QDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVL 260


>gi|32400967|gb|AAP80689.1| polyubiquitin [Griffithsia japonica]
          Length = 246

 Score =  150 bits (380), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 88/232 (37%), Positives = 134/232 (57%), Gaps = 9/232 (3%)

Query: 131 HLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLE 190
           H +F    ++ IFVK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+LE
Sbjct: 12  HTLFI---VMQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLE 68

Query: 191 DSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIID 247
           D +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   
Sbjct: 69  DGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEG 128

Query: 248 LSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQP 304
           +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+ 
Sbjct: 129 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVES 188

Query: 305 YNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
            +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 189 SDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 240



 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 86/209 (41%), Positives = 126/209 (60%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 32  LEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 91

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T++N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 92  GGMQIFVKTLTGKTIT-LEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 149

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 150 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQ 209

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 210 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 238



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 88/238 (36%), Positives = 133/238 (55%), Gaps = 5/238 (2%)

Query: 45  GIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFT 104
           G RN+S LH  H     M++FVK  T +T T+ E     T++N+KT IQ KEGI  DQ  
Sbjct: 1   GTRNSSHLHPKHTLFIVMQIFVKTLTGKTITL-EVESSDTIENVKTKIQDKEGIPPDQQR 59

Query: 105 LVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRD 164
           L++ GK L ED  T++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +
Sbjct: 60  LIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIEN 118

Query: 165 VKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPI 221
           VK  +    G+      +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T  
Sbjct: 119 VKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLT 178

Query: 222 EEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
            + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 GKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 236



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 78/223 (34%), Positives = 117/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 18  MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 77

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++
Sbjct: 78  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLI 137

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 138 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKT 197

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 198 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 240



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 184 LEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 239


>gi|118370600|ref|XP_001018501.1| Ubiquitin family protein [Tetrahymena thermophila]
 gi|89300268|gb|EAR98256.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
          Length = 228

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/223 (38%), Positives = 131/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + L+V+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + L+VE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITLDV+  +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/210 (41%), Positives = 128/210 (60%), Gaps = 5/210 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
             M++FVK  T +T T+ VEA    T++N+K  IQ KEGI  DQ  L++ GK L ED  T
Sbjct: 75  GGMQIFVKTLTGKTITLDVEA--SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 131

Query: 119 MTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAA 178
           ++  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+   
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPD 191

Query: 179 DHIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
              +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 192 QQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/222 (36%), Positives = 127/222 (57%), Gaps = 7/222 (3%)

Query: 62  MKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMT 120
           M++FVK  T +T T+ VEA    T++N+K  IQ KEGI  DQ  L++ GK L ED  T++
Sbjct: 1   MQIFVKTLTGKTITLDVEA--SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLS 57

Query: 121 SMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADH 180
             NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+     
Sbjct: 58  DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQ 117

Query: 181 IMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRD 237
            +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + +
Sbjct: 118 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIEN 177

Query: 238 VKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 178 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 78/223 (34%), Positives = 117/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + L+VE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITLDV+  +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           + V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|330805887|ref|XP_003290908.1| ubiquitin [Dictyostelium purpureum]
 gi|325078946|gb|EGC32571.1| ubiquitin [Dictyostelium purpureum]
          Length = 229

 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 87/223 (39%), Positives = 131/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEGSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/209 (41%), Positives = 127/209 (60%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEGSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEGSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 81/221 (36%), Positives = 125/221 (56%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEGSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/211 (36%), Positives = 113/211 (53%), Gaps = 9/211 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEGSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKA 180

Query: 390 KFQAA------VKELLVDQVALQDDRTLADY 414
           K Q         + L+     L+D RTL+DY
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 211



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVEGSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|294887015|ref|XP_002771956.1| polyubiquitin, putative [Perkinsus marinus ATCC 50983]
 gi|239875778|gb|EER03772.1| polyubiquitin, putative [Perkinsus marinus ATCC 50983]
          Length = 230

 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/223 (38%), Positives = 131/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + L+V+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + L+VE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITLDV+  +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/210 (41%), Positives = 128/210 (60%), Gaps = 5/210 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
             M++FVK  T +T T+ VEA    T++N+K  IQ KEGI  DQ  L++ GK L ED  T
Sbjct: 75  GGMQIFVKTLTGKTITLDVEA--SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 131

Query: 119 MTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAA 178
           ++  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+   
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPD 191

Query: 179 DHIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
              +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 192 QQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/222 (36%), Positives = 127/222 (57%), Gaps = 7/222 (3%)

Query: 62  MKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMT 120
           M++FVK  T +T T+ VEA    T++N+K  IQ KEGI  DQ  L++ GK L ED  T++
Sbjct: 1   MQIFVKTLTGKTITLDVEA--SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLS 57

Query: 121 SMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADH 180
             NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+     
Sbjct: 58  DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQ 117

Query: 181 IMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRD 237
            +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + +
Sbjct: 118 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIEN 177

Query: 238 VKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 178 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 78/223 (34%), Positives = 117/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + L+VE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITLDV+  +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           + V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|320163196|gb|EFW40095.1| polyubiquitin 5 [Capsaspora owczarzaki ATCC 30864]
          Length = 228

 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/223 (38%), Positives = 131/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + L+V+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + L+VE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITLDV+  +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/209 (40%), Positives = 126/209 (60%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T ++     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 78/221 (35%), Positives = 125/221 (56%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-DVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 78/223 (34%), Positives = 117/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + L+VE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITLDV+  +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           + V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|226477468|emb|CAX72428.1| ubiquitin C [Schistosoma japonicum]
          Length = 229

 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 128/209 (61%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLPL 221



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 87/223 (39%), Positives = 131/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STL +VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLPLVL 223



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 126/221 (57%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 118/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLPLVL 223


>gi|302393782|sp|P23324.2|UBIQP_EUPEU RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|159038|gb|AAA62225.1| ubiquitin [Euplotes eurystomus]
          Length = 229

 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/223 (39%), Positives = 129/223 (57%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + L+V+ S  I +VK  +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLDVEQSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + L+VE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEQSDTIDNVKTKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITLDV+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEQSDTIDNVKT 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 85/209 (40%), Positives = 123/209 (58%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V++S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDVEQSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T ++     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LDVEQSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VK  +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEQSDTIDNVKTKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 80/221 (36%), Positives = 123/221 (55%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-DVEQSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEQSDTIDNVKTKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + L+VE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEQSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 219



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 116/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + L+VE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLDVEQSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITLDV+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEQSDTIDNVKTKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEQSDTIDNVKT 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           + V++S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LDVEQSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222


>gi|405978203|gb|EKC42613.1| Ubiquitin [Crassostrea gigas]
          Length = 222

 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 128/209 (61%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 8   LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 67

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 68  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 125

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 126 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 185

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 186 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 214



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 84/215 (39%), Positives = 127/215 (59%), Gaps = 6/215 (2%)

Query: 148 TGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLE 207
           TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+++ E  L 
Sbjct: 2   TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 61

Query: 208 M---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEA 264
           +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE 
Sbjct: 62  LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 121

Query: 265 CKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQT 321
            +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   
Sbjct: 122 GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 181

Query: 322 PLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 182 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 216



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 78/213 (36%), Positives = 120/213 (56%), Gaps = 5/213 (2%)

Query: 70  TNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESI 129
           T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES 
Sbjct: 2   TGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKEST 59

Query: 130 IHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKL 189
           +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+L
Sbjct: 60  LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 119

Query: 190 EDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANII 246
           ED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +  
Sbjct: 120 EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 179

Query: 247 DLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
            +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 180 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 212



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 74/211 (35%), Positives = 110/211 (52%), Gaps = 9/211 (4%)

Query: 225 VRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV--- 281
           + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   
Sbjct: 6   ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 65

Query: 282 LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVL 341
           L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L
Sbjct: 66  LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 125

Query: 342 ARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAV 395
           + YNIQK STLH+VL     +          +I+L +  S+  E  K K Q         
Sbjct: 126 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 185

Query: 396 KELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           + L+     L+D RTL+DY +     + LV 
Sbjct: 186 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 216



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 160 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 215


>gi|339233010|ref|XP_003381622.1| ubiquitin family protein [Trichinella spiralis]
 gi|316979542|gb|EFV62324.1| ubiquitin family protein [Trichinella spiralis]
          Length = 277

 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/223 (38%), Positives = 131/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S +I +VK  +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDSIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  + L+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRMLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKG 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 85/209 (40%), Positives = 126/209 (60%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDSIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K+ IQ KEGI  DQ  L++ GK L ED   +
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRML 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/264 (33%), Positives = 145/264 (54%), Gaps = 10/264 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  +++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDSIENVKGKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED + L+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRMLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    + F KT  G
Sbjct: 179 KGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMRNFGKT--G 236

Query: 296 KTITLDVQPYNTVQDVKVKLFDKL 319
           +T   +V+   T+  V ++  ++L
Sbjct: 237 QTAISEVESSRTIGCVNIQFRNQL 260



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 119/223 (53%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDSIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +  +L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRMLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKG 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 68/163 (41%), Positives = 98/163 (60%), Gaps = 5/163 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGRLV-DYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K+ I  KEGI  D   L FAG +LE GR++ DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRMLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTIT-LEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAI 162
           +  NI+ ES +HLV   +  +  F K  TG+    EV+ S  I
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMRNFGK--TGQTAISEVESSRTI 249


>gi|440796241|gb|ELR17350.1| polyubiquitin, putative [Acanthamoeba castellanii str. Neff]
          Length = 220

 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/220 (40%), Positives = 129/220 (58%), Gaps = 9/220 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAG 259
           ++ E  L +      IFV+T   + + LEVE    + +VK+ + +   +    Q L +AG
Sbjct: 61  IQKESTLHL------IFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAG 114

Query: 260 TKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLF 316
            +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK K+ 
Sbjct: 115 KQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQ 174

Query: 317 DKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 175 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 214



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/209 (40%), Positives = 120/209 (57%), Gaps = 12/209 (5%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH +    
Sbjct: 15  LEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLI---- 70

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
                FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 71  -----FVKTLTGKTITL-EVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 123

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 124 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQ 183

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 184 QRLIFAGKQLEDGRTLADYNIQKESTLHL 212



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/220 (35%), Positives = 116/220 (52%), Gaps = 12/220 (5%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK+ + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAG 332
           I+    L +      IFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++FAG
Sbjct: 61  IQKESTLHL------IFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAG 114

Query: 333 KRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ 392
           K+L +   LA YNIQK STLH+VL     +          +I+L +  S+  E  K K Q
Sbjct: 115 KQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQ 174

Query: 393 AA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
                    + L+     L+D RTLADY +     + LV 
Sbjct: 175 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 214



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 60/135 (44%), Positives = 82/135 (60%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 82  LEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 141

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 142 GGMQIFVKTLTGKTITL-EVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 199

Query: 120 TSMNIKSESIIHLVF 134
              NI+ ES +HLV 
Sbjct: 200 ADYNIQKESTLHLVL 214


>gi|118370596|ref|XP_001018499.1| Ubiquitin family protein [Tetrahymena thermophila]
 gi|89300266|gb|EAR98254.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
          Length = 228

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + L+++ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLDIEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + V L+VE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTVTLDVEASDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITLD++  +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDIEASDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/210 (40%), Positives = 128/210 (60%), Gaps = 5/210 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + ++ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDIEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
             M++FVK  T +T T+ VEA    T++N+K  IQ KEGI  DQ  L++ GK L ED  T
Sbjct: 75  GGMQIFVKTLTGKTVTLDVEA--SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 131

Query: 119 MTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAA 178
           ++  NI+ ES +HLV   +  + IFVK  TG+ + L+++ S  I +VKA +    G+   
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDIEASDTIENVKAKIQDKEGIPPD 191

Query: 179 DHIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
              +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 192 QQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 80/222 (36%), Positives = 127/222 (57%), Gaps = 7/222 (3%)

Query: 62  MKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMT 120
           M++FVK  T +T T+ +EA    T++N+K  IQ KEGI  DQ  L++ GK L ED  T++
Sbjct: 1   MQIFVKTLTGKTITLDIEA--SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLS 57

Query: 121 SMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADH 180
             NI+ ES +HLV   +  + IFVK  TG+ V L+V+ S  I +VKA +    G+     
Sbjct: 58  DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTVTLDVEASDTIENVKAKIQDKEGIPPDQQ 117

Query: 181 IMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRD 237
            +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L++E    + +
Sbjct: 118 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDIEASDTIEN 177

Query: 238 VKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 178 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 77/223 (34%), Positives = 117/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + L++E    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLDIEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKT+TLDV+  +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTVTLDVEASDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L I  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDIEASDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/136 (45%), Positives = 85/136 (62%), Gaps = 5/136 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
             M++FVK  T +T T+ +EA    T++N+K  IQ KEGI  DQ  L++ GK L ED  T
Sbjct: 151 GGMQIFVKTLTGKTITLDIEA--SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 207

Query: 119 MTSMNIKSESIIHLVF 134
           ++  NI+ ES +HLV 
Sbjct: 208 LSDYNIQKESTLHLVL 223


>gi|118370602|ref|XP_001018502.1| Ubiquitin family protein [Tetrahymena thermophila]
 gi|89300269|gb|EAR98257.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
          Length = 228

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + L+++ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLDIEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + V L+VE    + ++K  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTVTLDVEATDTIENIKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITLDV+  +T++++K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENIKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 87/210 (41%), Positives = 128/210 (60%), Gaps = 5/210 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + ++ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDIEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
             M++FVK  T +T T+ VEA    T++NIK  IQ KEGI  DQ  L++ GK L ED  T
Sbjct: 75  GGMQIFVKTLTGKTVTLDVEAT--DTIENIKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 131

Query: 119 MTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAA 178
           ++  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I ++KA +    G+   
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENIKAKIQDKEGIPPD 191

Query: 179 DHIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
              +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 192 QQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/223 (33%), Positives = 117/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + L++E    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLDIEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKT+TLDV+  +T++++K K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTVTLDVEATDTIENIKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENIKA 180

Query: 390 KFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 60/135 (44%), Positives = 83/135 (61%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ ++ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LDVEATDTIENIKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ +     T++NIK  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-DVESSDTIENIKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 209 SDYNIQKESTLHLVL 223


>gi|14596193|gb|AAK68824.1| Unknown protein [Arabidopsis thaliana]
          Length = 229

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/223 (39%), Positives = 129/223 (57%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVK   GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKPLPGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/209 (41%), Positives = 123/209 (58%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK   G+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKPLPGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 122/221 (55%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+    + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKPLPGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 219



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/227 (37%), Positives = 121/227 (53%), Gaps = 17/227 (7%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDP----SISLSISISEVKE 385
           FAGK+L +   LA YNIQK STLH+VL    R+     IF+ P    +I+L +  S+  +
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVL----RLRGGMQIFVKPLPGKTITLEVESSDTID 176

Query: 386 MAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
             K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222


>gi|323448851|gb|EGB04744.1| ubiquitin [Aureococcus anophagefferens]
          Length = 229

 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 86/223 (38%), Positives = 131/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + L+V+ S  I +VK  +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + L+VE    + +VK+ + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITLDV+P +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQ 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/209 (40%), Positives = 123/209 (58%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T ++  P  T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VK  +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 78/221 (35%), Positives = 125/221 (56%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +  P  T+ N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-DVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K+ + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/223 (34%), Positives = 118/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + L+VE    + +VK+ + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITLDV+P +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQ 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 34/56 (60%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           + V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|440791755|gb|ELR12993.1| polyubiquitin, putative [Acanthamoeba castellanii str. Neff]
 gi|440792103|gb|ELR13331.1| polyubiquitin, putative [Acanthamoeba castellanii str. Neff]
          Length = 220

 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/220 (39%), Positives = 129/220 (58%), Gaps = 9/220 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK+ + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLF 316
           +AG +LE  +TLA Y I+    L +      IFVKT  GKTITL+V+  +T+++VK K+ 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHL------IFVKTLTGKTITLEVESSDTIENVKQKIQ 174

Query: 317 DKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 175 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 214



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/209 (40%), Positives = 121/209 (57%), Gaps = 12/209 (5%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HL         IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 133 ADYNIQKESTLHL---------IFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQ 183

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 184 QRLIFAGKQLEDGRTLADYNIQKESTLHL 212



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/218 (37%), Positives = 122/218 (55%), Gaps = 8/218 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEI 241
           +I+ GK+LED +TLA Y+++ E  L +      IFV+T   + + LEVE    + +VK+ 
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHL------IFVKTLTGKTITLEVESSDTIENVKQK 172

Query: 242 VANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 173 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 210



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 117/223 (52%), Gaps = 18/223 (8%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK+ + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   LA YNIQK STLH++   +             +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLIFVKT---------LTGKTITLEVESSDTIENVKQ 171

Query: 390 KFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 172 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 214



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 158 LEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 213


>gi|326427340|gb|EGD72910.1| ubiquitin [Salpingoeca sp. ATCC 50818]
          Length = 220

 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 86/220 (39%), Positives = 131/220 (59%), Gaps = 9/220 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S +I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAG 259
           ++ E  L +      IFV+T   + + LEVE    + +VK  + +   +    Q L +AG
Sbjct: 61  IQKESTLHL------IFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAG 114

Query: 260 TKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLF 316
            +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +++++VK K+ 
Sbjct: 115 KQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQ 174

Query: 317 DKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 175 DKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 214



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/209 (41%), Positives = 125/209 (59%), Gaps = 12/209 (5%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +    
Sbjct: 15  LEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLI---- 70

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
                FVK  T +T T+ E  P  +++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 71  -----FVKTLTGKTITL-EVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 123

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S +I +VKA +    G+    
Sbjct: 124 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQ 183

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 184 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 212



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 76/220 (34%), Positives = 116/220 (52%), Gaps = 12/220 (5%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAG 332
           I+    L +      IFVKT  GKTITL+V+P +++++VK K+ DK   P   Q ++FAG
Sbjct: 61  IQKESTLHL------IFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAG 114

Query: 333 KRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ 392
           K+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K K Q
Sbjct: 115 KQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQ 174

Query: 393 ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
                    + L+     L+D RTL+DY +     + LV 
Sbjct: 175 DKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 214



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 85/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 82  LEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 141

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  +++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 142 GGMQIFVKTLTGKTITL-EVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 199

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 200 SDYNIQKESTLHLVL 214


>gi|224503947|gb|ACN53545.1| polyubiquitin-like protein [Piriformospora indica]
          Length = 229

 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/223 (39%), Positives = 128/223 (57%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I DVK  +    G+      +I+ GK+LED +TL+ YD
Sbjct: 1   MHIFVKTLTGKTITLEVESSDTIDDVKTNIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYD 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIF++T   + + LEVE    + DVK  + +   +    Q   
Sbjct: 61  IQKESTLHLVLRLRGGMQIFLKTLTGKTITLEVESSDTIDDVKTKIQDKEGIPPDQQRWI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLTGGMQIFVKTLTGKTITLEVESSDTIDNVKT 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/209 (39%), Positives = 122/209 (58%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I ++K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDDVKTNIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYDIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++F+K  T +T T+ E     T+ ++KT IQ KEGI  DQ   ++ GK L ED  T+
Sbjct: 75  GGMQIFLKTLTGKTITL-EVESSDTIDDVKTKIQDKEGIPPDQQRWIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV      + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLTGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/223 (34%), Positives = 115/223 (51%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           + IFV+T   + + LEVE    + DVK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MHIFVKTLTGKTITLEVESSDTIDDVKTNIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYD 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIF+KT  GKTITL+V+  +T+ DVK K+ DK   P   Q  +
Sbjct: 61  IQKESTLHLVLRLRGGMQIFLKTLTGKTITLEVESSDTIDDVKTKIQDKEGIPPDQQRWI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL  +  +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLTGGMQIFVKTLTGKTITLEVESSDTIDNVKT 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 59/135 (43%), Positives = 81/135 (60%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I ++K  I  KEGI  D     FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIDDVKTKIQDKEGIPPDQQRWIFAGKQLEDGRTLSDYNIQKESTLHLVLRLT 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 209 SDYNIQKESTLHLVL 223


>gi|357474765|ref|XP_003607668.1| Multidrug resistance protein ABC transporter family [Medicago
           truncatula]
 gi|355508723|gb|AES89865.1| Multidrug resistance protein ABC transporter family [Medicago
           truncatula]
          Length = 497

 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/232 (40%), Positives = 135/232 (58%), Gaps = 6/232 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 234 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 293

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 294 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 351

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 352 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 411

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLE 228
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LE
Sbjct: 412 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 463



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 90/223 (40%), Positives = 130/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 220 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 279

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 280 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 339

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 340 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 399

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 400 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 442



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/247 (38%), Positives = 139/247 (56%), Gaps = 8/247 (3%)

Query: 61  EMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMT 120
           +M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+ 
Sbjct: 219 KMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLA 276

Query: 121 SMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADH 180
             NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+     
Sbjct: 277 DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ 336

Query: 181 IMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRD 237
            +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +
Sbjct: 337 RLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDN 396

Query: 238 VKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWG 294
           VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  
Sbjct: 397 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLT 456

Query: 295 GKTITLD 301
           GKTITL+
Sbjct: 457 GKTITLE 463



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/233 (36%), Positives = 120/233 (51%), Gaps = 11/233 (4%)

Query: 205 LLEMFPSS--IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKL 262
           LL  F  S  +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +L
Sbjct: 210 LLRQFYDSFKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL 269

Query: 263 EACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKL 319
           E  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK 
Sbjct: 270 EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 329

Query: 320 QTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSIS 379
             P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +I+L + 
Sbjct: 330 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 389

Query: 380 ISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
            S+  +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 390 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 442


>gi|357440433|ref|XP_003590494.1| Ubiquitin [Medicago truncatula]
 gi|355479542|gb|AES60745.1| Ubiquitin [Medicago truncatula]
          Length = 312

 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/222 (40%), Positives = 129/222 (58%), Gaps = 6/222 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 124/209 (59%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 123/221 (55%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 219



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 78/213 (36%), Positives = 113/213 (53%), Gaps = 9/213 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 390 KFQAA------VKELLVDQVALQDDRTLADYGM 416
           K Q         + L+     L+D RTLADY +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 78/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELL 399
           IQK STLH+VL     +          +I+L +  S+  +  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTLADY +     + LV 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVL 147



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222


>gi|357474767|ref|XP_003607669.1| Multidrug resistance protein ABC transporter family [Medicago
           truncatula]
 gi|355508724|gb|AES89866.1| Multidrug resistance protein ABC transporter family [Medicago
           truncatula]
          Length = 448

 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 90/223 (40%), Positives = 130/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 220 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 279

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 280 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 339

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 340 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 399

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 400 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 442



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 124/209 (59%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 234 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 293

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 294 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 351

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 352 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 411

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 412 QRLIFAGKQLEDGRTLADYNIQKESTLHL 440



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 83/222 (37%), Positives = 124/222 (55%), Gaps = 5/222 (2%)

Query: 61  EMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMT 120
           +M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+ 
Sbjct: 219 KMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLA 276

Query: 121 SMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADH 180
             NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+     
Sbjct: 277 DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ 336

Query: 181 IMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRD 237
            +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +
Sbjct: 337 RLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDN 396

Query: 238 VKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 397 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 438



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 84/233 (36%), Positives = 120/233 (51%), Gaps = 11/233 (4%)

Query: 205 LLEMFPSS--IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKL 262
           LL  F  S  +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +L
Sbjct: 210 LLRQFYDSFKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL 269

Query: 263 EACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKL 319
           E  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK 
Sbjct: 270 EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 329

Query: 320 QTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSIS 379
             P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +I+L + 
Sbjct: 330 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 389

Query: 380 ISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
            S+  +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 390 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 442



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 386 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 441


>gi|402224638|gb|EJU04700.1| polyubiquitin UbiD/Ubi4 [Dacryopinax sp. DJM-731 SS1]
          Length = 229

 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 87/223 (39%), Positives = 130/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 87/209 (41%), Positives = 125/209 (59%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/221 (36%), Positives = 124/221 (56%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 77/223 (34%), Positives = 116/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|330805713|ref|XP_003290823.1| hypothetical protein DICPUDRAFT_92560 [Dictyostelium purpureum]
 gi|325079033|gb|EGC32654.1| hypothetical protein DICPUDRAFT_92560 [Dictyostelium purpureum]
          Length = 229

 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 86/223 (38%), Positives = 130/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKT 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 86/209 (41%), Positives = 126/209 (60%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T++N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 81/221 (36%), Positives = 125/221 (56%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+KT IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/211 (36%), Positives = 113/211 (53%), Gaps = 9/211 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKT 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADY 414
           K Q         + L+     L+D RTL+DY
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 211



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|92790178|emb|CAI83758.1| Polyubiqutin 5 [Polyplastron multivesiculatum]
          Length = 220

 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 87/214 (40%), Positives = 127/214 (59%), Gaps = 6/214 (2%)

Query: 149 GEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
           G+ + LEV+ S  I +VKA +    G+      +I+ GK+LED++TLA Y+++ E  L +
Sbjct: 1   GKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 60

Query: 209 ---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEAC 265
                  +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  
Sbjct: 61  VLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDN 120

Query: 266 KTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTP 322
           +TLA Y I+    L +   L    QIFVKT  GKTITL+V+P +T+ +VK K+ DK   P
Sbjct: 121 RTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIP 180

Query: 323 LHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
              Q ++FAGK+L +N  LA YNIQK STLH+VL
Sbjct: 181 PDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVL 214



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 125/209 (59%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE  R L DY I+  STLH + +  
Sbjct: 6   LEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLR 65

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 66  GGMQIFVKTLTGKTIT-LEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTL 123

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 124 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQ 183

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED++TLA Y+++ E  L +
Sbjct: 184 QRLIFAGKQLEDNRTLADYNIQKESTLHL 212



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 77/207 (37%), Positives = 115/207 (55%), Gaps = 4/207 (1%)

Query: 76  VVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFC 135
            +E  P  T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV  
Sbjct: 5   TLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNIQKESTLHLVLR 63

Query: 136 PKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTL 195
            +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED++TL
Sbjct: 64  LRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTL 123

Query: 196 AFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGN 252
           A Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    
Sbjct: 124 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQ 183

Query: 253 QDLFYAGTKLEACKTLASYGIKNNYVL 279
           Q L +AG +LE  +TLA Y I+    L
Sbjct: 184 QRLIFAGKQLEDNRTLADYNIQKESTL 210



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 77/211 (36%), Positives = 111/211 (52%), Gaps = 9/211 (4%)

Query: 225 VRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV--- 281
           + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   
Sbjct: 4   ITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 63

Query: 282 LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVL 341
           L    QIFVKT  GKTITL+V+P +T+ +VK K+ DK   P   Q ++FAGK+L +N  L
Sbjct: 64  LRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTL 123

Query: 342 ARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAV 395
           A YNIQK STLH+VL     +          +I+L +  S+  +  K K Q         
Sbjct: 124 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQ 183

Query: 396 KELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           + L+     L+D+RTLADY +     + LV 
Sbjct: 184 QRLIFAGKQLEDNRTLADYNIQKESTLHLVL 214



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE  R L DY I+  STLH +
Sbjct: 158 LEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLV 213


>gi|290984061|ref|XP_002674746.1| polyubiquitin [Naegleria gruberi]
 gi|284088338|gb|EFC42002.1| polyubiquitin [Naegleria gruberi]
          Length = 229

 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ +  I +VK+ +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENVKS 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 83/209 (39%), Positives = 128/209 (61%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ ++ I+N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T++N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ +  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 126/221 (57%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ +  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 77/223 (34%), Positives = 117/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  ++  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENVKS 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ ++ I+N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|302393786|sp|P22589.2|UBIQP_PHYIN RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|3176|emb|CAA39250.1| ubiquitin [Phytophthora infestans]
 gi|348684114|gb|EGZ23929.1| hypothetical protein PHYSODRAFT_284823 [Phytophthora sojae]
          Length = 229

 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 132/223 (59%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + L+V+ S +I +VK  +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + L+VE    + +VK+ + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITLDV+P +++ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQ 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/209 (39%), Positives = 124/209 (59%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T ++  P  ++ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S +I +VK  +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 77/221 (34%), Positives = 126/221 (57%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +  P  ++ N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-DVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S +I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K+ + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 77/223 (34%), Positives = 118/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + L+VE    + +VK+ + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITLDV+P +++ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQ 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 34/56 (60%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           + V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|307193107|gb|EFN76024.1| Ubiquitin [Harpegnathos saltator]
          Length = 229

 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 130/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFV+   G+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVRTLAGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/209 (41%), Positives = 127/209 (60%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 124/221 (56%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FV+    +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVRTLAGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 117/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFVRT   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVRTLAGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|384496533|gb|EIE87024.1| polyubiquitin [Rhizopus delemar RA 99-880]
          Length = 229

 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 132/223 (59%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S +I +VK  +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDSIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK+ + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKQKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +++++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKQ 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 84/209 (40%), Positives = 126/209 (60%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDSIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     +++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDSIENVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S +I +VK  +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKQKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 126/221 (57%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     +++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDSIENVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S +I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKQKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K+ + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/223 (34%), Positives = 118/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK+ + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDSIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +++++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKQKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKQ 180

Query: 390 KFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVESSDSIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|46128781|ref|XP_388944.1| hypothetical protein FG08768.1 [Gibberella zeae PH-1]
 gi|189190970|ref|XP_001931824.1| ubiquitin [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|330938030|ref|XP_003305664.1| hypothetical protein PTT_18575 [Pyrenophora teres f. teres 0-1]
 gi|398405616|ref|XP_003854274.1| hypothetical protein MYCGRDRAFT_57170 [Zymoseptoria tritici IPO323]
 gi|187973430|gb|EDU40929.1| ubiquitin [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|311317170|gb|EFQ86204.1| hypothetical protein PTT_18575 [Pyrenophora teres f. teres 0-1]
 gi|339474157|gb|EGP89250.1| hypothetical protein MYCGRDRAFT_57170 [Zymoseptoria tritici IPO323]
 gi|344301515|gb|EGW31827.1| polyubiquitin [Spathaspora passalidarum NRRL Y-27907]
 gi|346970979|gb|EGY14431.1| ubiquitin [Verticillium dahliae VdLs.17]
 gi|358394958|gb|EHK44351.1| hypothetical protein TRIATDRAFT_300588 [Trichoderma atroviride IMI
           206040]
 gi|401882407|gb|EJT46666.1| hypothetical protein A1Q1_04737 [Trichosporon asahii var. asahii
           CBS 2479]
 gi|408390396|gb|EKJ69797.1| hypothetical protein FPSE_10045 [Fusarium pseudograminearum CS3096]
 gi|429860337|gb|ELA35078.1| ubiquitin [Colletotrichum gloeosporioides Nara gc5]
 gi|449302308|gb|EMC98317.1| hypothetical protein BAUCODRAFT_32336 [Baudoinia compniacensis UAMH
           10762]
 gi|452843190|gb|EME45125.1| hypothetical protein DOTSEDRAFT_70987 [Dothistroma septosporum
           NZE10]
          Length = 229

 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 86/223 (38%), Positives = 130/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK+ +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/209 (40%), Positives = 126/209 (60%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/221 (36%), Positives = 125/221 (56%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/223 (34%), Positives = 116/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|625174|gb|AAC84175.1| ubiquitin [Artemia franciscana]
          Length = 225

 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 87/204 (42%), Positives = 124/204 (60%), Gaps = 3/204 (1%)

Query: 6   SEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKL 64
           S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +    M++
Sbjct: 3   SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 62

Query: 65  FVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNI 124
           FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++  NI
Sbjct: 63  FVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNI 120

Query: 125 KSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIY 184
           + ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+
Sbjct: 121 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF 180

Query: 185 EGKKLEDSKTLAFYDMKDECLLEM 208
            GK+LED +TL+ Y+++ E  L +
Sbjct: 181 AGKQLEDGRTLSDYNIQKESTLHL 204



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/204 (38%), Positives = 119/204 (58%), Gaps = 6/204 (2%)

Query: 159 SFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQI 215
           S  I +VKA +    G+      +I+ GK+LED +TL+ Y+++ E  L +       +QI
Sbjct: 3   SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 62

Query: 216 FVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKN 275
           FV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y I+ 
Sbjct: 63  FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 122

Query: 276 NYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAG 332
              L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAG
Sbjct: 123 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAG 182

Query: 333 KRLFENHVLARYNIQKHSTLHMVL 356
           K+L +   L+ YNIQK STLH+VL
Sbjct: 183 KQLEDGRTLSDYNIQKESTLHLVL 206



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/202 (36%), Positives = 114/202 (56%), Gaps = 4/202 (1%)

Query: 81  PYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEIL 140
           P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV   +  +
Sbjct: 2   PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGM 60

Query: 141 SIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDM 200
            IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y++
Sbjct: 61  QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 120

Query: 201 KDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFY 257
           + E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L +
Sbjct: 121 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF 180

Query: 258 AGTKLEACKTLASYGIKNNYVL 279
           AG +LE  +TL+ Y I+    L
Sbjct: 181 AGKQLEDGRTLSDYNIQKESTL 202



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 105/202 (51%), Gaps = 9/202 (4%)

Query: 234 VVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFV 290
            + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFV
Sbjct: 5   TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 64

Query: 291 KTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHS 350
           KT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK S
Sbjct: 65  KTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 124

Query: 351 TLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVA 404
           TLH+VL     +          +I+L +  S+  E  K K Q         + L+     
Sbjct: 125 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ 184

Query: 405 LQDDRTLADYGMDLSEKVVLVF 426
           L+D RTL+DY +     + LV 
Sbjct: 185 LEDGRTLSDYNIQKESTLHLVL 206



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/135 (45%), Positives = 85/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 74  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 133

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 134 GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 191

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 192 SDYNIQKESTLHLVL 206



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 6/130 (4%)

Query: 303 QPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRI 362
           +P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +
Sbjct: 1   EPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 60

Query: 363 IELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGM 416
                     +I+L +  S+  E  K K Q         + L+     L+D RTL+DY +
Sbjct: 61  QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 120

Query: 417 DLSEKVVLVF 426
                + LV 
Sbjct: 121 QKESTLHLVL 130


>gi|365764258|gb|EHN05782.1| Ubi4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
 gi|452984043|gb|EME83800.1| hypothetical protein MYCFIDRAFT_60610 [Pseudocercospora fijiensis
           CIRAD86]
          Length = 229

 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 86/223 (38%), Positives = 130/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK+ +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/209 (40%), Positives = 126/209 (60%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/221 (36%), Positives = 125/221 (56%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/223 (34%), Positives = 116/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|336271700|ref|XP_003350608.1| hypothetical protein SMAC_07925 [Sordaria macrospora k-hell]
 gi|380089527|emb|CCC12626.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 229

 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 86/223 (38%), Positives = 130/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK+ + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQ 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/209 (40%), Positives = 123/209 (58%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/221 (36%), Positives = 124/221 (56%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K+ + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/223 (34%), Positives = 117/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK+ + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQ 180

Query: 390 KFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|324525469|gb|ADY48551.1| Polyubiquitin, partial [Ascaris suum]
          Length = 263

 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 86/223 (38%), Positives = 129/223 (57%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + +FVK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+LED +TL  Y+
Sbjct: 1   MQLFVKTLTGKTITLEVEPSDTIENVKVKIQDKEGIPPDQQRLIFAGKQLEDGRTLLDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKT+TL+V+P + VQ VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTLTLEVEPSDAVQHVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L ++  L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDDRTLSDYNIQKESTLHLVL 223



 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 86/209 (41%), Positives = 128/209 (61%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L+DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKVKIQDKEGIPPDQQRLIFAGKQLEDGRTLLDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S A++ VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTLTLEVEPSDAVQHVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDDRTLSDYNIQKESTLHL 221



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 117/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +Q+FV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL  Y 
Sbjct: 1   MQLFVKTLTGKTITLEVEPSDTIENVKVKIQDKEGIPPDQQRLIFAGKQLEDGRTLLDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +++L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTLTLEVEPSDAVQHVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+DDRTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDDRTLSDYNIQKESTLHLVL 223



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 62/135 (45%), Positives = 84/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P   VQ++K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTLTL-EVEPSDAVQHVKAKIQDKEGIPPDQQRLIFAGKQL-EDDRTL 208

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 209 SDYNIQKESTLHLVL 223


>gi|365986434|ref|XP_003670049.1| hypothetical protein NDAI_0D04930 [Naumovozyma dairenensis CBS 421]
 gi|410082970|ref|XP_003959063.1| hypothetical protein KAFR_0I01470 [Kazachstania africana CBS 2517]
 gi|444321755|ref|XP_004181533.1| hypothetical protein TBLA_0G00670 [Tetrapisispora blattae CBS 6284]
 gi|343768818|emb|CCD24806.1| hypothetical protein NDAI_0D04930 [Naumovozyma dairenensis CBS 421]
 gi|372465653|emb|CCF59928.1| hypothetical protein KAFR_0I01470 [Kazachstania africana CBS 2517]
 gi|387514578|emb|CCH62014.1| hypothetical protein TBLA_0G00670 [Tetrapisispora blattae CBS 6284]
          Length = 229

 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 86/223 (38%), Positives = 130/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK+ +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/209 (40%), Positives = 126/209 (60%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/221 (36%), Positives = 125/221 (56%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/223 (34%), Positives = 116/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|15284030|dbj|BAB63443.1| ubiquitin 2 [Physarum polycephalum]
 gi|19909902|dbj|BAB87824.1| polyubiquitin [Physarum polycephalum]
          Length = 229

 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 86/223 (38%), Positives = 127/223 (56%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I  VK  +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    +  VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T++ VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIESVKT 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/209 (40%), Positives = 125/209 (59%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+++K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T++++KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I  VK  +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 80/221 (36%), Positives = 123/221 (55%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++++KT IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I  VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    +  V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIESV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/223 (34%), Positives = 115/223 (51%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    +  VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T++ VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIESVKT 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+++K  I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|773586|emb|CAA35579.1| ubiquitin [Tetrahymena pyriformis]
          Length = 264

 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 89/263 (33%), Positives = 148/263 (56%), Gaps = 8/263 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +      ++NIK  IQ KEGI SDQ  L++ GK L E+  T++ 
Sbjct: 1   MQIFVKTLTGKTVTL-DVASTDNIENIKQKIQDKEGIPSDQQRLIFAGKQL-EEGRTVSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + +FVK  TG+ + L+V  +  I ++KA +    G+ +    
Sbjct: 59  YNIQKESTVHLVLRLRGGMQVFVKTLTGKTITLDVAQTDNIENIKAKIQDKEGIPSDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +T++ Y+++ E  L +       +Q+FV+T   + + LEV     +  +
Sbjct: 119 LIFAGKQLEDGRTVSDYNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLEVNSSDNIESI 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  + ++ Y I+    L +   L    Q+FVKT  G
Sbjct: 179 KSKIQDKEGIPSDQQRLIFAGKQLEDGRNISDYNIQKESTLHLVLRLRGGMQVFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDK 318
           KTITLDV   + +++VK K+ DK
Sbjct: 239 KTITLDVDSSDNIENVKAKIQDK 261



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 87/243 (35%), Positives = 139/243 (57%), Gaps = 6/243 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGRLV-DYGIRNNSTLHFLHQNL 59
           + V  ++ I+N+K  I  KEGI  D   L FAG +LE GR V DY I+  ST+H + +  
Sbjct: 15  LDVASTDNIENIKQKIQDKEGIPSDQQRLIFAGKQLEEGRTVSDYNIQKESTVHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ +      ++NIK  IQ KEGI SDQ  L++ GK L ED  T+
Sbjct: 75  GGMQVFVKTLTGKTITL-DVAQTDNIENIKAKIQDKEGIPSDQQRLIFAGKQL-EDGRTV 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + +FVK  TG+ + LEV  S  I  +K+ +    G+ +  
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLEVNSSDNIESIKSKIQDKEGIPSDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED + ++ Y+++ E  L +       +Q+FV+T   + + L+V+    + 
Sbjct: 193 QRLIFAGKQLEDGRNISDYNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLDVDSSDNIE 252

Query: 237 DVK 239
           +VK
Sbjct: 253 NVK 255



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 138/259 (53%), Gaps = 6/259 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ V L+V  +  I ++K  +    G+ +    +I+ GK+LE+ +T++ Y+
Sbjct: 1   MQIFVKTLTGKTVTLDVASTDNIENIKQKIQDKEGIPSDQQRLIFAGKQLEEGRTVSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  + +       +Q+FV+T   + + L+V     + ++K  + +   +    Q L 
Sbjct: 61  IQKESTVHLVLRLRGGMQVFVKTLTGKTITLDVAQTDNIENIKAKIQDKEGIPSDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +T++ Y I+    L +   L    Q+FVKT  GKTITL+V   + ++ +K 
Sbjct: 121 FAGKQLEDGRTVSDYNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLEVNSSDNIESIKS 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   ++ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPSDQQRLIFAGKQLEDGRNISDYNIQKESTLHLVLRLRGGMQVFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ 392
           I+L +  S+  E  K K Q
Sbjct: 241 ITLDVDSSDNIENVKAKIQ 259



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/176 (40%), Positives = 105/176 (59%), Gaps = 3/176 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGRLV-DYGIRNNSTLHFLHQNL 59
           + V +++ I+N+KA I  KEGI  D   L FAG +LE GR V DY I+  STLH + +  
Sbjct: 91  LDVAQTDNIENIKAKIQDKEGIPSDQQRLIFAGKQLEDGRTVSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E      +++IK+ IQ KEGI SDQ  L++ GK L ED   +
Sbjct: 151 GGMQVFVKTLTGKTITL-EVNSSDNIESIKSKIQDKEGIPSDQQRLIFAGKQL-EDGRNI 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGV 175
           +  NI+ ES +HLV   +  + +FVK  TG+ + L+V  S  I +VKA +    G+
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLDVDSSDNIENVKAKIQDKEGI 264



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 113/213 (53%), Gaps = 9/213 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + V L+V     + ++K+ + +   +    Q L +AG +LE  +T++ Y 
Sbjct: 1   MQIFVKTLTGKTVTLDVASTDNIENIKQKIQDKEGIPSDQQRLIFAGKQLEEGRTVSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    + +   L    Q+FVKT  GKTITLDV   + ++++K K+ DK   P   Q ++
Sbjct: 61  IQKESTVHLVLRLRGGMQVFVKTLTGKTITLDVAQTDNIENIKAKIQDKEGIPSDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   ++ YNIQK STLH+VL     +          +I+L ++ S+  E  K 
Sbjct: 121 FAGKQLEDGRTVSDYNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLEVNSSDNIESIKS 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGM 416
           K Q      +  + L+     L+D R ++DY +
Sbjct: 181 KIQDKEGIPSDQQRLIFAGKQLEDGRNISDYNI 213


>gi|198424689|ref|XP_002119546.1| PREDICTED: similar to ubiquitin isoform 2 [Ciona intestinalis]
 gi|198424691|ref|XP_002119309.1| PREDICTED: similar to ubiquitin isoform 1 [Ciona intestinalis]
          Length = 229

 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 86/223 (38%), Positives = 131/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S +I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEASDSIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +++ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/209 (41%), Positives = 126/209 (60%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEASDSIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     ++ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEASDSIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S +I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 80/221 (36%), Positives = 125/221 (56%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     ++ N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEASDSIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S +I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 116/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEASDSIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +++ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIDNVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIDNVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVEASDSIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|68472143|ref|XP_719867.1| hypothetical protein CaO19.6771 [Candida albicans SC5314]
 gi|68472378|ref|XP_719750.1| hypothetical protein CaO19.14063 [Candida albicans SC5314]
 gi|3687425|emb|CAA76783.1| polyubiquitin [Candida albicans]
 gi|46441582|gb|EAL00878.1| hypothetical protein CaO19.14063 [Candida albicans SC5314]
 gi|46441708|gb|EAL01003.1| hypothetical protein CaO19.6771 [Candida albicans SC5314]
 gi|238881109|gb|EEQ44747.1| hypothetical protein CAWG_03035 [Candida albicans WO-1]
 gi|354545623|emb|CCE42351.1| hypothetical protein CPAR2_809000 [Candida parapsilosis]
          Length = 229

 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 86/223 (38%), Positives = 130/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK+ +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/209 (40%), Positives = 126/209 (60%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/221 (36%), Positives = 125/221 (56%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/223 (34%), Positives = 116/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|349592832|gb|AEP96154.1| ubiquitin C-like protein [Euplectes orix]
          Length = 224

 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 87/206 (42%), Positives = 127/206 (61%), Gaps = 3/206 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECL 205
             +I+ GK+LED +TL+ Y+++ + L
Sbjct: 193 QXLIFAGKQLEDGRTLSDYNIQKDPL 218



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/215 (38%), Positives = 125/215 (58%), Gaps = 6/215 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQK 348
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK
Sbjct: 181 KIQDKEGIPPDQQXLIFAGKQLEDGRTLSDYNIQK 215



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/218 (37%), Positives = 126/218 (57%), Gaps = 5/218 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNN 276
           K  + +   +    Q L +AG +LE  +TL+ Y I+ +
Sbjct: 179 KAKIQDKEGIPPDQQXLIFAGKQLEDGRTLSDYNIQKD 216



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 115/213 (53%), Gaps = 9/213 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGM 416
           K Q         + L+     L+D RTL+DY +
Sbjct: 181 KIQDKEGIPPDQQXLIFAGKQLEDGRTLSDYNI 213



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 80/147 (54%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|169607224|ref|XP_001797032.1| hypothetical protein SNOG_06667 [Phaeosphaeria nodorum SN15]
 gi|111065378|gb|EAT86498.1| hypothetical protein SNOG_06667 [Phaeosphaeria nodorum SN15]
          Length = 234

 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 86/223 (38%), Positives = 130/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK+ +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/209 (40%), Positives = 126/209 (60%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/221 (36%), Positives = 125/221 (56%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/223 (34%), Positives = 116/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|324525461|gb|ADY48550.1| Polyubiquitin, partial [Ascaris suum]
          Length = 263

 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 86/223 (38%), Positives = 129/223 (57%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + +FVK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+LED +TL  Y+
Sbjct: 1   MQLFVKTLTGKTITLEVEPSDTIENVKVKIQDKEGIPPDQQRLIFAGKQLEDGRTLLDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKT+TL+V+P + VQ VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTLTLEVEPSDAVQHVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L ++  L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDDRTLSDYNIQKESTLHLVL 223



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/209 (41%), Positives = 128/209 (61%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L+DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKVKIQDKEGIPPDQQRLIFAGKQLEDGRTLLDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S A++ VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTLTLEVEPSDAVQHVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDDRTLSDYNIQKESTLHL 221



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 117/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +Q+FV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL  Y 
Sbjct: 1   MQLFVKTLTGKTITLEVEPSDTIENVKVKIQDKEGIPPDQQRLIFAGKQLEDGRTLLDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +++L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTLTLEVEPSDAVQHVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+DDRTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDDRTLSDYNIQKESTLHLVL 223



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 67/164 (40%), Positives = 97/164 (59%), Gaps = 3/164 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P   VQ++K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTLTL-EVEPSDAVQHVKAKIQDKEGIPPDQQRLIFAGKQL-EDDRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIR 163
           +  NI+ ES +HLV   +  + +   A T   V  +V+ S +++
Sbjct: 209 SDYNIQKESTLHLVLRLRGGVRVSANAFTCGDVTPQVESSGSVK 252


>gi|302496049|ref|XP_003010029.1| polyubiquitin UbiD/Ubi4, putative [Arthroderma benhamiae CBS
           112371]
 gi|315043104|ref|XP_003170928.1| ubiquitin [Arthroderma gypseum CBS 118893]
 gi|327295188|ref|XP_003232289.1| polyubiquitin [Trichophyton rubrum CBS 118892]
 gi|291173564|gb|EFE29389.1| polyubiquitin UbiD/Ubi4, putative [Arthroderma benhamiae CBS
           112371]
 gi|311344717|gb|EFR03920.1| ubiquitin [Arthroderma gypseum CBS 118893]
 gi|326465461|gb|EGD90914.1| polyubiquitin [Trichophyton rubrum CBS 118892]
 gi|326473983|gb|EGD97992.1| polyubiquitin [Trichophyton tonsurans CBS 112818]
 gi|326480982|gb|EGE04992.1| ubiquitin [Trichophyton equinum CBS 127.97]
          Length = 229

 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 86/223 (38%), Positives = 129/223 (57%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKT 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/209 (41%), Positives = 124/209 (59%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/221 (36%), Positives = 124/221 (56%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 77/223 (34%), Positives = 116/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKT 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|302595947|sp|P0CG73.1|UBI1P_CANAL RecName: Full=Polyubiquitin; Contains: RecName:
           Full=Ubiquitin-related; Contains: RecName:
           Full=Ubiquitin; Flags: Precursor
 gi|1143188|gb|AAA84868.1| ubiquitin precursor [Candida albicans]
          Length = 229

 Score =  147 bits (371), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 87/223 (39%), Positives = 131/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK+ +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEMFPSS---IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +   S   +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRSRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 85/209 (40%), Positives = 127/209 (60%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + ++ 
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRSR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 80/221 (36%), Positives = 125/221 (56%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRSRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 116/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDVL---PSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L ++       QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRSRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|357474747|ref|XP_003607659.1| Ubiquitin [Medicago truncatula]
 gi|355508714|gb|AES89856.1| Ubiquitin [Medicago truncatula]
          Length = 259

 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/225 (40%), Positives = 130/225 (57%), Gaps = 6/225 (2%)

Query: 138 EILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAF 197
           E + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED + LA 
Sbjct: 27  EQMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRILAD 86

Query: 198 YDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQD 254
           Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q 
Sbjct: 87  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 146

Query: 255 LFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDV 311
           L +AG +LE  +TL  Y I+    L +   L    QIFV T  GKTITLDV+  +T+ DV
Sbjct: 147 LIFAGKQLEDGRTLGDYNIQKESTLHLVLRLRGGMQIFVNTLTGKTITLDVESSDTIADV 206

Query: 312 KVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ L +K+  PL    +V AGK+L +++ LA YNIQK STLHMVL
Sbjct: 207 KLTLEEKVGIPLDQVRVVIAGKQLKDSYTLAHYNIQKESTLHMVL 251



 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 89/217 (41%), Positives = 126/217 (58%), Gaps = 6/217 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 43  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRILADYNIQKESTLHLVLRLR 102

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 103 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 160

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFV   TG+ + L+V+ S  I DVK  +   VG+    
Sbjct: 161 GDYNIQKESTLHLVLRLRGGMQIFVNTLTGKTITLDVESSDTIADVKLTLEEKVGIPLDQ 220

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEMFPSSIQIF 216
             ++  GK+L+DS TLA Y+++ E  L M    +Q+F
Sbjct: 221 VRVVIAGKQLKDSYTLAHYNIQKESTLHMV---LQVF 254



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 80/229 (34%), Positives = 122/229 (53%), Gaps = 5/229 (2%)

Query: 61  EMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMT 120
           +M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED   + 
Sbjct: 28  QMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRILA 85

Query: 121 SMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADH 180
             NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+     
Sbjct: 86  DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ 145

Query: 181 IMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRD 237
            +I+ GK+LED +TL  Y+++ E  L +       +QIFV T   + + L+VE    + D
Sbjct: 146 RLIFAGKQLEDGRTLGDYNIQKESTLHLVLRLRGGMQIFVNTLTGKTITLDVESSDTIAD 205

Query: 238 VKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVLPSPF 286
           VK  +   + + L    +  AG +L+   TLA Y I+    L ++   F
Sbjct: 206 VKLTLEEKVGIPLDQVRVVIAGKQLKDSYTLAHYNIQKESTLHMVLQVF 254



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/137 (38%), Positives = 75/137 (54%), Gaps = 6/137 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +  +LA YN
Sbjct: 29  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRILADYN 88

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELL 399
           IQK STLH+VL     +          +I+L +  S+  +  K K Q         + L+
Sbjct: 89  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 148

Query: 400 VDQVALQDDRTLADYGM 416
                L+D RTL DY +
Sbjct: 149 FAGKQLEDGRTLGDYNI 165


>gi|164430972|gb|ABY55758.1| ubiquitin [Drosophila silvestris]
          Length = 222

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/202 (42%), Positives = 125/202 (61%), Gaps = 3/202 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 23  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 82

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 83  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 140

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 141 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 200

Query: 180 HIMIYEGKKLEDSKTLAFYDMK 201
             +I+ GK+LED +TL+ Y+++
Sbjct: 201 QRLIFAGKQLEDGRTLSDYNIQ 222



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/222 (37%), Positives = 127/222 (57%), Gaps = 6/222 (2%)

Query: 132 LVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLED 191
           LV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED
Sbjct: 1   LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 60

Query: 192 SKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDL 248
            +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +
Sbjct: 61  GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 120

Query: 249 SLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPY 305
               Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P 
Sbjct: 121 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPS 180

Query: 306 NTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQ 347
           +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQ
Sbjct: 181 DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 222



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 81/216 (37%), Positives = 125/216 (57%), Gaps = 5/216 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 9   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 66

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 67  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 126

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 127 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 186

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIK 274
           K  + +   +    Q L +AG +LE  +TL+ Y I+
Sbjct: 187 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 222



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 114/213 (53%), Gaps = 9/213 (4%)

Query: 211 SSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLAS 270
             +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ 
Sbjct: 7   GGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 66

Query: 271 YGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQS 327
           Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q 
Sbjct: 67  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 126

Query: 328 IVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMA 387
           ++FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  
Sbjct: 127 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 186

Query: 388 KVKFQ------AAVKELLVDQVALQDDRTLADY 414
           K K Q         + L+     L+D RTL+DY
Sbjct: 187 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 219



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 81/151 (53%), Gaps = 6/151 (3%)

Query: 282 LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVL 341
           L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L
Sbjct: 5   LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 64

Query: 342 ARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAV 395
           + YNIQK STLH+VL     +          +I+L +  S+  E  K K Q         
Sbjct: 65  SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 124

Query: 396 KELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           + L+     L+D RTL+DY +     + LV 
Sbjct: 125 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 155


>gi|35187449|gb|AAQ84316.1| fiber polyubiquitin [Gossypium barbadense]
          Length = 229

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 88/223 (39%), Positives = 128/223 (57%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STL +VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLPLVL 223



 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 87/209 (41%), Positives = 123/209 (58%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLPL 221



 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 84/221 (38%), Positives = 124/221 (56%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 219



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 116/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLPLVL 223



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 60/135 (44%), Positives = 80/135 (59%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVF 134
              NI+ ES + LV 
Sbjct: 209 ADYNIQKESTLPLVL 223


>gi|66807485|ref|XP_637465.1| hypothetical protein DDB_G0286907 [Dictyostelium discoideum AX4]
 gi|302595959|sp|P0CG77.1|UBIQD_DICDI RecName: Full=Polyubiquitin-D; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|167943|gb|AAA33265.1| ubiquitin [Dictyostelium discoideum]
 gi|167953|gb|AAA33270.1| ubiquitin [Dictyostelium discoideum]
 gi|60465881|gb|EAL63951.1| hypothetical protein DDB_G0286907 [Dictyostelium discoideum AX4]
          Length = 229

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/223 (38%), Positives = 130/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  + +++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/209 (41%), Positives = 126/209 (60%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E      ++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 80/221 (36%), Positives = 124/221 (56%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E      ++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/223 (34%), Positives = 116/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  + +++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|18405196|ref|NP_564675.1| polyubiquitin 12 [Arabidopsis thaliana]
 gi|122213849|sp|Q3E7K8.1|UBQ12_ARATH RecName: Full=Polyubiquitin 12; Contains: RecName:
           Full=Ubiquitin-related 1; Contains: RecName:
           Full=Ubiquitin-related 2; Contains: RecName:
           Full=Ubiquitin-related 3; Flags: Precursor
 gi|332195060|gb|AEE33181.1| polyubiquitin 12 [Arabidopsis thaliana]
          Length = 230

 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/223 (39%), Positives = 131/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IF+K  TG+   LEV+ S  I +VKA +  + G+    H +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++++  L +   F   +QIFV+T   + + LEVE    + ++K  + +   +    Q L 
Sbjct: 61  VQEDSTLHLLLRFRGGMQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK       Q ++FAGK+  +   LA YNIQK STLH+VL
Sbjct: 181 KIQDKEGISPDQQRLIFAGKQHEDGRTLADYNIQKESTLHLVL 223



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 87/209 (41%), Positives = 124/209 (59%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I   EGI  D   L FAG +LE GR L DY ++ +STLH L +  
Sbjct: 15  LEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYNVQEDSTLHLLLRFR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+S   
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGISPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+ ED +TLA Y+++ E  L +
Sbjct: 193 QRLIFAGKQHEDGRTLADYNIQKESTLHL 221



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/221 (34%), Positives = 122/221 (55%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++F+K  T +T  V+E     T+ N+K  IQ  EGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFLKTLTGKTK-VLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            N++ +S +HL+   +  + IFVK  TG+ + LEV+ S  I ++KA +    G+      
Sbjct: 59  YNVQEDSTLHLLLRFRGGMQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +S   Q L +AG + E  +TLA Y I+    L
Sbjct: 179 KAKIQDKEGISPDQQRLIFAGKQHEDGRTLADYNIQKESTL 219



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 78/224 (34%), Positives = 117/224 (52%), Gaps = 11/224 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIF++T   +   LEVE    + +VK  + +I  +      L +AG +LE  +TLA Y 
Sbjct: 1   MQIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDVL---PSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           ++ +  L +L       QIFVKT  GKTITL+V+  +T+ ++K K+ DK   P   Q ++
Sbjct: 61  VQEDSTLHLLLRFRGGMQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 390 KFQAAVKELLVDQVAL-------QDDRTLADYGMDLSEKVVLVF 426
           K Q   + +  DQ  L       +D RTLADY +     + LV 
Sbjct: 181 KIQDK-EGISPDQQRLIFAGKQHEDGRTLADYNIQKESTLHLVL 223



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+KA I  KEGIS D   L FAG + E GR L DY I+  STLH +
Sbjct: 167 LEVESSDTIDNVKAKIQDKEGISPDQQRLIFAGKQHEDGRTLADYNIQKESTLHLV 222


>gi|239788925|dbj|BAH71115.1| ACYPI006410 [Acyrthosiphon pisum]
          Length = 230

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S +I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +++++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK  TLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEFTLHLVL 223



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 86/209 (41%), Positives = 128/209 (61%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     +++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S +I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKEFTLHL 221



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/221 (36%), Positives = 127/221 (57%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     +++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S +I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+  + L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEFTL 219



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 75/211 (35%), Positives = 113/211 (53%), Gaps = 9/211 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +++++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADY 414
           K Q         + L+     L+D RTL+DY
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 211



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 79/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +++++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|388518367|gb|AFK47245.1| unknown [Medicago truncatula]
          Length = 233

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/209 (43%), Positives = 125/209 (59%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+KT IQ KEGI  DQ  LV+ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKTKIQDKEGIPPDQQRLVFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVKA TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKALTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA  +++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLADNNIQKESTLHL 221



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 88/223 (39%), Positives = 128/223 (57%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTIILEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLV 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVK   GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKALTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   LA  NIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADNNIQKESTLHLVL 223



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/221 (35%), Positives = 120/221 (54%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T  ++E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKT-IILEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +++ GK+LED +TLA Y+++ E  L +       +QIFV+    + + LEVE    + +V
Sbjct: 119 LVFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKALTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TLA   I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADNNIQKESTL 219



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 78/210 (37%), Positives = 111/210 (52%), Gaps = 9/210 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTIILEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q +V
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLV 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKALTGKTITLEVESSDTIDNVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLAD 413
           K Q         + L+     L+D RTLAD
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 210


>gi|167945|gb|AAA33266.1| ubiquitin [Dictyostelium discoideum]
          Length = 229

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/223 (38%), Positives = 129/223 (57%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG  + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGNTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  + +++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/209 (41%), Positives = 126/209 (60%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E      ++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 80/221 (36%), Positives = 123/221 (55%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T  T T+ E      ++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGNTITL-EVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/223 (34%), Positives = 115/223 (51%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T     + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGNTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  + +++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|339233042|ref|XP_003381638.1| ubiquitin family protein [Trichinella spiralis]
 gi|316979524|gb|EFV62308.1| ubiquitin family protein [Trichinella spiralis]
          Length = 274

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/232 (39%), Positives = 134/232 (57%), Gaps = 14/232 (6%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 24  LEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 83

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K+ IQ KEGI  DQ  L++ GK L ED   +
Sbjct: 84  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRML 141

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 142 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQ 201

Query: 180 HIMIYE--------GKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTP 220
             +I+         GK+LED +TLA Y+++ E  L +       +QIFV+TP
Sbjct: 202 QRLIFAEFMCMAFIGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTP 253



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 87/231 (37%), Positives = 130/231 (56%), Gaps = 14/231 (6%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 10  MQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 69

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 70  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLI 129

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  + L+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 130 FAGKQLEDGRMLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKG 189

Query: 314 KLFDKLQTPLHLQSIVFA--------GKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FA        GK+L +   LA YNIQK STLH+VL
Sbjct: 190 KIQDKEGIPPDQQRLIFAEFMCMAFIGKQLEDGRTLADYNIQKESTLHLVL 240



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 91/253 (35%), Positives = 139/253 (54%), Gaps = 16/253 (6%)

Query: 61  EMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMT 120
           +M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++
Sbjct: 9   KMQIFVKTLTGKTITL-EVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQL-EDGRTLS 66

Query: 121 SMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADH 180
             NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+     
Sbjct: 67  DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQ 126

Query: 181 IMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRD 237
            +I+ GK+LED + L+ Y+++ E  L +       +QIFV+T   + + LEVE    + +
Sbjct: 127 RLIFAGKQLEDGRMLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIEN 186

Query: 238 VKEIVANIIDLSLGNQDLFYA--------GTKLEACKTLASYGIKNNYVLDV---LPSPF 286
           VK  + +   +    Q L +A        G +LE  +TLA Y I+    L +   L    
Sbjct: 187 VKGKIQDKEGIPPDQQRLIFAEFMCMAFIGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 246

Query: 287 QIFVKTWGGKTIT 299
           QIFVKT  GK++T
Sbjct: 247 QIFVKTPTGKSLT 259



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 81/232 (34%), Positives = 120/232 (51%), Gaps = 19/232 (8%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 10  MQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 69

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 70  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLI 129

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +  +L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 130 FAGKQLEDGRMLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKG 189

Query: 390 KFQAAVKELLVDQV---------------ALQDDRTLADYGMDLSEKVVLVF 426
           K Q   + +  DQ                 L+D RTLADY +     + LV 
Sbjct: 190 KIQDK-EGIPPDQQRLIFAEFMCMAFIGKQLEDGRTLADYNIQKESTLHLVL 240



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/159 (41%), Positives = 94/159 (59%), Gaps = 11/159 (6%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGRLV-DYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K+ I  KEGI  D   L FAG +LE GR++ DY I+  STLH + +  
Sbjct: 100 LEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRMLSDYNIQKESTLHLVLRLR 159

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYD--------GKL 111
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++         GK 
Sbjct: 160 GGMQIFVKTLTGKTIT-LEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAEFMCMAFIGKQ 218

Query: 112 LKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGE 150
           L ED  T+   NI+ ES +HLV   +  + IFVK  TG+
Sbjct: 219 L-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTPTGK 256



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/155 (35%), Positives = 83/155 (53%), Gaps = 6/155 (3%)

Query: 278 VLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFE 337
           +++ +    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +
Sbjct: 2   IINRIHRKMQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLED 61

Query: 338 NHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ----- 392
              L+ YNIQK STLH+VL     +          +I+L +  S+  E  K K Q     
Sbjct: 62  GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGI 121

Query: 393 -AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
               + L+     L+D R L+DY +     + LV 
Sbjct: 122 PPDQQRLIFAGKQLEDGRMLSDYNIQKESTLHLVL 156


>gi|111218906|gb|ABH08754.1| ubiquitin [Arabidopsis thaliana]
          Length = 220

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 124/209 (59%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 5   LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 64

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 65  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 122

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 123 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 182

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 183 QRLIFAGKQLEDGRTLADYNIQKESTLHL 211



 Score =  140 bits (354), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 84/211 (39%), Positives = 122/211 (57%), Gaps = 6/211 (2%)

Query: 152 VNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM--- 208
           + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+++ E  L +   
Sbjct: 3   ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 62

Query: 209 FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTL 268
               +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL
Sbjct: 63  LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 122

Query: 269 ASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHL 325
           A Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   
Sbjct: 123 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 182

Query: 326 QSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 183 QRLIFAGKQLEDGRTLADYNIQKESTLHLVL 213



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 76/207 (36%), Positives = 113/207 (54%), Gaps = 4/207 (1%)

Query: 76  VVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFC 135
            +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV  
Sbjct: 4   TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLR 62

Query: 136 PKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTL 195
            +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL
Sbjct: 63  LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 122

Query: 196 AFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGN 252
           A Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    
Sbjct: 123 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 182

Query: 253 QDLFYAGTKLEACKTLASYGIKNNYVL 279
           Q L +AG +LE  +TLA Y I+    L
Sbjct: 183 QRLIFAGKQLEDGRTLADYNIQKESTL 209



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/211 (35%), Positives = 108/211 (51%), Gaps = 9/211 (4%)

Query: 225 VRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV--- 281
           + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   
Sbjct: 3   ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 62

Query: 282 LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVL 341
           L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L
Sbjct: 63  LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 122

Query: 342 ARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAV 395
           A YNIQK STLH+VL     +          +I+L +  S+  +  K K Q         
Sbjct: 123 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 182

Query: 396 KELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           + L+     L+D RTLADY +     + LV 
Sbjct: 183 QRLIFAGKQLEDGRTLADYNIQKESTLHLVL 213



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 49/137 (35%), Positives = 71/137 (51%), Gaps = 6/137 (4%)

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 1   KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 60

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 61  LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 120

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 121 TLADYNIQKESTLHLVL 137



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 157 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 212


>gi|111218908|gb|ABH08755.1| ubiquitin [Arabidopsis thaliana]
          Length = 221

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 124/209 (59%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 7   LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 66

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 67  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 124

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 125 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 184

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 185 QRLIFAGKQLEDGRTLADYNIQKESTLHL 213



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 86/215 (40%), Positives = 125/215 (58%), Gaps = 6/215 (2%)

Query: 148 TGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLE 207
           TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+++ E  L 
Sbjct: 1   TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 60

Query: 208 M---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEA 264
           +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE 
Sbjct: 61  LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 120

Query: 265 CKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQT 321
            +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   
Sbjct: 121 GRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGI 180

Query: 322 PLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 181 PPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 215



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 79/213 (37%), Positives = 117/213 (54%), Gaps = 5/213 (2%)

Query: 70  TNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESI 129
           T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES 
Sbjct: 1   TGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKEST 58

Query: 130 IHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKL 189
           +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+L
Sbjct: 59  LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL 118

Query: 190 EDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANII 246
           ED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +  
Sbjct: 119 EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 178

Query: 247 DLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
            +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 179 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 211



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/211 (35%), Positives = 108/211 (51%), Gaps = 9/211 (4%)

Query: 225 VRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV--- 281
           + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   
Sbjct: 5   ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 64

Query: 282 LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVL 341
           L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L
Sbjct: 65  LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 124

Query: 342 ARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAV 395
           A YNIQK STLH+VL     +          +I+L +  S+  +  K K Q         
Sbjct: 125 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 184

Query: 396 KELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           + L+     L+D RTLADY +     + LV 
Sbjct: 185 QRLIFAGKQLEDGRTLADYNIQKESTLHLVL 215



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 159 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 214


>gi|111218904|gb|ABH08753.1| ubiquitin [Arabidopsis thaliana]
          Length = 219

 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 124/209 (59%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 5   LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 64

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 65  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 122

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 123 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 182

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 183 QRLIFAGKQLEDGRTLADYNIQKESTLHL 211



 Score =  140 bits (354), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 84/211 (39%), Positives = 122/211 (57%), Gaps = 6/211 (2%)

Query: 152 VNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM--- 208
           + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+++ E  L +   
Sbjct: 3   ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 62

Query: 209 FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTL 268
               +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL
Sbjct: 63  LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 122

Query: 269 ASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHL 325
           A Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   
Sbjct: 123 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 182

Query: 326 QSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 183 QRLIFAGKQLEDGRTLADYNIQKESTLHLVL 213



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 76/207 (36%), Positives = 113/207 (54%), Gaps = 4/207 (1%)

Query: 76  VVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFC 135
            +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV  
Sbjct: 4   TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLR 62

Query: 136 PKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTL 195
            +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL
Sbjct: 63  LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 122

Query: 196 AFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGN 252
           A Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    
Sbjct: 123 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 182

Query: 253 QDLFYAGTKLEACKTLASYGIKNNYVL 279
           Q L +AG +LE  +TLA Y I+    L
Sbjct: 183 QRLIFAGKQLEDGRTLADYNIQKESTL 209



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/211 (35%), Positives = 108/211 (51%), Gaps = 9/211 (4%)

Query: 225 VRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV--- 281
           + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   
Sbjct: 3   ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 62

Query: 282 LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVL 341
           L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L
Sbjct: 63  LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 122

Query: 342 ARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAV 395
           A YNIQK STLH+VL     +          +I+L +  S+  +  K K Q         
Sbjct: 123 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 182

Query: 396 KELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           + L+     L+D RTLADY +     + LV 
Sbjct: 183 QRLIFAGKQLEDGRTLADYNIQKESTLHLVL 213



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 49/137 (35%), Positives = 71/137 (51%), Gaps = 6/137 (4%)

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 1   KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 60

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 61  LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 120

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 121 TLADYNIQKESTLHLVL 137



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 157 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 212


>gi|1684857|gb|AAB36546.1| polyubiquitin [Phaseolus vulgaris]
          Length = 215

 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 124/209 (59%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 1   LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 60

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 61  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 118

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 119 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 178

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 179 QRLIFAGKQLEDGRTLADYNIQKESTLHL 207



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 84/209 (40%), Positives = 121/209 (57%), Gaps = 6/209 (2%)

Query: 154 LEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FP 210
           LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+++ E  L +     
Sbjct: 1   LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 60

Query: 211 SSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLAS 270
             +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA 
Sbjct: 61  GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 120

Query: 271 YGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQS 327
           Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q 
Sbjct: 121 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 180

Query: 328 IVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 181 LIFAGKQLEDGRTLADYNIQKESTLHLVL 209



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 76/206 (36%), Positives = 113/206 (54%), Gaps = 4/206 (1%)

Query: 77  VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCP 136
           +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   
Sbjct: 1   LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRL 59

Query: 137 KEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLA 196
           +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA
Sbjct: 60  RGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 119

Query: 197 FYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQ 253
            Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q
Sbjct: 120 DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ 179

Query: 254 DLFYAGTKLEACKTLASYGIKNNYVL 279
            L +AG +LE  +TLA Y I+    L
Sbjct: 180 RLIFAGKQLEDGRTLADYNIQKESTL 205



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 107/209 (51%), Gaps = 9/209 (4%)

Query: 227 LEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LP 283
           LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L 
Sbjct: 1   LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 60

Query: 284 SPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLAR 343
              QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA 
Sbjct: 61  GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 120

Query: 344 YNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKE 397
           YNIQK STLH+VL     +          +I+L +  S+  +  K K Q         + 
Sbjct: 121 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 180

Query: 398 LLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           L+     L+D RTLADY +     + LV 
Sbjct: 181 LIFAGKQLEDGRTLADYNIQKESTLHLVL 209



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 153 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 208


>gi|6934302|gb|AAF31707.1|AF221858_1 polyubiquitin [Euphorbia esula]
          Length = 215

 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 124/209 (59%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 1   LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 60

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 61  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 118

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 119 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 178

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 179 QRLIFAGKQLEDGRTLADYNIQKESTLHL 207



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 84/209 (40%), Positives = 121/209 (57%), Gaps = 6/209 (2%)

Query: 154 LEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FP 210
           LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+++ E  L +     
Sbjct: 1   LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 60

Query: 211 SSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLAS 270
             +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA 
Sbjct: 61  GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 120

Query: 271 YGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQS 327
           Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q 
Sbjct: 121 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 180

Query: 328 IVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 181 LIFAGKQLEDGRTLADYNIQKESTLHLVL 209



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 76/206 (36%), Positives = 113/206 (54%), Gaps = 4/206 (1%)

Query: 77  VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCP 136
           +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   
Sbjct: 1   LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRL 59

Query: 137 KEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLA 196
           +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA
Sbjct: 60  RGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 119

Query: 197 FYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQ 253
            Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q
Sbjct: 120 DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ 179

Query: 254 DLFYAGTKLEACKTLASYGIKNNYVL 279
            L +AG +LE  +TLA Y I+    L
Sbjct: 180 RLIFAGKQLEDGRTLADYNIQKESTL 205



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 107/209 (51%), Gaps = 9/209 (4%)

Query: 227 LEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LP 283
           LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L 
Sbjct: 1   LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 60

Query: 284 SPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLAR 343
              QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA 
Sbjct: 61  GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 120

Query: 344 YNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKE 397
           YNIQK STLH+VL     +          +I+L +  S+  +  K K Q         + 
Sbjct: 121 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 180

Query: 398 LLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           L+     L+D RTLADY +     + LV 
Sbjct: 181 LIFAGKQLEDGRTLADYNIQKESTLHLVL 209



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 153 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 208


>gi|443922596|gb|ELU42015.1| polyubiquitin [Rhizoctonia solani AG-1 IA]
          Length = 681

 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 94/263 (35%), Positives = 142/263 (53%), Gaps = 12/263 (4%)

Query: 106 VYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEI------LSIFVKAATGEIVNLEVKHS 159
           +Y G    ED   +    ++     HL F    +      + IFVK  TG+ + LEV+ S
Sbjct: 413 IYVGHASLEDVVYVAENTMRRCIRTHLAFSSLRLPEIPTTMQIFVKTLTGKTITLEVESS 472

Query: 160 FAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIF 216
             I +VKA +    G+      +I+ GK+LED +TL+ Y+++ E  L +       +QIF
Sbjct: 473 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF 532

Query: 217 VRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNN 276
           V+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y I+  
Sbjct: 533 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 592

Query: 277 YVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGK 333
             L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK
Sbjct: 593 STLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK 652

Query: 334 RLFENHVLARYNIQKHSTLHMVL 356
           +L +   L+ YNIQK STLH+VL
Sbjct: 653 QLEDGRTLSDYNIQKESTLHLVL 675



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 87/209 (41%), Positives = 125/209 (59%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 467 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 526

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 527 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 584

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 585 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 644

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 645 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 673



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 92/276 (33%), Positives = 137/276 (49%), Gaps = 21/276 (7%)

Query: 171 SVVGVSAADHIMIYEG-KKLEDSKTLAFYDMKDECL----------LEMFPSSIQIFVRT 219
           +V  V   D I IY G   LED   +A   M+  C+          L   P+++QIFV+T
Sbjct: 401 TVTSVVWIDAISIYVGHASLEDVVYVAENTMR-RCIRTHLAFSSLRLPEIPTTMQIFVKT 459

Query: 220 PIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
              + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 460 LTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 519

Query: 280 DV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLF 336
            +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L 
Sbjct: 520 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 579

Query: 337 ENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ---- 392
           +   L+ YNIQK STLH+VL     +          +I+L +  S+  +  K K Q    
Sbjct: 580 DGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEG 639

Query: 393 --AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
                + L+     L+D RTL+DY +     + LV 
Sbjct: 640 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 675



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 619 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 674


>gi|57282601|emb|CAD27944.1| polyubiquitin-like [Oryza sativa]
          Length = 219

 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 88/207 (42%), Positives = 123/207 (59%), Gaps = 3/207 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIHQTS 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLL 206
             +I+ GK+LED +TLA Y+++ E  L
Sbjct: 193 KRLIFAGKQLEDGRTLADYNIQKESTL 219



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 85/217 (39%), Positives = 124/217 (57%), Gaps = 6/217 (2%)

Query: 142 IFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMK 201
           IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+++
Sbjct: 3   IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62

Query: 202 DECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYA 258
            E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L +A
Sbjct: 63  KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 122

Query: 259 GTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKL 315
           G +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+
Sbjct: 123 GKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 182

Query: 316 FDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTL 352
            DK       + ++FAGK+L +   LA YNIQK STL
Sbjct: 183 QDKEGIHQTSKRLIFAGKQLEDGRTLADYNIQKESTL 219



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 81/220 (36%), Positives = 123/220 (55%), Gaps = 5/220 (2%)

Query: 63  KLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSM 122
           ++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+   
Sbjct: 2   QIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADY 59

Query: 123 NIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIM 182
           NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      +
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119

Query: 183 IYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVK 239
           I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +VK
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 179

Query: 240 EIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
             + +   +   ++ L +AG +LE  +TLA Y I+    L
Sbjct: 180 AKIQDKEGIHQTSKRLIFAGKQLEDGRTLADYNIQKESTL 219



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/210 (37%), Positives = 111/210 (52%), Gaps = 9/210 (4%)

Query: 214 QIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGI 273
           QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y I
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61

Query: 274 KNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVF 330
           +    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++F
Sbjct: 62  QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 121

Query: 331 AGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVK 390
           AGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +  K K
Sbjct: 122 AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK 181

Query: 391 FQ------AAVKELLVDQVALQDDRTLADY 414
            Q         K L+     L+D RTLADY
Sbjct: 182 IQDKEGIHQTSKRLIFAGKQLEDGRTLADY 211



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 56/146 (38%), Positives = 78/146 (53%), Gaps = 6/146 (4%)

Query: 287 QIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNI 346
           QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNI
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61

Query: 347 QKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLV 400
           QK STLH+VL     +          +I+L +  S+  +  K K Q         + L+ 
Sbjct: 62  QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 121

Query: 401 DQVALQDDRTLADYGMDLSEKVVLVF 426
               L+D RTLADY +     + LV 
Sbjct: 122 AGKQLEDGRTLADYNIQKESTLHLVL 147


>gi|428175943|gb|EKX44830.1| ubiquitin [Guillardia theta CCMP2712]
          Length = 229

 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 89/223 (39%), Positives = 127/223 (56%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I  VK+ +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    +  VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDMVKSKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+  VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDMVKS 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/209 (40%), Positives = 122/209 (58%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I  +K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+  +K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I  VK+ +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDMVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/221 (36%), Positives = 121/221 (54%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+  +K+ IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I  VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDMVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    +  V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDMV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 219



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 115/223 (51%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    +  VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+  VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDMVKSKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +M K 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDMVKS 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I  +K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222


>gi|339232978|ref|XP_003381606.1| ubiquitin family protein [Trichinella spiralis]
 gi|316979561|gb|EFV62340.1| ubiquitin family protein [Trichinella spiralis]
          Length = 315

 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 86/207 (41%), Positives = 125/207 (60%), Gaps = 3/207 (1%)

Query: 3   VKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSE 61
           V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +    
Sbjct: 7   VEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 66

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 67  MQIFVKTLTGKTITL-EVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 124

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  + +VK  +    G+      
Sbjct: 125 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTVENVKGKIQDKEGIPPDQQR 184

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LEDS+TL+ Y+++ E  L +
Sbjct: 185 LIFAGKQLEDSRTLSDYNIQKESTLHL 211



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/207 (38%), Positives = 121/207 (58%), Gaps = 6/207 (2%)

Query: 156 VKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSS 212
           V+ S  I +VK  +    G+      +I+ GK+LED +TL+ Y+++ E  L +       
Sbjct: 7   VEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 66

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 67  MQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 126

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +TV++VK K+ DK   P   Q ++
Sbjct: 127 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTVENVKGKIQDKEGIPPDQQRLI 186

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L ++  L+ YNIQK STLH+VL
Sbjct: 187 FAGKQLEDSRTLSDYNIQKESTLHLVL 213



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 73/210 (34%), Positives = 108/210 (51%), Gaps = 9/210 (4%)

Query: 226 RLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---L 282
           R  VE    + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L
Sbjct: 4   RWAVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 63

Query: 283 PSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLA 342
               QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+
Sbjct: 64  RGGMQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 123

Query: 343 RYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVK 396
            YNIQK STLH+VL     +          +I+L +  S+  E  K K Q         +
Sbjct: 124 DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTVENVKGKIQDKEGIPPDQQ 183

Query: 397 ELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
            L+     L+D RTL+DY +     + LV 
Sbjct: 184 RLIFAGKQLEDSRTLSDYNIQKESTLHLVL 213



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/153 (42%), Positives = 92/153 (60%), Gaps = 3/153 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 81  LEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 140

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  TV+N+K  IQ KEGI  DQ  L++ GK L ED+ T+
Sbjct: 141 GGMQIFVKTLTGKTIT-LEVEPSDTVENVKGKIQDKEGIPPDQQRLIFAGKQL-EDSRTL 198

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIV 152
           +  NI+ ES +HLV   +    IF+     +I+
Sbjct: 199 SDYNIQKESTLHLVLRLRGGCGIFLSHRCWKIM 231


>gi|218198762|gb|EEC81189.1| hypothetical protein OsI_24195 [Oryza sativa Indica Group]
          Length = 223

 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 88/208 (42%), Positives = 123/208 (59%), Gaps = 3/208 (1%)

Query: 2   KVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLS 60
           +V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +   
Sbjct: 10  EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 69

Query: 61  EMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMT 120
            M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+ 
Sbjct: 70  GMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLA 127

Query: 121 SMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADH 180
             NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+     
Sbjct: 128 DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ 187

Query: 181 IMIYEGKKLEDSKTLAFYDMKDECLLEM 208
            +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 188 RLIFAGKQLEDGRTLADYNIQKESTLHL 215



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 83/212 (39%), Positives = 121/212 (57%), Gaps = 6/212 (2%)

Query: 151 IVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM-- 208
           +   EV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+++ E  L +  
Sbjct: 6   VATCEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 65

Query: 209 -FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKT 267
                +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +T
Sbjct: 66  RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 125

Query: 268 LASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLH 324
           LA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P  
Sbjct: 126 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD 185

Query: 325 LQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
            Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 186 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 217



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/207 (36%), Positives = 112/207 (54%), Gaps = 4/207 (1%)

Query: 76  VVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFC 135
             E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV  
Sbjct: 8   TCEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLR 66

Query: 136 PKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTL 195
            +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL
Sbjct: 67  LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 126

Query: 196 AFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGN 252
           A Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    
Sbjct: 127 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 186

Query: 253 QDLFYAGTKLEACKTLASYGIKNNYVL 279
           Q L +AG +LE  +TLA Y I+    L
Sbjct: 187 QRLIFAGKQLEDGRTLADYNIQKESTL 213



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 107/212 (50%), Gaps = 9/212 (4%)

Query: 224 IVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV-- 281
           +   EVE    + +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +  
Sbjct: 6   VATCEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 65

Query: 282 -LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHV 340
            L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   
Sbjct: 66  RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 125

Query: 341 LARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AA 394
           LA YNIQK STLH+VL     +          +I+L +  S+  +  K K Q        
Sbjct: 126 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD 185

Query: 395 VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
            + L+     L+D RTLADY +     + LV 
Sbjct: 186 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 217



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 81/135 (60%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 85  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 144

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 145 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 202

Query: 120 TSMNIKSESIIHLVF 134
              NI+ ES +HLV 
Sbjct: 203 ADYNIQKESTLHLVL 217


>gi|413926510|gb|AFW66442.1| putative ubiquitin family protein, partial [Zea mays]
          Length = 216

 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/204 (42%), Positives = 122/204 (59%), Gaps = 3/204 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDE 203
             +I+ GK+LED +TLA Y+++ E
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKE 216



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/216 (38%), Positives = 123/216 (56%), Gaps = 6/216 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKH 349
           K+ DK   P   Q ++FAGK+L +   LA YNIQK 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 216



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 82/216 (37%), Positives = 122/216 (56%), Gaps = 5/216 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIK 274
           K  + +   +    Q L +AG +LE  +TLA Y I+
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 214



 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 78/213 (36%), Positives = 113/213 (53%), Gaps = 9/213 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGM 416
           K Q         + L+     L+D RTLADY +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 78/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  +  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTLADY +     + LV 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVL 147


>gi|140083661|gb|ABO84843.1| ubiquitin B [Sus scrofa]
          Length = 209

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/196 (43%), Positives = 120/196 (61%), Gaps = 3/196 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTL 195
             +I+ GK+LED +TL
Sbjct: 193 QRLIFAGKQLEDGRTL 208



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 79/210 (37%), Positives = 121/210 (57%), Gaps = 5/210 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTL 268
           K  + +   +    Q L +AG +LE  +TL
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 208



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/208 (36%), Positives = 111/208 (53%), Gaps = 9/208 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTL 411
           K Q         + L+     L+D RTL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTL 208



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 80/147 (54%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|425780946|gb|EKV18932.1| hypothetical protein PDIP_25190 [Penicillium digitatum Pd1]
          Length = 233

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/209 (40%), Positives = 126/209 (60%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 19  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 78

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 79  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 136

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 137 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 196

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 197 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 225



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/215 (38%), Positives = 125/215 (58%), Gaps = 6/215 (2%)

Query: 148 TGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLE 207
           TG+ + LEV+ S  I +VK+ +    G+      +I+ GK+LED +TL+ Y+++ E  L 
Sbjct: 13  TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 72

Query: 208 M---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEA 264
           +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE 
Sbjct: 73  LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLED 132

Query: 265 CKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQT 321
            +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   
Sbjct: 133 GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGI 192

Query: 322 PLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 193 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 227



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 79/225 (35%), Positives = 123/225 (54%), Gaps = 9/225 (4%)

Query: 62  MKLFVKIP----TNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTA 117
           M +   IP    T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  
Sbjct: 1   MDILANIPLSLVTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGR 58

Query: 118 TMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSA 177
           T++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+  
Sbjct: 59  TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPP 118

Query: 178 ADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIV 234
               +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    
Sbjct: 119 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 178

Query: 235 VRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 223



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 108/211 (51%), Gaps = 9/211 (4%)

Query: 225 VRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV--- 281
           + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   
Sbjct: 17  ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 76

Query: 282 LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVL 341
           L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L
Sbjct: 77  LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTL 136

Query: 342 ARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAV 395
           + YNIQK STLH+VL     +          +I+L +  S+  +  K K Q         
Sbjct: 137 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 196

Query: 396 KELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           + L+     L+D RTL+DY +     + LV 
Sbjct: 197 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 227



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 171 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 226


>gi|353238378|emb|CCA70326.1| related to UBI4-Ubiquitin [Piriformospora indica DSM 11827]
          Length = 222

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/209 (41%), Positives = 124/209 (59%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 8   LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 67

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 68  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 125

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 126 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQ 185

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 186 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 214



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 80/211 (37%), Positives = 121/211 (57%), Gaps = 6/211 (2%)

Query: 152 VNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM--- 208
           + LEV+ S  I +VK  +    G+      +I+ GK+LED +TL+ Y+++ E  L +   
Sbjct: 6   ITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 65

Query: 209 FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTL 268
               +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL
Sbjct: 66  LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTL 125

Query: 269 ASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHL 325
           + Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   
Sbjct: 126 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQ 185

Query: 326 QSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 186 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 216



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/207 (35%), Positives = 114/207 (55%), Gaps = 4/207 (1%)

Query: 76  VVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFC 135
            +E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV  
Sbjct: 7   TLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLR 65

Query: 136 PKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTL 195
            +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+LED +TL
Sbjct: 66  LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTL 125

Query: 196 AFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGN 252
           + Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    
Sbjct: 126 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQ 185

Query: 253 QDLFYAGTKLEACKTLASYGIKNNYVL 279
           Q L +AG +LE  +TL+ Y I+    L
Sbjct: 186 QRLIFAGKQLEDGRTLSDYNIQKESTL 212



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 108/211 (51%), Gaps = 9/211 (4%)

Query: 225 VRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV--- 281
           + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   
Sbjct: 6   ITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 65

Query: 282 LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVL 341
           L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L
Sbjct: 66  LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTL 125

Query: 342 ARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAV 395
           + YNIQK STLH+VL     +          +I+L +  S+  +  K K Q         
Sbjct: 126 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQ 185

Query: 396 KELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           + L+     L+D RTL+DY +     + LV 
Sbjct: 186 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 216



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 70/136 (51%), Gaps = 6/136 (4%)

Query: 297 TITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           TITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 5   TITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 64

Query: 357 APSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRT 410
                +          +I+L +  S+  +  K K Q         + L+     L+D RT
Sbjct: 65  RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 124

Query: 411 LADYGMDLSEKVVLVF 426
           L+DY +     + LV 
Sbjct: 125 LSDYNIQKESTLHLVL 140



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 160 LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 215


>gi|56684130|gb|AAW22168.1| polyubiquitin [Monocercomonoides sp. PA203]
          Length = 229

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 126/223 (56%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+++  I  VK  +    G+      +I+ GK+LED +TL  Y+
Sbjct: 1   MQIFVKTLTGKTITLEVENADTIESVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLQDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    +  VK+ + +   +    Q L 
Sbjct: 61  IQKEATLHLVLRLRGGMQIFVKTLTGKTITLEVENADTIESVKQKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL  Y I+    L +   L    QIFVKT  GKTITL+V+  +T++ VK 
Sbjct: 121 FAGKQLEDGRTLQDYNIQKEATLHLVLRLRGGMQIFVKTLTGKTITLEVENADTIESVKQ 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L  YNIQK +TLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLQDYNIQKEATLHLVL 223



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 79/209 (37%), Positives = 123/209 (58%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ ++ I+++K  I  KEGI  D   L FAG +LE GR L DY I+  +TLH + +  
Sbjct: 15  LEVENADTIESVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLQDYNIQKEATLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T++++K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVENADTIESVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ E+ +HLV   +  + IFVK  TG+ + LEV+++  I  VK  +    G+    
Sbjct: 133 QDYNIQKEATLHLVLRLRGGMQIFVKTLTGKTITLEVENADTIESVKQKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL  Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLQDYNIQKEATLHL 221



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/221 (34%), Positives = 121/221 (54%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++++K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVENADTIESVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTLQD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ E+ +HLV   +  + IFVK  TG+ + LEV+++  I  VK  +    G+      
Sbjct: 59  YNIQKEATLHLVLRLRGGMQIFVKTLTGKTITLEVENADTIESVKQKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL  Y+++ E  L +       +QIFV+T   + + LEVE    +  V
Sbjct: 119 LIFAGKQLEDGRTLQDYNIQKEATLHLVLRLRGGMQIFVKTLTGKTITLEVENADTIESV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K+ + +   +    Q L +AG +LE  +TL  Y I+    L
Sbjct: 179 KQKIQDKEGIPPDQQRLIFAGKQLEDGRTLQDYNIQKEATL 219



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/211 (35%), Positives = 109/211 (51%), Gaps = 9/211 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    +  VK+ + +   +    Q L +AG +LE  +TL  Y 
Sbjct: 1   MQIFVKTLTGKTITLEVENADTIESVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLQDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T++ VK K+ DK   P   Q ++
Sbjct: 61  IQKEATLHLVLRLRGGMQIFVKTLTGKTITLEVENADTIESVKQKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L  YNIQK +TLH+VL     +          +I+L +  ++  E  K 
Sbjct: 121 FAGKQLEDGRTLQDYNIQKEATLHLVLRLRGGMQIFVKTLTGKTITLEVENADTIESVKQ 180

Query: 390 KFQAA------VKELLVDQVALQDDRTLADY 414
           K Q         + L+     L+D RTL DY
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLQDY 211


>gi|197129052|gb|ACH45550.1| putative ubiquitin C variant 1 [Taeniopygia guttata]
          Length = 245

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/202 (42%), Positives = 124/202 (61%), Gaps = 3/202 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L D  I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDDNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMK 201
             +I+ GK+LED +TL+ Y+++
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQ 214



 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 83/225 (36%), Positives = 126/225 (56%), Gaps = 6/225 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+  +
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDDN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAP 358
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK        AP
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKXVNSAPCPAP 225



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 83/227 (36%), Positives = 128/227 (56%), Gaps = 5/227 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  DNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVLPSP 285
           K  + +   +    Q L +AG +LE  +TL+ Y I+        P+P
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKXVNSAPCPAP 225



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 76/213 (35%), Positives = 114/213 (53%), Gaps = 9/213 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+   
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDDN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGM 416
           K Q         + L+     L+D RTL+DY +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 213



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 79/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+  N
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDDN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|429327043|gb|AFZ78850.1| polyubiquitin [Coptotermes formosanus]
          Length = 230

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/223 (38%), Positives = 126/223 (56%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ +  I DVKA +    G+      +I+ GK+LED  TL  Y 
Sbjct: 1   MQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYS 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ +  L +       +QIFV+T   + + LEVE    + DVK  + +   +    Q L 
Sbjct: 61  IQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE   TL  Y I+ +  L +   L    QIFVKT  GK ITL+V+P + ++DVK 
Sbjct: 121 FAGKQLEDGNTLQDYSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L + + L  Y+IQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVL 223



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 79/209 (37%), Positives = 122/209 (58%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ ++ I+++KA I  KEGI  D   L FAG +LE G  L DY I+ +STLH + +  
Sbjct: 15  LEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +  T +E  P   ++++K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKHIT-LEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQL-EDGNTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              +I+ +S +HLV   +  + IFVK  TG+ + LEV+ +  I DVKA +    G+    
Sbjct: 133 QDYSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED  TL  Y ++ +  L +
Sbjct: 193 QRLIFAGKQLEDGNTLQDYSIQKDSTLHL 221



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/221 (34%), Positives = 119/221 (53%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +  T+ E  P   ++++K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKHITL-EVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQL-EDGNTLQD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            +I+ +S +HLV   +  + IFVK  TG+ + LEV+ +  I DVKA +    G+      
Sbjct: 59  YSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED  TL  Y ++ +  L +       +QIFV+T   + + LEVE    + DV
Sbjct: 119 LIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE   TL  Y I+ +  L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTL 219



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 112/223 (50%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + DVK  + +   +    Q L +AG +LE   TL  Y 
Sbjct: 1   MQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYS 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+ +  L +   L    QIFVKT  GK ITL+V+P + ++DVK K+ DK   P   Q ++
Sbjct: 61  IQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L + + L  Y+IQK STLH+VL     +           I+L +  ++  E  K 
Sbjct: 121 FAGKQLEDGNTLQDYSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D  TL DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVL 223



 Score = 46.2 bits (108), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ ++ I+++KA I  KEGI  D   L FAG +LE G  L DY I+ +STLH +
Sbjct: 167 LEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLV 222


>gi|123445177|ref|XP_001311351.1| polyubiquitin [Trichomonas vaginalis G3]
 gi|121893157|gb|EAX98421.1| polyubiquitin, putative [Trichomonas vaginalis G3]
          Length = 229

 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 86/223 (38%), Positives = 126/223 (56%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ +  I DVKA +    G+      +I+ GK+LED  TL  Y 
Sbjct: 1   MQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYS 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ +  L +       +QIFV+T   + + LEVE    + DVK  + +   +    Q L 
Sbjct: 61  IQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE   TL  Y I+ +  L +   L    QIFVKT  GK ITL+V+P + ++DVK 
Sbjct: 121 FAGKQLEDGNTLQDYSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L + + L  Y+IQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVL 223



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 79/209 (37%), Positives = 122/209 (58%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ ++ I+++KA I  KEGI  D   L FAG +LE G  L DY I+ +STLH + +  
Sbjct: 15  LEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +  T +E  P   ++++K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKHIT-LEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQL-EDGNTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              +I+ +S +HLV   +  + IFVK  TG+ + LEV+ +  I DVKA +    G+    
Sbjct: 133 QDYSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED  TL  Y ++ +  L +
Sbjct: 193 QRLIFAGKQLEDGNTLQDYSIQKDSTLHL 221



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/221 (34%), Positives = 119/221 (53%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +  T+ E  P   ++++K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKHITL-EVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQL-EDGNTLQD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            +I+ +S +HLV   +  + IFVK  TG+ + LEV+ +  I DVKA +    G+      
Sbjct: 59  YSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED  TL  Y ++ +  L +       +QIFV+T   + + LEVE    + DV
Sbjct: 119 LIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE   TL  Y I+ +  L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTL 219



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 112/223 (50%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + DVK  + +   +    Q L +AG +LE   TL  Y 
Sbjct: 1   MQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYS 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+ +  L +   L    QIFVKT  GK ITL+V+P + ++DVK K+ DK   P   Q ++
Sbjct: 61  IQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L + + L  Y+IQK STLH+VL     +           I+L +  ++  E  K 
Sbjct: 121 FAGKQLEDGNTLQDYSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D  TL DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVL 223



 Score = 46.2 bits (108), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ ++ I+++KA I  KEGI  D   L FAG +LE G  L DY I+ +STLH +
Sbjct: 167 LEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLV 222


>gi|27734375|gb|AAM51216.1| polyubiquitin [Cercomonas sp. ATCC 50316]
          Length = 255

 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 85/219 (38%), Positives = 125/219 (57%), Gaps = 10/219 (4%)

Query: 148 TGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLE 207
           TG+ + L+V+ S  I  VK  +    G+      +I+ GK+LED +TLA Y+++ E  L 
Sbjct: 2   TGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 61

Query: 208 MF-----PSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKL 262
           +       S +QIFV+T   + + L+VE    +  VK+ + +   +    Q L +AG +L
Sbjct: 62  LVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQL 121

Query: 263 EACKTLASYGIKNNYVLDVL-----PSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFD 317
           E  +TLA Y I+    L ++      S  QIFVKT  GKTITLDV+  +T++ VK K+ D
Sbjct: 122 EDGRTLADYNIQKESTLHLVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVKQKIQD 181

Query: 318 KLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 182 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 220



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 90/241 (37%), Positives = 134/241 (55%), Gaps = 13/241 (5%)

Query: 84  TVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPK--EILS 141
           T++ +K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +    + 
Sbjct: 15  TIETVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGSGMQ 73

Query: 142 IFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMK 201
           IFVK  TG+ + L+V+ S  I  VK  +    G+      +I+ GK+LED +TLA Y+++
Sbjct: 74  IFVKTLTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 133

Query: 202 DECLLEMF-----PSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
            E  L +       S +QIFV+T   + + L+VE    +  VK+ + +   +    Q L 
Sbjct: 134 KESTLHLVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLI 193

Query: 257 YAGTKLEACKTLASYGIKNNYVLDVL-----PSPFQIFVKTWGGKTITLDVQPYNTVQDV 311
           +AG +LE  +TLA Y I+    L ++      S  QIFVKT  GKTITLDV+  +T++ V
Sbjct: 194 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETV 253

Query: 312 K 312
           K
Sbjct: 254 K 254



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 94/250 (37%), Positives = 139/250 (55%), Gaps = 12/250 (4%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL--HQ 57
           + V+ S+ I+ +K  I  KEGI  D   L FAG +LE GR L DY I+  STLH +   +
Sbjct: 8   LDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 67

Query: 58  NLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTA 117
             S M++FVK  T +T T ++     T++ +K  IQ KEGI  DQ  L++ GK L ED  
Sbjct: 68  GGSGMQIFVKTLTGKTIT-LDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQL-EDGR 125

Query: 118 TMTSMNIKSESIIHLVFCPK--EILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGV 175
           T+   NI+ ES +HLV   +    + IFVK  TG+ + L+V+ S  I  VK  +    G+
Sbjct: 126 TLADYNIQKESTLHLVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVKQKIQDKEGI 185

Query: 176 SAADHIMIYEGKKLEDSKTLAFYDMKDECLLEMF-----PSSIQIFVRTPIEEIVRLEVE 230
                 +I+ GK+LED +TLA Y+++ E  L +       S +QIFV+T   + + L+VE
Sbjct: 186 PPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGSGMQIFVKTLTGKTITLDVE 245

Query: 231 VLIVVRDVKE 240
               +  VK+
Sbjct: 246 SSDTIETVKQ 255



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 75/203 (36%), Positives = 106/203 (52%), Gaps = 13/203 (6%)

Query: 225 VRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVL-- 282
           + L+VE    +  VK+ + +   +    Q L +AG +LE  +TLA Y I+    L ++  
Sbjct: 6   ITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 65

Query: 283 ---PSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENH 339
               S  QIFVKT  GKTITLDV+  +T++ VK K+ DK   P   Q ++FAGK+L +  
Sbjct: 66  LRGGSGMQIFVKTLTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGR 125

Query: 340 VLARYNIQKHSTLHMV--LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA--- 394
            LA YNIQK STLH+V  L   S +          +I+L +  S+  E  K K Q     
Sbjct: 126 TLADYNIQKESTLHLVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVKQKIQDKEGI 185

Query: 395 ---VKELLVDQVALQDDRTLADY 414
               + L+     L+D RTLADY
Sbjct: 186 PPDQQRLIFAGKQLEDGRTLADY 208


>gi|361584485|gb|AEW12065.1| polyubiquitin, partial [Drosophila melanogaster]
 gi|361584487|gb|AEW12066.1| polyubiquitin, partial [Drosophila melanogaster]
 gi|361584489|gb|AEW12067.1| polyubiquitin, partial [Drosophila melanogaster]
 gi|361584501|gb|AEW12073.1| polyubiquitin, partial [Drosophila melanogaster]
          Length = 231

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 130/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +            +I+ GK LE+ +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDYN 60

Query: 200 MKDEC---LLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E    L+      +QIFV+T   + + LEVE    + +VK  + +  +    +Q L 
Sbjct: 61  IQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNN---YVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG  LE  +TL+ Y I+     Y++  L    QIFVKT  GKTITL+V+P +++++VK 
Sbjct: 121 FAGKHLENGRTLSDYNIQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           ++ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 RIHDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 77/209 (36%), Positives = 122/209 (58%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KE    +   L F G  LE GR L DY I+  ST++ + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDYNIQKESTIYLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KE    +   L++ GK L E+  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEENPPEHQRLIFAGKHL-ENGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES I+LV   +  + IFVK  TG+ + LEV+ S +I +VKA +    G+    
Sbjct: 133 SDYNIQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKARIHDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 116/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +  +    +Q L + G  LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDYN 60

Query: 273 IKNN---YVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+     Y++  L    QIFVKT  GKTITL+V+P +T+++VK K+ DK + P   Q ++
Sbjct: 61  IQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK L     L+ YNIQK ST+++VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKHLENGRTLSDYNIQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           +           + L+     L+D RTL+DY +     + LV 
Sbjct: 181 RIHDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/135 (40%), Positives = 81/135 (60%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KE    +   L FAG  LE GR L DY I+  ST++ + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEENPPEHQRLIFAGKHLENGRTLSDYNIQKESTIYLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  +++N+K  I  KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDSIENVKARIHDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 209 SDYNIQKESTLHLVL 223


>gi|309252551|gb|ADO60140.1| ubiquitin [Beauveria bassiana]
          Length = 215

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/202 (41%), Positives = 123/202 (60%), Gaps = 3/202 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMK 201
             +I+ GK+LED +TL+ Y+++
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQ 214



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 80/215 (37%), Positives = 123/215 (57%), Gaps = 6/215 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK+ +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQK 348
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 215



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 79/216 (36%), Positives = 124/216 (57%), Gaps = 5/216 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIK 274
           K  + +   +    Q L +AG +LE  +TL+ Y I+
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 214



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/213 (35%), Positives = 113/213 (53%), Gaps = 9/213 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGM 416
           K Q         + L+     L+D RTL+DY +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 213



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 78/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  +  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|118399883|ref|XP_001032265.1| Ubiquitin family protein [Tetrahymena thermophila]
 gi|89286605|gb|EAR84602.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
          Length = 1252

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/210 (41%), Positives = 128/210 (60%), Gaps = 5/210 (2%)

Query: 1    MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
            + V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 1038 LDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 1097

Query: 60   SEMKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
              M++FVK  T +T T+ VEA    T++N+K  IQ KEGI  DQ  L++ GK L ED  T
Sbjct: 1098 GGMQIFVKTLTGKTITLDVEASD--TIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 1154

Query: 119  MTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAA 178
            ++  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+   
Sbjct: 1155 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPD 1214

Query: 179  DHIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
               +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 1215 QQRLIFAGKQLEDGRTLSDYNIQKESTLHL 1244



 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 82/215 (38%), Positives = 126/215 (58%), Gaps = 6/215 (2%)

Query: 148  TGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLE 207
            TG+ + L+V+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+++ E  L 
Sbjct: 1032 TGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 1091

Query: 208  M---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEA 264
            +       +QIFV+T   + + L+VE    + +VK  + +   +    Q L +AG +LE 
Sbjct: 1092 LVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 1151

Query: 265  CKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQT 321
             +TL+ Y I+    L +   L    QIFVKT  GKTITLDV+  +T+++VK K+ DK   
Sbjct: 1152 GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGI 1211

Query: 322  PLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
            P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 1212 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 1246



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 70/194 (36%), Positives = 112/194 (57%), Gaps = 4/194 (2%)

Query: 84   TVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIF 143
            T++N+K  IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV   +  + IF
Sbjct: 1045 TIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIF 1103

Query: 144  VKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDE 203
            VK  TG+ + L+V+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+++ E
Sbjct: 1104 VKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 1163

Query: 204  CLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGT 260
              L +       +QIFV+T   + + L+VE    + +VK  + +   +    Q L +AG 
Sbjct: 1164 STLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 1223

Query: 261  KLEACKTLASYGIK 274
            +LE  +TL+ Y I+
Sbjct: 1224 QLEDGRTLSDYNIQ 1237



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/210 (34%), Positives = 109/210 (51%), Gaps = 9/210 (4%)

Query: 225  VRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV--- 281
            + L+VE    + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   
Sbjct: 1036 ITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 1095

Query: 282  LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVL 341
            L    QIFVKT  GKTITLDV+  +T+++VK K+ DK   P   Q ++FAGK+L +   L
Sbjct: 1096 LRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 1155

Query: 342  ARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------V 395
            + YNIQK STLH+VL     +          +I+L +  S+  E  K K Q         
Sbjct: 1156 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQ 1215

Query: 396  KELLVDQVALQDDRTLADYGMDLSEKVVLV 425
            + L+     L+D RTL+DY +     + LV
Sbjct: 1216 QRLIFAGKQLEDGRTLSDYNIQKESTLHLV 1245



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/140 (36%), Positives = 74/140 (52%), Gaps = 6/140 (4%)

Query: 292  TWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHST 351
            T  GKTITLDV+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK ST
Sbjct: 1030 TLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 1089

Query: 352  LHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVAL 405
            LH+VL     +          +I+L +  S+  E  K K Q         + L+     L
Sbjct: 1090 LHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 1149

Query: 406  QDDRTLADYGMDLSEKVVLV 425
            +D RTL+DY +     + LV
Sbjct: 1150 EDGRTLSDYNIQKESTLHLV 1169



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1    MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
            + V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 1190 LDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 1245


>gi|361584493|gb|AEW12069.1| polyubiquitin, partial [Drosophila melanogaster]
 gi|361584497|gb|AEW12071.1| polyubiquitin, partial [Drosophila melanogaster]
          Length = 231

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 130/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I++VKA +            +I+ GK LE+ +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIKNVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDYN 60

Query: 200 MKDEC---LLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E    L+      +QIFV+T   + + LEVE    + +VK  + +  +    +Q L 
Sbjct: 61  IQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNN---YVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           + G  LE  +TL+ Y I+     Y++  L    QIFVKT  GKTITL+V+P +++++VK 
Sbjct: 121 FGGKHLENGRTLSDYNIQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           ++ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 RIHDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 122/209 (58%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ IKN+KA I  KE    +   L F G  LE GR L DY I+  ST++ + +  
Sbjct: 15  LEVEPSDTIKNVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDYNIQKESTIYLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KE    +   L++ GK L E+  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHL-ENGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES I+LV   +  + IFVK  TG+ + LEV+ S +I +VKA +    G+    
Sbjct: 133 SDYNIQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKARIHDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 73/223 (32%), Positives = 116/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    +++VK  + +  +    +Q L + G  LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIKNVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDYN 60

Query: 273 IKNN---YVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+     Y++  L    QIFVKT  GKTITL+V+P +T+++VK K+ DK + P   Q ++
Sbjct: 61  IQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           F GK L     L+ YNIQK ST+++VL     +          +I+L +  S+  E  K 
Sbjct: 121 FGGKHLENGRTLSDYNIQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           +           + L+     L+D RTL+DY +     + LV 
Sbjct: 181 RIHDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/135 (40%), Positives = 80/135 (59%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KE    +   L F G  LE GR L DY I+  ST++ + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDYNIQKESTIYLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  +++N+K  I  KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDSIENVKARIHDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 209 SDYNIQKESTLHLVL 223


>gi|361584491|gb|AEW12068.1| polyubiquitin, partial [Drosophila melanogaster]
          Length = 231

 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 130/223 (58%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I++VKA +            +I+ GK LE+ +TL+ Y+
Sbjct: 1   MHIFVKTLTGKTITLEVEPSDTIKNVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDYN 60

Query: 200 MKDEC---LLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E    L+      +QIFV+T   + + LEVE    + +VK  + +  +    +Q L 
Sbjct: 61  IQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNN---YVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           + G  LE  +TL+ Y I+     Y++  L    QIFVKT  GKTITL+V+P +++++VK 
Sbjct: 121 FGGKHLENGRTLSDYNIQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           ++ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 RIHDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 122/209 (58%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ IKN+KA I  KE    +   L F G  LE GR L DY I+  ST++ + +  
Sbjct: 15  LEVEPSDTIKNVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDYNIQKESTIYLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KE    +   L++ GK L E+  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHL-ENGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES I+LV   +  + IFVK  TG+ + LEV+ S +I +VKA +    G+    
Sbjct: 133 SDYNIQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKARIHDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 115/223 (51%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           + IFV+T   + + LEVE    +++VK  + +  +    +Q L + G  LE  +TL+ Y 
Sbjct: 1   MHIFVKTLTGKTITLEVEPSDTIKNVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDYN 60

Query: 273 IKNN---YVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+     Y++  L    QIFVKT  GKTITL+V+P +T+++VK K+ DK + P   Q ++
Sbjct: 61  IQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           F GK L     L+ YNIQK ST+++VL     +          +I+L +  S+  E  K 
Sbjct: 121 FGGKHLENGRTLSDYNIQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           +           + L+     L+D RTL+DY +     + LV 
Sbjct: 181 RIHDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/135 (40%), Positives = 80/135 (59%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KE    +   L F G  LE GR L DY I+  ST++ + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDYNIQKESTIYLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  +++N+K  I  KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDSIENVKARIHDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 209 SDYNIQKESTLHLVL 223


>gi|361584495|gb|AEW12070.1| polyubiquitin, partial [Drosophila melanogaster]
          Length = 231

 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 129/223 (57%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +            +I+ GK LE+ +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDYN 60

Query: 200 MKDEC---LLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E    L+      +QIFV+T   + + LEVE    + +VK  + +  +    +Q L 
Sbjct: 61  IQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNN---YVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           + G  LE  +TL+ Y I+     Y++  L    QIFVKT  GKTITL+V+P +++++VK 
Sbjct: 121 FGGKHLENGRTLSDYNIQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           ++ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 RIHDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 77/209 (36%), Positives = 122/209 (58%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KE    +   L F G  LE GR L DY I+  ST++ + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDYNIQKESTIYLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KE    +   L++ GK L E+  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHL-ENGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES I+LV   +  + IFVK  TG+ + LEV+ S +I +VKA +    G+    
Sbjct: 133 SDYNIQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKARIHDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/223 (32%), Positives = 115/223 (51%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +  +    +Q L + G  LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDYN 60

Query: 273 IKNN---YVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+     Y++  L    QIFVKT  GKTITL+V+P +T+++VK K+ DK + P   Q ++
Sbjct: 61  IQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           F GK L     L+ YNIQK ST+++VL     +          +I+L +  S+  E  K 
Sbjct: 121 FGGKHLENGRTLSDYNIQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           +           + L+     L+D RTL+DY +     + LV 
Sbjct: 181 RIHDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/135 (40%), Positives = 80/135 (59%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KE    +   L F G  LE GR L DY I+  ST++ + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDYNIQKESTIYLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  +++N+K  I  KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDSIENVKARIHDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 209 SDYNIQKESTLHLVL 223


>gi|310693627|gb|ADP05114.1| polyubiquitin 10 [Aponogeton madagascariensis]
          Length = 221

 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 88/217 (40%), Positives = 125/217 (57%), Gaps = 6/217 (2%)

Query: 146 AATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECL 205
           A TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+++ E  
Sbjct: 1   ALTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 60

Query: 206 LEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKL 262
           L +       +QIFV+T   E   LEVE    + +VK  + +   +    Q L +AG +L
Sbjct: 61  LHLVLRLRGGMQIFVKTLTGETTTLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL 120

Query: 263 EACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKL 319
           E  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK 
Sbjct: 121 EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 180

Query: 320 QTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
             P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 181 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 217



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/210 (41%), Positives = 123/210 (58%), Gaps = 5/210 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 9   LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 68

Query: 60  SEMKLFVK-IPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
             M++FVK +    T   VE+    T+ N+K  IQ KEGI  DQ  L++ GK L ED  T
Sbjct: 69  GGMQIFVKTLTGETTTLEVES--SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 125

Query: 119 MTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAA 178
           +   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+   
Sbjct: 126 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD 185

Query: 179 DHIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
              +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 186 QQRLIFAGKQLEDGRTLADYNIQKESTLHL 215



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/213 (37%), Positives = 116/213 (54%), Gaps = 5/213 (2%)

Query: 70  TNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESI 129
           T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES 
Sbjct: 3   TGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKEST 60

Query: 130 IHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKL 189
           +HLV   +  + IFVK  TGE   LEV+ S  I +VKA +    G+      +I+ GK+L
Sbjct: 61  LHLVLRLRGGMQIFVKTLTGETTTLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL 120

Query: 190 EDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANII 246
           ED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +  
Sbjct: 121 EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 180

Query: 247 DLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
            +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 181 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 213



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 73/211 (34%), Positives = 107/211 (50%), Gaps = 9/211 (4%)

Query: 225 VRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV--- 281
           + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   
Sbjct: 7   ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 66

Query: 282 LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVL 341
           L    QIFVKT  G+T TL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L
Sbjct: 67  LRGGMQIFVKTLTGETTTLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 126

Query: 342 ARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAV 395
           A YNIQK STLH+VL     +          +I+L +  S+  +  K K Q         
Sbjct: 127 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 186

Query: 396 KELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           + L+     L+D RTLADY +     + LV 
Sbjct: 187 QRLIFAGKQLEDGRTLADYNIQKESTLHLVL 217



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/144 (36%), Positives = 77/144 (53%), Gaps = 18/144 (12%)

Query: 295 GKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHM 354
           GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+
Sbjct: 4   GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 63

Query: 355 VLAPSSRIIELPLIFIDPS--------ISLSISISEVKEMAKVKFQAAV----KELLVDQ 402
           VL    R+     IF+           +  S +I  VK  AK++ +  +    + L+   
Sbjct: 64  VL----RLRGGMQIFVKTLTGETTTLEVESSDTIDNVK--AKIQDKEGIPPDQQRLIFAG 117

Query: 403 VALQDDRTLADYGMDLSEKVVLVF 426
             L+D RTLADY +     + LV 
Sbjct: 118 KQLEDGRTLADYNIQKESTLHLVL 141



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 161 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 216


>gi|60417384|emb|CAI59819.1| ubiquitin [Nyctotherus ovalis]
          Length = 208

 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 82/205 (40%), Positives = 121/205 (59%), Gaps = 3/205 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ ++ I+ +KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 5   LDVEPNDTIEQVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 64

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ +  P  T++ +K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 65  GGMQIFVKTLTGKTITL-DVEPNDTIEQVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 122

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + L+V+ +  I  VKA +    G+    
Sbjct: 123 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPNDTIEQVKAKIQDKEGIPPDQ 182

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDEC 204
             +I+ GK+LED +TLA Y+++ E 
Sbjct: 183 QRLIFAGKQLEDGRTLADYNIQKES 207



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/206 (38%), Positives = 116/206 (56%), Gaps = 6/206 (2%)

Query: 152 VNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM--- 208
           + L+V+ +  I  VKA +    G+      +I+ GK+LED +TLA Y+++ E  L +   
Sbjct: 3   ITLDVEPNDTIEQVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 62

Query: 209 FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTL 268
               +QIFV+T   + + L+VE    +  VK  + +   +    Q L +AG +LE  +TL
Sbjct: 63  LRGGMQIFVKTLTGKTITLDVEPNDTIEQVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 122

Query: 269 ASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHL 325
           A Y I+    L +   L    QIFVKT  GKTITLDV+P +T++ VK K+ DK   P   
Sbjct: 123 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPNDTIEQVKAKIQDKEGIPPDQ 182

Query: 326 QSIVFAGKRLFENHVLARYNIQKHST 351
           Q ++FAGK+L +   LA YNIQK ST
Sbjct: 183 QRLIFAGKQLEDGRTLADYNIQKEST 208



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/197 (36%), Positives = 109/197 (55%), Gaps = 4/197 (2%)

Query: 81  PYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEIL 140
           P  T++ +K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +  +
Sbjct: 9   PNDTIEQVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGM 67

Query: 141 SIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDM 200
            IFVK  TG+ + L+V+ +  I  VKA +    G+      +I+ GK+LED +TLA Y++
Sbjct: 68  QIFVKTLTGKTITLDVEPNDTIEQVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 127

Query: 201 KDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFY 257
           + E  L +       +QIFV+T   + + L+VE    +  VK  + +   +    Q L +
Sbjct: 128 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPNDTIEQVKAKIQDKEGIPPDQQRLIF 187

Query: 258 AGTKLEACKTLASYGIK 274
           AG +LE  +TLA Y I+
Sbjct: 188 AGKQLEDGRTLADYNIQ 204



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/201 (36%), Positives = 105/201 (52%), Gaps = 9/201 (4%)

Query: 225 VRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV--- 281
           + L+VE    +  VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   
Sbjct: 3   ITLDVEPNDTIEQVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 62

Query: 282 LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVL 341
           L    QIFVKT  GKTITLDV+P +T++ VK K+ DK   P   Q ++FAGK+L +   L
Sbjct: 63  LRGGMQIFVKTLTGKTITLDVEPNDTIEQVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 122

Query: 342 ARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAV 395
           A YNIQK STLH+VL     +          +I+L +  ++  E  K K Q         
Sbjct: 123 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPNDTIEQVKAKIQDKEGIPPDQ 182

Query: 396 KELLVDQVALQDDRTLADYGM 416
           + L+     L+D RTLADY +
Sbjct: 183 QRLIFAGKQLEDGRTLADYNI 203



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 51/137 (37%), Positives = 72/137 (52%), Gaps = 6/137 (4%)

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITLDV+P +T++ VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 1   KTITLDVEPNDTIEQVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 60

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  ++  E  K K Q         + L+     L+D R
Sbjct: 61  LRLRGGMQIFVKTLTGKTITLDVEPNDTIEQVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 120

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 121 TLADYNIQKESTLHLVL 137


>gi|29836445|gb|AAM78180.1| putative polyubiquitin [Gossypium herbaceum]
 gi|29836447|gb|AAM78181.1| putative polyubiquitin [Gossypium raimondii]
 gi|29836449|gb|AAM78182.1| putative polyubiquitin [Gossypium barbadense]
 gi|29836451|gb|AAM78183.1| putative polyubiquitin [Gossypium barbadense]
 gi|29836453|gb|AAM78184.1| putative polyubiquitin [Gossypioides kirkii]
          Length = 204

 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 84/198 (42%), Positives = 116/198 (58%), Gaps = 3/198 (1%)

Query: 12  LKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPT 70
           +KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +    M++FVK  T
Sbjct: 1   VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLT 60

Query: 71  NQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESII 130
            +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +
Sbjct: 61  GKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTL 118

Query: 131 HLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLE 190
           HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LE
Sbjct: 119 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 178

Query: 191 DSKTLAFYDMKDECLLEM 208
           D +TLA Y+++ E  L +
Sbjct: 179 DGRTLADYNIQKESTLHL 196



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/198 (39%), Positives = 114/198 (57%), Gaps = 6/198 (3%)

Query: 165 VKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPI 221
           VKA +    G+      +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T  
Sbjct: 1   VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLT 60

Query: 222 EEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV 281
            + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +
Sbjct: 61  GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 120

Query: 282 ---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFEN 338
              L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L + 
Sbjct: 121 VLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDG 180

Query: 339 HVLARYNIQKHSTLHMVL 356
             LA YNIQK STLH+VL
Sbjct: 181 RTLADYNIQKESTLHLVL 198



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 73/195 (37%), Positives = 108/195 (55%), Gaps = 4/195 (2%)

Query: 88  IKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAA 147
           +K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +  + IFVK  
Sbjct: 1   VKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 59

Query: 148 TGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLE 207
           TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+++ E  L 
Sbjct: 60  TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 119

Query: 208 M---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEA 264
           +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE 
Sbjct: 120 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 179

Query: 265 CKTLASYGIKNNYVL 279
            +TLA Y I+    L
Sbjct: 180 GRTLADYNIQKESTL 194



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 96/184 (52%), Gaps = 9/184 (4%)

Query: 252 NQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTV 308
            Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+
Sbjct: 15  QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 74

Query: 309 QDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLI 368
            +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +      
Sbjct: 75  DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKT 134

Query: 369 FIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKV 422
               +I+L +  S+  +  K K Q         + L+     L+D RTLADY +     +
Sbjct: 135 LTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 194

Query: 423 VLVF 426
            LV 
Sbjct: 195 HLVL 198



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 81/135 (60%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 66  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 125

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 126 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 183

Query: 120 TSMNIKSESIIHLVF 134
              NI+ ES +HLV 
Sbjct: 184 ADYNIQKESTLHLVL 198


>gi|361584499|gb|AEW12072.1| polyubiquitin, partial [Drosophila melanogaster]
          Length = 231

 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 129/223 (57%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +            +I+ GK LE+ +TL+ Y+
Sbjct: 1   MHIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDYN 60

Query: 200 MKDEC---LLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E    L+      +QIFV+T   + + LEVE    + +VK  + +  +    +Q L 
Sbjct: 61  IQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNN---YVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           + G  LE  +TL+ Y I+     Y++  L    QIFVKT  GKTITL+V+P +++++VK 
Sbjct: 121 FGGKHLENGRTLSDYNIQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSLENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           ++ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 RIHDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/209 (36%), Positives = 122/209 (58%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KE    +   L F G  LE GR L DY I+  ST++ + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDYNIQKESTIYLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KE    +   L++ GK L E+  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHL-ENGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES I+LV   +  + IFVK  TG+ + LEV+ S ++ +VKA +    G+    
Sbjct: 133 SDYNIQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSLENVKARIHDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 114/223 (51%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           + IFV+T   + + LEVE    + +VK  + +  +    +Q L + G  LE  +TL+ Y 
Sbjct: 1   MHIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDYN 60

Query: 273 IKNN---YVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+     Y++  L    QIFVKT  GKTITL+V+P +T+++VK K+ DK + P   Q ++
Sbjct: 61  IQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           F GK L     L+ YNIQK ST+++VL     +          +I+L +  S+  E  K 
Sbjct: 121 FGGKHLENGRTLSDYNIQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSLENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           +           + L+     L+D RTL+DY +     + LV 
Sbjct: 181 RIHDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 54/135 (40%), Positives = 80/135 (59%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KE    +   L F G  LE GR L DY I+  ST++ + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDYNIQKESTIYLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  +++N+K  I  KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDSLENVKARIHDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 209 SDYNIQKESTLHLVL 223


>gi|195164961|ref|XP_002023314.1| GL20619 [Drosophila persimilis]
 gi|194105419|gb|EDW27462.1| GL20619 [Drosophila persimilis]
          Length = 231

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 127/224 (56%), Gaps = 7/224 (3%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRD-VKEIVANIIDLSLGNQDL 255
           ++ E  L +       +QIFV+T   +        L   R+  K  + +   +    Q L
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLDWQDHHPRGRALGHHRESFKAKIQDKEGIPPDQQRL 120

Query: 256 FYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVK 312
            +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK
Sbjct: 121 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVK 180

Query: 313 VKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
            K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 224



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 83/209 (39%), Positives = 120/209 (57%), Gaps = 2/209 (0%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK    Q          H  ++ K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLDWQDHHPRGRALGHHRESFKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 133

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 134 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 193

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 194 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 222



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/126 (46%), Positives = 77/126 (61%), Gaps = 3/126 (2%)

Query: 10  KNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKI 68
           ++ KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +    M++FVK 
Sbjct: 101 ESFKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKT 160

Query: 69  PTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSES 128
            T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES
Sbjct: 161 LTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKES 218

Query: 129 IIHLVF 134
            +HLV 
Sbjct: 219 TLHLVL 224



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 106/230 (46%), Gaps = 22/230 (9%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKT--WGGKTITLDVQPYNTV-----QDVKVKLFDKLQTP 322
           I+    L +   L    QIFVKT  W       D  P         +  K K+ DK   P
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLDW------QDHHPRGRALGHHRESFKAKIQDKEGIP 114

Query: 323 LHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISE 382
              Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+
Sbjct: 115 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 174

Query: 383 VKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
             E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 175 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 224


>gi|83305995|emb|CAE00783.1| polyubiquitin homolog [Sordaria macrospora]
          Length = 208

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/207 (40%), Positives = 121/207 (58%), Gaps = 3/207 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K  I  KE I  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 3   LEVESSDTIDNVKQKIQDKEDIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 62

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 63  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 120

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 121 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQ 180

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLL 206
             +I+ GK+LED +TL+ Y+++ E  L
Sbjct: 181 QRLIFAGKQLEDGRTLSDYNIQKESTL 207



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 77/208 (37%), Positives = 118/208 (56%), Gaps = 6/208 (2%)

Query: 152 VNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM--- 208
           + LEV+ S  I +VK  +     +      +I+ GK+LED +TL+ Y+++ E  L +   
Sbjct: 1   ITLEVESSDTIDNVKQKIQDKEDIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 60

Query: 209 FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTL 268
               +QIFV+T   + + LEVE    + +VK+ + +   +    Q L +AG +LE  +TL
Sbjct: 61  LRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTL 120

Query: 269 ASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHL 325
           + Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   
Sbjct: 121 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQ 180

Query: 326 QSIVFAGKRLFENHVLARYNIQKHSTLH 353
           Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 181 QRLIFAGKQLEDGRTLSDYNIQKESTLH 208



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 113/207 (54%), Gaps = 4/207 (1%)

Query: 76  VVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFC 135
            +E     T+ N+K  IQ KE I  DQ  L++ GK L ED  T++  NI+ ES +HLV  
Sbjct: 2   TLEVESSDTIDNVKQKIQDKEDIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLR 60

Query: 136 PKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTL 195
            +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+LED +TL
Sbjct: 61  LRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTL 120

Query: 196 AFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGN 252
           + Y+++ E  L +       +QIFV+T   + + LEVE    + +VK+ + +   +    
Sbjct: 121 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQ 180

Query: 253 QDLFYAGTKLEACKTLASYGIKNNYVL 279
           Q L +AG +LE  +TL+ Y I+    L
Sbjct: 181 QRLIFAGKQLEDGRTLSDYNIQKESTL 207



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 71/201 (35%), Positives = 107/201 (53%), Gaps = 9/201 (4%)

Query: 225 VRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV--- 281
           + LEVE    + +VK+ + +  D+    Q L +AG +LE  +TL+ Y I+    L +   
Sbjct: 1   ITLEVESSDTIDNVKQKIQDKEDIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 60

Query: 282 LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVL 341
           L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L
Sbjct: 61  LRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTL 120

Query: 342 ARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAV 395
           + YNIQK STLH+VL     +          +I+L +  S+  +  K K Q         
Sbjct: 121 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQ 180

Query: 396 KELLVDQVALQDDRTLADYGM 416
           + L+     L+D RTL+DY +
Sbjct: 181 QRLIFAGKQLEDGRTLSDYNI 201



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/132 (43%), Positives = 79/132 (59%), Gaps = 3/132 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 79  LEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 138

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 139 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 196

Query: 120 TSMNIKSESIIH 131
           +  NI+ ES +H
Sbjct: 197 SDYNIQKESTLH 208



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 69/135 (51%), Gaps = 6/135 (4%)

Query: 298 ITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLA 357
           ITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL 
Sbjct: 1   ITLEVESSDTIDNVKQKIQDKEDIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 60

Query: 358 PSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTL 411
               +          +I+L +  S+  +  K K Q         + L+     L+D RTL
Sbjct: 61  LRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTL 120

Query: 412 ADYGMDLSEKVVLVF 426
           +DY +     + LV 
Sbjct: 121 SDYNIQKESTLHLVL 135


>gi|149391359|gb|ABR25697.1| polyubiquitin containing 7 ubiquitin monomers [Oryza sativa Indica
           Group]
          Length = 201

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 82/194 (42%), Positives = 113/194 (58%), Gaps = 3/194 (1%)

Query: 16  IHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTA 74
           I  KEGI  D   L FAG +LE GR L DY I+  STLH + +    M++FVK  T +T 
Sbjct: 2   IQDKEGIPPDQQRLIFAGKQLEDGRTLXDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 61

Query: 75  TVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVF 134
           T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV 
Sbjct: 62  TL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVL 119

Query: 135 CPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKT 194
             +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +T
Sbjct: 120 RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 179

Query: 195 LAFYDMKDECLLEM 208
           LA Y+++ E  L +
Sbjct: 180 LADYNIQKESTLHL 193



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 75/189 (39%), Positives = 109/189 (57%), Gaps = 6/189 (3%)

Query: 174 GVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVE 230
           G+      +I+ GK+LED +TL  Y+++ E  L +       +QIFV+T   + + LEVE
Sbjct: 7   GIPPDQQRLIFAGKQLEDGRTLXDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 66

Query: 231 VLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQ 287
               + +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    Q
Sbjct: 67  SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQ 126

Query: 288 IFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQ 347
           IFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQ
Sbjct: 127 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 186

Query: 348 KHSTLHMVL 356
           K STLH+VL
Sbjct: 187 KESTLHLVL 195



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 95/184 (51%), Gaps = 9/184 (4%)

Query: 252 NQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTV 308
            Q L +AG +LE  +TL  Y I+    L +   L    QIFVKT  GKTITL+V+  +T+
Sbjct: 12  QQRLIFAGKQLEDGRTLXDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 71

Query: 309 QDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLI 368
            +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +      
Sbjct: 72  DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKT 131

Query: 369 FIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKV 422
               +I+L +  S+  +  K K Q         + L+     L+D RTLADY +     +
Sbjct: 132 LTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 191

Query: 423 VLVF 426
            LV 
Sbjct: 192 HLVL 195



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 81/135 (60%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 63  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 122

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 123 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 180

Query: 120 TSMNIKSESIIHLVF 134
              NI+ ES +HLV 
Sbjct: 181 ADYNIQKESTLHLVL 195



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 56/119 (47%), Gaps = 6/119 (5%)

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L  YNIQK STLH+VL     +          +
Sbjct: 1   KIQDKEGIPPDQQRLIFAGKQLEDGRTLXDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 60

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 61  ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 119


>gi|378747684|gb|AFC36452.1| ubiquitin, partial [Anoectochilus roxburghii]
          Length = 214

 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/212 (40%), Positives = 122/212 (57%), Gaps = 6/212 (2%)

Query: 32  AGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKT 90
           AG +LE GR L DY I+  STLH + +    M++FVK  T +T T +E     T+ N+K 
Sbjct: 1   AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT-LEVESSDTIDNVKA 59

Query: 91  MIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGE 150
            IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +  + IFVK  TG+
Sbjct: 60  KIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 118

Query: 151 IVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM-- 208
            + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+++ E  L +  
Sbjct: 119 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 178

Query: 209 -FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVK 239
                +QIFV+T   + + LEVE    + +VK
Sbjct: 179 RLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 210



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/213 (38%), Positives = 120/213 (56%), Gaps = 7/213 (3%)

Query: 109 GKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAI 168
           GK L ED  T+   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA 
Sbjct: 2   GKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK 60

Query: 169 VGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIV 225
           +    G+      +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + +
Sbjct: 61  IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 120

Query: 226 RLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---L 282
            LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L
Sbjct: 121 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 180

Query: 283 PSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKL 315
               QIFVKT  GKTITL+V+  +T+ +VK K+
Sbjct: 181 RGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 213



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/213 (37%), Positives = 117/213 (54%), Gaps = 6/213 (2%)

Query: 186 GKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIV 242
           GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  +
Sbjct: 2   GKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 61

Query: 243 ANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTIT 299
            +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTIT
Sbjct: 62  QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 121

Query: 300 LDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPS 359
           L+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL   
Sbjct: 122 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 181

Query: 360 SRIIELPLIFIDPSISLSISISEVKEMAKVKFQ 392
             +          +I+L +  S+  +  K K +
Sbjct: 182 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIR 214



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 75/168 (44%), Positives = 101/168 (60%), Gaps = 3/168 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 46  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 105

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 106 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 163

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKA 167
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA
Sbjct: 164 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 211



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/178 (37%), Positives = 93/178 (52%), Gaps = 9/178 (5%)

Query: 258 AGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVK 314
           AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K
Sbjct: 1   AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK 60

Query: 315 LFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSI 374
           + DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +I
Sbjct: 61  IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 120

Query: 375 SLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           +L +  S+  +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 121 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 178


>gi|197129049|gb|ACH45547.1| putative ubiquitin C variant 1 [Taeniopygia guttata]
          Length = 209

 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 81/190 (42%), Positives = 115/190 (60%), Gaps = 3/190 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKL 189
             +I+ GK+L
Sbjct: 193 QRLIFAGKQL 202



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 76/202 (37%), Positives = 117/202 (57%), Gaps = 6/202 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRL 335
           K+ DK   P   Q ++FAGK+L
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQL 202



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 76/207 (36%), Positives = 117/207 (56%), Gaps = 5/207 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEAC 265
           K  + +   +    Q L +AG +L   
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLGGW 205



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 69/183 (37%), Positives = 102/183 (55%), Gaps = 3/183 (1%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 390 KFQ 392
           K Q
Sbjct: 181 KIQ 183



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 80/147 (54%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|347966900|ref|XP_321092.3| AGAP001969-PA [Anopheles gambiae str. PEST]
 gi|333469849|gb|EAA01267.4| AGAP001969-PA [Anopheles gambiae str. PEST]
          Length = 309

 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 92/301 (30%), Positives = 154/301 (51%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK+ T +T   V+  P  TV+++K  I  +E I  +Q  +++ GK L ED   +  
Sbjct: 1   MQIFVKMLTGKT-IAVDTEPEATVESVKKQIDEREEIPPNQQRMIFAGKQL-EDGRQLQE 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            +I   S IHLV   K  + IFVK  TG+ + ++ +    +  VK  +     +      
Sbjct: 59  YSIIKGSTIHLVLRLKGGMQIFVKMLTGKTIAVDTEPEATVESVKKQIDEREEIPPNQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           MI+ GK+LED + L  Y +     + +       +QIFV+    + + ++ E    V  V
Sbjct: 119 MIFAGKQLEDGRQLQEYSIIKGSTVHLVLRLKGGMQIFVKMLTGKTIAVDTEPEATVESV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K+ +    ++    Q + +AG +LE  + L  Y I     + +   L    QIFVK   G
Sbjct: 179 KKQIDEREEIPPNQQRMIFAGKQLEDGRQLQEYSIIKGSTVHLVLRLKGGMQIFVKMLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTI +D +P  TV+ VK ++ ++ + P + Q ++FAGK+L +   L  Y+I K ST+H+V
Sbjct: 239 KTIAVDTEPEATVESVKKQIDEREEIPPNQQRMIFAGKQLEDGRQLQEYSIIKGSTVHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 78/275 (28%), Positives = 136/275 (49%), Gaps = 9/275 (3%)

Query: 6   SEP---IKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSE 61
           +EP   ++++K  I  +E I  +   + FAG +LE GR L +Y I   ST+H + +    
Sbjct: 17  TEPEATVESVKKQIDEREEIPPNQQRMIFAGKQLEDGRQLQEYSIIKGSTIHLVLRLKGG 76

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK+ T +T   V+  P  TV+++K  I  +E I  +Q  +++ GK L ED   +  
Sbjct: 77  MQIFVKMLTGKT-IAVDTEPEATVESVKKQIDEREEIPPNQQRMIFAGKQL-EDGRQLQE 134

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            +I   S +HLV   K  + IFVK  TG+ + ++ +    +  VK  +     +      
Sbjct: 135 YSIIKGSTVHLVLRLKGGMQIFVKMLTGKTIAVDTEPEATVESVKKQIDEREEIPPNQQR 194

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           MI+ GK+LED + L  Y +     + +       +QIFV+    + + ++ E    V  V
Sbjct: 195 MIFAGKQLEDGRQLQEYSIIKGSTVHLVLRLKGGMQIFVKMLTGKTIAVDTEPEATVESV 254

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGI 273
           K+ +    ++    Q + +AG +LE  + L  Y I
Sbjct: 255 KKQIDEREEIPPNQQRMIFAGKQLEDGRQLQEYSI 289


>gi|270300599|gb|ACZ69386.1| polyubiquitin UBQ14 [Cucumis sativus]
          Length = 197

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/191 (42%), Positives = 112/191 (58%), Gaps = 3/191 (1%)

Query: 19  KEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVV 77
           KEGI  D   L FAG +LE GR L DY I+  STLH + +    M++FVK  T +T T +
Sbjct: 1   KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT-L 59

Query: 78  EAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPK 137
           E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +
Sbjct: 60  EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLR 118

Query: 138 EILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAF 197
             + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA 
Sbjct: 119 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 178

Query: 198 YDMKDECLLEM 208
           Y+++ E  L +
Sbjct: 179 YNIQKESTLHL 189



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 76/189 (40%), Positives = 110/189 (58%), Gaps = 6/189 (3%)

Query: 174 GVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVE 230
           G+      +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE
Sbjct: 3   GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 62

Query: 231 VLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQ 287
               + +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    Q
Sbjct: 63  SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQ 122

Query: 288 IFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQ 347
           IFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQ
Sbjct: 123 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 182

Query: 348 KHSTLHMVL 356
           K STLH+VL
Sbjct: 183 KESTLHLVL 191



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 70/188 (37%), Positives = 104/188 (55%), Gaps = 4/188 (2%)

Query: 95  KEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNL 154
           KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +  + IFVK  TG+ + L
Sbjct: 1   KEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL 59

Query: 155 EVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPS 211
           EV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+++ E  L +      
Sbjct: 60  EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 119

Query: 212 SIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASY 271
            +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y
Sbjct: 120 GMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 179

Query: 272 GIKNNYVL 279
            I+    L
Sbjct: 180 NIQKESTL 187



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 96/184 (52%), Gaps = 9/184 (4%)

Query: 252 NQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTV 308
            Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+
Sbjct: 8   QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 67

Query: 309 QDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLI 368
            +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +      
Sbjct: 68  DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKT 127

Query: 369 FIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKV 422
               +I+L +  S+  +  K K Q         + L+     L+D RTLADY +     +
Sbjct: 128 LTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 187

Query: 423 VLVF 426
            LV 
Sbjct: 188 HLVL 191



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 81/135 (60%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 59  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 118

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 119 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 176

Query: 120 TSMNIKSESIIHLVF 134
              NI+ ES +HLV 
Sbjct: 177 ADYNIQKESTLHLVL 191


>gi|402586659|gb|EJW80596.1| polyubiquitin, partial [Wuchereria bancrofti]
          Length = 198

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 80/191 (41%), Positives = 114/191 (59%), Gaps = 3/191 (1%)

Query: 19  KEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVV 77
           KEGI  D   L FAG +LE GR L DY I+  STLH + +    M++FVK  T +T T +
Sbjct: 2   KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT-L 60

Query: 78  EAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPK 137
           E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV   +
Sbjct: 61  EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLR 119

Query: 138 EILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAF 197
             + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ 
Sbjct: 120 GGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 179

Query: 198 YDMKDECLLEM 208
           Y+++ E  L +
Sbjct: 180 YNIQKESTLHL 190



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 73/189 (38%), Positives = 111/189 (58%), Gaps = 6/189 (3%)

Query: 174 GVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVE 230
           G+      +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE
Sbjct: 4   GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 63

Query: 231 VLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQ 287
               + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    Q
Sbjct: 64  ASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 123

Query: 288 IFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQ 347
           IFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQ
Sbjct: 124 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 183

Query: 348 KHSTLHMVL 356
           K STLH+VL
Sbjct: 184 KESTLHLVL 192



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 105/188 (55%), Gaps = 4/188 (2%)

Query: 95  KEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNL 154
           KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV   +  + IFVK  TG+ + L
Sbjct: 2   KEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL 60

Query: 155 EVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPS 211
           EV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+++ E  L +      
Sbjct: 61  EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 120

Query: 212 SIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASY 271
            +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y
Sbjct: 121 GMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 180

Query: 272 GIKNNYVL 279
            I+    L
Sbjct: 181 NIQKESTL 188



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 97/184 (52%), Gaps = 9/184 (4%)

Query: 252 NQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTV 308
            Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+
Sbjct: 9   QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTI 68

Query: 309 QDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLI 368
           ++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +      
Sbjct: 69  ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKT 128

Query: 369 FIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKV 422
               +I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     +
Sbjct: 129 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 188

Query: 423 VLVF 426
            LV 
Sbjct: 189 HLVL 192



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 84/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 60  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 119

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 120 GGMQIFVKTLTGKTIT-LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 177

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 178 SDYNIQKESTLHLVL 192



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 55/116 (47%), Gaps = 6/116 (5%)

Query: 317 DKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISL 376
           DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +I+L
Sbjct: 1   DKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL 60

Query: 377 SISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
            +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 61  EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 116


>gi|290974051|ref|XP_002669760.1| polyubiquitin [Naegleria gruberi]
 gi|284083311|gb|EFC37016.1| polyubiquitin [Naegleria gruberi]
          Length = 274

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/268 (32%), Positives = 134/268 (50%), Gaps = 51/268 (19%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ +  I +VK+ +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---------------------FPS--------------------------- 211
           ++ E  L +                     +PS                           
Sbjct: 61  IQKESTLHLTLTGKTITLEVESNDTIENVKYPSRSTKIDLSLVSNWKMESTLHLVLRLRG 120

Query: 212 SIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASY 271
            +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y
Sbjct: 121 GMQIFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 180

Query: 272 GIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSI 328
            I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q +
Sbjct: 181 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRL 240

Query: 329 VFAGKRLFENHVLARYNIQKHSTLHMVL 356
           +FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 241 IFAGKQLEDGRTLSDYNIQKESTLHLVL 268



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/254 (33%), Positives = 129/254 (50%), Gaps = 48/254 (18%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHF----- 54
           ++V+ ++ I+N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH      
Sbjct: 15  LEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLTLTGK 74

Query: 55  -------------------------------------LHQNL---SEMKLFVKIPTNQTA 74
                                                LH  L     M++FVK  T +T 
Sbjct: 75  TITLEVESNDTIENVKYPSRSTKIDLSLVSNWKMESTLHLVLRLRGGMQIFVKTLTGKTI 134

Query: 75  TVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVF 134
           T +E     T++N+K+ IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV 
Sbjct: 135 T-LEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVL 192

Query: 135 CPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKT 194
             +  + IFVK  TG+ + LEV+ +  I +VK+ +    G+      +I+ GK+LED +T
Sbjct: 193 RLRGGMQIFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 252

Query: 195 LAFYDMKDECLLEM 208
           L+ Y+++ E  L +
Sbjct: 253 LSDYNIQKESTLHL 266


>gi|124784704|gb|ABN14989.1| polyubiquitin [Taenia asiatica]
          Length = 200

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 80/201 (39%), Positives = 119/201 (59%), Gaps = 6/201 (2%)

Query: 22  ISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAM 80
           I  D   L FAG +LE GR L DY I+  STLH + +    M++FVK  T +T T +E  
Sbjct: 2   IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT-LEVE 60

Query: 81  PYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEIL 140
           P  +++N+K  IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV   +  +
Sbjct: 61  PSDSIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGM 119

Query: 141 SIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDM 200
            IFVK  TG+ + LEV+ S +I +VKA +    G+      +I+ GK+LED +TL+ Y++
Sbjct: 120 QIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 179

Query: 201 KDECLLEM---FPSSIQIFVR 218
           + E  L +       ++IFV+
Sbjct: 180 QKESTLHLVLRLRGGMRIFVK 200



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 72/181 (39%), Positives = 110/181 (60%), Gaps = 6/181 (3%)

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 9   LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENV 68

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 69  KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 128

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +++++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 129 KTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 188

Query: 356 L 356
           L
Sbjct: 189 L 189



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 110/200 (55%), Gaps = 7/200 (3%)

Query: 98  IQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVK 157
           I  DQ  L++ GK L ED  T++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+
Sbjct: 2   IPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 60

Query: 158 HSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQ 214
            S +I +VKA +    G+      +I+ GK+LED +TL+ Y+++ E  L +       +Q
Sbjct: 61  PSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 120

Query: 215 IFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIK 274
           IFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y I+
Sbjct: 121 IFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 180

Query: 275 NNYVLDV---LPSPFQIFVK 291
               L +   L    +IFVK
Sbjct: 181 KESTLHLVLRLRGGMRIFVK 200



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 65/146 (44%), Positives = 91/146 (62%), Gaps = 3/146 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 57  LEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 116

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  +++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 117 GGMQIFVKTLTGKTIT-LEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 174

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVK 145
           +  NI+ ES +HLV   +  + IFVK
Sbjct: 175 SDYNIQKESTLHLVLRLRGGMRIFVK 200



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 98/184 (53%), Gaps = 9/184 (4%)

Query: 252 NQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTV 308
            Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +++
Sbjct: 6   QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSI 65

Query: 309 QDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLI 368
           ++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +      
Sbjct: 66  ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKT 125

Query: 369 FIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKV 422
               +I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     +
Sbjct: 126 LTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 185

Query: 423 VLVF 426
            LV 
Sbjct: 186 HLVL 189



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 6/111 (5%)

Query: 322 PLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISIS 381
           P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S
Sbjct: 3   PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPS 62

Query: 382 EVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           +  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 63  DSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 113


>gi|307110244|gb|EFN58480.1| hypothetical protein CHLNCDRAFT_48528 [Chlorella variabilis]
          Length = 229

 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 80/224 (35%), Positives = 125/224 (55%), Gaps = 6/224 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLV 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L     I VKT  GK I +D++P +TVQ +K 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMMIKVKTLTGKEIEIDIEPTDTVQRIKE 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLA 357
           ++ +K   P   Q ++FAGK + ++ +   YNI+  S LH+VLA
Sbjct: 181 RVEEKEGIPPVQQRLIFAGKAMNDDKMAKDYNIEGGSVLHLVLA 224



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 77/209 (36%), Positives = 119/209 (56%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T++N+K  IQ KEGI  DQ  LV+ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIENVKAKIQDKEGIPPDQQRLVFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + I VK  TG+ + ++++ +  ++ +K  V    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMMIKVKTLTGKEIEIDIEPTDTVQRIKERVEEKEGIPPVQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK + D K    Y+++   +L +
Sbjct: 193 QRLIFAGKAMNDDKMAKDYNIEGGSVLHL 221



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 76/221 (34%), Positives = 118/221 (53%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +++ GK+LED +TLA Y+++ E  L +       + I V+T   + + +++E    V+ +
Sbjct: 119 LVFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMMIKVKTLTGKEIEIDIEPTDTVQRI 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           KE V     +    Q L +AG  +   K    Y I+   VL
Sbjct: 179 KERVEEKEGIPPVQQRLIFAGKAMNDDKMAKDYNIEGGSVL 219



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 76/214 (35%), Positives = 115/214 (53%), Gaps = 9/214 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q +V
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLV 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSS----RIIELPLIFIDPSISLSISISEVKE 385
           FAGK+L +   LA YNIQK STLH+VL        ++  L    I+  I  + ++  +KE
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMMIKVKTLTGKEIEIDIEPTDTVQRIKE 180

Query: 386 MAKVK--FQAAVKELLVDQVALQDDRTLADYGMD 417
             + K       + L+    A+ DD+   DY ++
Sbjct: 181 RVEEKEGIPPVQQRLIFAGKAMNDDKMAKDYNIE 214



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 79/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLV 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTLADY +     + LV 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVL 147


>gi|217074596|gb|ACJ85658.1| unknown [Medicago truncatula]
          Length = 228

 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 85/206 (41%), Positives = 115/206 (55%), Gaps = 3/206 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+KT IQ KEGI  DQ  LV+ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKTKIQDKEGIPPDQQRLVFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVKA TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKALTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECL 205
             +I+ G  L        Y  K+  L
Sbjct: 193 QRLIFAGNNLRMGGLSLIYIQKESTL 218



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 124/224 (55%), Gaps = 7/224 (3%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTIILEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLV 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVK   GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKALTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLA 357
           K+ DK   P   Q ++FAG  L    +   Y IQK STLH+V A
Sbjct: 181 KIQDKEGIPPDQQRLIFAGNNLRMGGLSLIY-IQKESTLHLVSA 223



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/204 (35%), Positives = 111/204 (54%), Gaps = 5/204 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T  ++E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTI-ILEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +++ GK+LED +TLA Y+++ E  L +       +QIFV+    + + LEVE    + +V
Sbjct: 119 LVFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKALTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKL 262
           K  + +   +    Q L +AG  L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGNNL 202



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 70/183 (38%), Positives = 100/183 (54%), Gaps = 3/183 (1%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTIILEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q +V
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLV 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKALTGKTITLEVESSDTIDNVKA 180

Query: 390 KFQ 392
           K Q
Sbjct: 181 KIQ 183



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 77/147 (52%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTI L+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTIILEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  +  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLV 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTLADY +     + LV 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVL 147



 Score = 42.4 bits (98), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 32/55 (58%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGRLVDYGIRNNSTLHFL 55
           ++V+ S+ I N+KA I  KEGI  D   L FAG+ L  G L    I+  STLH +
Sbjct: 167 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGNNLRMGGLSLIYIQKESTLHLV 221


>gi|56199554|gb|AAV84266.1| ubiquitin [Culicoides sonorensis]
          Length = 191

 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 77/185 (41%), Positives = 111/185 (60%), Gaps = 3/185 (1%)

Query: 25  DICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYH 83
           D   L FAG +LE GR L DY I+  STLH + +    M++FVK  T +T T +E  P  
Sbjct: 1   DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT-LEVEPSD 59

Query: 84  TVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIF 143
           T++N+K  IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV   +  + IF
Sbjct: 60  TIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIF 118

Query: 144 VKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDE 203
           VK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+++ E
Sbjct: 119 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 178

Query: 204 CLLEM 208
             L +
Sbjct: 179 STLHL 183



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 73/181 (40%), Positives = 110/181 (60%), Gaps = 6/181 (3%)

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 5   LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 64

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 65  KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 124

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 125 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 184

Query: 356 L 356
           L
Sbjct: 185 L 185



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 68/183 (37%), Positives = 98/183 (53%), Gaps = 9/183 (4%)

Query: 253 QDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQ 309
           Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T++
Sbjct: 3   QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 62

Query: 310 DVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIF 369
           +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +       
Sbjct: 63  NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 122

Query: 370 IDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVV 423
              +I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + 
Sbjct: 123 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 182

Query: 424 LVF 426
           LV 
Sbjct: 183 LVL 185



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/182 (35%), Positives = 101/182 (55%), Gaps = 4/182 (2%)

Query: 101 DQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSF 160
           DQ  L++ GK L ED  T++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S 
Sbjct: 1   DQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 59

Query: 161 AIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFV 217
            I +VKA +    G+      +I+ GK+LED +TL+ Y+++ E  L +       +QIFV
Sbjct: 60  TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 119

Query: 218 RTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNY 277
           +T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y I+   
Sbjct: 120 KTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 179

Query: 278 VL 279
            L
Sbjct: 180 TL 181



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/135 (45%), Positives = 85/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 53  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 112

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 113 GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 170

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 171 SDYNIQKESTLHLVL 185


>gi|86370988|gb|ABC94632.1| ubiquitin C [Ictalurus punctatus]
          Length = 192

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 77/185 (41%), Positives = 111/185 (60%), Gaps = 3/185 (1%)

Query: 25  DICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYH 83
           D   L FAG +LE GR L DY I+  STLH + +    M++FVK  T +T T +E  P  
Sbjct: 2   DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT-LEVEPSD 60

Query: 84  TVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIF 143
           T++N+K  IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV   +  + IF
Sbjct: 61  TIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIF 119

Query: 144 VKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDE 203
           VK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+++ E
Sbjct: 120 VKTLTGKTITLEVEPSDTIGNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 179

Query: 204 CLLEM 208
             L +
Sbjct: 180 STLHL 184



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 73/181 (40%), Positives = 109/181 (60%), Gaps = 6/181 (3%)

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 6   LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 65

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 66  KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 125

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 126 KTITLEVEPSDTIGNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 185

Query: 356 L 356
           L
Sbjct: 186 L 186



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/182 (35%), Positives = 101/182 (55%), Gaps = 4/182 (2%)

Query: 101 DQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSF 160
           DQ  L++ GK L ED  T++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S 
Sbjct: 2   DQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 60

Query: 161 AIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFV 217
            I +VKA +    G+      +I+ GK+LED +TL+ Y+++ E  L +       +QIFV
Sbjct: 61  TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 120

Query: 218 RTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNY 277
           +T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y I+   
Sbjct: 121 KTLTGKTITLEVEPSDTIGNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 180

Query: 278 VL 279
            L
Sbjct: 181 TL 182



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 97/184 (52%), Gaps = 9/184 (4%)

Query: 252 NQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTV 308
            Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+
Sbjct: 3   QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTI 62

Query: 309 QDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLI 368
           ++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +      
Sbjct: 63  ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKT 122

Query: 369 FIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKV 422
               +I+L +  S+     K K Q         + L+     L+D RTL+DY +     +
Sbjct: 123 LTGKTITLEVEPSDTIGNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 182

Query: 423 VLVF 426
            LV 
Sbjct: 183 HLVL 186



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 62/135 (45%), Positives = 84/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 54  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 113

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 114 GGMQIFVKTLTGKTIT-LEVEPSDTIGNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 171

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 172 SDYNIQKESTLHLVL 186


>gi|324515150|gb|ADY46106.1| Polyubiquitin-A [Ascaris suum]
          Length = 267

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/223 (33%), Positives = 127/223 (56%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  +G+ + LEV+ S  I +VK  +    G+   +  +IY G+ L+D +T + Y+
Sbjct: 1   MQIFVKTISGKTITLEVEPSDTIENVKTKIQDKEGIPPIEQRLIYAGRHLQDCRTASDYN 60

Query: 200 MKDECLLEMF---PSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++    L +    P  +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IEKASTLHLLLRLPCGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIRPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +L+  + +  Y I+N  ++ +   L     IF+KT  G T+TL+V+  + VQ VK 
Sbjct: 121 FAGKQLDDHQKIGDYNIRNGSIVHLVFRLRGGMLIFIKTLTGVTMTLEVELSDKVQHVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K++DK   P   Q +++AGK+L ++  L+ YNIQK ST+H+VL
Sbjct: 181 KIYDKEGIPPDQQRLIYAGKQLEDDRTLSDYNIQKESTVHLVL 223



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/243 (34%), Positives = 136/243 (55%), Gaps = 6/243 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGRLV-DYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI      L +AG  L+  R   DY I   STLH L +  
Sbjct: 15  LEVEPSDTIENVKTKIQDKEGIPPIEQRLIYAGRHLQDCRTASDYNIEKASTLHLLLRLP 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI+ DQ  L++ GK L +D   +
Sbjct: 75  CGMQIFVKTLTGKTITL-EVESSDTIENVKAKIQDKEGIRPDQQRLIFAGKQL-DDHQKI 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI++ SI+HLVF  +  + IF+K  TG  + LEV+ S  ++ VKA +    G+    
Sbjct: 133 GDYNIRNGSIVHLVFRLRGGMLIFIKTLTGVTMTLEVELSDKVQHVKAKIYDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +IY GK+LED +TL+ Y+++ E  + +       + I + T + + + L+V+    V 
Sbjct: 193 QRLIYAGKQLEDDRTLSDYNIQKESTVHLVLRLRGGMDISINTLVGDAMTLQVDASDSVE 252

Query: 237 DVK 239
           ++K
Sbjct: 253 NIK 255



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 76/227 (33%), Positives = 119/227 (52%), Gaps = 17/227 (7%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L YAG  L+ C+T + Y 
Sbjct: 1   MQIFVKTISGKTITLEVEPSDTIENVKTKIQDKEGIPPIEQRLIYAGRHLQDCRTASDYN 60

Query: 273 IKNNYVLDVL---PSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +L   P   QIFVKT  GKTITL+V+  +T+++VK K+ DK       Q ++
Sbjct: 61  IEKASTLHLLLRLPCGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIRPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDP----SISLSISISEVKE 385
           FAGK+L ++  +  YNI+  S +H+V     R+    LIFI      +++L + +S+  +
Sbjct: 121 FAGKQLDDHQKIGDYNIRNGSIVHLVF----RLRGGMLIFIKTLTGVTMTLEVELSDKVQ 176

Query: 386 MAKVKF------QAAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
             K K           + L+     L+DDRTL+DY +     V LV 
Sbjct: 177 HVKAKIYDKEGIPPDQQRLIYAGKQLEDDRTLSDYNIQKESTVHLVL 223



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/168 (37%), Positives = 96/168 (57%), Gaps = 3/168 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLE-AGRLVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +L+   ++ DY IRN S +H + +  
Sbjct: 91  LEVESSDTIENVKAKIQDKEGIRPDQQRLIFAGKQLDDHQKIGDYNIRNGSIVHLVFRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M +F+K  T  T T+ E      VQ++K  I  KEGI  DQ  L+Y GK L ED  T+
Sbjct: 151 GGMLIFIKTLTGVTMTL-EVELSDKVQHVKAKIYDKEGIPPDQQRLIYAGKQL-EDDRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKA 167
           +  NI+ ES +HLV   +  + I +    G+ + L+V  S ++ ++KA
Sbjct: 209 SDYNIQKESTVHLVLRLRGGMDISINTLVGDAMTLQVDASDSVENIKA 256


>gi|302847323|ref|XP_002955196.1| polyubiquitin [Volvox carteri f. nagariensis]
 gi|300259488|gb|EFJ43715.1| polyubiquitin [Volvox carteri f. nagariensis]
          Length = 229

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/224 (34%), Positives = 125/224 (55%), Gaps = 6/224 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L     I VKT  GK I +D++P +T++ +K 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMMIKVKTLTGKEIEIDIEPSDTIERIKE 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLA 357
           ++ +K   P   Q ++FAGK++ ++     YNI+  S LH+VLA
Sbjct: 181 RVEEKEGIPPVQQRLIFAGKQMNDDKQAKDYNIEGGSVLHLVLA 224



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 119/209 (56%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + I VK  TG+ + ++++ S  I  +K  V    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMMIKVKTLTGKEIEIDIEPSDTIERIKERVEEKEGIPPVQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK++ D K    Y+++   +L +
Sbjct: 193 QRLIFAGKQMNDDKQAKDYNIEGGSVLHL 221



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 76/221 (34%), Positives = 118/221 (53%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       + I V+T   + + +++E    +  +
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMMIKVKTLTGKEIEIDIEPSDTIERI 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           KE V     +    Q L +AG ++   K    Y I+   VL
Sbjct: 179 KERVEEKEGIPPVQQRLIFAGKQMNDDKQAKDYNIEGGSVL 219



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 76/214 (35%), Positives = 114/214 (53%), Gaps = 9/214 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSS----RIIELPLIFIDPSISLSISISEVKE 385
           FAGK+L +   LA YNIQK STLH+VL        ++  L    I+  I  S +I  +KE
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMMIKVKTLTGKEIEIDIEPSDTIERIKE 180

Query: 386 MAKVK--FQAAVKELLVDQVALQDDRTLADYGMD 417
             + K       + L+     + DD+   DY ++
Sbjct: 181 RVEEKEGIPPVQQRLIFAGKQMNDDKQAKDYNIE 214



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 79/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTLADY +     + LV 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVL 147


>gi|82512|pir||PS0380 ubiquitin precursor - rice (fragment)
 gi|218189|dbj|BAA02241.1| poly-ubiquitin [Oryza sativa Japonica Group]
          Length = 189

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 75/181 (41%), Positives = 108/181 (59%), Gaps = 6/181 (3%)

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 3   LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 62

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 63  KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 122

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 123 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 182

Query: 356 L 356
           L
Sbjct: 183 L 183



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/181 (41%), Positives = 107/181 (59%), Gaps = 3/181 (1%)

Query: 29  LFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQN 87
           L FAG +LE GR L DY I+  STLH + +    M++FVK  T +T T +E     T+ N
Sbjct: 3   LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT-LEVESSDTIDN 61

Query: 88  IKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAA 147
           +K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +  + IFVK  
Sbjct: 62  VKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 120

Query: 148 TGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLE 207
           TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+++ E  L 
Sbjct: 121 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 180

Query: 208 M 208
           +
Sbjct: 181 L 181



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/183 (37%), Positives = 96/183 (52%), Gaps = 9/183 (4%)

Query: 253 QDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQ 309
           Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ 
Sbjct: 1   QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 60

Query: 310 DVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIF 369
           +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +       
Sbjct: 61  NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 120

Query: 370 IDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVV 423
              +I+L +  S+  +  K K Q         + L+     L+D RTLADY +     + 
Sbjct: 121 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 180

Query: 424 LVF 426
           LV 
Sbjct: 181 LVL 183



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 64/178 (35%), Positives = 98/178 (55%), Gaps = 4/178 (2%)

Query: 105 LVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRD 164
           L++ GK L ED  T+   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +
Sbjct: 3   LIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDN 61

Query: 165 VKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPI 221
           VKA +    G+      +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T  
Sbjct: 62  VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLT 121

Query: 222 EEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
            + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 122 GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 179



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 81/135 (60%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 51  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 110

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 111 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 168

Query: 120 TSMNIKSESIIHLVF 134
              NI+ ES +HLV 
Sbjct: 169 ADYNIQKESTLHLVL 183


>gi|403352030|gb|EJY75518.1| Polyubiquitin-C [Oxytricha trifallax]
          Length = 385

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 109/385 (28%), Positives = 184/385 (47%), Gaps = 30/385 (7%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVKI  N     ++     T+  +K  IQ K     D   L + GK L ++  T+  
Sbjct: 1   MQIFVKI-VNGKTYAIDVDESDTIAMVKQKIQEKVVTLPDPLWLAFGGKFL-DNKKTIKD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI ++S ++ V   K  + IFV+  TG+ + +EV+    I  ++A +    G+   DHI
Sbjct: 59  YNIGNQSTLYQVLNLKGGVQIFVRTLTGKTITIEVELDDTIECIRAKIQDKPGM-PPDHI 117

Query: 182 -MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRD 237
            +++ GKKL+D K L+ Y ++ E  + M       +QIFV+      + LEVE    +  
Sbjct: 118 RLVFGGKKLQDGKILSDYGLQKESTIHMVLRLRGGMQIFVKALTGRTITLEVEQDESIES 177

Query: 238 VKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNN---YVLDVLPSPFQIFVKTWG 294
           ++  + +   +      L + G +L   KTL  YGI+     + +  L     I+VKT  
Sbjct: 178 IRAKLQDKEGIPPDQLRLIFGGKELLVGKTLKDYGIQKESTIFTVLRLRGGMNIYVKTLS 237

Query: 295 GKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHM 354
           GKT TL+V+  ++++ ++ K+ DK   P     +VF GK L +   L+ YNIQ  STLH+
Sbjct: 238 GKTKTLEVEESDSIEIIREKILDKGWVPPDQVRLVFNGKLLEDGRYLSDYNIQNESTLHL 297

Query: 355 VL-----------APSSRIIELPLIFIDPSISLSISISEVKEMAKVK--FQAAVKELLVD 401
           VL               + + LP+   +P       I  +K M + K    A    L++ 
Sbjct: 298 VLKLRIGMQIHAKTLGGKTLTLPVDENEP-------IENIKAMIQNKEGIPADQLRLIIG 350

Query: 402 QVALQDDRTLADYGMDLSEKVVLVF 426
              L+D +TL+DY +     +++V 
Sbjct: 351 AKQLEDGKTLSDYNIQNDYAILIVL 375



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 174/361 (48%), Gaps = 9/361 (2%)

Query: 3   VKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGRLV-DYGIRNNSTLHFLHQNLSE 61
           V +S+ I  +K  I  K     D   L F G  L+  + + DY I N STL+ +      
Sbjct: 17  VDESDTIAMVKQKIQEKVVTLPDPLWLAFGGKFLDNKKTIKDYNIGNQSTLYQVLNLKGG 76

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           +++FV+  T +T T+ E     T++ I+  IQ K G+  D   LV+ GK L +D   ++ 
Sbjct: 77  VQIFVRTLTGKTITI-EVELDDTIECIRAKIQDKPGMPPDHIRLVFGGKKL-QDGKILSD 134

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
             ++ ES IH+V   +  + IFVKA TG  + LEV+   +I  ++A +    G+      
Sbjct: 135 YGLQKESTIHMVLRLRGGMQIFVKALTGRTITLEVEQDESIESIRAKLQDKEGIPPDQLR 194

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLL---EMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+L   KTL  Y ++ E  +         + I+V+T   +   LEVE    +  +
Sbjct: 195 LIFGGKELLVGKTLKDYGIQKESTIFTVLRLRGGMNIYVKTLSGKTKTLEVEESDSIEII 254

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           +E + +   +      L + G  LE  + L+ Y I+N   L +   L    QI  KT GG
Sbjct: 255 REKILDKGWVPPDQVRLVFNGKLLEDGRYLSDYNIQNESTLHLVLKLRIGMQIHAKTLGG 314

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KT+TL V     ++++K  + +K   P     ++   K+L +   L+ YNIQ    + +V
Sbjct: 315 KTLTLPVDENEPIENIKAMIQNKEGIPADQLRLIIGAKQLEDGKTLSDYNIQNDYAILIV 374

Query: 356 L 356
           L
Sbjct: 375 L 375



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 116/204 (56%), Gaps = 3/204 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V++ E I++++A +  KEGI  D   L F G  L  G+ L DYGI+  ST+  + +  
Sbjct: 167 LEVEQDESIESIRAKLQDKEGIPPDQLRLIFGGKELLVGKTLKDYGIQKESTIFTVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M ++VK  + +T T +E     +++ I+  I  K  +  DQ  LV++GKLL ED   +
Sbjct: 227 GGMNIYVKTLSGKTKT-LEVEESDSIEIIREKILDKGWVPPDQVRLVFNGKLL-EDGRYL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI++ES +HLV   +  + I  K   G+ + L V  +  I ++KA++ +  G+ A  
Sbjct: 285 SDYNIQNESTLHLVLKLRIGMQIHAKTLGGKTLTLPVDENEPIENIKAMIQNKEGIPADQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDE 203
             +I   K+LED KTL+ Y+++++
Sbjct: 345 LRLIIGAKQLEDGKTLSDYNIQND 368


>gi|182407852|gb|ACB87917.1| polyubiquitin 2 [Malus x domestica]
          Length = 177

 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 77/178 (43%), Positives = 104/178 (58%), Gaps = 3/178 (1%)

Query: 19  KEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVV 77
           KEGI  D   L FAG +LE GR L DY I+  STLH + +    M++FVK  T +T T +
Sbjct: 2   KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT-L 60

Query: 78  EAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPK 137
           E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +
Sbjct: 61  EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLR 119

Query: 138 EILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTL 195
             + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL
Sbjct: 120 RGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKDGIPPDQQTLIFAGKQLEDGRTL 177



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/177 (37%), Positives = 99/177 (55%), Gaps = 4/177 (2%)

Query: 95  KEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNL 154
           KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +  + IFVK  TG+ + L
Sbjct: 2   KEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL 60

Query: 155 EVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPS 211
           EV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+++ E  L +      
Sbjct: 61  EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRR 120

Query: 212 SIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTL 268
            +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL
Sbjct: 121 GMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKDGIPPDQQTLIFAGKQLEDGRTL 177



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/174 (36%), Positives = 98/174 (56%), Gaps = 6/174 (3%)

Query: 174 GVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVE 230
           G+      +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE
Sbjct: 4   GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 63

Query: 231 VLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQ 287
               + +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    Q
Sbjct: 64  SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRRGMQ 123

Query: 288 IFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVL 341
           IFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q+++FAGK+L +   L
Sbjct: 124 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKDGIPPDQQTLIFAGKQLEDGRTL 177



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 61/148 (41%), Positives = 84/148 (56%), Gaps = 11/148 (7%)

Query: 252 NQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTV 308
            Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+
Sbjct: 9   QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 68

Query: 309 QDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLI 368
            +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL    R+     I
Sbjct: 69  DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL----RLRRGMQI 124

Query: 369 FI----DPSISLSISISEVKEMAKVKFQ 392
           F+      +I+L +  S+  +  K K Q
Sbjct: 125 FVKTLTGKTITLEVESSDTIDNVKAKIQ 152



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 54/120 (45%), Positives = 73/120 (60%), Gaps = 3/120 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 60  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 119

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ K+GI  DQ TL++ GK L ED  T+
Sbjct: 120 RGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKDGIPPDQQTLIFAGKQL-EDGRTL 177



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 55/116 (47%), Gaps = 6/116 (5%)

Query: 317 DKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISL 376
           DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +I+L
Sbjct: 1   DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL 60

Query: 377 SISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
            +  S+  +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 61  EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 116


>gi|339232974|ref|XP_003381604.1| ubiquitin family protein [Trichinella spiralis]
 gi|316979565|gb|EFV62342.1| ubiquitin family protein [Trichinella spiralis]
          Length = 210

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/190 (41%), Positives = 112/190 (58%), Gaps = 3/190 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKL 189
             +I+ G +L
Sbjct: 193 QRLIFAGIEL 202



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/203 (36%), Positives = 115/203 (56%), Gaps = 6/203 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKG 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLF 336
           K+ DK   P   Q ++FAG  L+
Sbjct: 181 KIQDKEGIPPDQQRLIFAGIELY 203



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/204 (36%), Positives = 116/204 (56%), Gaps = 5/204 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKL 262
           K  + +   +    Q L +AG +L
Sbjct: 179 KGKIQDKEGIPPDQQRLIFAGIEL 202



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/183 (37%), Positives = 102/183 (55%), Gaps = 3/183 (1%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKG 180

Query: 390 KFQ 392
           K Q
Sbjct: 181 KIQ 183



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 80/147 (54%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|195587566|ref|XP_002083532.1| GD13313 [Drosophila simulans]
 gi|194195541|gb|EDX09117.1| GD13313 [Drosophila simulans]
          Length = 195

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/176 (43%), Positives = 108/176 (61%), Gaps = 3/176 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGV 175
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 188



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/181 (39%), Positives = 107/181 (59%), Gaps = 5/181 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 K 239
           K
Sbjct: 179 K 179



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/189 (37%), Positives = 108/189 (57%), Gaps = 6/189 (3%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTP 322
           K+ DK   P
Sbjct: 181 KIQDKEGIP 189



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/183 (37%), Positives = 102/183 (55%), Gaps = 3/183 (1%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 390 KFQ 392
           K Q
Sbjct: 181 KIQ 183



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 80/147 (54%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 48/106 (45%), Positives = 67/106 (63%), Gaps = 2/106 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTL 105
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ ++
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQGSV 195


>gi|148908993|gb|ABR17600.1| unknown [Picea sitchensis]
          Length = 252

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 83/232 (35%), Positives = 126/232 (54%), Gaps = 10/232 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + +FVK  TG+ ++LEV+ S  I ++KA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQVFVKTLTGKTISLEVESSDIIDNLKADIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQSLI 120

Query: 257 YAGTKLEACKTLASYGIK-------NNYVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQ 309
           +AG +LE  + LA Y I+        +++   L S   IFV T  G+ ITL V   +T+ 
Sbjct: 121 FAGKQLEDGRNLADYNIQKESTILGTSFIRVRLTSDMLIFVITLTGEAITLVVATSDTIY 180

Query: 310 DVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSR 361
           DVK K+  K   P   Q ++FAGK+L +   LA YNIQK STLH+V     R
Sbjct: 181 DVKAKIQGKKGIPPFRQRLIFAGKQLEDRRNLAYYNIQKWSTLHVVFCIPPR 232



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 86/213 (40%), Positives = 119/213 (55%), Gaps = 7/213 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I NLKA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDIIDNLKADIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ +L++ GK L ED   +
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGILPDQQSLIFAGKQL-EDGRNL 132

Query: 120 TSMNIKSES-IIHLVFCPKEILS---IFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGV 175
              NI+ ES I+   F    + S   IFV   TGE + L V  S  I DVKA +    G+
Sbjct: 133 ADYNIQKESTILGTSFIRVRLTSDMLIFVITLTGEAITLVVATSDTIYDVKAKIQGKKGI 192

Query: 176 SAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
                 +I+ GK+LED + LA+Y+++    L +
Sbjct: 193 PPFRQRLIFAGKQLEDRRNLAYYNIQKWSTLHV 225



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/228 (34%), Positives = 117/228 (51%), Gaps = 9/228 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T ++ E      + N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQVFVKTLTGKTISL-EVESSDIIDNLKADIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQS 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLL-------EMFPSSIQIFVRTPIEEIVRLEVEVLIV 234
           +I+ GK+LED + LA Y+++ E  +           S + IFV T   E + L V     
Sbjct: 119 LIFAGKQLEDGRNLADYNIQKESTILGTSFIRVRLTSDMLIFVITLTGEAITLVVATSDT 178

Query: 235 VRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVL 282
           + DVK  +     +    Q L +AG +LE  + LA Y I+    L V+
Sbjct: 179 IYDVKAKIQGKKGIPPFRQRLIFAGKQLEDRRNLAYYNIQKWSTLHVV 226



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 75/138 (54%), Gaps = 8/138 (5%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            Q+FVKT  GKTI+L+V+  + + ++K  + DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQVFVKTLTGKTISLEVESSDIIDNLKADIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAAVKELLVDQVA- 404
           IQK STLH+VL     +          +I+L +  S+  +  K K Q   + +L DQ + 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK-EGILPDQQSL 119

Query: 405 ------LQDDRTLADYGM 416
                 L+D R LADY +
Sbjct: 120 IFAGKQLEDGRNLADYNI 137



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/140 (40%), Positives = 80/140 (57%), Gaps = 7/140 (5%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTL---HFLH 56
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  ST+    F+ 
Sbjct: 91  LEVESSDTIDNVKAKIQDKEGILPDQQSLIFAGKQLEDGRNLADYNIQKESTILGTSFIR 150

Query: 57  QNL-SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKED 115
             L S+M +FV   T +  T+V A    T+ ++K  IQ K+GI   +  L++ GK L ED
Sbjct: 151 VRLTSDMLIFVITLTGEAITLVVAT-SDTIYDVKAKIQGKKGIPPFRQRLIFAGKQL-ED 208

Query: 116 TATMTSMNIKSESIIHLVFC 135
              +   NI+  S +H+VFC
Sbjct: 209 RRNLAYYNIQKWSTLHVVFC 228


>gi|224321|prf||1101405A ubiquitin precursor
          Length = 191

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 72/181 (39%), Positives = 108/181 (59%), Gaps = 6/181 (3%)

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 5   LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 64

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 65  KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 124

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 125 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 184

Query: 356 L 356
           L
Sbjct: 185 L 185



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 75/185 (40%), Positives = 110/185 (59%), Gaps = 3/185 (1%)

Query: 25  DICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYH 83
           D   L FAG +LE GR L DY I+  STLH + +    M++FVK  T +T T +E     
Sbjct: 1   DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT-LEVESSD 59

Query: 84  TVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIF 143
           T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV   +  + IF
Sbjct: 60  TIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIF 118

Query: 144 VKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDE 203
           VK  TG+ + LEV+ S  I +VK+ +    G+      +I+ GK+LED +TL+ Y+++ E
Sbjct: 119 VKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 178

Query: 204 CLLEM 208
             L +
Sbjct: 179 STLHL 183



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 63/182 (34%), Positives = 101/182 (55%), Gaps = 4/182 (2%)

Query: 101 DQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSF 160
           DQ  L++ GK L ED  T++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S 
Sbjct: 1   DQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD 59

Query: 161 AIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFV 217
            I +VK+ +    G+      +I+ GK+LED +TL+ Y+++ E  L +       +QIFV
Sbjct: 60  TIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 119

Query: 218 RTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNY 277
           +T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y I+   
Sbjct: 120 KTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 179

Query: 278 VL 279
            L
Sbjct: 180 TL 181



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 66/183 (36%), Positives = 96/183 (52%), Gaps = 9/183 (4%)

Query: 253 QDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQ 309
           Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ 
Sbjct: 3   QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 62

Query: 310 DVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIF 369
           +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +       
Sbjct: 63  NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 122

Query: 370 IDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVV 423
              +I+L +  S+  +  K K Q         + L+     L+D RTL+DY +     + 
Sbjct: 123 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 182

Query: 424 LVF 426
           LV 
Sbjct: 183 LVL 185



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 60/135 (44%), Positives = 83/135 (61%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 53  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 112

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 113 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 170

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 171 SDYNIQKESTLHLVL 185


>gi|379771652|gb|AFD18177.1| ubiquitin C, partial [Mylabris cichorii]
          Length = 204

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 77/182 (42%), Positives = 108/182 (59%), Gaps = 3/182 (1%)

Query: 3   VKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSE 61
           V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +    
Sbjct: 1   VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 60

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 61  MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 118

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +V+A +    G+      
Sbjct: 119 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVEAKIQDKEGIPPDQQR 178

Query: 182 MI 183
           +I
Sbjct: 179 LI 180



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 62/162 (38%), Positives = 95/162 (58%), Gaps = 4/162 (2%)

Query: 81  PYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEIL 140
           P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV   +  +
Sbjct: 3   PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGM 61

Query: 141 SIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDM 200
            IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y++
Sbjct: 62  QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 121

Query: 201 KDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVK 239
           + E  L +       +QIFV+T   + + LEVE    + +V+
Sbjct: 122 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVE 163



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 100/182 (54%), Gaps = 6/182 (3%)

Query: 156 VKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSS 212
           V+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+++ E  L +       
Sbjct: 1   VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 60

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 61  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 120

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++V+ K+ DK   P   Q ++
Sbjct: 121 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVEAKIQDKEGIPPDQQRLI 180

Query: 330 FA 331
             
Sbjct: 181 LP 182



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 61/167 (36%), Positives = 91/167 (54%), Gaps = 3/167 (1%)

Query: 229 VEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSP 285
           VE    + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L   
Sbjct: 1   VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 60

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 61  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 120

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ 392
           IQK STLH+VL     +          +I+L +  S+  E  + K Q
Sbjct: 121 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVEAKIQ 167



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/107 (44%), Positives = 67/107 (62%), Gaps = 2/107 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 75  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 134

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLV 106
             M++FVK  T +T T +E  P  T++N++  IQ KEGI  DQ  L+
Sbjct: 135 GGMQIFVKTLTGKTIT-LEVEPSDTIENVEAKIQDKEGIPPDQQRLI 180



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 67/131 (51%), Gaps = 6/131 (4%)

Query: 302 VQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSR 361
           V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     
Sbjct: 1   VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 60

Query: 362 IIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYG 415
           +          +I+L +  S+  E  K K Q         + L+     L+D RTL+DY 
Sbjct: 61  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 120

Query: 416 MDLSEKVVLVF 426
           +     + LV 
Sbjct: 121 IQKESTLHLVL 131


>gi|116783396|gb|ABK22925.1| unknown [Picea sitchensis]
          Length = 262

 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 82/227 (36%), Positives = 125/227 (55%), Gaps = 10/227 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + +FVK  TG+ ++LEV+ S  I ++KA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQVFVKTLTGKTISLEVESSDIIDNLKADIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQSLI 120

Query: 257 YAGTKLEACKTLASYGIK-------NNYVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQ 309
           +AG +LE  + LA Y I+        +++   L S   IFV T  G+ ITL V   +T+ 
Sbjct: 121 FAGKQLEDGRNLADYNIQKESTILGTSFIRVRLTSDMLIFVITLTGEAITLVVATSDTIY 180

Query: 310 DVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           DVK K+  K   P   Q ++FAGK+L +   LA YNIQK STLH+ L
Sbjct: 181 DVKAKIQGKKGIPPFRQRLIFAGKQLEDRRNLAYYNIQKWSTLHVDL 227



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/206 (41%), Positives = 117/206 (56%), Gaps = 7/206 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I NLKA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDIIDNLKADIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ +L++ GK L ED   +
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGILPDQQSLIFAGKQL-EDGRNL 132

Query: 120 TSMNIKSES-IIHLVFCPKEILS---IFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGV 175
              NI+ ES I+   F    + S   IFV   TGE + L V  S  I DVKA +    G+
Sbjct: 133 ADYNIQKESTILGTSFIRVRLTSDMLIFVITLTGEAITLVVATSDTIYDVKAKIQGKKGI 192

Query: 176 SAADHIMIYEGKKLEDSKTLAFYDMK 201
                 +I+ GK+LED + LA+Y+++
Sbjct: 193 PPFRQRLIFAGKQLEDRRNLAYYNIQ 218



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 79/227 (34%), Positives = 116/227 (51%), Gaps = 9/227 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T ++ E      + N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQVFVKTLTGKTISL-EVESSDIIDNLKADIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQS 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLL-------EMFPSSIQIFVRTPIEEIVRLEVEVLIV 234
           +I+ GK+LED + LA Y+++ E  +           S + IFV T   E + L V     
Sbjct: 119 LIFAGKQLEDGRNLADYNIQKESTILGTSFIRVRLTSDMLIFVITLTGEAITLVVATSDT 178

Query: 235 VRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV 281
           + DVK  +     +    Q L +AG +LE  + LA Y I+    L V
Sbjct: 179 IYDVKAKIQGKKGIPPFRQRLIFAGKQLEDRRNLAYYNIQKWSTLHV 225



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 75/138 (54%), Gaps = 8/138 (5%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            Q+FVKT  GKTI+L+V+  + + ++K  + DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQVFVKTLTGKTISLEVESSDIIDNLKADIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAAVKELLVDQVA- 404
           IQK STLH+VL     +          +I+L +  S+  +  K K Q   + +L DQ + 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK-EGILPDQQSL 119

Query: 405 ------LQDDRTLADYGM 416
                 L+D R LADY +
Sbjct: 120 IFAGKQLEDGRNLADYNI 137



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 53/137 (38%), Positives = 77/137 (56%), Gaps = 7/137 (5%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTL---HFLH 56
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  ST+    F+ 
Sbjct: 91  LEVESSDTIDNVKAKIQDKEGILPDQQSLIFAGKQLEDGRNLADYNIQKESTILGTSFIR 150

Query: 57  QNL-SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKED 115
             L S+M +FV   T +  T+V A    T+ ++K  IQ K+GI   +  L++ GK L ED
Sbjct: 151 VRLTSDMLIFVITLTGEAITLVVATS-DTIYDVKAKIQGKKGIPPFRQRLIFAGKQL-ED 208

Query: 116 TATMTSMNIKSESIIHL 132
              +   NI+  S +H+
Sbjct: 209 RRNLAYYNIQKWSTLHV 225


>gi|39939489|gb|AAR32784.1| polyubiquitin [Clusia minor]
          Length = 223

 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 77/189 (40%), Positives = 110/189 (58%), Gaps = 6/189 (3%)

Query: 35  RLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQ 93
           +LE GR L DY I+  STLH + +    M++FVK  T +T T +E     T+ N+K  IQ
Sbjct: 1   QLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQ 59

Query: 94  VKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVN 153
            KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +  + IFVK  TG+ + 
Sbjct: 60  DKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 118

Query: 154 LEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FP 210
           LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+++ E  L +     
Sbjct: 119 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 178

Query: 211 SSIQIFVRT 219
             +QIFV+T
Sbjct: 179 GGMQIFVKT 187



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 72/175 (41%), Positives = 103/175 (58%), Gaps = 6/175 (3%)

Query: 188 KLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVAN 244
           +LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +
Sbjct: 1   QLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD 60

Query: 245 IIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLD 301
              +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+
Sbjct: 61  KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 120

Query: 302 VQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 121 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 175



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 69/189 (36%), Positives = 102/189 (53%), Gaps = 6/189 (3%)

Query: 114 EDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVV 173
           ED  T+   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    
Sbjct: 3   EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 62

Query: 174 GVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVE 230
           G+      +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE
Sbjct: 63  GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 122

Query: 231 VLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQ 287
               + +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    Q
Sbjct: 123 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQ 182

Query: 288 IFVKTWGGK 296
           IFVKT  GK
Sbjct: 183 IFVKTLTGK 191



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 67/151 (44%), Positives = 90/151 (59%), Gaps = 3/151 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 43  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 102

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 103 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 160

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGE 150
              NI+ ES +HLV   +  + IFVK  TG+
Sbjct: 161 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 191



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/175 (37%), Positives = 91/175 (52%), Gaps = 9/175 (5%)

Query: 261 KLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFD 317
           +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ D
Sbjct: 1   QLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD 60

Query: 318 KLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLS 377
           K   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +I+L 
Sbjct: 61  KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 120

Query: 378 ISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           +  S+  +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 121 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 175


>gi|226473064|emb|CAX71218.1| polyubiquitin [Schistosoma japonicum]
          Length = 194

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/167 (44%), Positives = 104/167 (62%), Gaps = 3/167 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVK 166
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVK 179



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/181 (39%), Positives = 107/181 (59%), Gaps = 5/181 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 K 239
           K
Sbjct: 179 K 179



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 70/194 (36%), Positives = 108/194 (55%), Gaps = 3/194 (1%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  KV
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKV 180

Query: 390 KFQAAVKELLVDQV 403
           + +   + L ++ V
Sbjct: 181 RSRIRRESLPINNV 194



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 80/147 (54%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|302655191|ref|XP_003019389.1| hypothetical protein TRV_06592 [Trichophyton verrucosum HKI 0517]
 gi|291183107|gb|EFE38744.1| hypothetical protein TRV_06592 [Trichophyton verrucosum HKI 0517]
          Length = 438

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/202 (40%), Positives = 114/202 (56%), Gaps = 9/202 (4%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 19  LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 78

Query: 60  SEM------KLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLK 113
            E       +  VK  T +T T+ E     T+ N+KT IQ KEGI  DQ  L++ GK L 
Sbjct: 79  GETTTNTISQPVVKTLTGKTITL-EVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL- 136

Query: 114 EDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVV 173
           ED  T++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    
Sbjct: 137 EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKE 196

Query: 174 GVSAADHIMIYEGKKLEDSKTL 195
           G+      +I+ GK+LED +TL
Sbjct: 197 GIPPDQQRLIFAGKQLEDGRTL 218



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 75/214 (35%), Positives = 116/214 (54%), Gaps = 12/214 (5%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 5   MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 64

Query: 200 MKDECLL--------EMFPSSI-QIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSL 250
           ++ E  L        E   ++I Q  V+T   + + LEVE    + +VK  + +   +  
Sbjct: 65  IQKESTLHLVLRLRGETTTNTISQPVVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPP 124

Query: 251 GNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNT 307
             Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T
Sbjct: 125 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 184

Query: 308 VQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVL 341
           + +VK K+ DK   P   Q ++FAGK+L +   L
Sbjct: 185 IDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTL 218



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 70/215 (32%), Positives = 109/215 (50%), Gaps = 15/215 (6%)

Query: 212 SIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASY 271
           ++QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y
Sbjct: 4   TMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 63

Query: 272 GIKNNYVLDVL---------PSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTP 322
            I+    L ++          +  Q  VKT  GKTITL+V+  +T+ +VK K+ DK   P
Sbjct: 64  NIQKESTLHLVLRLRGETTTNTISQPVVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIP 123

Query: 323 LHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISE 382
              Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+
Sbjct: 124 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD 183

Query: 383 VKEMAKVKFQ------AAVKELLVDQVALQDDRTL 411
             +  K K Q         + L+     L+D RTL
Sbjct: 184 TIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTL 218



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/153 (36%), Positives = 83/153 (54%), Gaps = 12/153 (7%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 5   MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 64

Query: 346 IQKHSTLHMVL----APSSRIIELPLI--FIDPSISLSISISEVKEMAKVKFQ------A 393
           IQK STLH+VL      ++  I  P++      +I+L +  S+  +  K K Q       
Sbjct: 65  IQKESTLHLVLRLRGETTTNTISQPVVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPP 124

Query: 394 AVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
             + L+     L+D RTL+DY +     + LV 
Sbjct: 125 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 157



 Score = 44.7 bits (104), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 3/67 (4%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGRLVDYGIRN--NSTLHFLHQN 58
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR +  G+R    + L FL  +
Sbjct: 177 LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLWMGVRTLLGNDLFFL-TS 235

Query: 59  LSEMKLF 65
             EM+ F
Sbjct: 236 WDEMRFF 242


>gi|325302604|tpg|DAA34466.1| TPA_exp: ubiquitin [Amblyomma variegatum]
          Length = 194

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/167 (44%), Positives = 104/167 (62%), Gaps = 3/167 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 30  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 89

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 90  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 147

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVK 166
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK
Sbjct: 148 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVK 194



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/181 (39%), Positives = 107/181 (59%), Gaps = 5/181 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 16  MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 73

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 74  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 133

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 134 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 193

Query: 239 K 239
           K
Sbjct: 194 K 194



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/157 (41%), Positives = 95/157 (60%), Gaps = 4/157 (2%)

Query: 204 CLLEMFPS-SIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKL 262
           C L +  S ++QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +L
Sbjct: 6   CELRLKRSVTMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 65

Query: 263 EACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKL 319
           E  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK 
Sbjct: 66  EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 125

Query: 320 QTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
             P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 126 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 162



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 80/147 (54%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 16  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 75

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 76  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 135

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 136 FAGKQLEDGRTLSDYNIQKESTLHLVL 162


>gi|224284138|gb|ACN39806.1| unknown [Picea sitchensis]
          Length = 252

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/232 (35%), Positives = 125/232 (53%), Gaps = 10/232 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + +FVK  TG+ ++LEV+ S  I ++KA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQVFVKTLTGKTISLEVESSDIIDNLKADIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQSLI 120

Query: 257 YAGTKLEACKTLASYGIK-------NNYVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQ 309
           +AG +L   + LA Y I+        +++   L S   IFV T  G+ ITL V   +T+ 
Sbjct: 121 FAGKQLGDGRNLADYNIQKESTILGTSFIRVRLTSDMLIFVITLTGEAITLVVATSDTIY 180

Query: 310 DVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSR 361
           DVK K+  K   P   Q ++FAGK+L +   LA YNIQK STLH+V     R
Sbjct: 181 DVKAKIQGKKGIPPFRQRLIFAGKQLEDRRNLAYYNIQKWSTLHVVFCIPPR 232



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 85/213 (39%), Positives = 118/213 (55%), Gaps = 7/213 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I NLKA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDIIDNLKADIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ +L++ GK L  D   +
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGILPDQQSLIFAGKQLG-DGRNL 132

Query: 120 TSMNIKSES-IIHLVFCPKEILS---IFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGV 175
              NI+ ES I+   F    + S   IFV   TGE + L V  S  I DVKA +    G+
Sbjct: 133 ADYNIQKESTILGTSFIRVRLTSDMLIFVITLTGEAITLVVATSDTIYDVKAKIQGKKGI 192

Query: 176 SAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
                 +I+ GK+LED + LA+Y+++    L +
Sbjct: 193 PPFRQRLIFAGKQLEDRRNLAYYNIQKWSTLHV 225



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 78/228 (34%), Positives = 116/228 (50%), Gaps = 9/228 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T ++ E      + N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQVFVKTLTGKTISL-EVESSDIIDNLKADIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQS 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLL-------EMFPSSIQIFVRTPIEEIVRLEVEVLIV 234
           +I+ GK+L D + LA Y+++ E  +           S + IFV T   E + L V     
Sbjct: 119 LIFAGKQLGDGRNLADYNIQKESTILGTSFIRVRLTSDMLIFVITLTGEAITLVVATSDT 178

Query: 235 VRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVL 282
           + DVK  +     +    Q L +AG +LE  + LA Y I+    L V+
Sbjct: 179 IYDVKAKIQGKKGIPPFRQRLIFAGKQLEDRRNLAYYNIQKWSTLHVV 226



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 74/138 (53%), Gaps = 8/138 (5%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            Q+FVKT  GKTI+L+V+  + + ++K  + DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQVFVKTLTGKTISLEVESSDIIDNLKADIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAAVKELLVDQVA- 404
           IQK STLH+VL     +          +I+L +  S+  +  K K Q   + +L DQ + 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK-EGILPDQQSL 119

Query: 405 ------LQDDRTLADYGM 416
                 L D R LADY +
Sbjct: 120 IFAGKQLGDGRNLADYNI 137



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 55/140 (39%), Positives = 79/140 (56%), Gaps = 7/140 (5%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTL---HFLH 56
           ++V+ S+ I N+KA I  KEGI  D   L FAG +L  GR L DY I+  ST+    F+ 
Sbjct: 91  LEVESSDTIDNVKAKIQDKEGILPDQQSLIFAGKQLGDGRNLADYNIQKESTILGTSFIR 150

Query: 57  QNL-SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKED 115
             L S+M +FV   T +  T+V A    T+ ++K  IQ K+GI   +  L++ GK L ED
Sbjct: 151 VRLTSDMLIFVITLTGEAITLVVAT-SDTIYDVKAKIQGKKGIPPFRQRLIFAGKQL-ED 208

Query: 116 TATMTSMNIKSESIIHLVFC 135
              +   NI+  S +H+VFC
Sbjct: 209 RRNLAYYNIQKWSTLHVVFC 228


>gi|1326022|emb|CAA25706.1| unnamed protein product [Saccharomyces cerevisiae]
          Length = 191

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/181 (39%), Positives = 107/181 (59%), Gaps = 6/181 (3%)

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 5   LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 64

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 65  KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 124

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAG +L +   L+ YNIQK STLH+V
Sbjct: 125 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGNQLEDGRTLSDYNIQKESTLHLV 184

Query: 356 L 356
           L
Sbjct: 185 L 185



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/185 (40%), Positives = 109/185 (58%), Gaps = 3/185 (1%)

Query: 25  DICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYH 83
           D   L FAG +LE GR L DY I+  STLH + +    M++FVK  T +T T +E     
Sbjct: 1   DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT-LEVESSD 59

Query: 84  TVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIF 143
           T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV   +  + IF
Sbjct: 60  TIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIF 118

Query: 144 VKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDE 203
           VK  TG+ + LEV+ S  I +VK+ +    G+      +I+ G +LED +TL+ Y+++ E
Sbjct: 119 VKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGNQLEDGRTLSDYNIQKE 178

Query: 204 CLLEM 208
             L +
Sbjct: 179 STLHL 183



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 63/182 (34%), Positives = 101/182 (55%), Gaps = 4/182 (2%)

Query: 101 DQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSF 160
           DQ  L++ GK L ED  T++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S 
Sbjct: 1   DQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD 59

Query: 161 AIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFV 217
            I +VK+ +    G+      +I+ GK+LED +TL+ Y+++ E  L +       +QIFV
Sbjct: 60  TIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 119

Query: 218 RTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNY 277
           +T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y I+   
Sbjct: 120 KTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGNQLEDGRTLSDYNIQKES 179

Query: 278 VL 279
            L
Sbjct: 180 TL 181



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 66/183 (36%), Positives = 96/183 (52%), Gaps = 9/183 (4%)

Query: 253 QDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQ 309
           Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ 
Sbjct: 3   QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 62

Query: 310 DVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIF 369
           +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +       
Sbjct: 63  NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 122

Query: 370 IDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVV 423
              +I+L +  S+  +  K K Q         + L+     L+D RTL+DY +     + 
Sbjct: 123 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGNQLEDGRTLSDYNIQKESTLH 182

Query: 424 LVF 426
           LV 
Sbjct: 183 LVL 185



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 59/135 (43%), Positives = 82/135 (60%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 53  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 112

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ G  L ED  T+
Sbjct: 113 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGNQL-EDGRTL 170

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 171 SDYNIQKESTLHLVL 185


>gi|254540256|gb|ACT66230.1| polyubiquitin protein [Piriformospora indica]
          Length = 196

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/188 (40%), Positives = 109/188 (57%), Gaps = 3/188 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ + N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 6   LEVESSDTMDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 65

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 66  GGMQIFVKTLTGKTITL-EVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 123

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 124 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQ 183

Query: 180 HIMIYEGK 187
             +I+ G+
Sbjct: 184 QRLIFAGQ 191



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 103/187 (55%), Gaps = 4/187 (2%)

Query: 76  VVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFC 135
            +E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV  
Sbjct: 5   TLEVESSDTMDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLR 63

Query: 136 PKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTL 195
            +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+LED +TL
Sbjct: 64  LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTL 123

Query: 196 AFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGN 252
           + Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    
Sbjct: 124 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQ 183

Query: 253 QDLFYAG 259
           Q L +AG
Sbjct: 184 QRLIFAG 190



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/188 (34%), Positives = 104/188 (55%), Gaps = 6/188 (3%)

Query: 152 VNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM--- 208
           + LEV+ S  + +VK  +    G+      +I+ GK+LED +TL+ Y+++ E  L +   
Sbjct: 4   ITLEVESSDTMDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 63

Query: 209 FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTL 268
               +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL
Sbjct: 64  LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTL 123

Query: 269 ASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHL 325
           + Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   
Sbjct: 124 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQ 183

Query: 326 QSIVFAGK 333
           Q ++FAG+
Sbjct: 184 QRLIFAGQ 191



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/171 (36%), Positives = 92/171 (53%), Gaps = 3/171 (1%)

Query: 225 VRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV--- 281
           + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   
Sbjct: 4   ITLEVESSDTMDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 63

Query: 282 LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVL 341
           L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L
Sbjct: 64  LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTL 123

Query: 342 ARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ 392
           + YNIQK STLH+VL     +          +I+L +  S+  +  K K Q
Sbjct: 124 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQ 174



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 70/137 (51%), Gaps = 6/137 (4%)

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           + ITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 2   RGITLEVESSDTMDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 61

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 62  LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR 121

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 122 TLSDYNIQKESTLHLVL 138


>gi|90076064|dbj|BAE87712.1| unnamed protein product [Macaca fascicularis]
          Length = 210

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/190 (40%), Positives = 113/190 (59%), Gaps = 4/190 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++ + S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEAEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSI-FVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAA 178
           +  NI+ ES +HLV   +   ++ +VK  TG+ + LEV+ S  I +VKA +    G+   
Sbjct: 133 SDYNIQKESTLHLVLRLRGGDAVSYVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD 192

Query: 179 DHIMIYEGKK 188
              +I+ GK+
Sbjct: 193 QQRLIFAGKQ 202



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 114/202 (56%), Gaps = 7/202 (3%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LE + S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEAEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKN----NYVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVK 312
           +AG +LE  +TL+ Y I+     + VL +       +VKT  GKTITL+V+P +T+++VK
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGDAVSYVKTLTGKTITLEVEPSDTIENVK 180

Query: 313 VKLFDKLQTPLHLQSIVFAGKR 334
            K+ DK   P   Q ++FAGK+
Sbjct: 181 AKIQDKEGIPPDQQRLIFAGKQ 202



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/202 (36%), Positives = 114/202 (56%), Gaps = 6/202 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ EA P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EAEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDEC----LLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRD 237
           +I+ GK+LED +TL+ Y+++ E     +L +       +V+T   + + LEVE    + +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGDAVSYVKTLTGKTITLEVEPSDTIEN 178

Query: 238 VKEIVANIIDLSLGNQDLFYAG 259
           VK  + +   +    Q L +AG
Sbjct: 179 VKAKIQDKEGIPPDQQRLIFAG 200



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 101/184 (54%), Gaps = 4/184 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LE E    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEAEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLA-PSSRIIELPLIFIDPSISLSISISEVKEMAK 388
           FAGK+L +   L+ YNIQK STLH+VL       +         +I+L +  S+  E  K
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGDAVSYVKTLTGKTITLEVEPSDTIENVK 180

Query: 389 VKFQ 392
            K Q
Sbjct: 181 AKIQ 184



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 79/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+ +P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEAEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|313215765|emb|CBY16339.1| unnamed protein product [Oikopleura dioica]
          Length = 188

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 75/168 (44%), Positives = 104/168 (61%), Gaps = 3/168 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKA 167
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 180



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 70/181 (38%), Positives = 106/181 (58%), Gaps = 5/181 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 K 239
           K
Sbjct: 179 K 179



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/185 (36%), Positives = 106/185 (57%), Gaps = 6/185 (3%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 180

Query: 314 KLFDK 318
           K+ DK
Sbjct: 181 KIQDK 185



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 68/183 (37%), Positives = 101/183 (55%), Gaps = 3/183 (1%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 180

Query: 390 KFQ 392
           K Q
Sbjct: 181 KIQ 183



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 79/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|82568440|dbj|BAE48510.1| polyubiquitin [Raphidiophrys contractilis]
          Length = 173

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/168 (44%), Positives = 105/168 (62%), Gaps = 3/168 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 8   LEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 67

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     +++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 68  GGMQIFVKTLTGKTITL-EVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 125

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKA 167
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S +I +VKA
Sbjct: 126 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKA 173



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/173 (37%), Positives = 101/173 (58%), Gaps = 5/173 (2%)

Query: 70  TNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESI 129
           T +T T+ E     +++N+K  IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES 
Sbjct: 2   TGKTITL-EVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKEST 59

Query: 130 IHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKL 189
           +HLV   +  + IFVK  TG+ + LEV+ S +I +VKA +    G+      +I+ GK+L
Sbjct: 60  LHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQL 119

Query: 190 EDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVK 239
           ED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +VK
Sbjct: 120 EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVK 172



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 98/172 (56%), Gaps = 6/172 (3%)

Query: 148 TGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLE 207
           TG+ + LEV+ S +I +VKA +    G+      +I+ GK+LED +TL+ Y+++ E  L 
Sbjct: 2   TGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 61

Query: 208 M---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEA 264
           +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE 
Sbjct: 62  LVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLED 121

Query: 265 CKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
            +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +++++VK 
Sbjct: 122 GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKA 173



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 55/135 (40%), Positives = 81/135 (60%), Gaps = 3/135 (2%)

Query: 225 VRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV--- 281
           + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   
Sbjct: 6   ITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 65

Query: 282 LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVL 341
           L    QIFVKT  GKTITL+V+  +++++VK K+ DK   P   Q ++FAGK+L +   L
Sbjct: 66  LRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 125

Query: 342 ARYNIQKHSTLHMVL 356
           + YNIQK STLH+VL
Sbjct: 126 SDYNIQKESTLHLVL 140



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 73/138 (52%), Gaps = 6/138 (4%)

Query: 295 GKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHM 354
           GKTITL+V+  +++++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+
Sbjct: 3   GKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 62

Query: 355 VLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDD 408
           VL     +          +I+L +  S+  E  K K Q         + L+     L+D 
Sbjct: 63  VLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 122

Query: 409 RTLADYGMDLSEKVVLVF 426
           RTL+DY +     + LV 
Sbjct: 123 RTLSDYNIQKESTLHLVL 140


>gi|10121776|gb|AAG13367.1| polyprotein [bovine viral diarrhea virus type 2]
          Length = 636

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 77/202 (38%), Positives = 116/202 (57%), Gaps = 3/202 (1%)

Query: 9   IKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVK 67
           + +L+ +  V  GI  D   L FAG +LE GR L DY I+  STLH + +    M++FVK
Sbjct: 301 VGDLEHLGWVLRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVK 360

Query: 68  IPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSE 127
             T +T T+ E  P  T++N+K  IQ KEGI  DQ  L+  GK L ED  T+++  I+ E
Sbjct: 361 TLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLILAGKQL-EDGRTLSAYKIQKE 418

Query: 128 SIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGK 187
           S ++L    +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+   
Sbjct: 419 STLYLGLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPGQKRLIFPAN 478

Query: 188 KLEDSKTLAFYDMKDECLLEMF 209
           K ED++TL+ Y+++ E  L +F
Sbjct: 479 KREDARTLSDYNIQKESTLHLF 500



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 69/201 (34%), Positives = 113/201 (56%), Gaps = 6/201 (2%)

Query: 162 IRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVR 218
           + D++ +   + G+      +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+
Sbjct: 301 VGDLEHLGWVLRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVK 360

Query: 219 TPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYV 278
           T   + + LEVE    + +VK  + +   +    Q L  AG +LE  +TL++Y I+    
Sbjct: 361 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLILAGKQLEDGRTLSAYKIQKEST 420

Query: 279 LDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRL 335
           L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   + ++F   + 
Sbjct: 421 LYLGLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPGQKRLIFPANKR 480

Query: 336 FENHVLARYNIQKHSTLHMVL 356
            +   L+ YNIQK STLH+ L
Sbjct: 481 EDARTLSDYNIQKESTLHLFL 501



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 69/214 (32%), Positives = 111/214 (51%), Gaps = 11/214 (5%)

Query: 85  VQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFV 144
           V +++ +  V  GI  DQ  L++ GK L ED  T++  NI+ ES +HLV   +  + IFV
Sbjct: 301 VGDLEHLGWVLRGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 359

Query: 145 KAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDEC 204
           K  TG+ + LEV+ S  I +VKA +    G+      +I  GK+LED +TL+ Y ++ E 
Sbjct: 360 KTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLILAGKQLEDGRTLSAYKIQKES 419

Query: 205 LLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTK 261
            L +       +QIFV+T   + + LEVE    + +VK  + +   +  G + L +   K
Sbjct: 420 TLYLGLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPGQKRLIFPANK 479

Query: 262 LEACKTLASYGIKNNYVLDVLPSPFQIFVKTWGG 295
            E  +TL+ Y I+         S   +F++  GG
Sbjct: 480 REDARTLSDYNIQKE-------STLHLFLRLRGG 506



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 62/172 (36%), Positives = 90/172 (52%), Gaps = 9/172 (5%)

Query: 252 NQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTV 308
            Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+
Sbjct: 318 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTI 377

Query: 309 QDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLI 368
           ++VK K+ DK   P   Q ++ AGK+L +   L+ Y IQK STL++ L     +      
Sbjct: 378 ENVKAKIQDKEGIPPDQQRLILAGKQLEDGRTLSAYKIQKESTLYLGLRLRGGMQIFVKT 437

Query: 369 FIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADY 414
               +I+L +  S+  E  K K Q         K L+      +D RTL+DY
Sbjct: 438 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPGQKRLIFPANKREDARTLSDY 489



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/133 (40%), Positives = 78/133 (58%), Gaps = 3/133 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L  AG +LE GR L  Y I+  STL+   +  
Sbjct: 369 LEVEPSDTIENVKAKIQDKEGIPPDQQRLILAGKQLEDGRTLSAYKIQKESTLYLGLRLR 428

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI   Q  L++     +ED  T+
Sbjct: 429 GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPGQKRLIFPAN-KREDARTL 486

Query: 120 TSMNIKSESIIHL 132
           +  NI+ ES +HL
Sbjct: 487 SDYNIQKESTLHL 499


>gi|115187323|gb|ABI84246.1| polyubiquitin 10 [Arachis hypogaea]
          Length = 192

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 76/176 (43%), Positives = 104/176 (59%), Gaps = 3/176 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGV 175
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGI 188



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 71/189 (37%), Positives = 106/189 (56%), Gaps = 6/189 (3%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTP 322
           K+ DK   P
Sbjct: 181 KIQDKEGIP 189



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/181 (39%), Positives = 104/181 (57%), Gaps = 5/181 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 K 239
           K
Sbjct: 179 K 179



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/183 (37%), Positives = 100/183 (54%), Gaps = 3/183 (1%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 390 KFQ 392
           K Q
Sbjct: 181 KIQ 183



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 78/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  +  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTLADY +     + LV 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVL 147



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/103 (45%), Positives = 62/103 (60%), Gaps = 2/103 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQ 102
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ
Sbjct: 151 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQ 192


>gi|169635149|gb|ACA58351.1| ubiquitin-like protein [Sandersonia aurantiaca]
          Length = 189

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 76/176 (43%), Positives = 104/176 (59%), Gaps = 3/176 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGV 175
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGI 188



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 71/189 (37%), Positives = 106/189 (56%), Gaps = 6/189 (3%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTP 322
           K+ DK   P
Sbjct: 181 KIQDKEGIP 189



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/181 (39%), Positives = 104/181 (57%), Gaps = 5/181 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 K 239
           K
Sbjct: 179 K 179



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/183 (37%), Positives = 100/183 (54%), Gaps = 3/183 (1%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 390 KFQ 392
           K Q
Sbjct: 181 KIQ 183



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 78/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  +  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTLADY +     + LV 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVL 147


>gi|357151131|ref|XP_003575690.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin 4-like [Brachypodium
           distachyon]
          Length = 380

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 102/331 (30%), Positives = 166/331 (50%), Gaps = 25/331 (7%)

Query: 41  LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQS 100
           L DY I + STL    +    M+++V          +E     T+  +K+ IQVKEG   
Sbjct: 57  LADYNIEHGSTLDLQEK----MQIYVMRRKQGRTITLEVDSLDTIDEVKSKIQVKEGFPK 112

Query: 101 DQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSF 160
            Q  L++  K L++   T+   NI  ES I LV     +  IFV+   G  + L V+ + 
Sbjct: 113 GQQCLIFGNKQLEDGELTLADHNIWKESTILLV-----LKXIFVQTMRGGTITLNVESTD 167

Query: 161 AIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKD------ECLLEMFPSSIQ 214
            + DVK  +    G       +I+ GK++ED +TLA Y++++      +  L+    ++Q
Sbjct: 168 TVNDVKVKIYEKDGTRPIQQRLIFCGKQMEDDRTLADYNIENGRTLDVKLKLQGGRYAMQ 227

Query: 215 IFV-RTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACK-TLASYG 272
           I+V  T     + LEV+ L  + +VK  +          Q L +   +L+  K TLA + 
Sbjct: 228 IYVMETRARWTIALEVDSLDTIDEVKSKIQVKEGFPKVQQCLIFDNKQLDDGKFTLADHN 287

Query: 273 I-KNNYVLDVL--PSP-----FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLH 324
           I + + +L VL  PSP      +I V+T  GK I LDV+  +TV DVK+K+++K  T   
Sbjct: 288 IWRESTILLVLLQPSPTRGTTMRICVRTMDGKEIPLDVESSDTVDDVKMKIYEKDGTRPV 347

Query: 325 LQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
            Q ++  G RL +++ LA Y I+K S +++V
Sbjct: 348 QQRLIHEGIRLLDDYTLADYEIEKGSIIYVV 378



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 92/318 (28%), Positives = 147/318 (46%), Gaps = 27/318 (8%)

Query: 118 TMTSMNIKSESIIHLVFCPKEILSIFV-KAATGEIVNLEVKHSFAIRDVKAIVGSVVGVS 176
           T+   NI+  S + L    +E + I+V +   G  + LEV     I +VK+ +    G  
Sbjct: 56  TLADYNIEHGSTLDL----QEKMQIYVMRRKQGRTITLEVDSLDTIDEVKSKIQVKEGFP 111

Query: 177 AADHIMIYEGKKLEDSK-TLAFYDMKDECLLEMFPSSIQIFVRTPIEEIVRLEVEVLIVV 235
                +I+  K+LED + TLA +++  E  + +    I  FV+T     + L VE    V
Sbjct: 112 KGQQCLIFGNKQLEDGELTLADHNIWKESTILLVLKXI--FVQTMRGGTITLNVESTDTV 169

Query: 236 RDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVL------PSPFQIF 289
            DVK  +          Q L + G ++E  +TLA Y I+N   LDV           QI+
Sbjct: 170 NDVKVKIYEKDGTRPIQQRLIFCGKQMEDDRTLADYNIENGRTLDVKLKLQGGRYAMQIY 229

Query: 290 V-KTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENH-VLARYNIQ 347
           V +T    TI L+V   +T+ +VK K+  K   P   Q ++F  K+L +    LA +NI 
Sbjct: 230 VMETRARWTIALEVDSLDTIDEVKSKIQVKEGFPKVQQCLIFDNKQLDDGKFTLADHNIW 289

Query: 348 KHSTLHMVL-APSS----------RIIELPLIFIDPSISLSISISEVKEMAKVKFQAAVK 396
           + ST+ +VL  PS           R ++   I +D   S ++   ++K   K   +   +
Sbjct: 290 RESTILLVLLQPSPTRGTTMRICVRTMDGKEIPLDVESSDTVDDVKMKIYEKDGTRPVQQ 349

Query: 397 ELLVDQVALQDDRTLADY 414
            L+ + + L DD TLADY
Sbjct: 350 RLIHEGIRLLDDYTLADY 367



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 124/247 (50%), Gaps = 18/247 (7%)

Query: 194 TLAFYDMKDECLLEMFPSSIQIFV-RTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGN 252
           TLA Y+++    L++    +QI+V R      + LEV+ L  + +VK  +        G 
Sbjct: 56  TLADYNIEHGSTLDL-QEKMQIYVMRRKQGRTITLEVDSLDTIDEVKSKIQVKEGFPKGQ 114

Query: 253 QDLFYAGTKLEACK-TLASYGI-KNNYVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQD 310
           Q L +   +LE  + TLA + I K + +L VL     IFV+T  G TITL+V+  +TV D
Sbjct: 115 QCLIFGNKQLEDGELTLADHNIWKESTILLVLKX---IFVQTMRGGTITLNVESTDTVND 171

Query: 311 VKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFI 370
           VKVK+++K  T    Q ++F GK++ ++  LA YNI+   TL + L        + +  +
Sbjct: 172 VKVKIYEKDGTRPIQQRLIFCGKQMEDDRTLADYNIENGRTLDVKLKLQGGRYAMQIYVM 231

Query: 371 DPSISLSI--------SISEVKEMAKVK--FQAAVKELLVDQVALQDDR-TLADYGMDLS 419
           +     +I        +I EVK   +VK  F    + L+ D   L D + TLAD+ +   
Sbjct: 232 ETRARWTIALEVDSLDTIDEVKSKIQVKEGFPKVQQCLIFDNKQLDDGKFTLADHNIWRE 291

Query: 420 EKVVLVF 426
             ++LV 
Sbjct: 292 STILLVL 298



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 9/210 (4%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHF---LH 56
           + V+ ++ + ++K  I+ K+G       L F G ++E  R L DY I N  TL     L 
Sbjct: 161 LNVESTDTVNDVKVKIYEKDGTRPIQQRLIFCGKQMEDDRTLADYNIENGRTLDVKLKLQ 220

Query: 57  QNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDT 116
                M+++V     +    +E     T+  +K+ IQVKEG    Q  L++D K L +  
Sbjct: 221 GGRYAMQIYVMETRARWTIALEVDSLDTIDEVKSKIQVKEGFPKVQQCLIFDNKQLDDGK 280

Query: 117 ATMTSMNIKSESIIHLVF---CPKE--ILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGS 171
            T+   NI  ES I LV     P     + I V+   G+ + L+V+ S  + DVK  +  
Sbjct: 281 FTLADHNIWRESTILLVLLQPSPTRGTTMRICVRTMDGKEIPLDVESSDTVDDVKMKIYE 340

Query: 172 VVGVSAADHIMIYEGKKLEDSKTLAFYDMK 201
             G       +I+EG +L D  TLA Y+++
Sbjct: 341 KDGTRPVQQRLIHEGIRLLDDYTLADYEIE 370


>gi|14250448|gb|AAH08661.1| Ubc protein [Mus musculus]
          Length = 202

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 73/167 (43%), Positives = 103/167 (61%), Gaps = 3/167 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVK 166
           +  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S   + VK
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVTTKKVK 179



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/182 (38%), Positives = 108/182 (59%), Gaps = 5/182 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE  +  + V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVTTKKV 178

Query: 239 KE 240
           K+
Sbjct: 179 KQ 180



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/147 (42%), Positives = 90/147 (61%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 67/179 (37%), Positives = 100/179 (55%), Gaps = 6/179 (3%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVK 312
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITLDV+P  T + VK
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVTTKKVK 179



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 80/147 (54%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|182407850|gb|ACB87916.1| polyubiquitin 1 [Malus x domestica]
          Length = 208

 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 109/187 (58%), Gaps = 3/187 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T ++ T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  ++
Sbjct: 75  GGMQIFVKTLTGESIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRSL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK+ TG+ + LEV+ S  I +V+A +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMHIFVKSLTGKTITLEVESSETIDNVQAKIQDKEGIPPDQ 192

Query: 180 HIMIYEG 186
             +I+ G
Sbjct: 193 QRLIFAG 199



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/199 (36%), Positives = 110/199 (55%), Gaps = 6/199 (3%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   E + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGESITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  ++LA Y I+    L +   L     IFVK+  GKTITL+V+   T+ +V+ 
Sbjct: 121 FAGKQLEDGRSLADYNIQKESTLHLVLRLRGGMHIFVKSLTGKTITLEVESSETIDNVQA 180

Query: 314 KLFDKLQTPLHLQSIVFAG 332
           K+ DK   P   Q ++FAG
Sbjct: 181 KIQDKEGIPPDQQRLIFAG 199



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/202 (36%), Positives = 112/202 (55%), Gaps = 5/202 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TGE + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGESITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED ++LA Y+++ E  L +       + IFV++   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRSLADYNIQKESTLHLVLRLRGGMHIFVKSLTGKTITLEVESSETIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGT 260
           +  + +   +    Q L +AGT
Sbjct: 179 QAKIQDKEGIPPDQQRLIFAGT 200



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 67/183 (36%), Positives = 100/183 (54%), Gaps = 3/183 (1%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  G++ITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGESITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  SE  +  + 
Sbjct: 121 FAGKQLEDGRSLADYNIQKESTLHLVLRLRGGMHIFVKSLTGKTITLEVESSETIDNVQA 180

Query: 390 KFQ 392
           K Q
Sbjct: 181 KIQ 183



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 78/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          SI+L +  S+  +  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGESITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D R+LADY +     + LV 
Sbjct: 121 FAGKQLEDGRSLADYNIQKESTLHLVL 147


>gi|399525602|gb|AFP44113.1| ubiquitin, partial [Lycoris longituba]
          Length = 187

 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 75/168 (44%), Positives = 101/168 (60%), Gaps = 3/168 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 18  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 77

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 78  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 135

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKA 167
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA
Sbjct: 136 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIDNVKA 183



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/181 (39%), Positives = 104/181 (57%), Gaps = 5/181 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 4   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 61

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 62  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 121

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 122 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIDNV 181

Query: 239 K 239
           K
Sbjct: 182 K 182



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 104/184 (56%), Gaps = 6/184 (3%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 4   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 63

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 64  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 123

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 124 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIDNVKA 183

Query: 314 KLFD 317
           K+ D
Sbjct: 184 KIQD 187



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 69/185 (37%), Positives = 100/185 (54%), Gaps = 3/185 (1%)

Query: 211 SSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLAS 270
             +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA 
Sbjct: 2   GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 61

Query: 271 YGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQS 327
           Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q 
Sbjct: 62  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 121

Query: 328 IVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMA 387
           ++FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +  
Sbjct: 122 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIDNV 181

Query: 388 KVKFQ 392
           K K Q
Sbjct: 182 KAKIQ 186



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 54/135 (40%), Positives = 74/135 (54%), Gaps = 6/135 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 4   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 63

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELL 399
           IQK STLH+VL     +          +I+L +  S+  +  K K Q         + L+
Sbjct: 64  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 123

Query: 400 VDQVALQDDRTLADY 414
                L+D RTLADY
Sbjct: 124 FAGKQLEDGRTLADY 138


>gi|71534894|gb|AAZ32851.1| pentameric polyubiquitin [Medicago sativa]
          Length = 189

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/182 (40%), Positives = 105/182 (57%), Gaps = 5/182 (2%)

Query: 41  LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQS 100
           L DY I+  STLH + +    M++FVK  T +T T+ E     T+ N+K  IQ KEGI  
Sbjct: 2   LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPP 60

Query: 101 DQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSF 160
           DQ  L++ GK L ED  T+   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S 
Sbjct: 61  DQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD 119

Query: 161 AIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFV 217
            I +VKA +    G+      +I+ GK+LED +TLA Y+++ E  L +       +QIFV
Sbjct: 120 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFV 179

Query: 218 RT 219
           +T
Sbjct: 180 KT 181



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/189 (37%), Positives = 104/189 (55%), Gaps = 6/189 (3%)

Query: 118 TMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSA 177
           T+   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+  
Sbjct: 1   TLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPP 60

Query: 178 ADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIV 234
               +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    
Sbjct: 61  DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 120

Query: 235 VRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVK 291
           + +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVK
Sbjct: 121 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 180

Query: 292 TWGGKTITL 300
           T  GKTITL
Sbjct: 181 TLTGKTITL 189



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/169 (40%), Positives = 98/169 (57%), Gaps = 6/169 (3%)

Query: 194 TLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSL 250
           TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +  
Sbjct: 1   TLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPP 60

Query: 251 GNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNT 307
             Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T
Sbjct: 61  DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 120

Query: 308 VQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           + +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 121 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 169



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/155 (43%), Positives = 92/155 (59%), Gaps = 3/155 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 37  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 96

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 97  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 154

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNL 154
              NI+ ES +HLV   +  + IFVK  TG+ + L
Sbjct: 155 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL 189



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/169 (37%), Positives = 87/169 (51%), Gaps = 9/169 (5%)

Query: 267 TLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPL 323
           TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P 
Sbjct: 1   TLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPP 60

Query: 324 HLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEV 383
             Q ++FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+ 
Sbjct: 61  DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 120

Query: 384 KEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
            +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 121 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 169


>gi|400599610|gb|EJP67307.1| Ubiquitin subgroup [Beauveria bassiana ARSEF 2860]
          Length = 212

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 119/220 (54%), Gaps = 17/220 (7%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK+ +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLF 316
           +AG +LE  +TL+ Y I+         S   + ++  G       V+  +T+ +VK K+ 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKE-------STLHLVLRLRG-------VESSDTIDNVKSKIQ 166

Query: 317 DKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 167 DKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 206



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/209 (36%), Positives = 115/209 (55%), Gaps = 20/209 (9%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   + + S                 S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGVES-----------------SDTIDNVKSKIQDKEGIPPDQ 175

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 176 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 204



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 118/219 (53%), Gaps = 18/219 (8%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEMFPSSIQIFVRTPIEEIVRLE-VEVLIVVRDVKE 240
           +I+ GK+LED +TL+ Y+++ E  L +               ++RL  VE    + +VK 
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHL---------------VLRLRGVESSDTIDNVKS 163

Query: 241 IVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
            + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 164 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 202



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 76/221 (34%), Positives = 116/221 (52%), Gaps = 22/221 (9%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL                 +  S +I  VK  +K+
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLR-------------GVESSDTIDNVK--SKI 165

Query: 390 KFQAAV----KELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           + +  +    + L+     L+D RTL+DY +     + LV 
Sbjct: 166 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 206



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/54 (50%), Positives = 34/54 (62%), Gaps = 1/54 (1%)

Query: 3   VKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 152 VESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 205


>gi|92790176|emb|CAI83757.1| Polyubiqutin 4 [Polyplastron multivesiculatum]
          Length = 177

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 71/171 (41%), Positives = 102/171 (59%), Gaps = 6/171 (3%)

Query: 192 SKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDL 248
           ++TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +
Sbjct: 1   NRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGI 60

Query: 249 SLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPY 305
               Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+P 
Sbjct: 61  PPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPS 120

Query: 306 NTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           +T+ +VK K+ DK   P   Q ++FAGK+L +N  LA YNIQK STLH+VL
Sbjct: 121 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVL 171



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 69/168 (41%), Positives = 100/168 (59%), Gaps = 2/168 (1%)

Query: 41  LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQS 100
           L DY I+  STLH + +    M++FVK  T +T T+ E  P  T+ N+K  IQ KEGI  
Sbjct: 4   LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVEPSDTIDNVKAKIQDKEGIPP 62

Query: 101 DQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSF 160
           DQ  L++ GK L ED  T+   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S 
Sbjct: 63  DQQRLIFAGKQL-EDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 121

Query: 161 AIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
            I +VKA +    G+      +I+ GK+LED++TLA Y+++ E  L +
Sbjct: 122 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 169



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 65/170 (38%), Positives = 91/170 (53%), Gaps = 9/170 (5%)

Query: 266 KTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTP 322
           +TLA Y I+    L +   L    QIFVKT  GKTITL+V+P +T+ +VK K+ DK   P
Sbjct: 2   RTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIP 61

Query: 323 LHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISE 382
              Q ++FAGK+L +N  LA YNIQK STLH+VL     +          +I+L +  S+
Sbjct: 62  PDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 121

Query: 383 VKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
             +  K K Q         + L+     L+D+RTLADY +     + LV 
Sbjct: 122 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVL 171



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 81/135 (60%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE  R L DY I+  STLH + +  
Sbjct: 39  LEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLR 98

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 99  GGMQIFVKTLTGKTIT-LEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTL 156

Query: 120 TSMNIKSESIIHLVF 134
              NI+ ES +HLV 
Sbjct: 157 ADYNIQKESTLHLVL 171



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/165 (35%), Positives = 91/165 (55%), Gaps = 3/165 (1%)

Query: 118 TMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSA 177
           T+   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+  
Sbjct: 3   TLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPP 62

Query: 178 ADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIV 234
               +I+ GK+LED++TLA Y+++ E  L +       +QIFV+T   + + LEVE    
Sbjct: 63  DQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 122

Query: 235 VRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           + +VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 123 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTL 167


>gi|197129059|gb|ACH45557.1| putative ubiquitin C variant 4 [Taeniopygia guttata]
          Length = 190

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/168 (43%), Positives = 102/168 (60%), Gaps = 3/168 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKA 167
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I   + 
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIEXCQG 180



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 69/172 (40%), Positives = 103/172 (59%), Gaps = 5/172 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVE 230
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 170



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/147 (42%), Positives = 90/147 (61%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/176 (36%), Positives = 100/176 (56%), Gaps = 6/176 (3%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQ 309
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T++
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 176



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 80/147 (54%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|348537407|ref|XP_003456186.1| PREDICTED: polyubiquitin-C-like [Oreochromis niloticus]
          Length = 237

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/236 (35%), Positives = 119/236 (50%), Gaps = 49/236 (20%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-------------------- 40
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR                    
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLFAG 74

Query: 41  --------LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMI 92
                   L DY I+  STLH + +    M++FVK  T +T T +E  P  T++N+K  I
Sbjct: 75  KQLEDGRTLSDYNIQKESTLHLVLRLRENMQIFVKTLTGKTIT-LEVEPSDTIENVKAKI 133

Query: 93  QVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIV 152
           Q KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV   +  + IFVK  TG+ +
Sbjct: 134 QDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 192

Query: 153 NLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
            LEV+ S                   D I    GK+LED +TL+ Y+++ E  L +
Sbjct: 193 TLEVEPS-------------------DTIENXAGKQLEDGRTLSDYNIQKESTLHL 229



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 122/250 (48%), Gaps = 52/250 (20%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM------------------------------FPSSIQIFVRTPIEEIVRLEV 229
           ++ E  L +                                 ++QIFV+T   + + LEV
Sbjct: 61  IQKESTLHLVLFAGKQLEDGRTLSDYNIQKESTLHLVLRLRENMQIFVKTLTGKTITLEV 120

Query: 230 EVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPF 286
           E    + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    
Sbjct: 121 EPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 180

Query: 287 QIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNI 346
           QIFVKT  GKTITL+V+P +T+++                    AGK+L +   L+ YNI
Sbjct: 181 QIFVKTLTGKTITLEVEPSDTIENX-------------------AGKQLEDGRTLSDYNI 221

Query: 347 QKHSTLHMVL 356
           QK STLH+VL
Sbjct: 222 QKESTLHLVL 231



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 120/247 (48%), Gaps = 49/247 (19%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLK-------- 113
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L+        
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 114 ------------------EDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLE 155
                             ED  T++  NI+ ES +HLV   +E + IFVK  TG+ + LE
Sbjct: 60  NIQKESTLHLVLFAGKQLEDGRTLSDYNIQKESTLHLVLRLRENMQIFVKTLTGKTITLE 119

Query: 156 VKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSS 212
           V+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+++ E  L +       
Sbjct: 120 VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 179

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +                    AG +LE  +TL+ Y 
Sbjct: 180 MQIFVKTLTGKTITLEVEPSDTIENX-------------------AGKQLEDGRTLSDYN 220

Query: 273 IKNNYVL 279
           I+    L
Sbjct: 221 IQKESTL 227



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/244 (31%), Positives = 119/244 (48%), Gaps = 43/244 (17%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV------------------------------LPSPFQIFVKTWGGKTITLDV 302
           I+    L +                              L    QIFVKT  GKTITL+V
Sbjct: 61  IQKESTLHLVLFAGKQLEDGRTLSDYNIQKESTLHLVLRLRENMQIFVKTLTGKTITLEV 120

Query: 303 QPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRI 362
           +P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL    R+
Sbjct: 121 EPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL----RL 176

Query: 363 IELPLIFIDPSISLSISISEVKEMAKVKFQAAVKELLVDQVALQDDRTLADYGMDLSEKV 422
                IF+      +I++ EV+    ++  A  +        L+D RTL+DY +     +
Sbjct: 177 RGGMQIFVKTLTGKTITL-EVEPSDTIENXAGKQ--------LEDGRTLSDYNIQKESTL 227

Query: 423 VLVF 426
            LV 
Sbjct: 228 HLVL 231


>gi|75858833|gb|ABA28993.1| polyubiquitin [Symbiodinium sp. C3]
          Length = 176

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/163 (44%), Positives = 102/163 (62%), Gaps = 3/163 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDSIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  +++N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDSIENVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAI 162
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S +I
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSI 175



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 68/172 (39%), Positives = 104/172 (60%), Gaps = 5/172 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  +++N+KT IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDSIENVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S +I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKTKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVE 230
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 170



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 90/147 (61%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDSIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +++++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKTKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 100/176 (56%), Gaps = 6/176 (3%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S +I +VK  +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDSIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKTKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQ 309
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P ++++
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIE 176



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 80/147 (54%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +++++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDSIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKTKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|357498827|ref|XP_003619702.1| Ubiquitin-like protein [Medicago truncatula]
 gi|355494717|gb|AES75920.1| Ubiquitin-like protein [Medicago truncatula]
          Length = 245

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/176 (43%), Positives = 104/176 (59%), Gaps = 3/176 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 66  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 125

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 126 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 183

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGV 175
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+
Sbjct: 184 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGI 239



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/189 (37%), Positives = 106/189 (56%), Gaps = 6/189 (3%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 52  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 111

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 112 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 171

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 172 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 231

Query: 314 KLFDKLQTP 322
           K+ DK   P
Sbjct: 232 KIQDKEGIP 240



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 71/182 (39%), Positives = 105/182 (57%), Gaps = 5/182 (2%)

Query: 61  EMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMT 120
           +M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+ 
Sbjct: 51  KMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLA 108

Query: 121 SMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADH 180
             NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+     
Sbjct: 109 DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ 168

Query: 181 IMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRD 237
            +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +
Sbjct: 169 RLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDN 228

Query: 238 VK 239
           VK
Sbjct: 229 VK 230



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 101/187 (54%), Gaps = 3/187 (1%)

Query: 209 FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTL 268
           F   +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL
Sbjct: 48  FQFKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 107

Query: 269 ASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHL 325
           A Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   
Sbjct: 108 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 167

Query: 326 QSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKE 385
           Q ++FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +
Sbjct: 168 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 227

Query: 386 MAKVKFQ 392
             K K Q
Sbjct: 228 NVKAKIQ 234



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 93/190 (48%), Gaps = 14/190 (7%)

Query: 243 ANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVLPSPFQIFVKTWGGKTITLDV 302
           A I+ LS+ N      GT   +C  L S   +  +         QIFVKT  GKTITL+V
Sbjct: 17  AQIVCLSIPN------GTLTMSCILLRSIQTRTQH--RSFQFKMQIFVKTLTGKTITLEV 68

Query: 303 QPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRI 362
           +  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +
Sbjct: 69  ESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 128

Query: 363 IELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGM 416
                     +I+L +  S+  +  K K Q         + L+     L+D RTLADY +
Sbjct: 129 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 188

Query: 417 DLSEKVVLVF 426
                + LV 
Sbjct: 189 QKESTLHLVL 198


>gi|408776165|gb|AFU90137.1| polyubiquitin, partial [Paeonia lactiflora]
          Length = 169

 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 74/163 (45%), Positives = 97/163 (59%), Gaps = 3/163 (1%)

Query: 6   SEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKL 64
           S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +    M++
Sbjct: 1   SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQI 60

Query: 65  FVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNI 124
           FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI
Sbjct: 61  FVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNI 118

Query: 125 KSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKA 167
           + ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA
Sbjct: 119 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 161



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 63/159 (39%), Positives = 92/159 (57%), Gaps = 4/159 (2%)

Query: 84  TVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIF 143
           T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +  + IF
Sbjct: 3   TIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIF 61

Query: 144 VKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDE 203
           VK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+++ E
Sbjct: 62  VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 121

Query: 204 CLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVK 239
             L +       +QIFV+T   + + LEVE    + +VK
Sbjct: 122 STLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 160



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 80/143 (55%), Gaps = 3/143 (2%)

Query: 253 QDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQ 309
           Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ 
Sbjct: 22  QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 81

Query: 310 DVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIF 369
           +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +       
Sbjct: 82  NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 141

Query: 370 IDPSISLSISISEVKEMAKVKFQ 392
              +I+L +  S+  +  K K Q
Sbjct: 142 TGKTITLEVESSDTIDNVKAKIQ 164



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/167 (36%), Positives = 93/167 (55%), Gaps = 6/167 (3%)

Query: 159 SFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQI 215
           S  I +VKA +    G+      +I+ GK+LED +TLA Y+++ E  L +       +QI
Sbjct: 1   SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQI 60

Query: 216 FVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKN 275
           FV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y I+ 
Sbjct: 61  FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 120

Query: 276 NYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKL 319
              L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK+
Sbjct: 121 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKM 167



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 42/96 (43%), Positives = 57/96 (59%), Gaps = 2/96 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 72  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 131

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVK 95
             M++FVK  T +T T +E     T+ N+K  IQ K
Sbjct: 132 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDK 166



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 6/127 (4%)

Query: 306 NTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIEL 365
           +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +   
Sbjct: 2   DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIF 61

Query: 366 PLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLS 419
                  +I+L +  S+  +  K K Q         + L+     L+D RTLADY +   
Sbjct: 62  VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 121

Query: 420 EKVVLVF 426
             + LV 
Sbjct: 122 STLHLVL 128


>gi|395536787|ref|XP_003770393.1| PREDICTED: polyubiquitin-C-like, partial [Sarcophilus harrisii]
          Length = 243

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 71/158 (44%), Positives = 99/158 (62%), Gaps = 3/158 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 68  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 127

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 128 GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 185

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVK 157
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+
Sbjct: 186 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 223



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 63/166 (37%), Positives = 97/166 (58%), Gaps = 4/166 (2%)

Query: 76  VVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFC 135
            +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV  
Sbjct: 67  TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLR 125

Query: 136 PKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTL 195
            +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL
Sbjct: 126 LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 185

Query: 196 AFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           + Y+++ E  L +       +QIFV+T   + + LEVE   +V ++
Sbjct: 186 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPXDIVENI 231



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 57/135 (42%), Positives = 82/135 (60%), Gaps = 3/135 (2%)

Query: 225 VRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV--- 281
           + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   
Sbjct: 66  ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 125

Query: 282 LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVL 341
           L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L
Sbjct: 126 LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 185

Query: 342 ARYNIQKHSTLHMVL 356
           + YNIQK STLH+VL
Sbjct: 186 SDYNIQKESTLHLVL 200



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/170 (35%), Positives = 96/170 (56%), Gaps = 6/170 (3%)

Query: 152 VNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM--- 208
           + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+++ E  L +   
Sbjct: 66  ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 125

Query: 209 FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTL 268
               +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL
Sbjct: 126 LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 185

Query: 269 ASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKL 315
           + Y I+    L +   L    QIFVKT  GKTITL+V+P + V+++ V+L
Sbjct: 186 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPXDIVENILVQL 235



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 71/135 (52%), Gaps = 6/135 (4%)

Query: 298 ITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLA 357
           ITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL 
Sbjct: 66  ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 125

Query: 358 PSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTL 411
               +          +I+L +  S+  E  K K Q         + L+     L+D RTL
Sbjct: 126 LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 185

Query: 412 ADYGMDLSEKVVLVF 426
           +DY +     + LV 
Sbjct: 186 SDYNIQKESTLHLVL 200


>gi|254802948|gb|ACT82769.1| polyubiquitin [Nicotiana tabacum]
          Length = 188

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 72/182 (39%), Positives = 105/182 (57%), Gaps = 5/182 (2%)

Query: 41  LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQS 100
           L DY I+  STLH + +    +++FVK  T +T T+ E     T+ N+K  IQ KEGI  
Sbjct: 2   LPDYNIQKESTLHLVLRLRGGLQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPP 60

Query: 101 DQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSF 160
           DQ  L++ GK L ED  T+   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S 
Sbjct: 61  DQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD 119

Query: 161 AIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFV 217
            I +VKA +    G+      +I+ GK+LED +TLA Y+++ E  L +       +QIFV
Sbjct: 120 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFV 179

Query: 218 RT 219
           +T
Sbjct: 180 KT 181



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/188 (37%), Positives = 103/188 (54%), Gaps = 6/188 (3%)

Query: 118 TMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSA 177
           T+   NI+ ES +HLV   +  L IFVK  TG+ + LEV+ S  I +VKA +    G+  
Sbjct: 1   TLPDYNIQKESTLHLVLRLRGGLQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPP 60

Query: 178 ADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIV 234
               +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    
Sbjct: 61  DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 120

Query: 235 VRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVK 291
           + +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVK
Sbjct: 121 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 180

Query: 292 TWGGKTIT 299
           T  GKTIT
Sbjct: 181 TLTGKTIT 188



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 68/169 (40%), Positives = 97/169 (57%), Gaps = 6/169 (3%)

Query: 194 TLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSL 250
           TL  Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +  
Sbjct: 1   TLPDYNIQKESTLHLVLRLRGGLQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPP 60

Query: 251 GNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNT 307
             Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T
Sbjct: 61  DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 120

Query: 308 VQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           + +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 121 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 169



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 67/153 (43%), Positives = 91/153 (59%), Gaps = 3/153 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 37  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 96

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 97  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 154

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIV 152
              NI+ ES +HLV   +  + IFVK  TG+ +
Sbjct: 155 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 187



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 86/169 (50%), Gaps = 9/169 (5%)

Query: 267 TLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPL 323
           TL  Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P 
Sbjct: 1   TLPDYNIQKESTLHLVLRLRGGLQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPP 60

Query: 324 HLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEV 383
             Q ++FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+ 
Sbjct: 61  DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 120

Query: 384 KEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
            +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 121 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 169



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/76 (46%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 113 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 172

Query: 60  SEMKLFVKIPTNQTAT 75
             M++FVK  T +T T
Sbjct: 173 GGMQIFVKTLTGKTIT 188


>gi|343485961|dbj|BAK61738.1| ubiquitin [Larcopyle butschlii]
          Length = 188

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 74/176 (42%), Positives = 103/176 (58%), Gaps = 3/176 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDVESSDTISNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ +     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-DVESSDTISNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGV 175
              NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTISNVKAKIQDKEGI 188



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/185 (37%), Positives = 105/185 (56%), Gaps = 6/185 (3%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + L+V+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLDVESSDTISNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + L+VE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTISNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITLDV+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTISNVKA 180

Query: 314 KLFDK 318
           K+ DK
Sbjct: 181 KIQDK 185



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 69/183 (37%), Positives = 99/183 (54%), Gaps = 3/183 (1%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + L+VE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLDVESSDTISNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITLDV+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTISNVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+     K 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTISNVKA 180

Query: 390 KFQ 392
           K Q
Sbjct: 181 KIQ 183



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/181 (37%), Positives = 104/181 (57%), Gaps = 5/181 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-DVESSDTISNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTISNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + L+VE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTISNV 178

Query: 239 K 239
           K
Sbjct: 179 K 179



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 77/147 (52%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITLDV+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLDVESSDTISNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELL 399
           IQK STLH+VL     +          +I+L +  S+     K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTISNVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTLADY +     + LV 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVL 147


>gi|149391401|gb|ABR25718.1| polyubiquitin containing 7 ubiquitin monomers [Oryza sativa Indica
           Group]
          Length = 178

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 70/172 (40%), Positives = 100/172 (58%), Gaps = 6/172 (3%)

Query: 191 DSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIID 247
           D +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   
Sbjct: 1   DGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEG 60

Query: 248 LSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQP 304
           +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+ 
Sbjct: 61  IPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVES 120

Query: 305 YNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
            +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 121 SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 172



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 70/171 (40%), Positives = 100/171 (58%), Gaps = 3/171 (1%)

Query: 39  GR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEG 97
           GR L DY I+  STLH + +    M++FVK  T +T T+ E     T+ N+K  IQ KEG
Sbjct: 2   GRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEG 60

Query: 98  IQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVK 157
           I  DQ  L++ GK L ED  T+   NI+ ES +HLV   +  + IFVK  TG+ + LEV+
Sbjct: 61  IPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 119

Query: 158 HSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
            S  I +VKA +    G+      +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 120 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 170



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/168 (35%), Positives = 91/168 (54%), Gaps = 3/168 (1%)

Query: 115 DTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVG 174
           D  T+   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G
Sbjct: 1   DGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEG 60

Query: 175 VSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEV 231
           +      +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE 
Sbjct: 61  IPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVES 120

Query: 232 LIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
              + +VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 121 SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 168



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 81/135 (60%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 40  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 99

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 100 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 157

Query: 120 TSMNIKSESIIHLVF 134
              NI+ ES +HLV 
Sbjct: 158 ADYNIQKESTLHLVL 172



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 63/171 (36%), Positives = 88/171 (51%), Gaps = 9/171 (5%)

Query: 265 CKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQT 321
            +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   
Sbjct: 2   GRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGI 61

Query: 322 PLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISIS 381
           P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S
Sbjct: 62  PPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESS 121

Query: 382 EVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           +  +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 122 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 172


>gi|353237461|emb|CCA69433.1| related to UBI4-Ubiquitin [Piriformospora indica DSM 11827]
          Length = 195

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/220 (35%), Positives = 112/220 (50%), Gaps = 34/220 (15%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK                 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK----------------- 103

Query: 257 YAGTKLEACKTLASYGIKNNYVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLF 316
                    K     GI  +          QIFVKT  GKTITL+V+  +T+ +VK K+ 
Sbjct: 104 --------TKIQDKEGIPPDQ------QRMQIFVKTLTGKTITLEVESSDTIDNVKTKIQ 149

Query: 317 DKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 150 DKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 189



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 104/218 (47%), Gaps = 33/218 (15%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEI 241
           M                               QIFV+T   + + LEVE    + +VK  
Sbjct: 119 M-------------------------------QIFVKTLTGKTITLEVESSDTIDNVKTK 147

Query: 242 VANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 148 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 185



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 84/176 (47%), Gaps = 43/176 (24%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATV-----------------VEAMP--------------------- 81
             M++FVK  T +T T+                  E +P                     
Sbjct: 75  GGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRMQIFVKTLTGKTITLE 134

Query: 82  ---YHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVF 134
                T+ N+KT IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV 
Sbjct: 135 VESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVL 189



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/107 (41%), Positives = 62/107 (57%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ 392
           IQK STLH+VL     +          +I+L +  S+  +  K K Q
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQ 107


>gi|182407854|gb|ACB87918.1| polyubiquitin 3 [Malus x domestica]
          Length = 188

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/176 (42%), Positives = 102/176 (57%), Gaps = 3/176 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 11  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 70

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 71  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 128

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGV 175
              NI+ ES +HLV   +  + +FVK  TG  + LEV+ S  I +VK  +    G+
Sbjct: 129 ADYNIQKESTLHLVLRLRGGMQMFVKTLTGNTITLEVETSDTIDNVKDKIQDKEGI 184



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 68/182 (37%), Positives = 102/182 (56%), Gaps = 5/182 (2%)

Query: 66  VKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIK 125
           VK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI+
Sbjct: 1   VKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQ 58

Query: 126 SESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYE 185
            ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ 
Sbjct: 59  KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 118

Query: 186 GKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIV 242
           GK+LED +TLA Y+++ E  L +       +Q+FV+T     + LEVE    + +VK+ +
Sbjct: 119 GKQLEDGRTLADYNIQKESTLHLVLRLRGGMQMFVKTLTGNTITLEVETSDTIDNVKDKI 178

Query: 243 AN 244
            +
Sbjct: 179 QD 180



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 67/185 (36%), Positives = 102/185 (55%), Gaps = 6/185 (3%)

Query: 144 VKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDE 203
           VK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+++ E
Sbjct: 1   VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 60

Query: 204 CLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGT 260
             L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG 
Sbjct: 61  STLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK 120

Query: 261 KLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFD 317
           +LE  +TLA Y I+    L +   L    Q+FVKT  G TITL+V+  +T+ +VK K+ D
Sbjct: 121 QLEDGRTLADYNIQKESTLHLVLRLRGGMQMFVKTLTGNTITLEVETSDTIDNVKDKIQD 180

Query: 318 KLQTP 322
           K   P
Sbjct: 181 KEGIP 185



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/179 (36%), Positives = 96/179 (53%), Gaps = 3/179 (1%)

Query: 217 VRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNN 276
           V+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y I+  
Sbjct: 1   VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 60

Query: 277 YVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGK 333
             L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK
Sbjct: 61  STLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK 120

Query: 334 RLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ 392
           +L +   LA YNIQK STLH+VL     +          +I+L +  S+  +  K K Q
Sbjct: 121 QLEDGRTLADYNIQKESTLHLVLRLRGGMQMFVKTLTGNTITLEVETSDTIDNVKDKIQ 179



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 75/143 (52%), Gaps = 6/143 (4%)

Query: 290 VKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKH 349
           VKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK 
Sbjct: 1   VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 60

Query: 350 STLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQV 403
           STLH+VL     +          +I+L +  S+  +  K K Q         + L+    
Sbjct: 61  STLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK 120

Query: 404 ALQDDRTLADYGMDLSEKVVLVF 426
            L+D RTLADY +     + LV 
Sbjct: 121 QLEDGRTLADYNIQKESTLHLVL 143



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/103 (45%), Positives = 61/103 (59%), Gaps = 2/103 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 87  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 146

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQ 102
             M++FVK  T  T T+ E     T+ N+K  IQ KEGI  DQ
Sbjct: 147 GGMQMFVKTLTGNTITL-EVETSDTIDNVKDKIQDKEGIPPDQ 188


>gi|343960965|dbj|BAK62072.1| ubiquitin [Pan troglodytes]
          Length = 177

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/157 (44%), Positives = 97/157 (61%), Gaps = 3/157 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED   +
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRAL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEV 156
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 169



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 67/171 (39%), Positives = 101/171 (59%), Gaps = 5/171 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEV 229
           +I+ GK+LED + L+ Y+++ E  L +       +QIFV+T   + + LEV
Sbjct: 119 LIFAGKQLEDGRALSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 169



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/147 (42%), Positives = 90/147 (61%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRALSDYNIQKESTLHLVL 147



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/174 (36%), Positives = 96/174 (55%), Gaps = 8/174 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDV--QPY 305
           +AG +LE  + L+ Y I+    L +   L    QIFVKT  GKTITL+V  QP+
Sbjct: 121 FAGKQLEDGRALSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVALQPF 174



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 79/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D R L+DY +     + LV 
Sbjct: 121 FAGKQLEDGRALSDYNIQKESTLHLVL 147



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 37/84 (44%), Positives = 52/84 (61%), Gaps = 2/84 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRALSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATV-VEAMPY 82
             M++FVK  T +T T+ V   P+
Sbjct: 151 GGMQIFVKTLTGKTITLEVALQPF 174


>gi|170034811|ref|XP_001845266.1| ubiquitin [Culex quinquefasciatus]
 gi|167876396|gb|EDS39779.1| ubiquitin [Culex quinquefasciatus]
          Length = 323

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 157/303 (51%), Gaps = 28/303 (9%)

Query: 81  PYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVF-----C 135
           P +TVQ++K MIQ K G  ++Q  L+ D K++ ED  T+   +++ +S IH+       C
Sbjct: 22  PSNTVQDVKVMIQQKAGCPTEQQCLIADSKVM-EDGRTLADYSVQDKSTIHVAQQAGGPC 80

Query: 136 P--KEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSK 193
                 + IFVK  TG+ + L ++   ++ DVK +V    G       +I++ + LED +
Sbjct: 81  TDCNPSMEIFVKTLTGKTIALRLRSFNSVGDVKIMVQEKEGFPPNQQRLIFDCQLLEDGR 140

Query: 194 TLAFYDMK--DECLL--------EMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVA 243
           TL+ Y++K  D  LL        ++   +++IFV++   + + + V       +VK ++ 
Sbjct: 141 TLSGYNVKHGDIMLLLLQSGGSCDVCNPNMEIFVKSLTGKTMTMPVRRFNTAEEVKIMIL 200

Query: 244 NIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVL---------PSPF-QIFVKTW 293
               + L  Q L +   +L+  +TLA YGI+N   + +L          +P+ +I++K  
Sbjct: 201 QKEGIPLDQQRLVFNSKQLDDERTLADYGIQNKDTIHLLIRLGGPCNVCNPYMEIYIKLS 260

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKT+TL  + +NTV+DVK  + DK   P + Q ++F  + L     L+ Y+IQ    ++
Sbjct: 261 AGKTMTLRPRRFNTVKDVKNMILDKEGYPPNQQRLIFNQQELENGCSLSYYHIQDKDIIN 320

Query: 354 MVL 356
           + L
Sbjct: 321 LAL 323



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 124/260 (47%), Gaps = 25/260 (9%)

Query: 148 TGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLE 207
            G+   L+V+ S  ++DVK ++    G       +I + K +ED +TLA Y ++D+  + 
Sbjct: 12  CGKHFTLQVEPSNTVQDVKVMIQQKAGCPTEQQCLIADSKVMEDGRTLADYSVQDKSTIH 71

Query: 208 M----------FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFY 257
           +             S++IFV+T   + + L +     V DVK +V          Q L +
Sbjct: 72  VAQQAGGPCTDCNPSMEIFVKTLTGKTIALRLRSFNSVGDVKIMVQEKEGFPPNQQRLIF 131

Query: 258 AGTKLEACKTLASYGIKNNYVL----------DVLPSPFQIFVKTWGGKTITLDVQPYNT 307
               LE  +TL+ Y +K+  ++          DV     +IFVK+  GKT+T+ V+ +NT
Sbjct: 132 DCQLLEDGRTLSGYNVKHGDIMLLLLQSGGSCDVCNPNMEIFVKSLTGKTMTMPVRRFNT 191

Query: 308 VQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPL 367
            ++VK+ +  K   PL  Q +VF  K+L +   LA Y IQ   T+H+++      +  P 
Sbjct: 192 AEEVKIMILQKEGIPLDQQRLVFNSKQLDDERTLADYGIQNKDTIHLLIR-----LGGPC 246

Query: 368 IFIDPSISLSISISEVKEMA 387
              +P + + I +S  K M 
Sbjct: 247 NVCNPYMEIYIKLSAGKTMT 266



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 151/307 (49%), Gaps = 29/307 (9%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S  ++++K MI  K G   +   L      +E GR L DY +++ ST+H   Q  
Sbjct: 18  LQVEPSNTVQDVKVMIQQKAGCPTEQQCLIADSKVMEDGRTLADYSVQDKSTIHVAQQAG 77

Query: 60  S-------EMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLL 112
                    M++FVK  T +T   +    +++V ++K M+Q KEG   +Q  L++D +LL
Sbjct: 78  GPCTDCNPSMEIFVKTLTGKT-IALRLRSFNSVGDVKIMVQEKEGFPPNQQRLIFDCQLL 136

Query: 113 KEDTATMTSMNIKSESIIHLVF--------CPKEILSIFVKAATGEIVNLEVKHSFAIRD 164
            ED  T++  N+K   I+ L+         C    + IFVK+ TG+ + + V+      +
Sbjct: 137 -EDGRTLSGYNVKHGDIMLLLLQSGGSCDVCNPN-MEIFVKSLTGKTMTMPVRRFNTAEE 194

Query: 165 VKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEMF-----PSSI-----Q 214
           VK ++    G+      +++  K+L+D +TLA Y ++++  + +      P ++     +
Sbjct: 195 VKIMILQKEGIPLDQQRLVFNSKQLDDERTLADYGIQNKDTIHLLIRLGGPCNVCNPYME 254

Query: 215 IFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIK 274
           I+++    + + L       V+DVK ++ +        Q L +   +LE   +L+ Y I+
Sbjct: 255 IYIKLSAGKTMTLRPRRFNTVKDVKNMILDKEGYPPNQQRLIFNQQELENGCSLSYYHIQ 314

Query: 275 NNYVLDV 281
           +  ++++
Sbjct: 315 DKDIINL 321



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 106/228 (46%), Gaps = 35/228 (15%)

Query: 227 LEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL------- 279
           L+VE    V+DVK ++          Q L      +E  +TLA Y +++   +       
Sbjct: 18  LQVEPSNTVQDVKVMIQQKAGCPTEQQCLIADSKVMEDGRTLADYSVQDKSTIHVAQQAG 77

Query: 280 ----DVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRL 335
               D  PS  +IFVKT  GKTI L ++ +N+V DVK+ + +K   P + Q ++F  + L
Sbjct: 78  GPCTDCNPS-MEIFVKTLTGKTIALRLRSFNSVGDVKIMVQEKEGFPPNQQRLIFDCQLL 136

Query: 336 FENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSI----------SLSISISEVKE 385
            +   L+ YN+ KH  + ++L  S    ++     +P++          ++++ +     
Sbjct: 137 EDGRTLSGYNV-KHGDIMLLLLQSGGSCDV----CNPNMEIFVKSLTGKTMTMPVRRFNT 191

Query: 386 MAKVKFQAAVKE--------LLVDQVALQDDRTLADYGMDLSEKVVLV 425
             +VK     KE        L+ +   L D+RTLADYG+   + + L+
Sbjct: 192 AEEVKIMILQKEGIPLDQQRLVFNSKQLDDERTLADYGIQNKDTIHLL 239


>gi|386278574|gb|AFJ04519.1| ubiquitin, partial [Vernicia fordii]
          Length = 176

 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 68/168 (40%), Positives = 98/168 (58%), Gaps = 2/168 (1%)

Query: 41  LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQS 100
           L DY I+  STLH + +    M++FVK  T +T T+ E     T+ N+K  IQ KEGI  
Sbjct: 3   LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPP 61

Query: 101 DQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSF 160
           DQ  L++ GK L ED  T+   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S 
Sbjct: 62  DQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD 120

Query: 161 AIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
            I +VKA +    G+      +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 121 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 168



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 99/170 (58%), Gaps = 6/170 (3%)

Query: 193 KTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLS 249
           +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   + 
Sbjct: 1   RTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 60

Query: 250 LGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYN 306
              Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +
Sbjct: 61  PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD 120

Query: 307 TVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 121 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 170



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 81/135 (60%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 38  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 97

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 98  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 155

Query: 120 TSMNIKSESIIHLVF 134
              NI+ ES +HLV 
Sbjct: 156 ADYNIQKESTLHLVL 170



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/165 (35%), Positives = 90/165 (54%), Gaps = 3/165 (1%)

Query: 118 TMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSA 177
           T+   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+  
Sbjct: 2   TLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPP 61

Query: 178 ADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIV 234
               +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    
Sbjct: 62  DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 121

Query: 235 VRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           + +VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 122 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 166



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 63/170 (37%), Positives = 88/170 (51%), Gaps = 9/170 (5%)

Query: 266 KTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTP 322
           +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P
Sbjct: 1   RTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 60

Query: 323 LHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISE 382
              Q ++FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+
Sbjct: 61  PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD 120

Query: 383 VKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
             +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 121 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 170


>gi|56199552|gb|AAV84265.1| ubiquitin [Culicoides sonorensis]
          Length = 167

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 69/155 (44%), Positives = 96/155 (61%), Gaps = 3/155 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNL 154
           +  NI+ ES +HLV   +  + IFVK  TG+ + L
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL 167



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 65/161 (40%), Positives = 97/161 (60%), Gaps = 5/161 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRT 219
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKT 159



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/147 (42%), Positives = 90/147 (61%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 61/167 (36%), Positives = 92/167 (55%), Gaps = 6/167 (3%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITL 300
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL 167



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 80/147 (54%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|1107481|emb|CAA60629.1| unnamed protein product [Acanthamoeba sp. 4b3]
          Length = 172

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 70/160 (43%), Positives = 97/160 (60%), Gaps = 3/160 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHS 159
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESS 172



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 68/172 (39%), Positives = 100/172 (58%), Gaps = 5/172 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVE 230
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 170



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/147 (42%), Positives = 90/147 (61%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK+ + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   LA YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVL 147



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/170 (37%), Positives = 95/170 (55%), Gaps = 6/170 (3%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK+ + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQ 303
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 170



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 79/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTLADY +     + LV 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVL 147


>gi|342884385|gb|EGU84600.1| hypothetical protein FOXB_04788 [Fusarium oxysporum Fo5176]
          Length = 890

 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 73/189 (38%), Positives = 106/189 (56%), Gaps = 22/189 (11%)

Query: 174 GVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVE 230
           G+      +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE
Sbjct: 4   GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 63

Query: 231 VLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQ 287
                       ++ ID       L +AG +LE  +TL+ Y I+    L +   L    Q
Sbjct: 64  S-----------SDTID-----NRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 107

Query: 288 IFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQ 347
           IFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQ
Sbjct: 108 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 167

Query: 348 KHSTLHMVL 356
           K STLH+VL
Sbjct: 168 KESTLHLVL 176



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/191 (36%), Positives = 103/191 (53%), Gaps = 19/191 (9%)

Query: 19  KEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVV 77
           KEGI  D   L FAG +LE GR L DY I+  STLH + +    M++FVK  T +T T+ 
Sbjct: 2   KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL- 60

Query: 78  EAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPK 137
           E     T+ N                 L++ GK L ED  T++  NI+ ES +HLV   +
Sbjct: 61  EVESSDTIDN----------------RLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLR 103

Query: 138 EILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAF 197
             + IFVK  TG+ + LEV+ S  I +VK+ +    G+      +I+ GK+LED +TL+ 
Sbjct: 104 GGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 163

Query: 198 YDMKDECLLEM 208
           Y+++ E  L +
Sbjct: 164 YNIQKESTLHL 174



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/115 (45%), Positives = 69/115 (60%), Gaps = 5/115 (4%)

Query: 23  SEDICD--LFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEA 79
           S D  D  L FAG +LE GR L DY I+  STLH + +    M++FVK  T +T T+ E 
Sbjct: 64  SSDTIDNRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EV 122

Query: 80  MPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVF 134
               T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV 
Sbjct: 123 ESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVL 176



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/187 (33%), Positives = 92/187 (49%), Gaps = 33/187 (17%)

Query: 253 QDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQ 309
           Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ 
Sbjct: 10  QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 69

Query: 310 DVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIF 369
           +                 ++FAGK+L +   L+ YNIQK STLH+VL    R+     IF
Sbjct: 70  N----------------RLIFAGKQLEDGRTLSDYNIQKESTLHLVL----RLRGGMQIF 109

Query: 370 I----DPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLS 419
           +      +I+L +  S+  +  K K Q         + L+     L+D RTL+DY +   
Sbjct: 110 VKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 169

Query: 420 EKVVLVF 426
             + LV 
Sbjct: 170 STLHLVL 176



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 10/110 (9%)

Query: 317 DKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISL 376
           DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL    R+     IF+      
Sbjct: 1   DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL----RLRGGMQIFVKTLTGK 56

Query: 377 SISISEVKEMAKVKFQAAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           +I++ EV+    +        L+     L+D RTL+DY +     + LV 
Sbjct: 57  TITL-EVESSDTID-----NRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 100



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 120 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 175


>gi|242034699|ref|XP_002464744.1| hypothetical protein SORBIDRAFT_01g026250 [Sorghum bicolor]
 gi|241918598|gb|EER91742.1| hypothetical protein SORBIDRAFT_01g026250 [Sorghum bicolor]
          Length = 353

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 143/293 (48%), Gaps = 35/293 (11%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IF+K   G    +EV+ S  +  +KA V  +  V A    ++  G +LED   L+ Y 
Sbjct: 1   MQIFLKGFAGRHYTIEVQSSDTVDSLKAKVEELEAVPAKLQRLLVGGYQLEDGHKLSKYK 60

Query: 200 MKDECLLEMF---------PSSIQ--IFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDL 248
           + +   + +          PSS    I+V+T     + L+V+    V DV++ ++     
Sbjct: 61  IVEFATVHLVLRLLSCRQCPSSTDRYIYVQTRTSNTIALQVQPSDTVTDVRKNIS----- 115

Query: 249 SLGNQDLFYAGTKLEACKTLASY-GIKNNYVLDVLPSPFQIFVKTWGGKTITLDVQPYNT 307
             G+Q LF AG +L+  +T   Y  I+N+  L  L    QIFVKT+ GKT TL+V P +T
Sbjct: 116 --GHQSLFLAGNRLQDDRTFGYYYQIQNDATLH-LDFGMQIFVKTFNGKTSTLEVDPSDT 172

Query: 308 VQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSS------R 361
           V DVK K+ D+       Q I+F G RL +   L    +Q HSTLH+ L P         
Sbjct: 173 VGDVKAKMLDQ-------QKIIFDGSRLDDQRKLGSCKVQNHSTLHLDLCPRDGNGMQIA 225

Query: 362 IIELPLIFIDPSISLSISISEVKEMAKVKFQAAVKELLVDQVALQDDRTLADY 414
           +  LPL   + +I   + I++     K K Q   + LL +   L D++TLADY
Sbjct: 226 VKTLPLPGSE-AIRFKVQITDTIGDLKAKIQDQ-QRLLFNGQQLVDEQTLADY 276



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 107/370 (28%), Positives = 176/370 (47%), Gaps = 49/370 (13%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAG-RLVDYGIRNNSTLHFL---- 55
           ++V+ S+ + +LKA +   E +   +  L   G +LE G +L  Y I   +T+H +    
Sbjct: 15  IEVQSSDTVDSLKAKVEELEAVPAKLQRLLVGGYQLEDGHKLSKYKIVEFATVHLVLRLL 74

Query: 56  --HQNLSEMKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLL 112
              Q  S    ++ + T  + T+ ++  P  TV +++  I    G QS    L   G  L
Sbjct: 75  SCRQCPSSTDRYIYVQTRTSNTIALQVQPSDTVTDVRKNI---SGHQS----LFLAGNRL 127

Query: 113 KEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSV 172
           ++D        I++++ +HL F     + IFVK   G+   LEV  S  + DVKA +   
Sbjct: 128 QDDRTFGYYYQIQNDATLHLDFG----MQIFVKTFNGKTSTLEVDPSDTVGDVKAKM--- 180

Query: 173 VGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLL--EMFP---SSIQIFVRT---PIEEI 224
                    +I++G +L+D + L    +++   L  ++ P   + +QI V+T   P  E 
Sbjct: 181 ----LDQQKIIFDGSRLDDQRKLGSCKVQNHSTLHLDLCPRDGNGMQIAVKTLPLPGSEA 236

Query: 225 VRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVLPS 284
           +R +V++   + D+K   A I D     Q L + G +L   +TLA Y ++    L  L  
Sbjct: 237 IRFKVQITDTIGDLK---AKIQD----QQRLLFNGQQLVDEQTLADYDVQRLSTLH-LDC 288

Query: 285 PFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARY 344
           P Q+F+K   G+TITL+V+P NTV DV  K+        H  S+ F G  L     LA  
Sbjct: 289 PMQVFMKMSTGQTITLEVEPSNTVDDVMKKIG-------HHMSLTFDGNELDNGKTLAEC 341

Query: 345 NIQKHSTLHM 354
           N+   STLH+
Sbjct: 342 NVHMGSTLHL 351


>gi|301617753|ref|XP_002938291.1| PREDICTED: ubiquitin-like [Xenopus (Silurana) tropicalis]
          Length = 153

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 63/147 (42%), Positives = 90/147 (61%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE C++LA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDCRSLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L  YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLCDYNIQKESTLHLVL 147



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 58/147 (39%), Positives = 88/147 (59%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  ++  
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDCRSLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL  Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLCDYNIQKESTLHL 145



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 84/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE  R L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDCRSLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
              NI+ ES +HLV 
Sbjct: 133 CDYNIQKESTLHLVL 147



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 79/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDCRSLADYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLCDYNIQKESTLHLVL 147


>gi|28189917|dbj|BAC56573.1| similar to polyubiquitin [Bos taurus]
          Length = 171

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 68/150 (45%), Positives = 93/150 (62%), Gaps = 3/150 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 24  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 83

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 84  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 141

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATG 149
           +  NI+ ES +HLV   +  + IFVK  TG
Sbjct: 142 SDYNIQKESTLHLVLRLRGGMQIFVKTLTG 171



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 65/162 (40%), Positives = 98/162 (60%), Gaps = 5/162 (3%)

Query: 61  EMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMT 120
           +M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++
Sbjct: 9   KMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLS 66

Query: 121 SMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADH 180
             NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+     
Sbjct: 67  DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 126

Query: 181 IMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRT 219
            +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T
Sbjct: 127 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKT 168



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/147 (42%), Positives = 90/147 (61%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 10  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 69

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 70  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 129

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 130 FAGKQLEDGRTLSDYNIQKESTLHLVL 156



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 80/147 (54%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 10  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 69

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 70  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 129

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 130 FAGKQLEDGRTLSDYNIQKESTLHLVL 156



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/171 (33%), Positives = 90/171 (52%), Gaps = 6/171 (3%)

Query: 131 HLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLE 190
           HL    +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LE
Sbjct: 1   HLRIHSQVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 60

Query: 191 DSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIID 247
           D +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   
Sbjct: 61  DGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG 120

Query: 248 LSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 121 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 171


>gi|225733991|pdb|2ZVN|A Chain A, Nemo Cozi Domain Incomplex With Diubiquitin In P212121
           Space Group
 gi|225733992|pdb|2ZVN|G Chain G, Nemo Cozi Domain Incomplex With Diubiquitin In P212121
           Space Group
 gi|225733995|pdb|2ZVN|C Chain C, Nemo Cozi Domain Incomplex With Diubiquitin In P212121
           Space Group
 gi|225733996|pdb|2ZVN|E Chain E, Nemo Cozi Domain Incomplex With Diubiquitin In P212121
           Space Group
 gi|225733999|pdb|2ZVO|A Chain A, Nemo Cozi Domain In Complex With Diubiquitin In C2 Space
           Group
 gi|225734000|pdb|2ZVO|G Chain G, Nemo Cozi Domain In Complex With Diubiquitin In C2 Space
           Group
 gi|374074071|pdb|3AXC|A Chain A, Crystal Structure Of Linear Diubiquitin
          Length = 154

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 63/149 (42%), Positives = 91/149 (61%), Gaps = 3/149 (2%)

Query: 211 SSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLAS 270
            S+QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ 
Sbjct: 1   GSMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 60

Query: 271 YGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQS 327
           Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q 
Sbjct: 61  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 120

Query: 328 IVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 LIFAGKQLEDGRTLSDYNIQKESTLHLVL 149



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 90/147 (61%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 3   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 60

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 61  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 120

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 121 LIFAGKQLEDGRTLSDYNIQKESTLHL 147



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/135 (45%), Positives = 85/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 17  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 76

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 77  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 134

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 135 SDYNIQKESTLHLVL 149



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 80/147 (54%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 3   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 62

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 63  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 122

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 123 FAGKQLEDGRTLSDYNIQKESTLHLVL 149


>gi|27734329|gb|AAM51193.1| polyubiquitin [Haynesina germanica]
          Length = 175

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 72/170 (42%), Positives = 104/170 (61%), Gaps = 5/170 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHF-LHQN 58
           + V+ ++ I+N+KA I  KEGI  +   L FAG +LE GR L DY I+  STLH  L   
Sbjct: 8   LDVEPNDTIQNVKAKIQDKEGIPPEQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 67

Query: 59  LSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
              M++FVK  T +T T ++  P  T+QN+K  IQ KEGI  +Q  L++ GK L ED  T
Sbjct: 68  GGAMQIFVKTLTGKTIT-LDVEPNDTIQNVKAKIQDKEGIPPEQQRLIFAGKQL-EDGRT 125

Query: 119 MTSMNIKSESIIHLVFCPK-EILSIFVKAATGEIVNLEVKHSFAIRDVKA 167
           ++  NI+ ES +HLV   +   + IFVK  TG+ + L+V+ +  I++VKA
Sbjct: 126 LSDYNIQKESTLHLVLRLRGGAMQIFVKTLTGKTITLDVEPNDTIQNVKA 175



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/136 (42%), Positives = 84/136 (61%), Gaps = 4/136 (2%)

Query: 225 VRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKN----NYVLD 280
           + L+VE    +++VK  + +   +    Q L +AG +LE  +TL+ Y I+     + VL 
Sbjct: 6   ITLDVEPNDTIQNVKAKIQDKEGIPPEQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 65

Query: 281 VLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHV 340
           +     QIFVKT  GKTITLDV+P +T+Q+VK K+ DK   P   Q ++FAGK+L +   
Sbjct: 66  LRGGAMQIFVKTLTGKTITLDVEPNDTIQNVKAKIQDKEGIPPEQQRLIFAGKQLEDGRT 125

Query: 341 LARYNIQKHSTLHMVL 356
           L+ YNIQK STLH+VL
Sbjct: 126 LSDYNIQKESTLHLVL 141



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/174 (35%), Positives = 103/174 (59%), Gaps = 8/174 (4%)

Query: 148 TGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDEC--- 204
           TG+ + L+V+ +  I++VKA +    G+      +I+ GK+LED +TL+ Y+++ E    
Sbjct: 2   TGKTITLDVEPNDTIQNVKAKIQDKEGIPPEQQRLIFAGKQLEDGRTLSDYNIQKESTLH 61

Query: 205 -LLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLE 263
            +L +   ++QIFV+T   + + L+VE    +++VK  + +   +    Q L +AG +LE
Sbjct: 62  LVLRLRGGAMQIFVKTLTGKTITLDVEPNDTIQNVKAKIQDKEGIPPEQQRLIFAGKQLE 121

Query: 264 ACKTLASYGIKN----NYVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
             +TL+ Y I+     + VL +     QIFVKT  GKTITLDV+P +T+Q+VK 
Sbjct: 122 DGRTLSDYNIQKESTLHLVLRLRGGAMQIFVKTLTGKTITLDVEPNDTIQNVKA 175



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 63/175 (36%), Positives = 105/175 (60%), Gaps = 7/175 (4%)

Query: 70  TNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESI 129
           T +T T+ +  P  T+QN+K  IQ KEGI  +Q  L++ GK L ED  T++  NI+ ES 
Sbjct: 2   TGKTITL-DVEPNDTIQNVKAKIQDKEGIPPEQQRLIFAGKQL-EDGRTLSDYNIQKEST 59

Query: 130 IHLVFCPKE-ILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKK 188
           +HLV   +   + IFVK  TG+ + L+V+ +  I++VKA +    G+      +I+ GK+
Sbjct: 60  LHLVLRLRGGAMQIFVKTLTGKTITLDVEPNDTIQNVKAKIQDKEGIPPEQQRLIFAGKQ 119

Query: 189 LEDSKTLAFYDMKDEC----LLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVK 239
           LED +TL+ Y+++ E     +L +   ++QIFV+T   + + L+VE    +++VK
Sbjct: 120 LEDGRTLSDYNIQKESTLHLVLRLRGGAMQIFVKTLTGKTITLDVEPNDTIQNVK 174



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 52/142 (36%), Positives = 78/142 (54%), Gaps = 13/142 (9%)

Query: 295 GKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHM 354
           GKTITLDV+P +T+Q+VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+
Sbjct: 3   GKTITLDVEPNDTIQNVKAKIQDKEGIPPEQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 62

Query: 355 VLAPSSRIIELPLIFI----DPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVA 404
           VL      ++   IF+      +I+L +  ++  +  K K Q         + L+     
Sbjct: 63  VLRLRGGAMQ---IFVKTLTGKTITLDVEPNDTIQNVKAKIQDKEGIPPEQQRLIFAGKQ 119

Query: 405 LQDDRTLADYGMDLSEKVVLVF 426
           L+D RTL+DY +     + LV 
Sbjct: 120 LEDGRTLSDYNIQKESTLHLVL 141


>gi|26353460|dbj|BAC40360.1| unnamed protein product [Mus musculus]
          Length = 153

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 62/147 (42%), Positives = 91/147 (61%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q + +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRVIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    LD+   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLDLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 58/147 (39%), Positives = 89/147 (60%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  +++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRVIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES + LV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLDLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 60/135 (44%), Positives = 84/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   + FAG +LE GR L DY I+  STL  + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRVIFAGKQLEDGRTLSDYNIQKESTLDLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 133 SDYNIQKESTLHLVL 147



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 79/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRVIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STL +VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLDLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|301094179|ref|XP_002997933.1| ubiquitin, putative [Phytophthora infestans T30-4]
 gi|262109719|gb|EEY67771.1| ubiquitin, putative [Phytophthora infestans T30-4]
          Length = 175

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 67/163 (41%), Positives = 98/163 (60%), Gaps = 3/163 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDVEPSDSIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T ++  P  ++ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAI 162
           +  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ +  +
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPTVVL 175



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/177 (36%), Positives = 106/177 (59%), Gaps = 5/177 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +  P  ++ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-DVEPSDSIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S +I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVV 235
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE  +V+
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPTVVL 175



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 89/147 (60%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + L+VE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLDVEPSDSIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITLDV+P +++ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 98/171 (57%), Gaps = 6/171 (3%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + L+V+ S +I +VK+ +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLDVEPSDSIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + L+VE    + +VK+ + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQP 304
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITLDV+P
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEP 171



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 79/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITLDV+P +++ +VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLDVEPSDSIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  +  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|302393789|sp|P62972.2|UBIQP_XENLA RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|2118960|pir||I51568 polyubiquitin - African clawed frog (fragment)
 gi|214864|gb|AAA49978.1| polyubiquitin, partial [Xenopus laevis]
          Length = 167

 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 64/162 (39%), Positives = 97/162 (59%), Gaps = 2/162 (1%)

Query: 47  RNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLV 106
           +  STLH + +    M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L+
Sbjct: 1   QKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLI 59

Query: 107 YDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVK 166
           + GK L ED  T++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK
Sbjct: 60  FAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVK 118

Query: 167 AIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
           A +    G+      +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 119 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 160



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/149 (41%), Positives = 90/149 (60%), Gaps = 3/149 (2%)

Query: 211 SSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLAS 270
             +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ 
Sbjct: 14  GGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 73

Query: 271 YGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQS 327
           Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q 
Sbjct: 74  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 133

Query: 328 IVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 134 LIFAGKQLEDGRTLSDYNIQKESTLHLVL 162



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/135 (45%), Positives = 85/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 30  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 89

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 90  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 147

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 148 SDYNIQKESTLHLVL 162



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 81/151 (53%), Gaps = 6/151 (3%)

Query: 282 LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVL 341
           L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L
Sbjct: 12  LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 71

Query: 342 ARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAV 395
           + YNIQK STLH+VL     +          +I+L +  S+  E  K K Q         
Sbjct: 72  SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 131

Query: 396 KELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           + L+     L+D RTL+DY +     + LV 
Sbjct: 132 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 162


>gi|372467011|pdb|3U30|A Chain A, Crystal Structure Of A Linear-Specific Ubiquitin Fab Bound
           To Linear Ubiquitin
 gi|372467014|pdb|3U30|D Chain D, Crystal Structure Of A Linear-Specific Ubiquitin Fab Bound
           To Linear Ubiquitin
          Length = 172

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 63/149 (42%), Positives = 91/149 (61%), Gaps = 3/149 (2%)

Query: 211 SSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLAS 270
           S +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ 
Sbjct: 19  SHMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 78

Query: 271 YGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQS 327
           Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q 
Sbjct: 79  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 138

Query: 328 IVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 139 LIFAGKQLEDGRTLSDYNIQKESTLHLVL 167



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 61/149 (40%), Positives = 91/149 (61%), Gaps = 2/149 (1%)

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
           S M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 19  SHMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 76

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 77  SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 136

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 137 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 165



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/135 (45%), Positives = 85/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 35  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 94

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 95  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 152

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 153 SDYNIQKESTLHLVL 167



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 57/149 (38%), Positives = 81/149 (54%), Gaps = 6/149 (4%)

Query: 284 SPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLAR 343
           S  QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ 
Sbjct: 19  SHMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 78

Query: 344 YNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKE 397
           YNIQK STLH+VL     +          +I+L +  S+  E  K K Q         + 
Sbjct: 79  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 138

Query: 398 LLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           L+     L+D RTL+DY +     + LV 
Sbjct: 139 LIFAGKQLEDGRTLSDYNIQKESTLHLVL 167


>gi|567767|gb|AAA53067.1| p125 protein, partial [Bovine viral diarrhea virus 1]
          Length = 1054

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 65/163 (39%), Positives = 98/163 (60%), Gaps = 2/163 (1%)

Query: 46  IRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTL 105
           +R  STLH + +    M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L
Sbjct: 331 LRKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRL 389

Query: 106 VYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDV 165
           ++ GK L ED  T++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +V
Sbjct: 390 IFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 448

Query: 166 KAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
           KA +    G+      +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 449 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 491



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 62/149 (41%), Positives = 90/149 (60%), Gaps = 3/149 (2%)

Query: 211 SSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLAS 270
             +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ 
Sbjct: 345 GGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 404

Query: 271 YGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQS 327
           Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q 
Sbjct: 405 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 464

Query: 328 IVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 465 LIFAGKQLEDGRTLSDYNIQKESTLHLVL 493



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 62/135 (45%), Positives = 85/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 361 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 420

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 421 GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 478

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 479 SDYNIQKESTLHLVL 493



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 81/151 (53%), Gaps = 6/151 (3%)

Query: 282 LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVL 341
           L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L
Sbjct: 343 LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 402

Query: 342 ARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAV 395
           + YNIQK STLH+VL     +          +I+L +  S+  E  K K Q         
Sbjct: 403 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 462

Query: 396 KELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           + L+     L+D RTL+DY +     + LV 
Sbjct: 463 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 493


>gi|302595966|sp|P0CG83.1|UBIQP_HORVU RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|755763|emb|CAA27751.1| unnamed protein product [Hordeum vulgare subsp. vulgare]
          Length = 171

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 96/165 (58%), Gaps = 2/165 (1%)

Query: 44  YGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQF 103
           Y I+  STLH + +    M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ 
Sbjct: 1   YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQ 59

Query: 104 TLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIR 163
            L++ GK L ED  T+   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I 
Sbjct: 60  RLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 118

Query: 164 DVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +VKA +    G+      +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 119 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 163



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 95/165 (57%), Gaps = 6/165 (3%)

Query: 198 YDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQD 254
           Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q 
Sbjct: 1   YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 60

Query: 255 LFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDV 311
           L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +V
Sbjct: 61  LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 120

Query: 312 KVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 121 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 165



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 81/135 (60%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 33  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 92

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 93  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 150

Query: 120 TSMNIKSESIIHLVF 134
              NI+ ES +HLV 
Sbjct: 151 ADYNIQKESTLHLVL 165



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 79/151 (52%), Gaps = 6/151 (3%)

Query: 282 LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVL 341
           L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L
Sbjct: 15  LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 74

Query: 342 ARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------V 395
           A YNIQK STLH+VL     +          +I+L +  S+  +  K K Q         
Sbjct: 75  ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 134

Query: 396 KELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           + L+     L+D RTLADY +     + LV 
Sbjct: 135 QRLIFAGKQLEDGRTLADYNIQKESTLHLVL 165


>gi|5523969|gb|AAD44037.1|AF104020_1 polyprotein [Bovine viral diarrhea virus 2]
          Length = 318

 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 64/159 (40%), Positives = 96/159 (60%), Gaps = 2/159 (1%)

Query: 50  STLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDG 109
           STLH + +    M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ G
Sbjct: 98  STLHLVLRLRGGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQRRLIFAG 156

Query: 110 KLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIV 169
           K L ED  T++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +
Sbjct: 157 KQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 215

Query: 170 GSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
               G+      +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 216 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 254



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 61/149 (40%), Positives = 90/149 (60%), Gaps = 3/149 (2%)

Query: 211 SSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLAS 270
             +QIFV+T   + + LEVE    + +VK  + +   +    + L +AG +LE  +TL+ 
Sbjct: 108 GGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQRRLIFAGKQLEDGRTLSD 167

Query: 271 YGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQS 327
           Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q 
Sbjct: 168 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 227

Query: 328 IVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 228 LIFAGKQLEDGRTLSDYNIQKESTLHLVL 256



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/135 (45%), Positives = 85/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 124 LEVEPSDTIENVKAKIQDKEGIPPDQRRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 183

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 184 GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 241

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 242 SDYNIQKESTLHLVL 256



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 80/147 (54%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   + ++FAGK+L +   L+ YN
Sbjct: 110 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQRRLIFAGKQLEDGRTLSDYN 169

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 170 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 229

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 230 FAGKQLEDGRTLSDYNIQKESTLHLVL 256


>gi|297735960|emb|CBI23934.3| unnamed protein product [Vitis vinifera]
          Length = 204

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 69/161 (42%), Positives = 92/161 (57%), Gaps = 3/161 (1%)

Query: 4   KKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEM 62
           + S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +    M
Sbjct: 41  QSSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 100

Query: 63  KLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSM 122
           ++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+   
Sbjct: 101 QIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADY 158

Query: 123 NIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIR 163
           NI+ ES +HLV   +  + IFVK  TG+ + LE      +R
Sbjct: 159 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLESTLHLVLR 199



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 105/200 (52%), Gaps = 26/200 (13%)

Query: 62  MKLFVKIPTNQTATV-----------------VEAMP-----YHTVQNIKTMIQVKEGIQ 99
           M++FVK  T +T T+                  E +P       T+ N+K  IQ KEGI 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQSSDTIDNVKAKIQDKEGIP 60

Query: 100 SDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHS 159
            DQ  L++ GK L ED  T+   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S
Sbjct: 61  PDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESS 119

Query: 160 FAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIF 216
             I +VKA +    G+      +I+ GK+LED +TLA Y+++ E  L +       +QIF
Sbjct: 120 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIF 179

Query: 217 VRTPIEEIVRLEVEVLIVVR 236
           V+T   + + LE  + +V+R
Sbjct: 180 VKTLTGKTITLESTLHLVLR 199



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 66/170 (38%), Positives = 90/170 (52%), Gaps = 26/170 (15%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVK--------------------EIVANIID---LS 249
           +QIFV+T   + + LEVE    + +VK                     + A I D   + 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQSSDTIDNVKAKIQDKEGIP 60

Query: 250 LGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYN 306
              Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +
Sbjct: 61  PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD 120

Query: 307 TVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 121 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 170



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/191 (34%), Positives = 97/191 (50%), Gaps = 29/191 (15%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGV----SAADHI-------------- 181
           + IFVK  TG+ + LEV+ S  I +VKA +    G+     ++D I              
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQSSDTIDNVKAKIQDKEGIP 60

Query: 182 -----MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLI 233
                +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE   
Sbjct: 61  PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD 120

Query: 234 VVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFV 290
            + +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFV
Sbjct: 121 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFV 180

Query: 291 KTWGGKTITLD 301
           KT  GKTITL+
Sbjct: 181 KTLTGKTITLE 191



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/170 (33%), Positives = 79/170 (46%), Gaps = 29/170 (17%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQS------------------ 327
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   QS                  
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQSSDTIDNVKAKIQDKEGIP 60

Query: 328 -----IVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISE 382
                ++FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+
Sbjct: 61  PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD 120

Query: 383 VKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
             +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 121 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 170



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 35/77 (45%), Positives = 48/77 (62%), Gaps = 1/77 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 114 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 173

Query: 60  SEMKLFVKIPTNQTATV 76
             M++FVK  T +T T+
Sbjct: 174 GGMQIFVKTLTGKTITL 190


>gi|357016993|gb|AET50525.1| hypothetical protein [Eimeria tenella]
          Length = 153

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/147 (42%), Positives = 90/147 (61%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + L+VE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITLDV+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 58/147 (39%), Positives = 90/147 (61%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-DVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHL 145



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 84/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T ++  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 133 SDYNIQKESTLHLVL 147



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 80/147 (54%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITLDV+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|28189839|dbj|BAC56534.1| similar to polyubiquitin [Bos taurus]
          Length = 157

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/149 (41%), Positives = 90/149 (60%), Gaps = 3/149 (2%)

Query: 211 SSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLAS 270
             +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ 
Sbjct: 3   GGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 62

Query: 271 YGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQS 327
           Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q 
Sbjct: 63  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 122

Query: 328 IVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 123 LIFAGKQLEDGRTLSDYNIQKESTLHLVL 151



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 90/147 (61%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 5   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 62

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 63  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 122

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 123 LIFAGKQLEDGRTLSDYNIQKESTLHL 149



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/135 (45%), Positives = 85/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 19  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 78

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 79  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 136

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 137 SDYNIQKESTLHLVL 151



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 81/151 (53%), Gaps = 6/151 (3%)

Query: 282 LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVL 341
           L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L
Sbjct: 1   LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 60

Query: 342 ARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAV 395
           + YNIQK STLH+VL     +          +I+L +  S+  E  K K Q         
Sbjct: 61  SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 120

Query: 396 KELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           + L+     L+D RTL+DY +     + LV 
Sbjct: 121 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 151


>gi|339232992|ref|XP_003381613.1| ubiquitin family protein [Trichinella spiralis]
 gi|316979552|gb|EFV62333.1| ubiquitin family protein [Trichinella spiralis]
          Length = 193

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 69/174 (39%), Positives = 103/174 (59%), Gaps = 3/174 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDSIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K+ IQ KEGI  DQ  L++ GK L ED   +
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRML 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVV 173
           ++ NI+ ES +HLV   +  + I     TG+ + +EV+ S     V+ I  S++
Sbjct: 133 SNYNIQKESTLHLVLRLRGGMQISATTLTGKHITVEVEPSDTPESVRGINPSII 186



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 62/147 (42%), Positives = 91/147 (61%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDSIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +  +L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRMLSNYNIQKESTLHLVL 147



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/190 (35%), Positives = 106/190 (55%), Gaps = 5/190 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  +++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDSIENVKGKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED + L+ Y+++ E  L +       +QI   T   + + +EVE       V
Sbjct: 119 LIFAGKQLEDGRMLSNYNIQKESTLHLVLRLRGGMQISATTLTGKHITVEVEPSDTPESV 178

Query: 239 KEIVANIIDL 248
           + I  +II L
Sbjct: 179 RGINPSIICL 188


>gi|212851|gb|AAA49129.1| ubiquitin polyprotein (heat shock related), partial [Gallus gallus]
          Length = 157

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/149 (41%), Positives = 90/149 (60%), Gaps = 3/149 (2%)

Query: 211 SSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLAS 270
             +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ 
Sbjct: 3   GGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 62

Query: 271 YGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQS 327
           Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q 
Sbjct: 63  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 122

Query: 328 IVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 123 LIFAGKQLEDGRTLSDYNIQKESTLHLVL 151



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 90/147 (61%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 5   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 62

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 63  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 122

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 123 LIFAGKQLEDGRTLSDYNIQKESTLHL 149



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/135 (45%), Positives = 85/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 19  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 78

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 79  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 136

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 137 SDYNIQKESTLHLVL 151



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 81/151 (53%), Gaps = 6/151 (3%)

Query: 282 LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVL 341
           L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L
Sbjct: 1   LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 60

Query: 342 ARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAV 395
           + YNIQK STLH+VL     +          +I+L +  S+  E  K K Q         
Sbjct: 61  SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 120

Query: 396 KELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           + L+     L+D RTL+DY +     + LV 
Sbjct: 121 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 151


>gi|118793820|ref|XP_321091.3| AGAP001970-PA [Anopheles gambiae str. PEST]
 gi|116115995|gb|EAA01176.4| AGAP001970-PA [Anopheles gambiae str. PEST]
          Length = 236

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 120/223 (53%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + L+V  S  + D+K+ +    G++     +I+ GK+L+D + ++ Y+
Sbjct: 1   MQIFVKTLTGKTITLDVIASETVLDIKSKIEQREGIAPDQQRIIFAGKQLDDGRIISDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++    + +       +QIFVR    + + ++ E    V  VK+ +    ++    Q + 
Sbjct: 61  IQHGSTMHLVLRLKGGMQIFVRMLTGKTIAIDTEPEATVESVKKQIDEREEIPPNQQRMI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  + L  Y I     + +   L    QIFV+   GKTI +D +P  TV+ VK 
Sbjct: 121 FAGKQLEDGRQLQEYSIIKASTIHLVLRLKGGMQIFVRMLTGKTIAVDTEPEATVESVKK 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           ++ ++ + P + Q ++FAGK+L +   L  Y+I K ST+H+VL
Sbjct: 181 QIDEREEIPPNQQRMIFAGKQLEDGRQLQEYSIIKASTIHLVL 223



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 108/196 (55%), Gaps = 3/196 (1%)

Query: 6   SEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGRLV-DYGIRNNSTLHFLHQNLSEMKL 64
           SE + ++K+ I  +EGI+ D   + FAG +L+ GR++ DY I++ ST+H + +    M++
Sbjct: 20  SETVLDIKSKIEQREGIAPDQQRIIFAGKQLDDGRIISDYNIQHGSTMHLVLRLKGGMQI 79

Query: 65  FVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNI 124
           FV++ T +T   ++  P  TV+++K  I  +E I  +Q  +++ GK L ED   +   +I
Sbjct: 80  FVRMLTGKT-IAIDTEPEATVESVKKQIDEREEIPPNQQRMIFAGKQL-EDGRQLQEYSI 137

Query: 125 KSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIY 184
              S IHLV   K  + IFV+  TG+ + ++ +    +  VK  +     +      MI+
Sbjct: 138 IKASTIHLVLRLKGGMQIFVRMLTGKTIAVDTEPEATVESVKKQIDEREEIPPNQQRMIF 197

Query: 185 EGKKLEDSKTLAFYDM 200
            GK+LED + L  Y +
Sbjct: 198 AGKQLEDGRQLQEYSI 213



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 108/215 (50%), Gaps = 5/215 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ + +   TV +IK+ I+ +EGI  DQ  +++ GK L +D   ++ 
Sbjct: 1   MQIFVKTLTGKTITL-DVIASETVLDIKSKIEQREGIAPDQQRIIFAGKQL-DDGRIISD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+  S +HLV   K  + IFV+  TG+ + ++ +    +  VK  +     +      
Sbjct: 59  YNIQHGSTMHLVLRLKGGMQIFVRMLTGKTIAIDTEPEATVESVKKQIDEREEIPPNQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           MI+ GK+LED + L  Y +     + +       +QIFVR    + + ++ E    V  V
Sbjct: 119 MIFAGKQLEDGRQLQEYSIIKASTIHLVLRLKGGMQIFVRMLTGKTIAVDTEPEATVESV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGI 273
           K+ +    ++    Q + +AG +LE  + L  Y I
Sbjct: 179 KKQIDEREEIPPNQQRMIFAGKQLEDGRQLQEYSI 213


>gi|226484009|emb|CAX79673.1| ubiquitin C [Schistosoma japonicum]
 gi|226484011|emb|CAX79674.1| ubiquitin C [Schistosoma japonicum]
 gi|226484013|emb|CAX79675.1| ubiquitin C [Schistosoma japonicum]
          Length = 153

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/147 (42%), Positives = 90/147 (61%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 90/147 (61%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHL 145



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 62/135 (45%), Positives = 85/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 133 SDYNIQKESTLHLVL 147



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 80/147 (54%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|449483218|ref|XP_004156525.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like [Cucumis
           sativus]
          Length = 208

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 67/165 (40%), Positives = 95/165 (57%), Gaps = 7/165 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV-------LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHL 325
           I+    L +       +  P QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   
Sbjct: 61  IQKESTLHLVLRLRGGIIEPMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 120

Query: 326 QSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFI 370
           Q ++FAGK+L +   LA YNIQK STLH+VL     IIE  L+ +
Sbjct: 121 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMAL 165



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 61/151 (40%), Positives = 88/151 (58%), Gaps = 6/151 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPK----EILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSA 177
            NI+ ES +HLV   +    E + IFVK  TG+ + LEV+ S  I +VKA +    G+  
Sbjct: 59  YNIQKESTLHLVLRLRGGIIEPMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPP 118

Query: 178 ADHIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
               +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 119 DQQRLIFAGKQLEDGRTLADYNIQKESTLHL 149



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 63/139 (45%), Positives = 82/139 (58%), Gaps = 7/139 (5%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHF---LH 56
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH    L 
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 57  QNLSE-MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKED 115
             + E M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED
Sbjct: 75  GGIIEPMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-ED 132

Query: 116 TATMTSMNIKSESIIHLVF 134
             T+   NI+ ES +HLV 
Sbjct: 133 GRTLADYNIQKESTLHLVL 151



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 61/151 (40%), Positives = 83/151 (54%), Gaps = 10/151 (6%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFI----DPSISLSISISEVKEMAKVKFQ------AAV 395
           IQK STLH+VL     IIE   IF+      +I+L +  S+  +  K K Q         
Sbjct: 61  IQKESTLHLVLRLRGGIIEPMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 120

Query: 396 KELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           + L+     L+D RTLADY +     + LV 
Sbjct: 121 QRLIFAGKQLEDGRTLADYNIQKESTLHLVL 151


>gi|414865716|tpg|DAA44273.1| TPA: Ubiquitin fusion protein [Zea mays]
          Length = 205

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 67/158 (42%), Positives = 92/158 (58%), Gaps = 3/158 (1%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPL 367
           FAGK+L +   LA YNIQK STLH+VL     IIE  L
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSL 158



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 87/147 (59%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHL 145



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 81/135 (60%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
              NI+ ES +HLV 
Sbjct: 133 ADYNIQKESTLHLVL 147



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 78/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELL 399
           IQK STLH+VL     +          +I+L +  S+  +  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTLADY +     + LV 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVL 147


>gi|123718340|emb|CAL30085.1| polyubiquitin [Globodera pallida]
          Length = 154

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 63/147 (42%), Positives = 89/147 (60%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   LA YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVL 147



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 88/147 (59%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHL 145



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 83/135 (61%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
              NI+ ES +HLV 
Sbjct: 133 ADYNIQKESTLHLVL 147



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 79/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTLADY +     + LV 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVL 147


>gi|209875527|ref|XP_002139206.1| ubiquitin family protein [Cryptosporidium muris RN66]
 gi|209554812|gb|EEA04857.1| ubiquitin family protein [Cryptosporidium muris RN66]
          Length = 155

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/147 (42%), Positives = 90/147 (61%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 90/147 (61%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHL 145



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/135 (45%), Positives = 85/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 133 SDYNIQKESTLHLVL 147



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 80/147 (54%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|54300702|gb|AAV33127.1| ubiquitin C splice variant [Homo sapiens]
          Length = 153

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/147 (42%), Positives = 90/147 (61%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSGYNIQKESTLHLVL 147



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 90/147 (61%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLSGYNIQKESTLHL 145



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 62/135 (45%), Positives = 85/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 133 SGYNIQKESTLHLVL 147



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 79/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+ Y +     + LV 
Sbjct: 121 FAGKQLEDGRTLSGYNIQKESTLHLVL 147


>gi|256079432|ref|XP_002575991.1| ubiquitin (ribosomal protein L40) [Schistosoma mansoni]
          Length = 153

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/147 (42%), Positives = 90/147 (61%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 90/147 (61%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHL 145



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/135 (45%), Positives = 85/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 133 SDYNIQKESTLHLVL 147



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 80/147 (54%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|361130305|pdb|3B08|A Chain A, Crystal Structure Of The Mouse Hoil1-L-Nzf In Complex With
           Linear Di- Ubiquitin
 gi|361130307|pdb|3B08|D Chain D, Crystal Structure Of The Mouse Hoil1-L-Nzf In Complex With
           Linear Di- Ubiquitin
 gi|361130309|pdb|3B08|G Chain G, Crystal Structure Of The Mouse Hoil1-L-Nzf In Complex With
           Linear Di- Ubiquitin
 gi|361130311|pdb|3B08|J Chain J, Crystal Structure Of The Mouse Hoil1-L-Nzf In Complex With
           Linear Di- Ubiquitin
 gi|361130437|pdb|3B0A|A Chain A, Crystal Structure Of The Mouse Hoil1-L-Nzf In Complex With
           Linear Di- Ubiquitin
 gi|361130439|pdb|3B0A|D Chain D, Crystal Structure Of The Mouse Hoil1-L-Nzf In Complex With
           Linear Di- Ubiquitin
          Length = 152

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/147 (42%), Positives = 90/147 (61%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 90/147 (61%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHL 145



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/135 (45%), Positives = 85/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 133 SDYNIQKESTLHLVL 147



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 80/147 (54%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|350537349|ref|NP_001232755.1| putative ubiquitin C variant 4 [Taeniopygia guttata]
 gi|326929576|ref|XP_003210936.1| PREDICTED: polyubiquitin-like [Meleagris gallopavo]
 gi|197129060|gb|ACH45558.1| putative ubiquitin C variant 4 [Taeniopygia guttata]
 gi|225708456|gb|ACO10074.1| Ubiquitin [Osmerus mordax]
          Length = 153

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/147 (42%), Positives = 90/147 (61%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 90/147 (61%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHL 145



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/135 (45%), Positives = 85/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 133 SDYNIQKESTLHLVL 147



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 80/147 (54%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|84998672|ref|XP_954057.1| ubiquitin [Theileria annulata]
 gi|65305055|emb|CAI73380.1| ubiquitin, putative [Theileria annulata]
          Length = 159

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/147 (42%), Positives = 90/147 (61%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 90/147 (61%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHL 145



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 62/135 (45%), Positives = 85/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 133 SDYNIQKESTLHLVL 147



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 80/147 (54%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|71033201|ref|XP_766242.1| ubiquitin [Theileria parva strain Muguga]
 gi|68353199|gb|EAN33959.1| ubiquitin, putative [Theileria parva]
          Length = 155

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/147 (42%), Positives = 90/147 (61%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 90/147 (61%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHL 145



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/135 (45%), Positives = 85/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 133 SDYNIQKESTLHLVL 147



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 80/147 (54%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|395836339|ref|XP_003791115.1| PREDICTED: polyubiquitin-B [Otolemur garnettii]
 gi|149287178|gb|ABR23488.1| ubiquitin/40S ribosomal protein S27a [Ornithodoros parkeri]
 gi|194374819|dbj|BAG62524.1| unnamed protein product [Homo sapiens]
          Length = 153

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/147 (42%), Positives = 90/147 (61%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 90/147 (61%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHL 145



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/135 (45%), Positives = 85/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 133 SDYNIQKESTLHLVL 147



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 80/147 (54%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|163575|gb|AAA30720.1| polyubiquitin, partial [Bos taurus]
          Length = 164

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/149 (41%), Positives = 90/149 (60%), Gaps = 3/149 (2%)

Query: 211 SSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLAS 270
             +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ 
Sbjct: 10  GGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 69

Query: 271 YGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQS 327
           Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q 
Sbjct: 70  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 129

Query: 328 IVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 130 LIFAGKQLEDGRTLSDYNIQKESTLHLVL 158



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 63/158 (39%), Positives = 95/158 (60%), Gaps = 2/158 (1%)

Query: 51  TLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGK 110
           TLH + +    M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK
Sbjct: 1   TLHLVLRLRGGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 59

Query: 111 LLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVG 170
            L ED  T++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA + 
Sbjct: 60  QL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQ 118

Query: 171 SVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
              G+      +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 119 DKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 156



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/135 (45%), Positives = 85/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 26  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 85

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 86  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 143

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 144 SDYNIQKESTLHLVL 158



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 81/151 (53%), Gaps = 6/151 (3%)

Query: 282 LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVL 341
           L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L
Sbjct: 8   LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 67

Query: 342 ARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAV 395
           + YNIQK STLH+VL     +          +I+L +  S+  E  K K Q         
Sbjct: 68  SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 127

Query: 396 KELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           + L+     L+D RTL+DY +     + LV 
Sbjct: 128 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 158


>gi|326931517|ref|XP_003211875.1| PREDICTED: polyubiquitin-B-like isoform 1 [Meleagris gallopavo]
 gi|326931519|ref|XP_003211876.1| PREDICTED: polyubiquitin-B-like isoform 2 [Meleagris gallopavo]
 gi|149052896|gb|EDM04713.1| rCG34296, isoform CRA_a [Rattus norvegicus]
 gi|149052897|gb|EDM04714.1| rCG34296, isoform CRA_a [Rattus norvegicus]
 gi|344245202|gb|EGW01306.1| Ubiquitin [Cricetulus griseus]
          Length = 153

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/147 (42%), Positives = 90/147 (61%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 90/147 (61%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHL 145



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/135 (45%), Positives = 85/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 133 SDYNIQKESTLHLVL 147



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 80/147 (54%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|7799051|emb|CAB90826.1| ubiquitin [Cyanidium caldarium]
          Length = 153

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/147 (42%), Positives = 90/147 (61%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 59/147 (40%), Positives = 91/147 (61%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHL 145



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 86/135 (63%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 133 SDYNIQKESTLHLVL 147



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 80/147 (54%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|440792566|gb|ELR13775.1| polyubiquitin, putative [Acanthamoeba castellanii str. Neff]
          Length = 153

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/147 (42%), Positives = 90/147 (61%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK+ + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   LA YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVL 147



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 59/147 (40%), Positives = 87/147 (59%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHL 145



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 60/135 (44%), Positives = 82/135 (60%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
              NI+ ES +HLV 
Sbjct: 133 ADYNIQKESTLHLVL 147



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 79/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTLADY +     + LV 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVL 147


>gi|388571222|gb|AFK73707.1| ubiquitin [Ostrea edulis]
          Length = 153

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/147 (42%), Positives = 90/147 (61%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDRQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 59/147 (40%), Positives = 90/147 (61%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  D+  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDRQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHL 145



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/135 (45%), Positives = 85/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDRQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 133 SDYNIQKESTLHLVL 147



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 80/147 (54%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDRQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|357120166|ref|XP_003561800.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin-60S ribosomal protein
           L40-like [Brachypodium distachyon]
          Length = 260

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/233 (35%), Positives = 120/233 (51%), Gaps = 32/233 (13%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  + +VKA +    G+      +I+ GK+LE+  TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVETSDTVANVKAKIQDKEGIPPEQQRLIFTGKQLEEGDTLADYG 60

Query: 200 M-KDECLLEM---FPSSIQIFVRTPI-EEIVRLEV-EVLIVVRDVKEIVANIIDLSLGNQ 253
           +   E  L +       +QIFVR+    + + L+V E    V  VK  + ++  +S G Q
Sbjct: 61  IIHKESTLHLVLRLRGGMQIFVRSICSNKTITLDVLESRDTVGSVKAKIQDVEGVSPGEQ 120

Query: 254 DLFYAGTKLEACKTLASYGIKNNYVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
            L +   ++                        QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 RLRFEVEEM------------------------QIFVKTLTGKTITLEVESSDTIDNVKA 156

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV--LAPSSRIIE 364
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V  L   S IIE
Sbjct: 157 KIQDKEGIPPDQQRLIFAGKQLDDGRTLADYNIQKESTLHLVLRLRGGSSIIE 209



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 125/274 (45%), Gaps = 41/274 (14%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     TV N+K  IQ KEGI  +Q  L++ GK L+E       
Sbjct: 1   MQIFVKTLTGKTITL-EVETSDTVANVKAKIQDKEGIPPEQQRLIFTGKQLEEGDTLADY 59

Query: 122 MNIKSESIIHLVFCPKEILSIFVKA-ATGEIVNLEVKHSF-AIRDVKAIVGSVVGVSAAD 179
             I  ES +HLV   +  + IFV++  + + + L+V  S   +  VKA +  V GVS  +
Sbjct: 60  GIIHKESTLHLVLRLRGGMQIFVRSICSNKTITLDVLESRDTVGSVKAKIQDVEGVSPGE 119

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVK 239
             + +E                   + EM     QIFV+T   + + LEVE    + +VK
Sbjct: 120 QRLRFE-------------------VEEM-----QIFVKTLTGKTITLEVESSDTIDNVK 155

Query: 240 EIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVLPSPFQIFVKTWGGKTIT 299
             + +   +    Q L +AG +L+  +TLA Y I+         S   + ++  GG +I 
Sbjct: 156 AKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYNIQKE-------STLHLVLRLRGGSSII 208

Query: 300 LD-----VQPYNTVQDVKVKLFDKLQTPLHLQSI 328
                   Q +N  + +  K + +L  PL  Q+ 
Sbjct: 209 EPNLRALAQKHNQRKQICRKCYSRL--PLKAQNC 240



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 80/187 (42%), Gaps = 55/187 (29%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAG-RLVDYG-IRNNSTLHF---- 54
           ++V+ S+ + N+KA I  KEGI  +   L F G +LE G  L DYG I   STLH     
Sbjct: 15  LEVETSDTVANVKAKIQDKEGIPPEQQRLIFTGKQLEEGDTLADYGIIHKESTLHLVLRL 74

Query: 55  -----------------------------------------------LHQNLSEMKLFVK 67
                                                          L   + EM++FVK
Sbjct: 75  RGGMQIFVRSICSNKTITLDVLESRDTVGSVKAKIQDVEGVSPGEQRLRFEVEEMQIFVK 134

Query: 68  IPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSE 127
             T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L +D  T+   NI+ E
Sbjct: 135 TLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-DDGRTLADYNIQKE 192

Query: 128 SIIHLVF 134
           S +HLV 
Sbjct: 193 STLHLVL 199


>gi|228311825|pdb|2W9N|A Chain A, Crystal Structure Of Linear Di-Ubiquitin
          Length = 152

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/146 (42%), Positives = 89/146 (60%), Gaps = 3/146 (2%)

Query: 214 QIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGI 273
           QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y I
Sbjct: 2   QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

Query: 274 KNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVF 330
           +    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++F
Sbjct: 62  QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF 121

Query: 331 AGKRLFENHVLARYNIQKHSTLHMVL 356
           AGK+L +   L+ YNIQK STLH+VL
Sbjct: 122 AGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 59/146 (40%), Positives = 89/146 (60%), Gaps = 2/146 (1%)

Query: 63  KLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSM 122
           ++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++  
Sbjct: 2   QIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDY 59

Query: 123 NIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIM 182
           NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      +
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119

Query: 183 IYEGKKLEDSKTLAFYDMKDECLLEM 208
           I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHL 145



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 62/135 (45%), Positives = 85/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 133 SDYNIQKESTLHLVL 147



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 56/146 (38%), Positives = 80/146 (54%), Gaps = 6/146 (4%)

Query: 287 QIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNI 346
           QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNI
Sbjct: 2   QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

Query: 347 QKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLV 400
           QK STLH+VL     +          +I+L +  S+  E  K K Q         + L+ 
Sbjct: 62  QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF 121

Query: 401 DQVALQDDRTLADYGMDLSEKVVLVF 426
               L+D RTL+DY +     + LV 
Sbjct: 122 AGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 48/141 (34%), Positives = 77/141 (54%), Gaps = 3/141 (2%)

Query: 142 IFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMK 201
           IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+++
Sbjct: 3   IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 62

Query: 202 DECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYA 258
            E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L +A
Sbjct: 63  KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 122

Query: 259 GTKLEACKTLASYGIKNNYVL 279
           G +LE  +TL+ Y I+    L
Sbjct: 123 GKQLEDGRTLSDYNIQKESTL 143


>gi|440789929|gb|ELR11220.1| ubiquitin domain containing protein [Acanthamoeba castellanii str.
           Neff]
          Length = 224

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/147 (42%), Positives = 90/147 (61%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK+ + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   LA YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVL 147



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 59/147 (40%), Positives = 87/147 (59%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHL 145



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/135 (44%), Positives = 82/135 (60%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
              NI+ ES +HLV 
Sbjct: 133 ADYNIQKESTLHLVL 147



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 79/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTLADY +     + LV 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVL 147


>gi|428672795|gb|EKX73708.1| ubiquitin family member protein [Babesia equi]
          Length = 155

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/147 (42%), Positives = 90/147 (61%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 90/147 (61%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHL 145



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/135 (45%), Positives = 85/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 133 SDYNIQKESTLHLVL 147



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 80/147 (54%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|403221030|dbj|BAM39163.1| ubiquitin [Theileria orientalis strain Shintoku]
          Length = 155

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/147 (42%), Positives = 90/147 (61%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 90/147 (61%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHL 145



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/135 (45%), Positives = 85/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 133 SDYNIQKESTLHLVL 147



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 80/147 (54%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|324532777|gb|ADY49258.1| Polyubiquitin, partial [Ascaris suum]
          Length = 187

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/147 (42%), Positives = 89/147 (60%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKT+TL+V+P + VQ VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTLTLEVEPSDAVQHVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L ++  L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDDRTLSDYNIQKESTLHLVL 147



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 96/164 (58%), Gaps = 3/164 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P   VQ++K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTLT-LEVEPSDAVQHVKAKIQDKEGIPPDQQRLIFAGKQL-EDDRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIR 163
           +  NI+ ES +HLV   +  + +   A     V  +V+ S +++
Sbjct: 133 SDYNIQKESTLHLVLRLRGGVRVSANAFACRDVTPQVESSDSVK 176



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 59/147 (40%), Positives = 90/147 (61%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S A++ VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTLTLEVEPSDAVQHVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 119 LIFAGKQLEDDRTLSDYNIQKESTLHL 145



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 80/147 (54%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +++L +  S+  +  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTLTLEVEPSDAVQHVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+DDRTL+DY +     + LV 
Sbjct: 121 FAGKQLEDDRTLSDYNIQKESTLHLVL 147


>gi|226477466|emb|CAX72427.1| polyubiquitin [Schistosoma japonicum]
          Length = 170

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/147 (42%), Positives = 90/147 (61%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 90/147 (61%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHL 145



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/135 (45%), Positives = 85/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 133 SDYNIQKESTLHLVL 147



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 80/147 (54%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|374073976|pdb|2Y5B|B Chain B, Structure Of Usp21 In Complex With Linear
           Diubiquitin-Aldehyde
 gi|374073978|pdb|2Y5B|F Chain F, Structure Of Usp21 In Complex With Linear
           Diubiquitin-Aldehyde
          Length = 152

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/147 (42%), Positives = 90/147 (61%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGHMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 90/147 (61%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGHMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHL 145



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 62/135 (45%), Positives = 85/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GHMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 133 SDYNIQKESTLHLVL 147



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 80/147 (54%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGHMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|159486707|ref|XP_001701379.1| bi-ubiquitin, major isoform [Chlamydomonas reinhardtii]
 gi|158271681|gb|EDO97495.1| bi-ubiquitin, major isoform [Chlamydomonas reinhardtii]
          Length = 153

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/147 (42%), Positives = 89/147 (60%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   LA YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVL 147



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 88/147 (59%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHL 145



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 83/135 (61%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
              NI+ ES +HLV 
Sbjct: 133 ADYNIQKESTLHLVL 147



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 79/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTLADY +     + LV 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVL 147


>gi|302851086|ref|XP_002957068.1| polyubiquitin [Volvox carteri f. nagariensis]
 gi|300257624|gb|EFJ41870.1| polyubiquitin [Volvox carteri f. nagariensis]
          Length = 153

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/147 (42%), Positives = 89/147 (60%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   LA YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVL 147



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 88/147 (59%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHL 145



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 83/135 (61%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
              NI+ ES +HLV 
Sbjct: 133 ADYNIQKESTLHLVL 147



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 79/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTLADY +     + LV 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVL 147


>gi|355753795|gb|EHH57760.1| Polyubiquitin-C [Macaca fascicularis]
          Length = 153

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/147 (42%), Positives = 90/147 (61%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTLENVKAKIQDKEGIPPDQQRLIFAGQQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 59/147 (40%), Positives = 90/147 (61%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ G+ L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTLENVKAKIQDKEGIPPDQQRLIFAGQQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHL 145



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 85/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ ++N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTLENVKAKIQDKEGIPPDQQRLIFAGQQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 133 SDYNIQKESTLHLVL 147



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 80/147 (54%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAG++L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTLENVKAKIQDKEGIPPDQQRLIFAGQQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|37542506|gb|AAL25813.1| polyubiquitin, partial [Prunus avium]
          Length = 154

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 63/148 (42%), Positives = 89/148 (60%), Gaps = 3/148 (2%)

Query: 212 SIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASY 271
            +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y
Sbjct: 1   GMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 60

Query: 272 GIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSI 328
            I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK  TP   Q +
Sbjct: 61  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGTPPDQQRL 120

Query: 329 VFAGKRLFENHVLARYNIQKHSTLHMVL 356
           +FAGK+L +   LA YNIQ+ STLH+VL
Sbjct: 121 IFAGKQLEDGRTLADYNIQEESTLHLVL 148



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 87/147 (59%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 2   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 59

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G       
Sbjct: 60  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGTPPDQQR 119

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TLA Y++++E  L +
Sbjct: 120 LIFAGKQLEDGRTLADYNIQEESTLHL 146



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/135 (44%), Positives = 80/135 (59%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 16  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 75

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEG   DQ  L++ GK L ED  T+
Sbjct: 76  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGTPPDQQRLIFAGKQL-EDGRTL 133

Query: 120 TSMNIKSESIIHLVF 134
              NI+ ES +HLV 
Sbjct: 134 ADYNIQEESTLHLVL 148



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 54/135 (40%), Positives = 74/135 (54%), Gaps = 6/135 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 2   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 61

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  +  K K Q         + L+
Sbjct: 62  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGTPPDQQRLI 121

Query: 400 VDQVALQDDRTLADY 414
                L+D RTLADY
Sbjct: 122 FAGKQLEDGRTLADY 136


>gi|114152964|gb|ABI52648.1| ubiquitin/40S ribosomal protein S27a fusion protein [Argas
           monolakensis]
          Length = 232

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 62/147 (42%), Positives = 90/147 (61%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 90/147 (61%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHL 145



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/135 (45%), Positives = 85/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 133 SDYNIQKESTLHLVL 147



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 80/147 (54%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|3954791|emb|CAA26488.1| unnamed protein product [Gallus gallus]
          Length = 157

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 62/149 (41%), Positives = 89/149 (59%), Gaps = 3/149 (2%)

Query: 211 SSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLAS 270
             +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ 
Sbjct: 3   GGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 62

Query: 271 YGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQS 327
           Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q 
Sbjct: 63  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 122

Query: 328 IVFAGKRLFENHVLARYNIQKHSTLHMVL 356
            +FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 123 WIFAGKQLEDGRTLSDYNIQKESTLHLVL 151



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 89/147 (60%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 5   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 62

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 63  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 122

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
            I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 123 WIFAGKQLEDGRTLSDYNIQKESTLHL 149



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 84/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 19  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 78

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ   ++ GK L ED  T+
Sbjct: 79  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRWIFAGKQL-EDGRTL 136

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 137 SDYNIQKESTLHLVL 151



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 79/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 5   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 64

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         +  +
Sbjct: 65  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRWI 124

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 125 FAGKQLEDGRTLSDYNIQKESTLHLVL 151


>gi|167519655|ref|XP_001744167.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163777253|gb|EDQ90870.1| predicted protein [Monosiga brevicollis MX1]
          Length = 153

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 90/147 (61%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +++++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLSGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 58/147 (39%), Positives = 91/147 (61%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  +++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  +G+ + LEV+ S +I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLSGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHL 145



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 60/135 (44%), Positives = 85/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  + +T T +E  P  +++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLSGKTIT-LEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 133 SDYNIQKESTLHLVL 147



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 80/147 (54%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +++++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLSGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|27734357|gb|AAM51207.1| polyubiquitin [Cercomonas edax]
 gi|27734367|gb|AAM51212.1| polyubiquitin [Cercomonas edax]
          Length = 177

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 72/171 (42%), Positives = 101/171 (59%), Gaps = 7/171 (4%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL--HQ 57
           + V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH +   +
Sbjct: 8   LDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 67

Query: 58  NLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTA 117
             S M++FVK  T +T T ++     T++N+K  IQ KEGI  DQ  L++ GK L ED  
Sbjct: 68  GGSGMQIFVKTLTGKTIT-LDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQL-EDGR 125

Query: 118 TMTSMNIKSESIIHLVFCPK--EILSIFVKAATGEIVNLEVKHSFAIRDVK 166
           T+   NI+ ES +HLV   +    + IFVK  TG+ + L+V+ S  I +VK
Sbjct: 126 TLADYNIQKESTLHLVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIENVK 176



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 58/137 (42%), Positives = 83/137 (60%), Gaps = 5/137 (3%)

Query: 225 VRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVL-- 282
           + L+VE    + +VK+ + +   +    Q L +AG +LE  +TLA Y I+    L ++  
Sbjct: 6   ITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 65

Query: 283 ---PSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENH 339
               S  QIFVKT  GKTITLDV+  +T+++VK K+ DK   P   Q ++FAGK+L +  
Sbjct: 66  LRGGSGMQIFVKTLTGKTITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGR 125

Query: 340 VLARYNIQKHSTLHMVL 356
            LA YNIQK STLH+VL
Sbjct: 126 TLADYNIQKESTLHLVL 142



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 62/175 (35%), Positives = 99/175 (56%), Gaps = 10/175 (5%)

Query: 148 TGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLE 207
           TG+ + L+V+ S  I +VK  +    G+      +I+ GK+LED +TLA Y+++ E  L 
Sbjct: 2   TGKTITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 61

Query: 208 MF-----PSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKL 262
           +       S +QIFV+T   + + L+VE    + +VK+ + +   +    Q L +AG +L
Sbjct: 62  LVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQL 121

Query: 263 EACKTLASYGIKNNYVLDVL-----PSPFQIFVKTWGGKTITLDVQPYNTVQDVK 312
           E  +TLA Y I+    L ++      S  QIFVKT  GKTITLDV+  +T+++VK
Sbjct: 122 EDGRTLADYNIQKESTLHLVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIENVK 176



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 61/164 (37%), Positives = 94/164 (57%), Gaps = 8/164 (4%)

Query: 84  TVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPK--EILS 141
           T++N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +    + 
Sbjct: 15  TIENVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGSGMQ 73

Query: 142 IFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMK 201
           IFVK  TG+ + L+V+ S  I +VK  +    G+      +I+ GK+LED +TLA Y+++
Sbjct: 74  IFVKTLTGKTITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 133

Query: 202 DECLLEMF-----PSSIQIFVRTPIEEIVRLEVEVLIVVRDVKE 240
            E  L +       S +QIFV+T   + + L+VE    + +VK+
Sbjct: 134 KESTLHLVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIENVKQ 177



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 51/128 (39%), Positives = 70/128 (54%), Gaps = 8/128 (6%)

Query: 295 GKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHM 354
           GKTITLDV+  +T+++VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+
Sbjct: 3   GKTITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 62

Query: 355 V--LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQ 406
           V  L   S +          +I+L +  S+  E  K K Q         + L+     L+
Sbjct: 63  VLRLRGGSGMQIFVKTLTGKTITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLE 122

Query: 407 DDRTLADY 414
           D RTLADY
Sbjct: 123 DGRTLADY 130


>gi|54610299|gb|AAV35212.1| polyubiquitin-like protein [Schistosoma japonicum]
          Length = 156

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 90/147 (61%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 4   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 63

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 64  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 123

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK +TLH+VL
Sbjct: 124 FAGKQLEDGRTLSDYNIQKEATLHLVL 150



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 90/147 (61%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 4   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 61

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 62  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 121

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 122 LIFAGKQLEDGRTLSDYNIQKEATLHL 148



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 85/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 18  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 77

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 78  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 135

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ E+ +HLV 
Sbjct: 136 SDYNIQKEATLHLVL 150



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 80/147 (54%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 4   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 63

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 64  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 123

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 124 FAGKQLEDGRTLSDYNIQKEATLHLVL 150



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 79/145 (54%), Gaps = 3/145 (2%)

Query: 138 EILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAF 197
           E + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ 
Sbjct: 2   ERMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 61

Query: 198 YDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQD 254
           Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q 
Sbjct: 62  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 121

Query: 255 LFYAGTKLEACKTLASYGIKNNYVL 279
           L +AG +LE  +TL+ Y I+    L
Sbjct: 122 LIFAGKQLEDGRTLSDYNIQKEATL 146


>gi|5523979|gb|AAD44042.1|AF104025_1 polyprotein [Bovine viral diarrhea virus 2]
          Length = 432

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 62/149 (41%), Positives = 90/149 (60%), Gaps = 3/149 (2%)

Query: 211 SSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLAS 270
             +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ 
Sbjct: 222 GGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 281

Query: 271 YGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQS 327
           Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q 
Sbjct: 282 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 341

Query: 328 IVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 342 LIFAGKQLEDGRTLSDYNIQKESTLHLVL 370



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 90/147 (61%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 224 MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 281

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 282 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 341

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 342 LIFAGKQLEDGRTLSDYNIQKESTLHL 368



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/135 (45%), Positives = 85/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 238 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 297

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 298 GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 355

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 356 SDYNIQKESTLHLVL 370



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 80/147 (54%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 224 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 283

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 284 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 343

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 344 FAGKQLEDGRTLSDYNIQKESTLHLVL 370


>gi|82622379|gb|ABB86777.1| unknown [Theileria lestoquardi]
          Length = 159

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 90/147 (61%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ D+   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDEEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 90/147 (61%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDEEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHL 145



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 85/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ +EGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDEEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 133 SDYNIQKESTLHLVL 147



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 80/147 (54%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDEEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|323451976|gb|EGB07851.1| ubiquitin [Aureococcus anophagefferens]
          Length = 153

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 90/147 (61%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + L+VE    + +VK+ + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITLDV+P +++ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 89/147 (60%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +  P  T+ N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-DVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S +I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/135 (43%), Positives = 81/135 (60%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T ++  P  ++ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 133 SDYNIQKESTLHLVL 147



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 79/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITLDV+P +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  +  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|27734361|gb|AAM51209.1| polyubiquitin [Cercomonas edax]
          Length = 177

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 72/171 (42%), Positives = 101/171 (59%), Gaps = 7/171 (4%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL--HQ 57
           + V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH +   +
Sbjct: 8   LDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 67

Query: 58  NLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTA 117
             S M++FVK  T +T T ++     T++N+K  IQ KEGI  DQ  L++ GK L ED  
Sbjct: 68  GGSGMQIFVKTLTGKTIT-LDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQL-EDGR 125

Query: 118 TMTSMNIKSESIIHLVFCPK--EILSIFVKAATGEIVNLEVKHSFAIRDVK 166
           T+   NI+ ES +HLV   +    + IFVK  TG+ + L+V+ S  I +VK
Sbjct: 126 TLADYNIQKESTLHLVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIGNVK 176



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 58/137 (42%), Positives = 83/137 (60%), Gaps = 5/137 (3%)

Query: 225 VRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVL-- 282
           + L+VE    + +VK+ + +   +    Q L +AG +LE  +TLA Y I+    L ++  
Sbjct: 6   ITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 65

Query: 283 ---PSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENH 339
               S  QIFVKT  GKTITLDV+  +T+++VK K+ DK   P   Q ++FAGK+L +  
Sbjct: 66  LRGGSGMQIFVKTLTGKTITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGR 125

Query: 340 VLARYNIQKHSTLHMVL 356
            LA YNIQK STLH+VL
Sbjct: 126 TLADYNIQKESTLHLVL 142



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/175 (35%), Positives = 98/175 (56%), Gaps = 10/175 (5%)

Query: 148 TGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLE 207
           TG+ + L+V+ S  I +VK  +    G+      +I+ GK+LED +TLA Y+++ E  L 
Sbjct: 2   TGKTITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 61

Query: 208 MF-----PSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKL 262
           +       S +QIFV+T   + + L+VE    + +VK+ + +   +    Q L +AG +L
Sbjct: 62  LVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQL 121

Query: 263 EACKTLASYGIKNNYVLDVL-----PSPFQIFVKTWGGKTITLDVQPYNTVQDVK 312
           E  +TLA Y I+    L ++      S  QIFVKT  GKTITLDV+  +T+ +VK
Sbjct: 122 EDGRTLADYNIQKESTLHLVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIGNVK 176



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 61/164 (37%), Positives = 94/164 (57%), Gaps = 8/164 (4%)

Query: 84  TVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPK--EILS 141
           T++N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +    + 
Sbjct: 15  TIENVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGSGMQ 73

Query: 142 IFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMK 201
           IFVK  TG+ + L+V+ S  I +VK  +    G+      +I+ GK+LED +TLA Y+++
Sbjct: 74  IFVKTLTGKTITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 133

Query: 202 DECLLEMF-----PSSIQIFVRTPIEEIVRLEVEVLIVVRDVKE 240
            E  L +       S +QIFV+T   + + L+VE    + +VK+
Sbjct: 134 KESTLHLVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIGNVKQ 177



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 51/128 (39%), Positives = 70/128 (54%), Gaps = 8/128 (6%)

Query: 295 GKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHM 354
           GKTITLDV+  +T+++VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+
Sbjct: 3   GKTITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 62

Query: 355 V--LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQ 406
           V  L   S +          +I+L +  S+  E  K K Q         + L+     L+
Sbjct: 63  VLRLRGGSGMQIFVKTLTGKTITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLE 122

Query: 407 DDRTLADY 414
           D RTLADY
Sbjct: 123 DGRTLADY 130


>gi|413926514|gb|AFW66446.1| ubiquitin2 [Zea mays]
 gi|413935669|gb|AFW70220.1| polyubiquitin-like protein [Zea mays]
          Length = 153

 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 63/147 (42%), Positives = 88/147 (59%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   LA YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVL 147



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 87/147 (59%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHL 145



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 81/135 (60%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
              NI+ ES +HLV 
Sbjct: 133 ADYNIQKESTLHLVL 147



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 78/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  +  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTLADY +     + LV 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVL 147


>gi|21554192|gb|AAM63271.1| unknown [Arabidopsis thaliana]
          Length = 154

 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 63/147 (42%), Positives = 88/147 (59%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQXLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   LA YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVL 147



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 87/147 (59%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQXLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHL 145



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 81/135 (60%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQXLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
              NI+ ES +HLV 
Sbjct: 133 ADYNIQKESTLHLVL 147



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 78/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQXLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  +  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTLADY +     + LV 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVL 147


>gi|384371341|gb|ABF06579.2| polyubiquitin, partial [Gladiolus grandiflorus]
          Length = 162

 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 67/150 (44%), Positives = 89/150 (59%), Gaps = 3/150 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATG 149
              NI+ ES +HLV   +  + IFVK  TG
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTG 162



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 63/147 (42%), Positives = 88/147 (59%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   LA YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVL 147



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/161 (40%), Positives = 94/161 (58%), Gaps = 5/161 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRT 219
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKT 159



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 78/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  +  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTLADY +     + LV 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVL 147


>gi|397614491|gb|EJK62831.1| hypothetical protein THAOC_16543 [Thalassiosira oceanica]
          Length = 240

 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 62/147 (42%), Positives = 89/147 (60%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + L+VE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 88  LQIFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 147

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITLDV+P +T+ +VK K+ DK   P   Q ++
Sbjct: 148 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLI 207

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 208 FAGKQLEDGRTLSDYNIQKESTLHLVL 234



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 89/147 (60%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           +++FVK  T +T T+ +  P  T+ N+KT IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 88  LQIFVKTLTGKTITL-DVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 145

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VK  +    G+      
Sbjct: 146 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQR 205

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 206 LIFAGKQLEDGRTLSDYNIQKESTLHL 232



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 82/135 (60%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 102 LDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 161

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T ++  P  T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 162 GGMQIFVKTLTGKTIT-LDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 219

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 220 SDYNIQKESTLHLVL 234



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 59/153 (38%), Positives = 84/153 (54%), Gaps = 7/153 (4%)

Query: 281 VLPSPF-QIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENH 339
            +P+PF QIFVKT  GKTITLDV+P +T+ +VK K+ DK   P   Q ++FAGK+L +  
Sbjct: 82  TVPTPFLQIFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR 141

Query: 340 VLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------A 393
            L+ YNIQK STLH+VL     +          +I+L +  S+  +  K K Q       
Sbjct: 142 TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPP 201

Query: 394 AVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
             + L+     L+D RTL+DY +     + LV 
Sbjct: 202 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 234



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 78/147 (53%), Gaps = 3/147 (2%)

Query: 136 PKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTL 195
           P   L IFVK  TG+ + L+V+ S  I +VK  +    G+      +I+ GK+LED +TL
Sbjct: 84  PTPFLQIFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTL 143

Query: 196 AFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGN 252
           + Y+++ E  L +       +QIFV+T   + + L+VE    + +VK  + +   +    
Sbjct: 144 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQ 203

Query: 253 QDLFYAGTKLEACKTLASYGIKNNYVL 279
           Q L +AG +LE  +TL+ Y I+    L
Sbjct: 204 QRLIFAGKQLEDGRTLSDYNIQKESTL 230


>gi|71835909|gb|AAZ42330.1| ubiquitin protein 1 [Caenorhabditis remanei]
          Length = 164

 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 61/149 (40%), Positives = 89/149 (59%), Gaps = 3/149 (2%)

Query: 211 SSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLAS 270
             +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ 
Sbjct: 9   GGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 68

Query: 271 YGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQS 327
           Y I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q 
Sbjct: 69  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 128

Query: 328 IVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 129 LIFAGKQLEDGRTLSDYNIQKESTLHLVL 157



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 61/157 (38%), Positives = 93/157 (59%), Gaps = 2/157 (1%)

Query: 52  LHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKL 111
           LH + +    M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK 
Sbjct: 1   LHLVLRLRGGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQ 59

Query: 112 LKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGS 171
           L ED  T++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +  
Sbjct: 60  L-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD 118

Query: 172 VVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             G+      +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 119 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 155



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 84/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 25  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 84

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 85  GGMQIFVKTLTGKTIT-LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 142

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 143 SDYNIQKESTLHLVL 157



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/151 (37%), Positives = 80/151 (52%), Gaps = 6/151 (3%)

Query: 282 LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVL 341
           L    QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L
Sbjct: 7   LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 66

Query: 342 ARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAV 395
           + YNIQK STLH+VL     +          +I+L +  S+  E  K K Q         
Sbjct: 67  SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 126

Query: 396 KELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           + L+     L+D RTL+DY +     + LV 
Sbjct: 127 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 157


>gi|334186377|ref|NP_001190681.1| ubiquitin 11 [Arabidopsis thaliana]
 gi|357512383|ref|XP_003626480.1| Ubiquitin-like protein [Medicago truncatula]
 gi|40287484|gb|AAR83856.1| hexameric polyubiquitin 6PU11 [Capsicum annuum]
 gi|147802377|emb|CAN77120.1| hypothetical protein VITISV_031666 [Vitis vinifera]
 gi|217074820|gb|ACJ85770.1| unknown [Medicago truncatula]
 gi|332657071|gb|AEE82471.1| ubiquitin 11 [Arabidopsis thaliana]
 gi|355501495|gb|AES82698.1| Ubiquitin-like protein [Medicago truncatula]
 gi|388491722|gb|AFK33927.1| unknown [Medicago truncatula]
 gi|388492650|gb|AFK34391.1| unknown [Lotus japonicus]
 gi|399513944|gb|AFP43342.1| polyubiquitin [Arabidopsis thaliana]
          Length = 153

 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 63/147 (42%), Positives = 88/147 (59%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   LA YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVL 147



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 87/147 (59%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHL 145



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 81/135 (60%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
              NI+ ES +HLV 
Sbjct: 133 ADYNIQKESTLHLVL 147



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 78/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  +  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTLADY +     + LV 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVL 147


>gi|149063233|gb|EDM13556.1| rCG21222, isoform CRA_b [Rattus norvegicus]
          Length = 179

 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 65/149 (43%), Positives = 90/149 (60%), Gaps = 3/149 (2%)

Query: 19  KEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVV 77
           +EGI  D   L FAG +LE GR L DY I+  STLH + +    M++FVK  T +T T+ 
Sbjct: 10  REGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL- 68

Query: 78  EAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPK 137
           E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV   +
Sbjct: 69  EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLR 127

Query: 138 EILSIFVKAATGEIVNLEVKHSFAIRDVK 166
             + IFVK  TG+ + L+V+ S   + VK
Sbjct: 128 GGMQIFVKTLTGKTITLDVEPSVNTKKVK 156



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 51/108 (47%), Positives = 70/108 (64%), Gaps = 3/108 (2%)

Query: 252 NQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTV 308
            Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+
Sbjct: 17  QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTI 76

Query: 309 QDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           ++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 77  ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 124



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 87/149 (58%), Gaps = 4/149 (2%)

Query: 95  KEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNL 154
           +EGI  DQ  L++ GK L ED  T++  NI+ ES +HLV   +  + IFVK  TG+ + L
Sbjct: 10  REGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL 68

Query: 155 EVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPS 211
           EV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+++ E  L +      
Sbjct: 69  EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 128

Query: 212 SIQIFVRTPIEEIVRLEVEVLIVVRDVKE 240
            +QIFV+T   + + L+VE  +  + VK+
Sbjct: 129 GMQIFVKTLTGKTITLDVEPSVNTKKVKQ 157



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 52/145 (35%), Positives = 79/145 (54%), Gaps = 6/145 (4%)

Query: 174 GVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVE 230
           G+      +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE
Sbjct: 12  GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 71

Query: 231 VLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQ 287
               + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    Q
Sbjct: 72  PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 131

Query: 288 IFVKTWGGKTITLDVQPYNTVQDVK 312
           IFVKT  GKTITLDV+P    + VK
Sbjct: 132 IFVKTLTGKTITLDVEPSVNTKKVK 156



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/77 (45%), Positives = 49/77 (63%), Gaps = 1/77 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 68  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 127

Query: 60  SEMKLFVKIPTNQTATV 76
             M++FVK  T +T T+
Sbjct: 128 GGMQIFVKTLTGKTITL 144



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 6/111 (5%)

Query: 322 PLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISIS 381
           P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S
Sbjct: 14  PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPS 73

Query: 382 EVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           +  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 74  DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 124


>gi|320162850|gb|EFW39749.1| polyubiquitin 5 [Capsaspora owczarzaki ATCC 30864]
          Length = 218

 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 89/147 (60%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + L+VE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITLDV+  +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/205 (36%), Positives = 101/205 (49%), Gaps = 26/205 (12%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T ++     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF-------CPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSV 172
           +  NI+ ES +HLV        CP E  S               K +  I D K    S 
Sbjct: 133 SDYNIQKESTLHLVLRLRGGAKCPFEGCS--------------AKTALVIGDCKYCKSSF 178

Query: 173 VGVSAADHIMIYEGKKLEDSKTLAF 197
            G           G  L+D +  AF
Sbjct: 179 CGTHRLAETHKCPG--LQDCRKQAF 201



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 89/147 (60%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-DVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 79/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITLDV+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|10719701|gb|AAG22093.1| ubiquitin [Scyliorhinus torazame]
          Length = 173

 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 64/167 (38%), Positives = 97/167 (58%), Gaps = 3/167 (1%)

Query: 43  DYGIRNNSTLHFLHQNL-SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSD 101
           DY I+  STLH + + L   M++FVK  T +T T  E  P  T++N+K  IQ KEGI  D
Sbjct: 5   DYNIQKXSTLHLVLRGLRGGMQIFVKTLTGKTITX-EVEPSDTIENVKAKIQXKEGIPPD 63

Query: 102 QFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFA 161
           Q  L++ GK L  D  T++  NI+ ES +HLV   +  + IFVK  TG+ +  EV+ S  
Sbjct: 64  QQRLIFAGKQLX-DGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITXEVEPSDT 122

Query: 162 IRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
           I +VKA +    G+      +I+ GK+LE+ +TL+ Y+++    L +
Sbjct: 123 IENVKAKIQXKEGIPPDQQRLIFAGKQLEEXRTLSDYNIQKXSTLHL 169



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/155 (38%), Positives = 87/155 (56%), Gaps = 3/155 (1%)

Query: 205 LLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEA 264
           +L      +QIFV+T   + +  EVE    + +VK  +     +    Q L +AG +L  
Sbjct: 17  VLRGLRGGMQIFVKTLTGKTITXEVEPSDTIENVKAKIQXKEGIPPDQQRLIFAGKQLXD 76

Query: 265 CKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQT 321
            +TL+ Y I+    L +   L    QIFVKT  GKTIT +V+P +T+++VK K+  K   
Sbjct: 77  GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITXEVEPSDTIENVKAKIQXKEGI 136

Query: 322 PLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           P   Q ++FAGK+L E   L+ YNIQK STLH+VL
Sbjct: 137 PPDQQRLIFAGKQLEEXRTLSDYNIQKXSTLHLVL 171



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/134 (44%), Positives = 81/134 (60%), Gaps = 3/134 (2%)

Query: 2   KVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLS 60
           +V+ S+ I+N+KA I  KEGI  D   L FAG +L  GR L DY I+  STLH + +   
Sbjct: 40  EVEPSDTIENVKAKIQXKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVLRLRG 99

Query: 61  EMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMT 120
            M++FVK  T +T T  E  P  T++N+K  IQ KEGI  DQ  L++ GK L E+  T++
Sbjct: 100 GMQIFVKTLTGKTIT-XEVEPSDTIENVKAKIQXKEGIPPDQQRLIFAGKQL-EEXRTLS 157

Query: 121 SMNIKSESIIHLVF 134
             NI+  S +HLV 
Sbjct: 158 DYNIQKXSTLHLVL 171



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 58/170 (34%), Positives = 86/170 (50%), Gaps = 10/170 (5%)

Query: 267 TLASYGIKN----NYVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTP 322
           T + Y I+     + VL  L    QIFVKT  GKTIT +V+P +T+++VK K+  K   P
Sbjct: 2   TXSDYNIQKXSTLHLVLRGLRGGMQIFVKTLTGKTITXEVEPSDTIENVKAKIQXKEGIP 61

Query: 323 LHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISE 382
              Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +I+  +  S+
Sbjct: 62  PDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITXEVEPSD 121

Query: 383 VKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
             E  K K Q         + L+     L++ RTL+DY +     + LV 
Sbjct: 122 TIENVKAKIQXKEGIPPDQQRLIFAGKQLEEXRTLSDYNIQKXSTLHLVL 171


>gi|307174680|gb|EFN65063.1| Ubiquitin [Camponotus floridanus]
          Length = 154

 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 89/147 (60%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 59/147 (40%), Positives = 89/147 (60%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHL 145



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 84/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 133 SDYNIQKESTLHLVL 147



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 79/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|294942504|ref|XP_002783557.1| Ubiquitin D, putative [Perkinsus marinus ATCC 50983]
 gi|239896054|gb|EER15353.1| Ubiquitin D, putative [Perkinsus marinus ATCC 50983]
          Length = 163

 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 89/147 (60%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + L+VE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITLDV+  +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/148 (40%), Positives = 91/148 (61%), Gaps = 4/148 (2%)

Query: 62  MKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMT 120
           M++FVK  T +T T+ VEA    T++N+K  IQ KEGI  DQ  L++ GK L ED  T++
Sbjct: 1   MQIFVKTLTGKTITLDVEA--SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLS 57

Query: 121 SMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADH 180
             NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+     
Sbjct: 58  DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQ 117

Query: 181 IMIYEGKKLEDSKTLAFYDMKDECLLEM 208
            +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 118 RLIFAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/151 (45%), Positives = 90/151 (59%), Gaps = 10/151 (6%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
             M++FVK  T +T T+ VEA    T++N+K  IQ KEGI  DQ  L++ GK L ED  T
Sbjct: 75  GGMQIFVKTLTGKTITLDVEA--SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 131

Query: 119 MTSMNIKSESIIHLVF-----CPKEILSIFV 144
           ++  NI+ ES +HLV      C   ILS  V
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGCLVSILSSVV 162



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 79/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITLDV+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|402471724|gb|EJW05300.1| polyubiquitin [Edhazardia aedis USNM 41457]
          Length = 153

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 89/147 (60%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + L+VE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITLDV+  +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 89/147 (60%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-DVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 60/135 (44%), Positives = 83/135 (61%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T ++     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 133 SDYNIQKESTLHLVL 147



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 79/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITLDV+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|92790162|emb|CAI83750.1| Polyubiqutin 4 [Isotricha prostoma]
          Length = 143

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/135 (44%), Positives = 83/135 (61%), Gaps = 3/135 (2%)

Query: 225 VRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV--- 281
           + L+VE    + +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   
Sbjct: 3   ITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 62

Query: 282 LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVL 341
           L    QIFVKT  GKTITLDV+P +T+++VK K+ DK   P   Q ++FAGK+L +N  L
Sbjct: 63  LRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTL 122

Query: 342 ARYNIQKHSTLHMVL 356
           A YNIQK STLH+VL
Sbjct: 123 ADYNIQKESTLHLVL 137



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/135 (44%), Positives = 82/135 (60%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I+N+KA I  KEGI  D   L FAG +LE  R L DY I+  STLH + +  
Sbjct: 5   LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLR 64

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T ++  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 65  GGMQIFVKTLTGKTIT-LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTL 122

Query: 120 TSMNIKSESIIHLVF 134
              NI+ ES +HLV 
Sbjct: 123 ADYNIQKESTLHLVL 137



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 52/133 (39%), Positives = 80/133 (60%), Gaps = 1/133 (0%)

Query: 76  VVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFC 135
            ++  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV  
Sbjct: 4   TLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNIQKESTLHLVLR 62

Query: 136 PKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTL 195
            +  + IFVK  TG+ + L+V+ S  I +VKA +    G+      +I+ GK+LED++TL
Sbjct: 63  LRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTL 122

Query: 196 AFYDMKDECLLEM 208
           A Y+++ E  L +
Sbjct: 123 ADYNIQKESTLHL 135



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/137 (38%), Positives = 75/137 (54%), Gaps = 6/137 (4%)

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITLDV+P +T+++VK K+ DK   P   Q ++FAGK+L +N  LA YNIQK STLH+V
Sbjct: 1   KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLV 60

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D+R
Sbjct: 61  LRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNR 120

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 121 TLADYNIQKESTLHLVL 137



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 71/131 (54%), Gaps = 3/131 (2%)

Query: 152 VNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM--- 208
           + L+V+ S  I +VKA +    G+      +I+ GK+LED++TLA Y+++ E  L +   
Sbjct: 3   ITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 62

Query: 209 FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTL 268
               +QIFV+T   + + L+VE    + +VK  + +   +    Q L +AG +LE  +TL
Sbjct: 63  LRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTL 122

Query: 269 ASYGIKNNYVL 279
           A Y I+    L
Sbjct: 123 ADYNIQKESTL 133


>gi|71020945|ref|XP_760703.1| hypothetical protein UM04556.1 [Ustilago maydis 521]
 gi|46100297|gb|EAK85530.1| hypothetical protein UM04556.1 [Ustilago maydis 521]
          Length = 286

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/154 (41%), Positives = 93/154 (60%), Gaps = 4/154 (2%)

Query: 206 LEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEAC 265
           L +F +S+QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  
Sbjct: 53  LHIF-TSMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDG 111

Query: 266 KTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTP 322
           +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P
Sbjct: 112 RTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 171

Query: 323 LHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
              Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 172 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 205



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/160 (38%), Positives = 93/160 (58%), Gaps = 4/160 (2%)

Query: 49  NSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYD 108
            +TLH      + M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ 
Sbjct: 48  GATLHL--HIFTSMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 104

Query: 109 GKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAI 168
           GK L ED  T++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA 
Sbjct: 105 GKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK 163

Query: 169 VGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +    G+      +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 164 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 203



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 82/135 (60%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 73  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 132

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 133 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 190

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 191 SDYNIQKESTLHLVL 205



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/149 (36%), Positives = 79/149 (53%), Gaps = 6/149 (4%)

Query: 284 SPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLAR 343
           +  QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ 
Sbjct: 57  TSMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 116

Query: 344 YNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKE 397
           YNIQK STLH+VL     +          +I+L +  S+  +  K K Q         + 
Sbjct: 117 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 176

Query: 398 LLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           L+     L+D RTL+DY +     + LV 
Sbjct: 177 LIFAGKQLEDGRTLSDYNIQKESTLHLVL 205


>gi|32400969|gb|AAP80690.1| polyubiquitin [Griffithsia japonica]
          Length = 195

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/161 (39%), Positives = 95/161 (59%), Gaps = 2/161 (1%)

Query: 48  NNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVY 107
           N+S LH  H     M++FVK  T +T T+ E     T++N+KT IQ KEGI  DQ  L++
Sbjct: 29  NSSHLHPKHTLFIVMQIFVKTLTGKTITL-EVESSDTIENVKTKIQDKEGIPPDQQRLIF 87

Query: 108 DGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKA 167
            GK L ED  T++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK 
Sbjct: 88  AGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKT 146

Query: 168 IVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
            +    G+      +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 147 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 187



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 89/147 (60%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 43  MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 102

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++
Sbjct: 103 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLI 162

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 163 FAGKQLEDGRTLSDYNIQKESTLHLVL 189



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 84/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 57  LEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 116

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T++N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 117 GGMQIFVKTLTGKTIT-LEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 174

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 175 SDYNIQKESTLHLVL 189



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 79/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 43  MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 102

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 103 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLI 162

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 163 FAGKQLEDGRTLSDYNIQKESTLHLVL 189


>gi|73747822|gb|AAZ82816.1| ubiquitin monomer protein [Morus mongolica]
          Length = 152

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 62/147 (42%), Positives = 88/147 (59%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   LA YNIQK STLH+V+
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVI 147



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 87/147 (59%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHL 145



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 81/135 (60%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
              NI+ ES +HLV 
Sbjct: 133 ADYNIQKESTLHLVI 147



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 54/135 (40%), Positives = 74/135 (54%), Gaps = 6/135 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  +  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADY 414
                L+D RTLADY
Sbjct: 121 FAGKQLEDGRTLADY 135


>gi|164510220|emb|CAJ41450.1| ubiquitin [Alvinella caudata]
          Length = 152

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 87/147 (59%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL  Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEASDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLGDYN 60

Query: 273 IKNNYVLDVLP---SPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L ++P      QIFVKT  GKTITL+V+  + +++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVPRLRGGMQIFVKTLTGKTITLEVEASDNIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L  YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLGDYNIQKESTLHLVL 147



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 58/147 (39%), Positives = 86/147 (58%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E      ++N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVEASDNIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLGD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVPRLRGGMQIFVKTLTGKTITLEVEASDNIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL  Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLGDYNIQKESTLHL 145



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/135 (44%), Positives = 82/135 (60%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEASDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLGDYNIQKESTLHLVPRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E      ++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEASDNIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
              NI+ ES +HLV 
Sbjct: 133 GDYNIQKESTLHLVL 147



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 77/143 (53%), Gaps = 3/143 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL  Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEASDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLGDYN 60

Query: 200 MKDECLLEMFP---SSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L + P     +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVPRLRGGMQIFVKTLTGKTITLEVEASDNIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVL 279
           +AG +LE  +TL  Y I+    L
Sbjct: 121 FAGKQLEDGRTLGDYNIQKESTL 143



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/147 (36%), Positives = 75/147 (51%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  + +++VK K+ DK   P   Q ++FAGK+L +   L  YN
Sbjct: 1   MQIFVKTLTGKTITLEVEASDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLGDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+V      +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVPRLRGGMQIFVKTLTGKTITLEVEASDNIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLGDYNIQKESTLHLVL 147


>gi|90075190|dbj|BAE87275.1| unnamed protein product [Macaca fascicularis]
          Length = 157

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 89/147 (60%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P + +++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDIIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 90/147 (61%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDIIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHL 145



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 84/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P   ++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDIIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 133 SDYNIQKESTLHLVL 147



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 81/147 (55%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S++ E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDIIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|357132045|ref|XP_003567643.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like [Brachypodium
           distachyon]
          Length = 218

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 62/147 (42%), Positives = 88/147 (59%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    +  VK  + +   +    Q L +AG +L+  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESRDTIDSVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L +  QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRAKMQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   LA YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVL 147



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 58/147 (39%), Positives = 87/147 (59%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ ++K  IQ KEGI  DQ  L++ GK L +D  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESRDTIDSVKAKIQDKEGIPPDQQRLIFAGKQL-DDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRAKMQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHL 145



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 57/135 (42%), Positives = 81/135 (60%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+  + I ++KA I  KEGI  D   L FAG +L+ GR L DY I+  STLH + +  
Sbjct: 15  LEVESRDTIDSVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
           ++M++FVK  T +T T +E     T+ N+K  I  KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  AKMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIHDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
              NI+ ES +HLV 
Sbjct: 133 ADYNIQKESTLHLVL 147



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 78/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+  VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVESRDTIDSVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL   +++          +I+L +  S+  +  K K           + L+
Sbjct: 61  IQKESTLHLVLRLRAKMQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTLADY +     + LV 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVL 147



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 77/143 (53%), Gaps = 3/143 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+    I  VKA +    G+      +I+ GK+L+D +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESRDTIDSVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +     + +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRAKMQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVL 279
           +AG +LE  +TLA Y I+    L
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTL 143


>gi|123454695|ref|XP_001315099.1| polyubiquitin [Trichomonas vaginalis G3]
 gi|121897765|gb|EAY02876.1| polyubiquitin, putative [Trichomonas vaginalis G3]
          Length = 153

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/147 (42%), Positives = 88/147 (59%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + DVK  + +  D+    Q L +AG +LE   TL  Y 
Sbjct: 1   MQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEDIPPDQQRLIFAGKQLEDGNTLQDYS 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+ +  L +   L    QIFVKT  GK ITL+V+P + ++DVK K+ DK   P   Q ++
Sbjct: 61  IQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEDIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L + + L  Y+IQK STLH+VL
Sbjct: 121 FAGKQLEDGNTLQDYSIQKDSTLHLVL 147



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 82/147 (55%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +  T+ E  P   ++++K  IQ KE I  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKHITL-EVEPTDRIEDVKAKIQDKEDIPPDQQRLIFAGKQL-EDGNTLQD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            +I+ +S +HLV   +  + IFVK  TG+ + LEV+ +  I DVKA +     +      
Sbjct: 59  YSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEDIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED  TL  Y ++ +  L +
Sbjct: 119 LIFAGKQLEDGNTLQDYSIQKDSTLHL 145



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/135 (38%), Positives = 80/135 (59%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ ++ I+++KA I  KE I  D   L FAG +LE G  L DY I+ +STLH + +  
Sbjct: 15  LEVEPTDRIEDVKAKIQDKEDIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +  T +E  P   ++++K  IQ KE I  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKHIT-LEVEPTDRIEDVKAKIQDKEDIPPDQQRLIFAGKQL-EDGNTL 132

Query: 120 TSMNIKSESIIHLVF 134
              +I+ +S +HLV 
Sbjct: 133 QDYSIQKDSTLHLVL 147



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 75/147 (51%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GK ITL+V+P + ++DVK K+ DK   P   Q ++FAGK+L + + L  Y+
Sbjct: 1   MQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEDIPPDQQRLIFAGKQLEDGNTLQDYS 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +           I+L +  ++  E  K K Q         + L+
Sbjct: 61  IQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEDIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D  TL DY +     + LV 
Sbjct: 121 FAGKQLEDGNTLQDYSIQKDSTLHLVL 147


>gi|385881402|gb|AFI98422.1| polyubiquitin-B, partial [Antricola delacruzi]
          Length = 156

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/150 (41%), Positives = 90/150 (60%), Gaps = 4/150 (2%)

Query: 211 SSIQIFVRTPIEEIVRLEVEVLI-VVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLA 269
             +QIFV+T   + + LEVE     + +VK  + +   +    Q L +AG +LE  +TL+
Sbjct: 1   GGMQIFVKTLTGKTITLEVEPGSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 60

Query: 270 SYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQ 326
            Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q
Sbjct: 61  DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 120

Query: 327 SIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
            ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 RLIFAGKQLEDGRTLSDYNIQKESTLHLVL 150



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 58/147 (39%), Positives = 88/147 (59%), Gaps = 1/147 (0%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+       T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 3   MQIFVKTLTGKTITLEVEPGSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 61

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 62  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 121

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 122 LIFAGKQLEDGRTLSDYNIQKESTLHL 148



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 61/130 (46%), Positives = 81/130 (62%), Gaps = 3/130 (2%)

Query: 6   SEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKL 64
           S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +    M++
Sbjct: 23  SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 82

Query: 65  FVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNI 124
           FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++  NI
Sbjct: 83  FVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNI 140

Query: 125 KSESIIHLVF 134
           + ES +HLV 
Sbjct: 141 QKESTLHLVL 150



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/148 (37%), Positives = 80/148 (54%), Gaps = 7/148 (4%)

Query: 286 FQIFVKTWGGKTITLDVQP-YNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARY 344
            QIFVKT  GKTITL+V+P  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ Y
Sbjct: 3   MQIFVKTLTGKTITLEVEPGSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 62

Query: 345 NIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKEL 398
           NIQK STLH+VL     +          +I+L +  S+  E  K K Q         + L
Sbjct: 63  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 122

Query: 399 LVDQVALQDDRTLADYGMDLSEKVVLVF 426
           +     L+D RTL+DY +     + LV 
Sbjct: 123 IFAGKQLEDGRTLSDYNIQKESTLHLVL 150



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 94  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 149


>gi|61889379|emb|CAI51312.2| polyubiquitin [Capsicum chinense]
          Length = 153

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/147 (42%), Positives = 88/147 (59%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDVL---PSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L ++       QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRFRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   LA YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVL 147



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 87/147 (59%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRFRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHL 145



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 81/135 (60%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRFR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
              NI+ ES +HLV 
Sbjct: 133 ADYNIQKESTLHLVL 147



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 78/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  +  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRFRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTLADY +     + LV 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVL 147



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 79/143 (55%), Gaps = 3/143 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +   F   +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRFRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVL 279
           +AG +LE  +TLA Y I+    L
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTL 143


>gi|290979754|ref|XP_002672598.1| polyubiquitin [Naegleria gruberi]
 gi|284086176|gb|EFC39854.1| polyubiquitin [Naegleria gruberi]
          Length = 154

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 61/148 (41%), Positives = 90/148 (60%), Gaps = 4/148 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKN----NYVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSI 328
           I+     + VL +     QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q +
Sbjct: 61  IQKESTLHLVLRLRGGGMQIFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRL 120

Query: 329 VFAGKRLFENHVLARYNIQKHSTLHMVL 356
           +FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 IFAGKQLEDGRTLSDYNIQKESTLHLVL 148



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/136 (44%), Positives = 84/136 (61%), Gaps = 4/136 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHF-LHQN 58
           ++V+ ++ I+N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH  L   
Sbjct: 15  LEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 59  LSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
              M++FVK  T +T T +E     T++N+K+ IQ KEGI  DQ  L++ GK L ED  T
Sbjct: 75  GGGMQIFVKTLTGKTIT-LEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRT 132

Query: 119 MTSMNIKSESIIHLVF 134
           ++  NI+ ES +HLV 
Sbjct: 133 LSDYNIQKESTLHLVL 148



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 54/148 (36%), Positives = 82/148 (55%), Gaps = 7/148 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPL-IFIDPSISLSISISEVKEMAKVKFQAA------VKEL 398
           IQK STLH+VL      +++ +      +I+L +  ++  E  K K Q         + L
Sbjct: 61  IQKESTLHLVLRLRGGGMQIFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRL 120

Query: 399 LVDQVALQDDRTLADYGMDLSEKVVLVF 426
           +     L+D RTL+DY +     + LV 
Sbjct: 121 IFAGKQLEDGRTLSDYNIQKESTLHLVL 148



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 79/144 (54%), Gaps = 4/144 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ +  I +VK+ +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDEC----LLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDL 255
           ++ E     +L +    +QIFV+T   + + LEVE    + +VK  + +   +    Q L
Sbjct: 61  IQKESTLHLVLRLRGGGMQIFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRL 120

Query: 256 FYAGTKLEACKTLASYGIKNNYVL 279
            +AG +LE  +TL+ Y I+    L
Sbjct: 121 IFAGKQLEDGRTLSDYNIQKESTL 144


>gi|239788927|dbj|BAH71116.1| ACYPI006410 [Acyrthosiphon pisum]
          Length = 154

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 89/147 (60%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +++++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 58/147 (39%), Positives = 90/147 (61%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     +++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S +I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/135 (44%), Positives = 84/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     +++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 133 SDYNIQKESTLHLVL 147



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 79/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +++++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|2209091|gb|AAB61405.1| ubiquitin [Tetrahymena vorax]
          Length = 153

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 88/147 (59%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + L+VE    + +VK  + +   +    Q L +AG +LE   TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGITLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITLDV+  +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/148 (40%), Positives = 91/148 (61%), Gaps = 4/148 (2%)

Query: 62  MKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMT 120
           M++FVK  T +T T+ VEA    T++N+K  IQ KEGI  DQ  L++ GK L ED  T++
Sbjct: 1   MQIFVKTLTGKTITLDVEA--SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGITLS 57

Query: 121 SMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADH 180
             NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+     
Sbjct: 58  DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQ 117

Query: 181 IMIYEGKKLEDSKTLAFYDMKDECLLEM 208
            +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 118 RLIFAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/136 (45%), Positives = 84/136 (61%), Gaps = 5/136 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAG-RLVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I+N+KA I  KEGI  D   L FAG +LE G  L DY I+  STLH + +  
Sbjct: 15  LDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGITLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
             M++FVK  T +T T+ VEA    T++N+K  IQ KEGI  DQ  L++ GK L ED  T
Sbjct: 75  GGMQIFVKTLTGKTITLDVEA--SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 131

Query: 119 MTSMNIKSESIIHLVF 134
           ++  NI+ ES +HLV 
Sbjct: 132 LSDYNIQKESTLHLVL 147



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 79/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITLDV+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGITLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|363756558|ref|XP_003648495.1| hypothetical protein Ecym_8408 [Eremothecium cymbalariae
           DBVPG#7215]
 gi|356891695|gb|AET41678.1| Hypothetical protein Ecym_8408 [Eremothecium cymbalariae
           DBVPG#7215]
          Length = 153

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 88/147 (59%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 58/147 (39%), Positives = 89/147 (60%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 60/135 (44%), Positives = 83/135 (61%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 133 SDYNIQKESTLHLVL 147



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 78/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  +  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|4589760|dbj|BAA76889.1| ubiquitin [Trichophyton mentagrophytes]
 gi|6539532|dbj|BAA88168.1| ubiquitin [Arthroderma otae]
          Length = 153

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 88/147 (59%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 59/147 (40%), Positives = 88/147 (59%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 82/135 (60%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 133 SDYNIQKESTLHLVL 147



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 78/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  +  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|443900281|dbj|GAC77607.1| ubiquitin and ubiquitin-like proteins [Pseudozyma antarctica T-34]
          Length = 228

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 88/147 (59%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/147 (40%), Positives = 88/147 (59%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 82/135 (60%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 133 SDYNIQKESTLHLVL 147



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 78/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  +  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|164661299|ref|XP_001731772.1| hypothetical protein MGL_1040 [Malassezia globosa CBS 7966]
 gi|159105673|gb|EDP44558.1| hypothetical protein MGL_1040 [Malassezia globosa CBS 7966]
          Length = 154

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 88/147 (59%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 59/147 (40%), Positives = 88/147 (59%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 82/135 (60%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 133 SDYNIQKESTLHLVL 147



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 78/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  +  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|239799385|dbj|BAH70616.1| ACYPI007765 [Acyrthosiphon pisum]
          Length = 153

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 89/147 (60%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +++++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 58/147 (39%), Positives = 90/147 (61%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     +++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S +I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 60/135 (44%), Positives = 84/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     +++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 133 SDYNIQKESTLHLVL 147



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 79/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +++++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|384495224|gb|EIE85715.1| polyubiquitin [Rhizopus delemar RA 99-880]
          Length = 230

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 89/147 (60%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK+ + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 88/147 (59%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     ++ N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/135 (44%), Positives = 82/135 (60%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 133 SDYNIQKESTLHLVL 147



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/147 (36%), Positives = 78/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +++ +VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  +  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|238580222|ref|XP_002389222.1| hypothetical protein MPER_11681 [Moniliophthora perniciosa FA553]
 gi|215451253|gb|EEB90152.1| hypothetical protein MPER_11681 [Moniliophthora perniciosa FA553]
          Length = 153

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 88/147 (59%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 59/147 (40%), Positives = 88/147 (59%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 82/135 (60%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 133 SDYNIQKESTLHLVL 147



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 78/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  +  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|365759560|gb|EHN01342.1| Ubi4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
 gi|392297682|gb|EIW08781.1| Ubi4p [Saccharomyces cerevisiae CEN.PK113-7D]
          Length = 153

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 88/147 (59%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 58/147 (39%), Positives = 89/147 (60%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 60/135 (44%), Positives = 83/135 (61%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 133 SDYNIQKESTLHLVL 147



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 78/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  +  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|384497521|gb|EIE88012.1| polyubiquitin [Rhizopus delemar RA 99-880]
          Length = 231

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 89/147 (60%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK+ + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 88/147 (59%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     ++ N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/135 (44%), Positives = 82/135 (60%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 133 SDYNIQKESTLHLVL 147



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/147 (36%), Positives = 78/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +++ +VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELL 399
           IQK STLH+VL     +          +I+L +  S+  +  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|367006115|ref|XP_003687789.1| hypothetical protein TPHA_0K02250 [Tetrapisispora phaffii CBS 4417]
 gi|357526094|emb|CCE65355.1| hypothetical protein TPHA_0K02250 [Tetrapisispora phaffii CBS 4417]
          Length = 153

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 88/147 (59%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 58/147 (39%), Positives = 89/147 (60%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 60/135 (44%), Positives = 83/135 (61%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 133 SDYNIQKESTLHLVL 147



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 78/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  +  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|242074418|ref|XP_002447145.1| hypothetical protein SORBIDRAFT_06g029360 [Sorghum bicolor]
 gi|241938328|gb|EES11473.1| hypothetical protein SORBIDRAFT_06g029360 [Sorghum bicolor]
          Length = 153

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 88/147 (59%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +L+  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GK+ITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKSITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   LA YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVL 147



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/147 (40%), Positives = 87/147 (59%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L +D  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-DDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKSITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHL 145



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/135 (43%), Positives = 81/135 (60%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +L+ GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T ++ T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKSIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
              NI+ ES +HLV 
Sbjct: 133 ADYNIQKESTLHLVL 147



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 78/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          SI+L +  S+  +  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKSITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTLADY +     + LV 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVL 147


>gi|403217874|emb|CCK72367.1| hypothetical protein KNAG_0J02880 [Kazachstania naganishii CBS
           8797]
          Length = 153

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 88/147 (59%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 58/147 (39%), Positives = 89/147 (60%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 60/135 (44%), Positives = 83/135 (61%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 133 SDYNIQKESTLHLVL 147



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 78/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  +  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|388857763|emb|CCF48657.1| probable polyubiquitin [Ustilago hordei]
          Length = 228

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 88/147 (59%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 89/147 (60%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T+ N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 82/135 (60%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 133 SDYNIQKESTLHLVL 147



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 79/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  +  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|60598636|gb|AAX25867.1| unknown [Schistosoma japonicum]
          Length = 183

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 64/161 (39%), Positives = 92/161 (57%), Gaps = 5/161 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M +FVK  T  T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MHIFVKTLTGNTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK +TG+ + LEV+ S  I +VKA +    G+    H 
Sbjct: 59  YNIQKESTLHLVLRLRGGMHIFVKTSTGKTITLEVEPSDTIENVKAKIQDKEGIPPVQHR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRT 219
           +I  GK+ ED +T + Y ++ E  L +       +QIFV T
Sbjct: 119 LISAGKQSEDGRTSSDYTIQKESTLHLVLRLRGGMQIFVNT 159



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 64/153 (41%), Positives = 87/153 (56%), Gaps = 3/153 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M +FVK  T +T T +E  P  T++N+K  IQ KEGI   Q  L+  GK   ED  T 
Sbjct: 75  GGMHIFVKTSTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPVQHRLISAGK-QSEDGRTS 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIV 152
           +   I+ ES +HLV   +  + IFV   TG+  
Sbjct: 133 SDYTIQKESTLHLVLRLRGGMQIFVNTLTGKTT 165



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 82/147 (55%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           + IFV+T     + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MHIFVKTLTGNTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L     IFVKT  GKTITL+V+P +T+++VK K+ DK   P     ++
Sbjct: 61  IQKESTLHLVLRLRGGMHIFVKTSTGKTITLEVEPSDTIENVKAKIQDKEGIPPVQHRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
            AGK+  +    + Y IQK STLH+VL
Sbjct: 121 SAGKQSEDGRTSSDYTIQKESTLHLVL 147



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 81/151 (53%), Gaps = 14/151 (9%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
             IFVKT  G TITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MHIFVKTLTGNTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPS----ISLSISISEVKEMAKVKFQ-----AAVK 396
           IQK STLH+VL    R+     IF+  S    I+L +  S+  E  K K Q       V+
Sbjct: 61  IQKESTLHLVL----RLRGGMHIFVKTSTGKTITLEVEPSDTIENVKAKIQDKEGIPPVQ 116

Query: 397 ELLVDQVALQDD-RTLADYGMDLSEKVVLVF 426
             L+      +D RT +DY +     + LV 
Sbjct: 117 HRLISAGKQSEDGRTSSDYTIQKESTLHLVL 147


>gi|145498050|ref|XP_001435013.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124402142|emb|CAK67616.1| unnamed protein product [Paramecium tetraurelia]
          Length = 153

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 86/147 (58%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + L+VE    +  VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GK ITLDV+P +T+  VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKNITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 87/147 (59%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +  P  T+  +K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-DVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I  VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKNITLDVEPSDTIDAVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 58/135 (42%), Positives = 79/135 (58%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I  +KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +  T ++  P  T+  +K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKNIT-LDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 133 SDYNIQKESTLHLVL 147



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 78/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITLDV+P +T+  VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  +  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKNITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|403284846|ref|XP_003933763.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like isoform 3
           [Saimiri boliviensis boliviensis]
          Length = 153

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 63/135 (46%), Positives = 86/135 (63%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ IKN+KA I  KEGI  D   L FA  +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIKNVKAKIQDKEGIPPDQQRLIFARKQLEDGRNLSDYNIQKESTLHLILRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T++T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTSKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ESI+HLV 
Sbjct: 133 SDYNIQKESILHLVL 147



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 85/145 (58%), Gaps = 3/145 (2%)

Query: 215 IFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIK 274
           IF++T   + + LEVE    +++VK  + +   +    Q L +A  +LE  + L+ Y I+
Sbjct: 3   IFLKTLTSKTITLEVEPSDTIKNVKAKIQDKEGIPPDQQRLIFARKQLEDGRNLSDYNIQ 62

Query: 275 NNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFA 331
               L +   L    QIFVKT   KTITL+V+P +T+++VK K+ DK   P   Q ++FA
Sbjct: 63  KESTLHLILRLRGGMQIFVKTLTSKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 122

Query: 332 GKRLFENHVLARYNIQKHSTLHMVL 356
           GK+L +   L+ YNIQK S LH+VL
Sbjct: 123 GKQLEDGRTLSDYNIQKESILHLVL 147



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 88/147 (59%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M +F+K  T++T T+ E  P  T++N+K  IQ KEGI  DQ  L++  K L ED   ++ 
Sbjct: 1   MLIFLKTLTSKTITL-EVEPSDTIKNVKAKIQDKEGIPPDQQRLIFARKQL-EDGRNLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HL+   +  + IFVK  T + + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLILRLRGGMQIFVKTLTSKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E +L +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESILHL 145



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 74/135 (54%), Gaps = 6/135 (4%)

Query: 288 IFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQ 347
           IF+KT   KTITL+V+P +T+++VK K+ DK   P   Q ++FA K+L +   L+ YNIQ
Sbjct: 3   IFLKTLTSKTITLEVEPSDTIKNVKAKIQDKEGIPPDQQRLIFARKQLEDGRNLSDYNIQ 62

Query: 348 KHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVD 401
           K STLH++L     +          +I+L +  S+  E  K K Q         + L+  
Sbjct: 63  KESTLHLILRLRGGMQIFVKTLTSKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 122

Query: 402 QVALQDDRTLADYGM 416
              L+D RTL+DY +
Sbjct: 123 GKQLEDGRTLSDYNI 137



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 76/141 (53%), Gaps = 3/141 (2%)

Query: 142 IFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMK 201
           IF+K  T + + LEV+ S  I++VKA +    G+      +I+  K+LED + L+ Y+++
Sbjct: 3   IFLKTLTSKTITLEVEPSDTIKNVKAKIQDKEGIPPDQQRLIFARKQLEDGRNLSDYNIQ 62

Query: 202 DECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYA 258
            E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L +A
Sbjct: 63  KESTLHLILRLRGGMQIFVKTLTSKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 122

Query: 259 GTKLEACKTLASYGIKNNYVL 279
           G +LE  +TL+ Y I+   +L
Sbjct: 123 GKQLEDGRTLSDYNIQKESIL 143


>gi|403284842|ref|XP_003933761.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 153

 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 63/135 (46%), Positives = 86/135 (63%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ IKN+KA I  KEGI  D   L FA  +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIKNVKAKIQDKEGIPPDQQRLIFARKQLEDGRNLSDYNIQKESTLHLILRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T++T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTSKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ESI+HLV 
Sbjct: 133 SDYNIQKESILHLVL 147



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 87/147 (59%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIF++T   + + LEVE    +++VK  + +   +    Q L +A  +LE  + L+ Y 
Sbjct: 1   MQIFLKTLTSKTITLEVEPSDTIKNVKAKIQDKEGIPPDQQRLIFARKQLEDGRNLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT   KTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLILRLRGGMQIFVKTLTSKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK S LH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESILHLVL 147



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 89/147 (60%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++F+K  T++T T+ E  P  T++N+K  IQ KEGI  DQ  L++  K L ED   ++ 
Sbjct: 1   MQIFLKTLTSKTITL-EVEPSDTIKNVKAKIQDKEGIPPDQQRLIFARKQL-EDGRNLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HL+   +  + IFVK  T + + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLILRLRGGMQIFVKTLTSKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E +L +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESILHL 145



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 50/137 (36%), Positives = 75/137 (54%), Gaps = 6/137 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIF+KT   KTITL+V+P +T+++VK K+ DK   P   Q ++FA K+L +   L+ YN
Sbjct: 1   MQIFLKTLTSKTITLEVEPSDTIKNVKAKIQDKEGIPPDQQRLIFARKQLEDGRNLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH++L     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLILRLRGGMQIFVKTLTSKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGM 416
                L+D RTL+DY +
Sbjct: 121 FAGKQLEDGRTLSDYNI 137


>gi|388516797|gb|AFK46460.1| unknown [Medicago truncatula]
          Length = 153

 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 62/147 (42%), Positives = 87/147 (59%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   LA YNIQK  TLH+VL
Sbjct: 121 FAGKQLEDGRTLADYNIQKEFTLHLVL 147



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 87/147 (59%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKEFTLHL 145



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/135 (44%), Positives = 80/135 (59%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
              NI+ E  +HLV 
Sbjct: 133 ADYNIQKEFTLHLVL 147



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 54/135 (40%), Positives = 74/135 (54%), Gaps = 6/135 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  +  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADY 414
                L+D RTLADY
Sbjct: 121 FAGKQLEDGRTLADY 135


>gi|397527146|ref|XP_003833462.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-like [Pan paniscus]
          Length = 153

 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 89/147 (60%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   +I+ LEVE    + +VK  + +        Q L +AG +LE   +L+ Y 
Sbjct: 1   MQIFVKTLTGKIITLEVEPSATIENVKAKIQDKEGNPHDQQKLIFAGKQLEDGCSLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ D+   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDEEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ Y+IQK STLH+VL
Sbjct: 121 FAGKKLEDGRTLSDYSIQKESTLHLVL 147



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 58/147 (39%), Positives = 87/147 (59%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +  T+ E  P  T++N+K  IQ KEG   DQ  L++ GK L ED  +++ 
Sbjct: 1   MQIFVKTLTGKIITL-EVEPSATIENVKAKIQDKEGNPHDQQKLIFAGKQL-EDGCSLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDEEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GKKLED +TL+ Y ++ E  L +
Sbjct: 119 LIFAGKKLEDGRTLSDYSIQKESTLHL 145



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/135 (42%), Positives = 82/135 (60%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAG-RLVDYGIRNNSTLHFLHQNL 59
           ++V+ S  I+N+KA I  KEG   D   L FAG +LE G  L DY I+  STLH + +  
Sbjct: 15  LEVEPSATIENVKAKIQDKEGNPHDQQKLIFAGKQLEDGCSLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ +EGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDEEGIPPDQQRLIFAGKKL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
           +  +I+ ES +HLV 
Sbjct: 133 SDYSIQKESTLHLVL 147



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 78/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GK ITL+V+P  T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKIITLEVEPSATIENVKAKIQDKEGNPHDQQKLIFAGKQLEDGCSLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDEEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKKLEDGRTLSDYSIQKESTLHLVL 147


>gi|283245864|gb|ABH10622.2| ubiquitin [Nicotiana tabacum]
          Length = 143

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/143 (42%), Positives = 84/143 (58%), Gaps = 3/143 (2%)

Query: 214 QIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGI 273
           QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y I
Sbjct: 1   QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 60

Query: 274 KNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVF 330
           +    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++F
Sbjct: 61  QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 120

Query: 331 AGKRLFENHVLARYNIQKHSTLH 353
           AGK+L +   LA YNIQK STLH
Sbjct: 121 AGKQLEDGRTLADYNIQKESTLH 143



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 59/144 (40%), Positives = 85/144 (59%), Gaps = 2/144 (1%)

Query: 63  KLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSM 122
           ++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+   
Sbjct: 1   QIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADY 58

Query: 123 NIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIM 182
           NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      +
Sbjct: 59  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 118

Query: 183 IYEGKKLEDSKTLAFYDMKDECLL 206
           I+ GK+LED +TLA Y+++ E  L
Sbjct: 119 IFAGKQLEDGRTLADYNIQKESTL 142



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 59/132 (44%), Positives = 79/132 (59%), Gaps = 3/132 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 14  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 73

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 74  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 131

Query: 120 TSMNIKSESIIH 131
              NI+ ES +H
Sbjct: 132 ADYNIQKESTLH 143



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 54/136 (39%), Positives = 75/136 (55%), Gaps = 6/136 (4%)

Query: 287 QIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNI 346
           QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNI
Sbjct: 1   QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 60

Query: 347 QKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLV 400
           QK STLH+VL     +          +I+L +  S+  +  K K Q         + L+ 
Sbjct: 61  QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 120

Query: 401 DQVALQDDRTLADYGM 416
               L+D RTLADY +
Sbjct: 121 AGKQLEDGRTLADYNI 136



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 77/141 (54%), Gaps = 3/141 (2%)

Query: 142 IFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMK 201
           IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+++
Sbjct: 2   IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 61

Query: 202 DECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYA 258
            E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L +A
Sbjct: 62  KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 121

Query: 259 GTKLEACKTLASYGIKNNYVL 279
           G +LE  +TLA Y I+    L
Sbjct: 122 GKQLEDGRTLADYNIQKESTL 142


>gi|27734387|gb|AAM51222.1| polyubiquitin [Euglypha rotunda]
          Length = 177

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/172 (41%), Positives = 102/172 (59%), Gaps = 9/172 (5%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL--HQ 57
           + V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY +   +TLH +   +
Sbjct: 8   LDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNVTKEATLHLVLRLR 67

Query: 58  NLSEMKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDT 116
             S M++FVK  T +T T+ VEA    T++N+K  IQ KEGI  DQ  L++ GK L ED 
Sbjct: 68  GGSGMQIFVKTLTGKTITLDVEA--SDTIENVKQKIQDKEGIPPDQQRLIFAGKQL-EDG 124

Query: 117 ATMTSMNIKSESIIHLVFCPK--EILSIFVKAATGEIVNLEVKHSFAIRDVK 166
            T++  N+  E+ +HLV   +    + IFVK  TG+ + L+V+ S  I +VK
Sbjct: 125 RTLSDYNVTKEATLHLVLRLRGGSGMQIFVKTLTGKTITLDVEASDTIENVK 176



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/175 (33%), Positives = 97/175 (55%), Gaps = 10/175 (5%)

Query: 148 TGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLE 207
           TG+ + L+V+ S  I +VK  +    G+      +I+ GK+LED +TL+ Y++  E  L 
Sbjct: 2   TGKTITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNVTKEATLH 61

Query: 208 MF-----PSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKL 262
           +       S +QIFV+T   + + L+VE    + +VK+ + +   +    Q L +AG +L
Sbjct: 62  LVLRLRGGSGMQIFVKTLTGKTITLDVEASDTIENVKQKIQDKEGIPPDQQRLIFAGKQL 121

Query: 263 EACKTLASYGIKNNYVLDVL-----PSPFQIFVKTWGGKTITLDVQPYNTVQDVK 312
           E  +TL+ Y +     L ++      S  QIFVKT  GKTITLDV+  +T+++VK
Sbjct: 122 EDGRTLSDYNVTKEATLHLVLRLRGGSGMQIFVKTLTGKTITLDVEASDTIENVK 176



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 58/164 (35%), Positives = 93/164 (56%), Gaps = 8/164 (4%)

Query: 84  TVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPK--EILS 141
           T++N+K  IQ KEGI  DQ  L++ GK L ED  T++  N+  E+ +HLV   +    + 
Sbjct: 15  TIENVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNVTKEATLHLVLRLRGGSGMQ 73

Query: 142 IFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMK 201
           IFVK  TG+ + L+V+ S  I +VK  +    G+      +I+ GK+LED +TL+ Y++ 
Sbjct: 74  IFVKTLTGKTITLDVEASDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNVT 133

Query: 202 DECLLEMF-----PSSIQIFVRTPIEEIVRLEVEVLIVVRDVKE 240
            E  L +       S +QIFV+T   + + L+VE    + +VK+
Sbjct: 134 KEATLHLVLRLRGGSGMQIFVKTLTGKTITLDVEASDTIENVKQ 177



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/137 (37%), Positives = 81/137 (59%), Gaps = 5/137 (3%)

Query: 225 VRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVL-- 282
           + L+VE    + +VK+ + +   +    Q L +AG +LE  +TL+ Y +     L ++  
Sbjct: 6   ITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNVTKEATLHLVLR 65

Query: 283 ---PSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENH 339
               S  QIFVKT  GKTITLDV+  +T+++VK K+ DK   P   Q ++FAGK+L +  
Sbjct: 66  LRGGSGMQIFVKTLTGKTITLDVEASDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGR 125

Query: 340 VLARYNIQKHSTLHMVL 356
            L+ YN+ K +TLH+VL
Sbjct: 126 TLSDYNVTKEATLHLVL 142



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 69/128 (53%), Gaps = 8/128 (6%)

Query: 295 GKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHM 354
           GKTITLDV+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN+ K +TLH+
Sbjct: 3   GKTITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNVTKEATLHL 62

Query: 355 V--LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQ 406
           V  L   S +          +I+L +  S+  E  K K Q         + L+     L+
Sbjct: 63  VLRLRGGSGMQIFVKTLTGKTITLDVEASDTIENVKQKIQDKEGIPPDQQRLIFAGKQLE 122

Query: 407 DDRTLADY 414
           D RTL+DY
Sbjct: 123 DGRTLSDY 130


>gi|223646258|gb|ACN09887.1| Ubiquitin [Salmo salar]
 gi|223672105|gb|ACN12234.1| Ubiquitin [Salmo salar]
          Length = 191

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/135 (45%), Positives = 85/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 53  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 112

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 113 GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 170

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 171 SDYNIQKESTLHLVL 185



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/135 (42%), Positives = 82/135 (60%), Gaps = 3/135 (2%)

Query: 225 VRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV--- 281
           + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   
Sbjct: 51  ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 110

Query: 282 LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVL 341
           L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L
Sbjct: 111 LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 170

Query: 342 ARYNIQKHSTLHMVL 356
           + YNIQK STLH+VL
Sbjct: 171 SDYNIQKESTLHLVL 185



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 56/139 (40%), Positives = 84/139 (60%), Gaps = 2/139 (1%)

Query: 70  TNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESI 129
           T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES 
Sbjct: 47  TGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKEST 104

Query: 130 IHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKL 189
           +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+L
Sbjct: 105 LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 164

Query: 190 EDSKTLAFYDMKDECLLEM 208
           ED +TL+ Y+++ E  L +
Sbjct: 165 EDGRTLSDYNIQKESTLHL 183



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 83/160 (51%), Gaps = 8/160 (5%)

Query: 273 IKNNYVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAG 332
           +++N+V    P+       T  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAG
Sbjct: 28  VRDNFVQKSWPTFCTKLSLT--GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAG 85

Query: 333 KRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ 392
           K+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K K Q
Sbjct: 86  KQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQ 145

Query: 393 ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
                    + L+     L+D RTL+DY +     + LV 
Sbjct: 146 DKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 185



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 79/150 (52%), Gaps = 10/150 (6%)

Query: 133 VFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDS 192
            FC K  LS+     TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED 
Sbjct: 39  TFCTK--LSL-----TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 91

Query: 193 KTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLS 249
           +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   + 
Sbjct: 92  RTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 151

Query: 250 LGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
              Q L +AG +LE  +TL+ Y I+    L
Sbjct: 152 PDQQRLIFAGKQLEDGRTLSDYNIQKESTL 181


>gi|339232958|ref|XP_003381596.1| ubiquitin family protein [Trichinella spiralis]
 gi|316979574|gb|EFV62350.1| ubiquitin family protein [Trichinella spiralis]
          Length = 152

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/140 (45%), Positives = 85/140 (60%), Gaps = 3/140 (2%)

Query: 6   SEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKL 64
           S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +    M++
Sbjct: 14  SDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 73

Query: 65  FVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNI 124
           FVK  T +T T+ E  P  TV+N+K  IQ KEGI  DQ  L++ GK L ED+ T++  NI
Sbjct: 74  FVKTLTGKTITL-EVEPSDTVENVKGKIQDKEGIPPDQQRLIFAGKQL-EDSRTLSDYNI 131

Query: 125 KSESIIHLVFCPKEILSIFV 144
           + ES +HLV   +    IFV
Sbjct: 132 QKESTLHLVLRLRGGCGIFV 151



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 51/129 (39%), Positives = 79/129 (61%), Gaps = 1/129 (0%)

Query: 80  MPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEI 139
           +P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV   +  
Sbjct: 12  IPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGG 70

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  + +VK  +    G+      +I+ GK+LEDS+TL+ Y+
Sbjct: 71  MQIFVKTLTGKTITLEVEPSDTVENVKGKIQDKEGIPPDQQRLIFAGKQLEDSRTLSDYN 130

Query: 200 MKDECLLEM 208
           ++ E  L +
Sbjct: 131 IQKESTLHL 139



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 54/126 (42%), Positives = 78/126 (61%), Gaps = 3/126 (2%)

Query: 234 VVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFV 290
            + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFV
Sbjct: 16  TIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 75

Query: 291 KTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHS 350
           KT  GKTITL+V+P +TV++VK K+ DK   P   Q ++FAGK+L ++  L+ YNIQK S
Sbjct: 76  KTLTGKTITLEVEPSDTVENVKGKIQDKEGIPPDQQRLIFAGKQLEDSRTLSDYNIQKES 135

Query: 351 TLHMVL 356
           TLH+VL
Sbjct: 136 TLHLVL 141



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 65/129 (50%), Gaps = 6/129 (4%)

Query: 304 PYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRII 363
           P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     + 
Sbjct: 13  PSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 72

Query: 364 ELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMD 417
                    +I+L +  S+  E  K K Q         + L+     L+D RTL+DY + 
Sbjct: 73  IFVKTLTGKTITLEVEPSDTVENVKGKIQDKEGIPPDQQRLIFAGKQLEDSRTLSDYNIQ 132

Query: 418 LSEKVVLVF 426
               + LV 
Sbjct: 133 KESTLHLVL 141



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 64/124 (51%), Gaps = 3/124 (2%)

Query: 159 SFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQI 215
           S  I +VK  +    G+      +I+ GK+LED +TL+ Y+++ E  L +       +QI
Sbjct: 14  SDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 73

Query: 216 FVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKN 275
           FV+T   + + LEVE    V +VK  + +   +    Q L +AG +LE  +TL+ Y I+ 
Sbjct: 74  FVKTLTGKTITLEVEPSDTVENVKGKIQDKEGIPPDQQRLIFAGKQLEDSRTLSDYNIQK 133

Query: 276 NYVL 279
              L
Sbjct: 134 ESTL 137



 Score = 46.6 bits (109), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 1/67 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ ++N+K  I  KEGI  D   L FAG +LE  R L DY I+  STLH + +  
Sbjct: 85  LEVEPSDTVENVKGKIQDKEGIPPDQQRLIFAGKQLEDSRTLSDYNIQKESTLHLVLRLR 144

Query: 60  SEMKLFV 66
               +FV
Sbjct: 145 GGCGIFV 151


>gi|27734383|gb|AAM51220.1| polyubiquitin [Euglypha rotunda]
 gi|27734385|gb|AAM51221.1| polyubiquitin [Euglypha rotunda]
          Length = 177

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/172 (41%), Positives = 102/172 (59%), Gaps = 9/172 (5%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL--HQ 57
           + V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY +   +TLH +   +
Sbjct: 8   LDVEASDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNVTKEATLHLVLRLR 67

Query: 58  NLSEMKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDT 116
             S M++FVK  T +T T+ VEA    T++N+K  IQ KEGI  DQ  L++ GK L ED 
Sbjct: 68  GGSGMQIFVKTLTGKTITLDVEA--SDTIENVKQKIQDKEGIPPDQQRLIFAGKQL-EDG 124

Query: 117 ATMTSMNIKSESIIHLVFCPK--EILSIFVKAATGEIVNLEVKHSFAIRDVK 166
            T++  N+  E+ +HLV   +    + IFVK  TG+ + L+V+ S  I +VK
Sbjct: 125 RTLSDYNVTKEATLHLVLRLRGGSGMQIFVKTLTGKTITLDVEASDTIENVK 176



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 59/175 (33%), Positives = 97/175 (55%), Gaps = 10/175 (5%)

Query: 148 TGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLE 207
           TG+ + L+V+ S  I +VK  +    G+      +I+ GK+LED +TL+ Y++  E  L 
Sbjct: 2   TGKTITLDVEASDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNVTKEATLH 61

Query: 208 MF-----PSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKL 262
           +       S +QIFV+T   + + L+VE    + +VK+ + +   +    Q L +AG +L
Sbjct: 62  LVLRLRGGSGMQIFVKTLTGKTITLDVEASDTIENVKQKIQDKEGIPPDQQRLIFAGKQL 121

Query: 263 EACKTLASYGIKNNYVLDVL-----PSPFQIFVKTWGGKTITLDVQPYNTVQDVK 312
           E  +TL+ Y +     L ++      S  QIFVKT  GKTITLDV+  +T+++VK
Sbjct: 122 EDGRTLSDYNVTKEATLHLVLRLRGGSGMQIFVKTLTGKTITLDVEASDTIENVK 176



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 64/179 (35%), Positives = 101/179 (56%), Gaps = 11/179 (6%)

Query: 70  TNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSES 128
           T +T T+ VEA    T++N+K  IQ KEGI  DQ  L++ GK L ED  T++  N+  E+
Sbjct: 2   TGKTITLDVEA--SDTIENVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNVTKEA 58

Query: 129 IIHLVFCPK--EILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEG 186
            +HLV   +    + IFVK  TG+ + L+V+ S  I +VK  +    G+      +I+ G
Sbjct: 59  TLHLVLRLRGGSGMQIFVKTLTGKTITLDVEASDTIENVKQKIQDKEGIPPDQQRLIFAG 118

Query: 187 KKLEDSKTLAFYDMKDECLLEMF-----PSSIQIFVRTPIEEIVRLEVEVLIVVRDVKE 240
           K+LED +TL+ Y++  E  L +       S +QIFV+T   + + L+VE    + +VK+
Sbjct: 119 KQLEDGRTLSDYNVTKEATLHLVLRLRGGSGMQIFVKTLTGKTITLDVEASDTIENVKQ 177



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/137 (37%), Positives = 81/137 (59%), Gaps = 5/137 (3%)

Query: 225 VRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVL-- 282
           + L+VE    + +VK+ + +   +    Q L +AG +LE  +TL+ Y +     L ++  
Sbjct: 6   ITLDVEASDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNVTKEATLHLVLR 65

Query: 283 ---PSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENH 339
               S  QIFVKT  GKTITLDV+  +T+++VK K+ DK   P   Q ++FAGK+L +  
Sbjct: 66  LRGGSGMQIFVKTLTGKTITLDVEASDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGR 125

Query: 340 VLARYNIQKHSTLHMVL 356
            L+ YN+ K +TLH+VL
Sbjct: 126 TLSDYNVTKEATLHLVL 142



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 69/128 (53%), Gaps = 8/128 (6%)

Query: 295 GKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHM 354
           GKTITLDV+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN+ K +TLH+
Sbjct: 3   GKTITLDVEASDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNVTKEATLHL 62

Query: 355 V--LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQ 406
           V  L   S +          +I+L +  S+  E  K K Q         + L+     L+
Sbjct: 63  VLRLRGGSGMQIFVKTLTGKTITLDVEASDTIENVKQKIQDKEGIPPDQQRLIFAGKQLE 122

Query: 407 DDRTLADY 414
           D RTL+DY
Sbjct: 123 DGRTLSDY 130


>gi|428164090|gb|EKX33130.1| ubiquitin [Guillardia theta CCMP2712]
          Length = 153

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/147 (42%), Positives = 86/147 (58%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    +  VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+  VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDMVKSKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   LA YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVL 147



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 58/147 (39%), Positives = 86/147 (58%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+  +K+ IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I  VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDMVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHL 145



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 58/135 (42%), Positives = 80/135 (59%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I  +K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+  +K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
              NI+ ES +HLV 
Sbjct: 133 ADYNIQKESTLHLVL 147



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 78/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+  VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  +M K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDMVKSKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTLADY +     + LV 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVL 147


>gi|62079638|gb|AAX61165.1| ubiquitin [Oreochromis mossambicus]
          Length = 160

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/160 (39%), Positives = 93/160 (58%), Gaps = 4/160 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +            
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEAFPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDE--CLLEMFPSSIQIFVRT 219
           +I+ GK+LED +TL+ Y+++      L      +QIFV+T
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKSPPSTLSCVSGGMQIFVKT 158



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 60/148 (40%), Positives = 87/148 (58%), Gaps = 5/148 (3%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEAFPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKH--STLHMV 355
           FAGK+L +   L+ YNIQK   STL  V
Sbjct: 121 FAGKQLEDGRTLSDYNIQKSPPSTLSCV 148



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/149 (41%), Positives = 87/149 (58%), Gaps = 4/149 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KE    DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEAFPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAAT 148
           +  NI+ +S    + C    + IFVK  T
Sbjct: 133 SDYNIQ-KSPPSTLSCVSGGMQIFVKTLT 160



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 79/145 (54%), Gaps = 6/145 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVK------FQAAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K      F    + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEAFPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVL 424
                L+D RTL+DY +  S    L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKSPPSTL 145


>gi|40647160|gb|AAR88386.1| polyubiquitin 1, partial [Plasmodiophora brassicae]
 gi|40647162|gb|AAR88387.1| polyubiquitin 2, partial [Plasmodiophora brassicae]
          Length = 175

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/170 (41%), Positives = 94/170 (55%), Gaps = 5/170 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHF-LHQN 58
           + V   + I+ +KA I  KEGI  D   L FAG +LE GR L DY I+  STLH  L   
Sbjct: 8   LDVDSGDTIETVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 67

Query: 59  LSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
              M++FVK  T +T T ++     T++ +K  IQ KEGI  DQ  L++ GK L ED  T
Sbjct: 68  GGTMQIFVKTLTGKTIT-LDVDSGDTIETVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 125

Query: 119 MTSMNIKSESIIHLVFCPK-EILSIFVKAATGEIVNLEVKHSFAIRDVKA 167
           +   NI+ ES +HLV   +   + IFVK  TG+ + L+V     I  VKA
Sbjct: 126 LADYNIQKESTLHLVLRLRGGTMQIFVKTLTGKTITLDVDSGDTIETVKA 175



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 53/109 (48%), Positives = 68/109 (62%), Gaps = 4/109 (3%)

Query: 252 NQDLFYAGTKLEACKTLASYGIKN----NYVLDVLPSPFQIFVKTWGGKTITLDVQPYNT 307
            Q L +AG +LE  +TLA Y I+     + VL +     QIFVKT  GKTITLDV   +T
Sbjct: 33  QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMQIFVKTLTGKTITLDVDSGDT 92

Query: 308 VQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           ++ VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 93  IETVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 141



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/174 (34%), Positives = 94/174 (54%), Gaps = 8/174 (4%)

Query: 148 TGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDEC--- 204
           TG+ + L+V     I  VKA +    G+      +I+ GK+LED +TLA Y+++ E    
Sbjct: 2   TGKTITLDVDSGDTIETVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 61

Query: 205 -LLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLE 263
            +L +   ++QIFV+T   + + L+V+    +  VK  + +   +    Q L +AG +LE
Sbjct: 62  LVLRLRGGTMQIFVKTLTGKTITLDVDSGDTIETVKAKIQDKEGIPPDQQRLIFAGKQLE 121

Query: 264 ACKTLASYGIKN----NYVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
             +TLA Y I+     + VL +     QIFVKT  GKTITLDV   +T++ VK 
Sbjct: 122 DGRTLADYNIQKESTLHLVLRLRGGTMQIFVKTLTGKTITLDVDSGDTIETVKA 175



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 90/161 (55%), Gaps = 6/161 (3%)

Query: 84  TVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKE-ILSI 142
           T++ +K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +   + I
Sbjct: 15  TIETVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGTMQI 73

Query: 143 FVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKD 202
           FVK  TG+ + L+V     I  VKA +    G+      +I+ GK+LED +TLA Y+++ 
Sbjct: 74  FVKTLTGKTITLDVDSGDTIETVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 133

Query: 203 EC----LLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVK 239
           E     +L +   ++QIFV+T   + + L+V+    +  VK
Sbjct: 134 ESTLHLVLRLRGGTMQIFVKTLTGKTITLDVDSGDTIETVK 174



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/127 (38%), Positives = 69/127 (54%), Gaps = 7/127 (5%)

Query: 295 GKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHM 354
           GKTITLDV   +T++ VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+
Sbjct: 3   GKTITLDVDSGDTIETVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 62

Query: 355 VLAPSSRIIELPL-IFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           VL      +++ +      +I+L +   +  E  K K Q         + L+     L+D
Sbjct: 63  VLRLRGGTMQIFVKTLTGKTITLDVDSGDTIETVKAKIQDKEGIPPDQQRLIFAGKQLED 122

Query: 408 DRTLADY 414
            RTLADY
Sbjct: 123 GRTLADY 129


>gi|358060688|dbj|GAA93627.1| hypothetical protein E5Q_00271 [Mixia osmundae IAM 14324]
          Length = 1022

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/168 (39%), Positives = 97/168 (57%), Gaps = 16/168 (9%)

Query: 200 MKDECLLEMFPSS---IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           +K +  +E +P S   +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 243 VKKQSDIETYPKSDTNMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 302

Query: 257 YAGTKLEACKTLASYGIKNNYVLDVLPSPF--------QIFVKTWGGKTITLDVQPYNTV 308
           +AG +LE  +TL+ Y I+ +     LPS          QIFVKT  GKTITL+V+  +T+
Sbjct: 303 FAGKQLEDGRTLSDYNIRRS-----LPSTLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 357

Query: 309 QDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
            +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 358 DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 405



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/163 (34%), Positives = 91/163 (55%), Gaps = 2/163 (1%)

Query: 46  IRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTL 105
           ++  S +    ++ + M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L
Sbjct: 243 VKKQSDIETYPKSDTNMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRL 301

Query: 106 VYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDV 165
           ++ GK L ED  T++  NI+      LV   +  + IFVK  TG+ + LEV+ S  I +V
Sbjct: 302 IFAGKQL-EDGRTLSDYNIRRSLPSTLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 360

Query: 166 KAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
           KA +    G+      +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 361 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 403



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/134 (43%), Positives = 79/134 (58%), Gaps = 3/134 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY IR +     + +  
Sbjct: 273 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIRRSLPSTLVLRLR 332

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 333 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 390

Query: 120 TSMNIKSESIIHLV 133
           +  NI+ ES +HLV
Sbjct: 391 SDYNIQKESTLHLV 404



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 77/143 (53%), Gaps = 3/143 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 259 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 318

Query: 200 MK---DECLLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++      L+      +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 319 IRRSLPSTLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 378

Query: 257 YAGTKLEACKTLASYGIKNNYVL 279
           +AG +LE  +TL+ Y I+    L
Sbjct: 379 FAGKQLEDGRTLSDYNIQKESTL 401



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 78/147 (53%), Gaps = 10/147 (6%)

Query: 287 QIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNI 346
           QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNI
Sbjct: 260 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 319

Query: 347 QKH--STLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKEL 398
           ++   STL + L    +I    L     +I+L +  S+  +  K K Q         + L
Sbjct: 320 RRSLPSTLVLRLRGGMQIFVKTLT--GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 377

Query: 399 LVDQVALQDDRTLADYGMDLSEKVVLV 425
           +     L+D RTL+DY +     + LV
Sbjct: 378 IFAGKQLEDGRTLSDYNIQKESTLHLV 404


>gi|123390682|ref|XP_001299927.1| polyubiquitin [Trichomonas vaginalis G3]
 gi|121880876|gb|EAX86997.1| polyubiquitin [Trichomonas vaginalis G3]
          Length = 153

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 87/147 (59%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + DVK  + +   +    Q L +AG +LE   TL  Y 
Sbjct: 1   MQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYS 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+ +  L +   L    QIFVKT  GK ITL+V+P + ++DVK K+ DK   P   Q ++
Sbjct: 61  IQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L + + L  Y+IQK STLH+VL
Sbjct: 121 FAGKQLEDGNTLQDYSIQKDSTLHLVL 147



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 84/147 (57%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +  T+ E  P   ++++K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKHITL-EVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQL-EDGNTLQD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            +I+ +S +HLV   +  + IFVK  TG+ + LEV+ +  I DVKA +    G+      
Sbjct: 59  YSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED  TL  Y ++ +  L +
Sbjct: 119 LIFAGKQLEDGNTLQDYSIQKDSTLHL 145



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/135 (40%), Positives = 82/135 (60%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ ++ I+++KA I  KEGI  D   L FAG +LE G  L DY I+ +STLH + +  
Sbjct: 15  LEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +  T +E  P   ++++K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKHIT-LEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQL-EDGNTL 132

Query: 120 TSMNIKSESIIHLVF 134
              +I+ +S +HLV 
Sbjct: 133 QDYSIQKDSTLHLVL 147



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 75/147 (51%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GK ITL+V+P + ++DVK K+ DK   P   Q ++FAGK+L + + L  Y+
Sbjct: 1   MQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYS 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +           I+L +  ++  E  K K Q         + L+
Sbjct: 61  IQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D  TL DY +     + LV 
Sbjct: 121 FAGKQLEDGNTLQDYSIQKDSTLHLVL 147


>gi|1321735|emb|CAA64326.1| ubiquitin [Carabus alpestris]
          Length = 139

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 58/140 (41%), Positives = 87/140 (62%), Gaps = 2/140 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMK 201
           +I+ GK+LED +TL+ Y+++
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQ 138



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 56/139 (40%), Positives = 83/139 (59%), Gaps = 3/139 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQK 348
           FAGK+L +   L+ YNIQK
Sbjct: 121 FAGKQLEDGRTLSDYNIQK 139



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 57/126 (45%), Positives = 79/126 (62%), Gaps = 3/126 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIK 125
           +  NI+
Sbjct: 133 SDYNIQ 138



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 54/137 (39%), Positives = 77/137 (56%), Gaps = 6/137 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGM 416
                L+D RTL+DY +
Sbjct: 121 FAGKQLEDGRTLSDYNI 137



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 77/138 (55%), Gaps = 3/138 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIK 274
           +AG +LE  +TL+ Y I+
Sbjct: 121 FAGKQLEDGRTLSDYNIQ 138


>gi|27734306|gb|AAM50044.1| polyubiquitin 7 [Cercomonas sp. ATCC 50316]
          Length = 177

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/171 (40%), Positives = 98/171 (57%), Gaps = 7/171 (4%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL--HQ 57
           + V+ S+ I+ +K  I  KEGI  D   L FAG +LE GR L DY I+  STLH +   +
Sbjct: 8   LDVESSDTIETVKQKIRDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 67

Query: 58  NLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTA 117
             S M++FVK  T +T T ++     T++ +K  IQ KEGI  DQ  L++ GK L ED  
Sbjct: 68  GGSAMQIFVKTLTGKTIT-LDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQL-EDGR 125

Query: 118 TMTSMNIKSESIIHLVFCPK--EILSIFVKAATGEIVNLEVKHSFAIRDVK 166
           T+   NI+ ES +HLV   +    + IFVK  TG+ + L+V+ S  I  VK
Sbjct: 126 TLADYNIQKESTLHLVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVK 176



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 58/137 (42%), Positives = 81/137 (59%), Gaps = 5/137 (3%)

Query: 225 VRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVL-- 282
           + L+VE    +  VK+ + +   +    Q L +AG +LE  +TLA Y I+    L ++  
Sbjct: 6   ITLDVESSDTIETVKQKIRDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 65

Query: 283 ---PSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENH 339
               S  QIFVKT  GKTITLDV+  +T++ VK K+ DK   P   Q ++FAGK+L +  
Sbjct: 66  LRGGSAMQIFVKTLTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGR 125

Query: 340 VLARYNIQKHSTLHMVL 356
            LA YNIQK STLH+VL
Sbjct: 126 TLADYNIQKESTLHLVL 142



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 62/175 (35%), Positives = 97/175 (55%), Gaps = 10/175 (5%)

Query: 148 TGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLE 207
           TG+ + L+V+ S  I  VK  +    G+      +I+ GK+LED +TLA Y+++ E  L 
Sbjct: 2   TGKTITLDVESSDTIETVKQKIRDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 61

Query: 208 MF-----PSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKL 262
           +       S++QIFV+T   + + L+VE    +  VK+ + +   +    Q L +AG +L
Sbjct: 62  LVLRLRGGSAMQIFVKTLTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQL 121

Query: 263 EACKTLASYGIKNNYVLDVL-----PSPFQIFVKTWGGKTITLDVQPYNTVQDVK 312
           E  +TLA Y I+    L ++      S  QIFVKT  GKTITLDV+  +T++ VK
Sbjct: 122 EDGRTLADYNIQKESTLHLVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVK 176



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/164 (35%), Positives = 91/164 (55%), Gaps = 8/164 (4%)

Query: 84  TVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPK--EILS 141
           T++ +K  I+ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +    + 
Sbjct: 15  TIETVKQKIRDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGSAMQ 73

Query: 142 IFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMK 201
           IFVK  TG+ + L+V+ S  I  VK  +    G+      +I+ GK+LED +TLA Y+++
Sbjct: 74  IFVKTLTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 133

Query: 202 DECLLEMF-----PSSIQIFVRTPIEEIVRLEVEVLIVVRDVKE 240
            E  L +       S +QIFV+T   + + L+VE    +  VK+
Sbjct: 134 KESTLHLVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVKQ 177



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 51/128 (39%), Positives = 69/128 (53%), Gaps = 8/128 (6%)

Query: 295 GKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHM 354
           GKTITLDV+  +T++ VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+
Sbjct: 3   GKTITLDVESSDTIETVKQKIRDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 62

Query: 355 V--LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQ 406
           V  L   S +          +I+L +  S+  E  K K Q         + L+     L+
Sbjct: 63  VLRLRGGSAMQIFVKTLTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLE 122

Query: 407 DDRTLADY 414
           D RTLADY
Sbjct: 123 DGRTLADY 130


>gi|123471218|ref|XP_001318810.1| polyubiquitin [Trichomonas vaginalis G3]
 gi|123479158|ref|XP_001322738.1| polyubiquitin [Trichomonas vaginalis G3]
 gi|123501326|ref|XP_001328048.1| polyubiquitin [Trichomonas vaginalis G3]
 gi|121901578|gb|EAY06587.1| polyubiquitin, putative [Trichomonas vaginalis G3]
 gi|121905590|gb|EAY10515.1| polyubiquitin, putative [Trichomonas vaginalis G3]
 gi|121910986|gb|EAY15825.1| polyubiquitin, putative [Trichomonas vaginalis G3]
          Length = 153

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 87/147 (59%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + DVK  + +   +    Q L +AG +LE   TL  Y 
Sbjct: 1   MQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYS 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+ +  L +   L    QIFVKT  GK ITL+V+P + ++DVK K+ DK   P   Q ++
Sbjct: 61  IQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L + + L  Y+IQK STLH+VL
Sbjct: 121 FAGKQLEDGNTLQDYSIQKDSTLHLVL 147



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 84/147 (57%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +  T+ E  P   ++++K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKHITL-EVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQL-EDGNTLQD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            +I+ +S +HLV   +  + IFVK  TG+ + LEV+ +  I DVKA +    G+      
Sbjct: 59  YSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED  TL  Y ++ +  L +
Sbjct: 119 LIFAGKQLEDGNTLQDYSIQKDSTLHL 145



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/135 (40%), Positives = 82/135 (60%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ ++ I+++KA I  KEGI  D   L FAG +LE G  L DY I+ +STLH + +  
Sbjct: 15  LEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +  T +E  P   ++++K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKHIT-LEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQL-EDGNTL 132

Query: 120 TSMNIKSESIIHLVF 134
              +I+ +S +HLV 
Sbjct: 133 QDYSIQKDSTLHLVL 147



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 75/147 (51%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GK ITL+V+P + ++DVK K+ DK   P   Q ++FAGK+L + + L  Y+
Sbjct: 1   MQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYS 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +           I+L +  ++  E  K K Q         + L+
Sbjct: 61  IQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D  TL DY +     + LV 
Sbjct: 121 FAGKQLEDGNTLQDYSIQKDSTLHLVL 147


>gi|27734371|gb|AAM51214.1| polyubiquitin [Cercomonas sp. ATCC 50316]
 gi|27734373|gb|AAM51215.1| polyubiquitin [Cercomonas sp. ATCC 50316]
          Length = 177

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/171 (40%), Positives = 98/171 (57%), Gaps = 7/171 (4%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL--HQ 57
           + V+ S+ I+ +K  I  KEGI  D   L FAG +LE GR L DY I+  STLH +   +
Sbjct: 8   LDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 67

Query: 58  NLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTA 117
             S M++FVK  T +T T ++     T++ +K  IQ KEGI  DQ  L++ GK L ED  
Sbjct: 68  GGSGMQIFVKTLTGKTIT-LDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQL-EDGR 125

Query: 118 TMTSMNIKSESIIHLVFCPK--EILSIFVKAATGEIVNLEVKHSFAIRDVK 166
           T+   NI+ ES +HLV   +    + IFVK  TG+ + L+V+ S  I  VK
Sbjct: 126 TLADYNIQKESTLHLVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVK 176



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 58/137 (42%), Positives = 81/137 (59%), Gaps = 5/137 (3%)

Query: 225 VRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVL-- 282
           + L+VE    +  VK+ + +   +    Q L +AG +LE  +TLA Y I+    L ++  
Sbjct: 6   ITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 65

Query: 283 ---PSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENH 339
               S  QIFVKT  GKTITLDV+  +T++ VK K+ DK   P   Q ++FAGK+L +  
Sbjct: 66  LRGGSGMQIFVKTLTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGR 125

Query: 340 VLARYNIQKHSTLHMVL 356
            LA YNIQK STLH+VL
Sbjct: 126 TLADYNIQKESTLHLVL 142



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 62/175 (35%), Positives = 96/175 (54%), Gaps = 10/175 (5%)

Query: 148 TGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLE 207
           TG+ + L+V+ S  I  VK  +    G+      +I+ GK+LED +TLA Y+++ E  L 
Sbjct: 2   TGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 61

Query: 208 MF-----PSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKL 262
           +       S +QIFV+T   + + L+VE    +  VK+ + +   +    Q L +AG +L
Sbjct: 62  LVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQL 121

Query: 263 EACKTLASYGIKNNYVLDVL-----PSPFQIFVKTWGGKTITLDVQPYNTVQDVK 312
           E  +TLA Y I+    L ++      S  QIFVKT  GKTITLDV+  +T++ VK
Sbjct: 122 EDGRTLADYNIQKESTLHLVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVK 176



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/164 (36%), Positives = 91/164 (55%), Gaps = 8/164 (4%)

Query: 84  TVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPK--EILS 141
           T++ +K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +    + 
Sbjct: 15  TIETVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGSGMQ 73

Query: 142 IFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMK 201
           IFVK  TG+ + L+V+ S  I  VK  +    G+      +I+ GK+LED +TLA Y+++
Sbjct: 74  IFVKTLTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 133

Query: 202 DECLLEMF-----PSSIQIFVRTPIEEIVRLEVEVLIVVRDVKE 240
            E  L +       S +QIFV+T   + + L+VE    +  VK+
Sbjct: 134 KESTLHLVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVKQ 177



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 51/128 (39%), Positives = 69/128 (53%), Gaps = 8/128 (6%)

Query: 295 GKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHM 354
           GKTITLDV+  +T++ VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+
Sbjct: 3   GKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 62

Query: 355 V--LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQ 406
           V  L   S +          +I+L +  S+  E  K K Q         + L+     L+
Sbjct: 63  VLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLE 122

Query: 407 DDRTLADY 414
           D RTLADY
Sbjct: 123 DGRTLADY 130


>gi|339233028|ref|XP_003381631.1| ubiquitin family protein [Trichinella spiralis]
 gi|316979531|gb|EFV62315.1| ubiquitin family protein [Trichinella spiralis]
          Length = 203

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/258 (31%), Positives = 115/258 (44%), Gaps = 70/258 (27%)

Query: 102 QFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFA 161
           Q TLVY    +K D  T            H ++ P     IFVK  TG+ + LEV+ S  
Sbjct: 3   QTTLVY---FIKNDVNTT-----------HPIYTPA---LIFVKTLTGKTITLEVEPSDT 45

Query: 162 IRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEMFPSSIQIFVRTPI 221
           I +VK+ +    G+      +I+ G K                                 
Sbjct: 46  IENVKSKIQDKEGIPPDQQRLIFAGNK--------------------------------- 72

Query: 222 EEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV 281
            EI  L+ E                 +    Q L +AG +LE  +TL+ Y I+    L +
Sbjct: 73  -EITILDKE----------------GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 115

Query: 282 ---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFEN 338
              L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L + 
Sbjct: 116 VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDG 175

Query: 339 HVLARYNIQKHSTLHMVL 356
             L+ YNIQK STLH+VL
Sbjct: 176 RTLSDYNIQKESTLHLVL 193



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 63/158 (39%), Positives = 88/158 (55%), Gaps = 26/158 (16%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISED-------------ICD----------LFFAGDRLE 37
           ++V+ S+ I+N+K+ I  KEGI  D             I D          L FAG +LE
Sbjct: 38  LEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGNKEITILDKEGIPPDQQRLIFAGKQLE 97

Query: 38  AGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKE 96
            GR L DY I+  STLH + +    M++FVK  T +T T +E  P  T++N+K+ IQ KE
Sbjct: 98  DGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT-LEVEPSDTIENVKSKIQDKE 156

Query: 97  GIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVF 134
           GI  DQ  L++ GK L ED  T++  NI+ ES +HLV 
Sbjct: 157 GIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVL 193



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/189 (33%), Positives = 100/189 (52%), Gaps = 29/189 (15%)

Query: 44  YGIRNN-STLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQ 102
           Y I+N+ +T H ++   +   +FVK  T +T T+ E  P  T++N+K+ IQ KEGI  DQ
Sbjct: 8   YFIKNDVNTTHPIY---TPALIFVKTLTGKTITL-EVEPSDTIENVKSKIQDKEGIPPDQ 63

Query: 103 FTLVYDG-----------------------KLLKEDTATMTSMNIKSESIIHLVFCPKEI 139
             L++ G                       K L ED  T++  NI+ ES +HLV   +  
Sbjct: 64  QRLIFAGNKEITILDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGG 122

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK+ +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 123 MQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 182

Query: 200 MKDECLLEM 208
           ++ E  L +
Sbjct: 183 IQKESTLHL 191



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 81/172 (47%), Gaps = 29/172 (16%)

Query: 284 SPFQIFVKTWGGKTITLDVQPYNTVQDVKVKL-----------------------FDKLQ 320
           +P  IFVKT  GKTITL+V+P +T+++VK K+                        DK  
Sbjct: 22  TPALIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGNKEITILDKEG 81

Query: 321 TPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISI 380
            P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  
Sbjct: 82  IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEP 141

Query: 381 SEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 142 SDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 193


>gi|578550|emb|CAA80336.1| ubiquitin [Tetrahymena pyriformis]
          Length = 225

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/220 (30%), Positives = 120/220 (54%), Gaps = 6/220 (2%)

Query: 142 IFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMK 201
           IF K   G+ + LEV HS  I  VK+++ +  G+      +++ GK LE+ +TL++Y ++
Sbjct: 3   IFAKILNGKTMTLEVTHSDTIEKVKSLIQNKEGILIEQQRLLHTGKNLENQRTLSYYSIQ 62

Query: 202 DECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYA 258
            +  L++       +QIFV+T   + + L+V     + D+K ++++   +        +A
Sbjct: 63  IQSTLQLEIRQSGVMQIFVQTLAGKTITLDVTSSNTINDIKSMISDKESIPPDELRFIFA 122

Query: 259 GTKLEACKTLASYGIK--NNYVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLF 316
           G  LE  +TL+   I+  N   L ++    +IFV+T   K  TL+V P + ++ VK K+ 
Sbjct: 123 GKFLEEERTLSDLNIQKENTLHLVLIRVSMKIFVRTLC-KIFTLEVDPSDNIKTVKTKIQ 181

Query: 317 DKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           DK   P     ++F+G +L +   L+ YNIQK STL++V+
Sbjct: 182 DKEGIPSDQLKLIFSGTKLEDEKTLSSYNIQKDSTLNLVI 221



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 125/223 (56%), Gaps = 5/223 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M +F KI   +T T+ E     T++ +K++IQ KEGI  +Q  L++ GK L E+  T++ 
Sbjct: 1   MYIFAKILNGKTMTL-EVTHSDTIEKVKSLIQNKEGILIEQQRLLHTGKNL-ENQRTLSY 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            +I+ +S + L      ++ IFV+   G+ + L+V  S  I D+K+++     +   +  
Sbjct: 59  YSIQIQSTLQLEIRQSGVMQIFVQTLAGKTITLDVTSSNTINDIKSMISDKESIPPDELR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLE--MFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVK 239
            I+ GK LE+ +TL+  +++ E  L   +   S++IFVRT + +I  LEV+    ++ VK
Sbjct: 119 FIFAGKFLEEERTLSDLNIQKENTLHLVLIRVSMKIFVRT-LCKIFTLEVDPSDNIKTVK 177

Query: 240 EIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVL 282
             + +   +      L ++GTKLE  KTL+SY I+ +  L+++
Sbjct: 178 TKIQDKEGIPSDQLKLIFSGTKLEDEKTLSSYNIQKDSTLNLV 220



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/211 (33%), Positives = 109/211 (51%), Gaps = 11/211 (5%)

Query: 215 IFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIK 274
           IF +    + + LEV     +  VK ++ N   + +  Q L + G  LE  +TL+ Y I+
Sbjct: 3   IFAKILNGKTMTLEVTHSDTIEKVKSLIQNKEGILIEQQRLLHTGKNLENQRTLSYYSIQ 62

Query: 275 --NNYVLDVLPSP-FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFA 331
             +   L++  S   QIFV+T  GKTITLDV   NT+ D+K  + DK   P      +FA
Sbjct: 63  IQSTLQLEIRQSGVMQIFVQTLAGKTITLDVTSSNTINDIKSMISDKESIPPDELRFIFA 122

Query: 332 GKRLFENHVLARYNIQKHSTLHMVLAPSSRII---ELPLIF---IDPSISLSISISEVKE 385
           GK L E   L+  NIQK +TLH+VL   S  I    L  IF   +DPS ++    +++++
Sbjct: 123 GKFLEEERTLSDLNIQKENTLHLVLIRVSMKIFVRTLCKIFTLEVDPSDNIKTVKTKIQD 182

Query: 386 MAKVKFQAAVKELLVDQVALQDDRTLADYGM 416
             K    +   +L+     L+D++TL+ Y +
Sbjct: 183 --KEGIPSDQLKLIFSGTKLEDEKTLSSYNI 211



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/134 (39%), Positives = 75/134 (55%), Gaps = 5/134 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V  S  I ++K+MI  KE I  D     FAG  LE  R L D  I+  +TLH +   +
Sbjct: 91  LDVTSSNTINDIKSMISDKESIPPDELRFIFAGKFLEEERTLSDLNIQKENTLHLVLIRV 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
           S MK+FV+  T      +E  P   ++ +KT IQ KEGI SDQ  L++ G  L ED  T+
Sbjct: 151 S-MKIFVR--TLCKIFTLEVDPSDNIKTVKTKIQDKEGIPSDQLKLIFSGTKL-EDEKTL 206

Query: 120 TSMNIKSESIIHLV 133
           +S NI+ +S ++LV
Sbjct: 207 SSYNIQKDSTLNLV 220


>gi|17016983|gb|AAL33551.1|AF436850_1 polyubiquitin [Cucumis melo]
          Length = 143

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 63/140 (45%), Positives = 84/140 (60%), Gaps = 3/140 (2%)

Query: 29  LFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQN 87
           L FAG +LE GR L DY I+  STLH + +    M++FVK  T +T T+ E     T+ N
Sbjct: 6   LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDN 64

Query: 88  IKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAA 147
           +K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +  + IFVK  
Sbjct: 65  VKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 123

Query: 148 TGEIVNLEVKHSFAIRDVKA 167
           TG+ + LEV+ S  I +VKA
Sbjct: 124 TGKTITLEVESSDTIDNVKA 143



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/108 (48%), Positives = 68/108 (62%), Gaps = 3/108 (2%)

Query: 252 NQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTV 308
            Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+
Sbjct: 3   QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 62

Query: 309 QDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
            +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 63  DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 110



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 54/142 (38%), Positives = 81/142 (57%), Gaps = 4/142 (2%)

Query: 101 DQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSF 160
           DQ  L++ GK L ED  T+   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S 
Sbjct: 2   DQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD 60

Query: 161 AIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFV 217
            I +VKA +    G+      +I+ GK+LED +TLA Y+++ E  L +       +QIFV
Sbjct: 61  TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFV 120

Query: 218 RTPIEEIVRLEVEVLIVVRDVK 239
           +T   + + LEVE    + +VK
Sbjct: 121 KTLTGKTITLEVESSDTIDNVK 142



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/138 (37%), Positives = 79/138 (57%), Gaps = 6/138 (4%)

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 6   LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 65

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 66  KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 125

Query: 296 KTITLDVQPYNTVQDVKV 313
           KTITL+V+  +T+ +VK 
Sbjct: 126 KTITLEVESSDTIDNVKA 143



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/90 (43%), Positives = 54/90 (60%), Gaps = 2/90 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 54  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 113

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIK 89
             M++FVK  T +T T +E     T+ N+K
Sbjct: 114 GGMQIFVKTLTGKTIT-LEVESSDTIDNVK 142



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 6/107 (5%)

Query: 326 QSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKE 385
           Q ++FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +
Sbjct: 4   QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 63

Query: 386 MAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
             K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 64  NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 110


>gi|323457057|gb|EGB12923.1| ubiquitin [Aureococcus anophagefferens]
          Length = 250

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 119/238 (50%), Gaps = 21/238 (8%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IF+K  TG+I+ L+V     I +VK  +    G+      +I+ G++LED  TL  Y+
Sbjct: 1   MQIFIKTLTGKIITLDVDPPDTIANVKQKIEDKEGIPPDRQRLIFCGRQLEDGPTLIDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ +  L +        QIFV+T   + + L+VE    + +VK+ + +   +    Q L 
Sbjct: 61  IQKQSTLHLVLRLGGPPQIFVKTLTGKTITLDVEPSDTIGNVKQKIQDKEGIPSDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKN----NYVLDVLPSPF--------------QIFVKTWGGKTI 298
           + G + E  +TL+   I N    + VL +L  P               QI VKT  GKTI
Sbjct: 121 FKGKQFEDGRTLSDCSILNYSTLHLVLRLLKEPEREPESEPEPESELEQIVVKTLTGKTI 180

Query: 299 TLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           TL V+P +T+ +VK K+ DK   P   Q ++F GK+  +   L+  NI   ST H+VL
Sbjct: 181 TLVVEPSDTIGNVKQKIQDKEGIPPDQQRLIFKGKQFEDGLTLSDCNIPNKSTFHLVL 238



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 108/212 (50%), Gaps = 18/212 (8%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAG-RLVDYGIRNNSTLHFLHQNL 59
           + V   + I N+K  I  KEGI  D   L F G +LE G  L+DY I+  STLH + +  
Sbjct: 15  LDVDPPDTIANVKQKIEDKEGIPPDRQRLIFCGRQLEDGPTLIDYNIQKQSTLHLVLRLG 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
              ++FVK  T +T T+ +  P  T+ N+K  IQ KEGI SDQ  L++ GK   ED  T+
Sbjct: 75  GPPQIFVKTLTGKTITL-DVEPSDTIGNVKQKIQDKEGIPSDQQRLIFKGKQF-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF---------------CPKEILSIFVKAATGEIVNLEVKHSFAIRD 164
           +  +I + S +HLV                   E+  I VK  TG+ + L V+ S  I +
Sbjct: 133 SDCSILNYSTLHLVLRLLKEPEREPESEPEPESELEQIVVKTLTGKTITLVVEPSDTIGN 192

Query: 165 VKAIVGSVVGVSAADHIMIYEGKKLEDSKTLA 196
           VK  +    G+      +I++GK+ ED  TL+
Sbjct: 193 VKQKIQDKEGIPPDQQRLIFKGKQFEDGLTLS 224



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 52/138 (37%), Positives = 74/138 (53%), Gaps = 14/138 (10%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIF+KT  GK ITLDV P +T+ +VK K+ DK   P   Q ++F G++L +   L  YN
Sbjct: 1   MQIFIKTLTGKIITLDVDPPDTIANVKQKIEDKEGIPPDRQRLIFCGRQLEDGPTLIDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFI----DPSISLSISISEVKEMAKVKFQ------AAV 395
           IQK STLH+VL    R+   P IF+      +I+L +  S+     K K Q      +  
Sbjct: 61  IQKQSTLHLVL----RLGGPPQIFVKTLTGKTITLDVEPSDTIGNVKQKIQDKEGIPSDQ 116

Query: 396 KELLVDQVALQDDRTLAD 413
           + L+      +D RTL+D
Sbjct: 117 QRLIFKGKQFEDGRTLSD 134


>gi|27734369|gb|AAM51213.1| polyubiquitin [Cercomonas sp. ATCC 50316]
          Length = 177

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 69/171 (40%), Positives = 98/171 (57%), Gaps = 7/171 (4%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL--HQ 57
           + V+ S+ I+ +K  I  KEGI  D   L FAG +LE GR L DY I+  STLH +   +
Sbjct: 8   LDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 67

Query: 58  NLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTA 117
             S M++FVK  T +T T ++     T++ +K  IQ KEGI  DQ  L++ G+ L ED  
Sbjct: 68  GGSGMQIFVKTLTGKTIT-LDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGRQL-EDGR 125

Query: 118 TMTSMNIKSESIIHLVFCPK--EILSIFVKAATGEIVNLEVKHSFAIRDVK 166
           T+   NI+ ES +HLV   +    + IFVK  TG+ + L+V+ S  I  VK
Sbjct: 126 TLADYNIQKESTLHLVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVK 176



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/137 (41%), Positives = 81/137 (59%), Gaps = 5/137 (3%)

Query: 225 VRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVL-- 282
           + L+VE    +  VK+ + +   +    Q L +AG +LE  +TLA Y I+    L ++  
Sbjct: 6   ITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 65

Query: 283 ---PSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENH 339
               S  QIFVKT  GKTITLDV+  +T++ VK K+ DK   P   Q ++FAG++L +  
Sbjct: 66  LRGGSGMQIFVKTLTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGRQLEDGR 125

Query: 340 VLARYNIQKHSTLHMVL 356
            LA YNIQK STLH+VL
Sbjct: 126 TLADYNIQKESTLHLVL 142



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 62/175 (35%), Positives = 96/175 (54%), Gaps = 10/175 (5%)

Query: 148 TGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLE 207
           TG+ + L+V+ S  I  VK  +    G+      +I+ GK+LED +TLA Y+++ E  L 
Sbjct: 2   TGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 61

Query: 208 MF-----PSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKL 262
           +       S +QIFV+T   + + L+VE    +  VK+ + +   +    Q L +AG +L
Sbjct: 62  LVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGRQL 121

Query: 263 EACKTLASYGIKNNYVLDVL-----PSPFQIFVKTWGGKTITLDVQPYNTVQDVK 312
           E  +TLA Y I+    L ++      S  QIFVKT  GKTITLDV+  +T++ VK
Sbjct: 122 EDGRTLADYNIQKESTLHLVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVK 176



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/164 (35%), Positives = 91/164 (55%), Gaps = 8/164 (4%)

Query: 84  TVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPK--EILS 141
           T++ +K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +    + 
Sbjct: 15  TIETVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGSGMQ 73

Query: 142 IFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMK 201
           IFVK  TG+ + L+V+ S  I  VK  +    G+      +I+ G++LED +TLA Y+++
Sbjct: 74  IFVKTLTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGRQLEDGRTLADYNIQ 133

Query: 202 DECLLEMF-----PSSIQIFVRTPIEEIVRLEVEVLIVVRDVKE 240
            E  L +       S +QIFV+T   + + L+VE    +  VK+
Sbjct: 134 KESTLHLVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVKQ 177



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 51/128 (39%), Positives = 69/128 (53%), Gaps = 8/128 (6%)

Query: 295 GKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHM 354
           GKTITLDV+  +T++ VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+
Sbjct: 3   GKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 62

Query: 355 V--LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQ 406
           V  L   S +          +I+L +  S+  E  K K Q         + L+     L+
Sbjct: 63  VLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGRQLE 122

Query: 407 DDRTLADY 414
           D RTLADY
Sbjct: 123 DGRTLADY 130


>gi|27734377|gb|AAM51217.1| polyubiquitin [Cercomonas sp. ATCC 50316]
          Length = 177

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 70/171 (40%), Positives = 98/171 (57%), Gaps = 7/171 (4%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL--HQ 57
           + V+ S+ I+ +K  I  KEGI  D   L FAG +LE GR L DY I+  STLH +   +
Sbjct: 8   LDVESSDMIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 67

Query: 58  NLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTA 117
             S M++FVK  T +T T ++     T++ +K  IQ KEGI  DQ  L++ GK L ED  
Sbjct: 68  GGSGMQIFVKTLTGKTIT-LDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQL-EDGR 125

Query: 118 TMTSMNIKSESIIHLVFCPK--EILSIFVKAATGEIVNLEVKHSFAIRDVK 166
           T+   NI+ ES +HLV   +    + IFVK  TG+ + L+V+ S  I  VK
Sbjct: 126 TLADYNIQKESTLHLVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVK 176



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 58/137 (42%), Positives = 82/137 (59%), Gaps = 5/137 (3%)

Query: 225 VRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVL-- 282
           + L+VE   ++  VK+ + +   +    Q L +AG +LE  +TLA Y I+    L ++  
Sbjct: 6   ITLDVESSDMIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 65

Query: 283 ---PSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENH 339
               S  QIFVKT  GKTITLDV+  +T++ VK K+ DK   P   Q ++FAGK+L +  
Sbjct: 66  LRGGSGMQIFVKTLTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGR 125

Query: 340 VLARYNIQKHSTLHMVL 356
            LA YNIQK STLH+VL
Sbjct: 126 TLADYNIQKESTLHLVL 142



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/175 (35%), Positives = 96/175 (54%), Gaps = 10/175 (5%)

Query: 148 TGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLE 207
           TG+ + L+V+ S  I  VK  +    G+      +I+ GK+LED +TLA Y+++ E  L 
Sbjct: 2   TGKTITLDVESSDMIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 61

Query: 208 MF-----PSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKL 262
           +       S +QIFV+T   + + L+VE    +  VK+ + +   +    Q L +AG +L
Sbjct: 62  LVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQL 121

Query: 263 EACKTLASYGIKNNYVLDVL-----PSPFQIFVKTWGGKTITLDVQPYNTVQDVK 312
           E  +TLA Y I+    L ++      S  QIFVKT  GKTITLDV+  +T++ VK
Sbjct: 122 EDGRTLADYNIQKESTLHLVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVK 176



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 59/163 (36%), Positives = 90/163 (55%), Gaps = 8/163 (4%)

Query: 85  VQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPK--EILSI 142
           ++ +K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +    + I
Sbjct: 16  IETVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGSGMQI 74

Query: 143 FVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKD 202
           FVK  TG+ + L+V+ S  I  VK  +    G+      +I+ GK+LED +TLA Y+++ 
Sbjct: 75  FVKTLTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 134

Query: 203 ECLLEMF-----PSSIQIFVRTPIEEIVRLEVEVLIVVRDVKE 240
           E  L +       S +QIFV+T   + + L+VE    +  VK+
Sbjct: 135 ESTLHLVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVKQ 177



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 50/128 (39%), Positives = 68/128 (53%), Gaps = 8/128 (6%)

Query: 295 GKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHM 354
           GKTITLDV+  + ++ VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+
Sbjct: 3   GKTITLDVESSDMIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 62

Query: 355 V--LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQ 406
           V  L   S +          +I+L +  S+  E  K K Q         + L+     L+
Sbjct: 63  VLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLE 122

Query: 407 DDRTLADY 414
           D RTLADY
Sbjct: 123 DGRTLADY 130


>gi|323716602|gb|ADY05179.1| ubiquitin [Acipenser persicus]
          Length = 132

 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 61/133 (45%), Positives = 84/133 (63%), Gaps = 3/133 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 2   LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 61

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 62  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 119

Query: 120 TSMNIKSESIIHL 132
           +  NI+ ES +HL
Sbjct: 120 SDYNIQKESTMHL 132



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 54/131 (41%), Positives = 79/131 (60%), Gaps = 3/131 (2%)

Query: 227 LEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LP 283
           LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L 
Sbjct: 2   LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 61

Query: 284 SPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLAR 343
              QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ 
Sbjct: 62  GGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 121

Query: 344 YNIQKHSTLHM 354
           YNIQK ST+H+
Sbjct: 122 YNIQKESTMHL 132



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 52/133 (39%), Positives = 80/133 (60%), Gaps = 1/133 (0%)

Query: 76  VVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFC 135
            +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV  
Sbjct: 1   TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLR 59

Query: 136 PKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTL 195
            +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL
Sbjct: 60  LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 119

Query: 196 AFYDMKDECLLEM 208
           + Y+++ E  + +
Sbjct: 120 SDYNIQKESTMHL 132



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 67/124 (54%), Gaps = 6/124 (4%)

Query: 299 TLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAP 358
           TL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL  
Sbjct: 1   TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 60

Query: 359 SSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLA 412
              +          +I+L +  S+  E  K K Q         + L+     L+D RTL+
Sbjct: 61  RGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 120

Query: 413 DYGM 416
           DY +
Sbjct: 121 DYNI 124



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 69/129 (53%), Gaps = 3/129 (2%)

Query: 154 LEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FP 210
           LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+++ E  L +     
Sbjct: 2   LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 61

Query: 211 SSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLAS 270
             +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ 
Sbjct: 62  GGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 121

Query: 271 YGIKNNYVL 279
           Y I+    +
Sbjct: 122 YNIQKESTM 130


>gi|218198733|gb|EEC81160.1| hypothetical protein OsI_24083 [Oryza sativa Indica Group]
 gi|222636075|gb|EEE66207.1| hypothetical protein OsJ_22339 [Oryza sativa Japonica Group]
          Length = 240

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 62/148 (41%), Positives = 86/148 (58%), Gaps = 3/148 (2%)

Query: 212 SIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASY 271
           S+QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y
Sbjct: 53  SMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 112

Query: 272 GIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSI 328
            I+    L +   L    QIFVKT  GKTITL V+  + + +VK K+ DK   P   Q +
Sbjct: 113 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLAVESSDKIDNVKAKIQDKEGIPPDQQRL 172

Query: 329 VFAGKRLFENHVLARYNIQKHSTLHMVL 356
           +FA K+L +   LA YNIQK STLH+VL
Sbjct: 173 IFADKQLEDGRTLADYNIQKESTLHLVL 200



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 58/147 (39%), Positives = 85/147 (57%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 54  MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 111

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + L V+ S  I +VKA +    G+      
Sbjct: 112 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLAVESSDKIDNVKAKIQDKEGIPPDQQR 171

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+  K+LED +TLA Y+++ E  L +
Sbjct: 172 LIFADKQLEDGRTLADYNIQKESTLHL 198



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 60/136 (44%), Positives = 81/136 (59%), Gaps = 5/136 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 68  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 127

Query: 60  SEMKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
             M++FVK  T +T T+ VE+     + N+K  IQ KEGI  DQ  L++  K L ED  T
Sbjct: 128 GGMQIFVKTLTGKTITLAVES--SDKIDNVKAKIQDKEGIPPDQQRLIFADKQL-EDGRT 184

Query: 119 MTSMNIKSESIIHLVF 134
           +   NI+ ES +HLV 
Sbjct: 185 LADYNIQKESTLHLVL 200



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/165 (36%), Positives = 86/165 (52%), Gaps = 9/165 (5%)

Query: 271 YGIKNNYVLDVLP--SP-FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQS 327
           +G  N  +    P  +P  QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q 
Sbjct: 36  FGTDNGPISGTKPHATPSMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 95

Query: 328 IVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMA 387
           ++FAGK+L +   LA YNIQK STLH+VL     +          +I+L++  S+  +  
Sbjct: 96  LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLAVESSDKIDNV 155

Query: 388 KVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 156 KAKIQDKEGIPPDQQRLIFADKQLEDGRTLADYNIQKESTLHLVL 200


>gi|40647164|gb|AAR88388.1| polyubiquitin 3, partial [Plasmodiophora brassicae]
          Length = 175

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 93/170 (54%), Gaps = 5/170 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHF-LHQN 58
           + V   + I+ +KA I  KEGI  D   L FAG +LE GR L DY I+  STLH  L   
Sbjct: 8   LDVDSGDTIETVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 67

Query: 59  LSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
              M++FVK  T +T T ++      ++ +K  IQ KEGI  DQ  L++ GK L ED  T
Sbjct: 68  GGTMQIFVKTLTGKTIT-LDVDSGDAIETVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 125

Query: 119 MTSMNIKSESIIHLVFCPK-EILSIFVKAATGEIVNLEVKHSFAIRDVKA 167
           +   NI+ ES +HLV   +   + IFVK  TG+ + L+V     I  VKA
Sbjct: 126 LADYNIQKESTLHLVLRLRGGTMQIFVKTLTGKTITLDVDSGDTIETVKA 175



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 52/109 (47%), Positives = 67/109 (61%), Gaps = 4/109 (3%)

Query: 252 NQDLFYAGTKLEACKTLASYGIKN----NYVLDVLPSPFQIFVKTWGGKTITLDVQPYNT 307
            Q L +AG +LE  +TLA Y I+     + VL +     QIFVKT  GKTITLDV   + 
Sbjct: 33  QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMQIFVKTLTGKTITLDVDSGDA 92

Query: 308 VQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           ++ VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 93  IETVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 141



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/161 (36%), Positives = 91/161 (56%), Gaps = 6/161 (3%)

Query: 84  TVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKE-ILSI 142
           T++ +K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +   + I
Sbjct: 15  TIETVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGTMQI 73

Query: 143 FVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKD 202
           FVK  TG+ + L+V    AI  VKA +    G+      +I+ GK+LED +TLA Y+++ 
Sbjct: 74  FVKTLTGKTITLDVDSGDAIETVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 133

Query: 203 EC----LLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVK 239
           E     +L +   ++QIFV+T   + + L+V+    +  VK
Sbjct: 134 ESTLHLVLRLRGGTMQIFVKTLTGKTITLDVDSGDTIETVK 174



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/174 (34%), Positives = 94/174 (54%), Gaps = 8/174 (4%)

Query: 148 TGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDEC--- 204
           TG+ + L+V     I  VKA +    G+      +I+ GK+LED +TLA Y+++ E    
Sbjct: 2   TGKTITLDVDSGDTIETVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 61

Query: 205 -LLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLE 263
            +L +   ++QIFV+T   + + L+V+    +  VK  + +   +    Q L +AG +LE
Sbjct: 62  LVLRLRGGTMQIFVKTLTGKTITLDVDSGDAIETVKAKIQDKEGIPPDQQRLIFAGKQLE 121

Query: 264 ACKTLASYGIKN----NYVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
             +TLA Y I+     + VL +     QIFVKT  GKTITLDV   +T++ VK 
Sbjct: 122 DGRTLADYNIQKESTLHLVLRLRGGTMQIFVKTLTGKTITLDVDSGDTIETVKA 175



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/127 (38%), Positives = 69/127 (54%), Gaps = 7/127 (5%)

Query: 295 GKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHM 354
           GKTITLDV   +T++ VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+
Sbjct: 3   GKTITLDVDSGDTIETVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 62

Query: 355 VLAPSSRIIELPL-IFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           VL      +++ +      +I+L +   +  E  K K Q         + L+     L+D
Sbjct: 63  VLRLRGGTMQIFVKTLTGKTITLDVDSGDAIETVKAKIQDKEGIPPDQQRLIFAGKQLED 122

Query: 408 DRTLADY 414
            RTLADY
Sbjct: 123 GRTLADY 129


>gi|290991538|ref|XP_002678392.1| polyubiquitin [Naegleria gruberi]
 gi|284092004|gb|EFC45648.1| polyubiquitin [Naegleria gruberi]
          Length = 152

 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 90/147 (61%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +Q+FV+T     + LEVE    + +VK+ V +   +S   Q L +AG +LE  +T+  Y 
Sbjct: 1   MQLFVKTLTGRTITLEVESNDSIENVKQKVQDKEGISPDQQRLIFAGKQLEDGRTINDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+ +  L +   L    Q+FVKT  GKTIT++++  +TV+++K K+FDK   P   Q ++
Sbjct: 61  IQKDSTLHLVLRLRGGMQLFVKTLTGKTITIEMESNDTVENMKQKIFDKEGIPSDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           +AGK+L +   +  YN+QK ST+H+VL
Sbjct: 121 YAGKQLEDGRTIGDYNLQKDSTVHLVL 147



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 59/135 (43%), Positives = 84/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGRLV-DYGIRNNSTLHFLHQNL 59
           ++V+ ++ I+N+K  +  KEGIS D   L FAG +LE GR + DY I+ +STLH + +  
Sbjct: 15  LEVESNDSIENVKQKVQDKEGISPDQQRLIFAGKQLEDGRTINDYNIQKDSTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M+LFVK  T +T T +E     TV+N+K  I  KEGI SDQ  L+Y GK L ED  T+
Sbjct: 75  GGMQLFVKTLTGKTIT-IEMESNDTVENMKQKIFDKEGIPSDQQRLIYAGKQL-EDGRTI 132

Query: 120 TSMNIKSESIIHLVF 134
              N++ +S +HLV 
Sbjct: 133 GDYNLQKDSTVHLVL 147



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 87/147 (59%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M+LFVK  T +T T+ E     +++N+K  +Q KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQLFVKTLTGRTITL-EVESNDSIENVKQKVQDKEGISPDQQRLIFAGKQL-EDGRTIND 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ +S +HLV   +  + +FVK  TG+ + +E++ +  + ++K  +    G+ +    
Sbjct: 59  YNIQKDSTLHLVLRLRGGMQLFVKTLTGKTITIEMESNDTVENMKQKIFDKEGIPSDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +IY GK+LED +T+  Y+++ +  + +
Sbjct: 119 LIYAGKQLEDGRTIGDYNLQKDSTVHL 145



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 76/147 (51%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            Q+FVKT  G+TITL+V+  +++++VK K+ DK       Q ++FAGK+L +   +  YN
Sbjct: 1   MQLFVKTLTGRTITLEVESNDSIENVKQKVQDKEGISPDQQRLIFAGKQLEDGRTINDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKF------QAAVKELL 399
           IQK STLH+VL     +          +I++ +  ++  E  K K        +  + L+
Sbjct: 61  IQKDSTLHLVLRLRGGMQLFVKTLTGKTITIEMESNDTVENMKQKIFDKEGIPSDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RT+ DY +     V LV 
Sbjct: 121 YAGKQLEDGRTIGDYNLQKDSTVHLVL 147


>gi|27734379|gb|AAM51218.1| polyubiquitin [Cercomonas sp. ATCC 50316]
          Length = 177

 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 69/171 (40%), Positives = 97/171 (56%), Gaps = 7/171 (4%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL--HQ 57
           +  + S+ I+ +K  I  KEGI  D   L FAG +LE GR L DY I+  STLH +   +
Sbjct: 8   LDAESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 67

Query: 58  NLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTA 117
             S M++FVK  T +T T ++     T++ +K  IQ KEGI  DQ  L++ GK L ED  
Sbjct: 68  GGSGMQIFVKTLTGKTIT-LDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQL-EDGR 125

Query: 118 TMTSMNIKSESIIHLVFCPK--EILSIFVKAATGEIVNLEVKHSFAIRDVK 166
           T+   NI+ ES +HLV   +    + IFVK  TG+ + L+V+ S  I  VK
Sbjct: 126 TLADYNIQKESTLHLVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVK 176



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 57/137 (41%), Positives = 80/137 (58%), Gaps = 5/137 (3%)

Query: 225 VRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVL-- 282
           + L+ E    +  VK+ + +   +    Q L +AG +LE  +TLA Y I+    L ++  
Sbjct: 6   ITLDAESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 65

Query: 283 ---PSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENH 339
               S  QIFVKT  GKTITLDV+  +T++ VK K+ DK   P   Q ++FAGK+L +  
Sbjct: 66  LRGGSGMQIFVKTLTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGR 125

Query: 340 VLARYNIQKHSTLHMVL 356
            LA YNIQK STLH+VL
Sbjct: 126 TLADYNIQKESTLHLVL 142



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/175 (34%), Positives = 95/175 (54%), Gaps = 10/175 (5%)

Query: 148 TGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLE 207
           TG+ + L+ + S  I  VK  +    G+      +I+ GK+LED +TLA Y+++ E  L 
Sbjct: 2   TGKTITLDAESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 61

Query: 208 MF-----PSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKL 262
           +       S +QIFV+T   + + L+VE    +  VK+ + +   +    Q L +AG +L
Sbjct: 62  LVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQL 121

Query: 263 EACKTLASYGIKNNYVLDVL-----PSPFQIFVKTWGGKTITLDVQPYNTVQDVK 312
           E  +TLA Y I+    L ++      S  QIFVKT  GKTITLDV+  +T++ VK
Sbjct: 122 EDGRTLADYNIQKESTLHLVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVK 176



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 64/178 (35%), Positives = 98/178 (55%), Gaps = 9/178 (5%)

Query: 70  TNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESI 129
           T +T T+ +A    T++ +K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES 
Sbjct: 2   TGKTITL-DAESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKEST 59

Query: 130 IHLVFCPK--EILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGK 187
           +HLV   +    + IFVK  TG+ + L+V+ S  I  VK  +    G+      +I+ GK
Sbjct: 60  LHLVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGK 119

Query: 188 KLEDSKTLAFYDMKDECLLEMF-----PSSIQIFVRTPIEEIVRLEVEVLIVVRDVKE 240
           +LED +TLA Y+++ E  L +       S +QIFV+T   + + L+VE    +  VK+
Sbjct: 120 QLEDGRTLADYNIQKESTLHLVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVKQ 177



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/128 (39%), Positives = 68/128 (53%), Gaps = 8/128 (6%)

Query: 295 GKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHM 354
           GKTITLD +  +T++ VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+
Sbjct: 3   GKTITLDAESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 62

Query: 355 V--LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQ 406
           V  L   S +          +I+L +  S+  E  K K Q         + L+     L+
Sbjct: 63  VLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLE 122

Query: 407 DDRTLADY 414
           D RTLADY
Sbjct: 123 DGRTLADY 130


>gi|346321308|gb|EGX90907.1| RING and UBP finger domain protein [Cordyceps militaris CM01]
          Length = 776

 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 59/145 (40%), Positives = 86/145 (59%), Gaps = 3/145 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHM 354
           FAGK+L +   L+ YNIQK STLH+
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 58/148 (39%), Positives = 90/148 (60%), Gaps = 2/148 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEMF 209
           +I+ GK+LED +TL+ Y+++ E  L ++
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLY 146



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 59/133 (44%), Positives = 82/133 (61%), Gaps = 3/133 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHL 132
           +  NI+ ES +HL
Sbjct: 133 SDYNIQKESTLHL 145



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/139 (39%), Positives = 78/139 (56%), Gaps = 14/139 (10%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFI----DPSISLSISISEVKEMAKVKFQ------AAV 395
           IQK STLH+VL    R+     IF+      +I+L +  S+  +  K K Q         
Sbjct: 61  IQKESTLHLVL----RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 116

Query: 396 KELLVDQVALQDDRTLADY 414
           + L+     L+D RTL+DY
Sbjct: 117 QRLIFAGKQLEDGRTLSDY 135


>gi|290971454|ref|XP_002668516.1| polyubiquitin [Naegleria gruberi]
 gi|290992572|ref|XP_002678908.1| polyubiquitin [Naegleria gruberi]
 gi|284081958|gb|EFC35772.1| polyubiquitin [Naegleria gruberi]
 gi|284092522|gb|EFC46164.1| polyubiquitin [Naegleria gruberi]
          Length = 152

 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 90/147 (61%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +Q+FV+T   + + LEVE    + +VK  V +   +    Q L YAG +LE  +T+  Y 
Sbjct: 1   MQLFVKTLTGKTITLEVESNDSIENVKRKVQDKEGIPPEQQRLIYAGKQLEDGRTINDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+ +  L +   L    Q+FVKT  GKTIT++++  +T+Q++K K+FDK   P   Q ++
Sbjct: 61  IQKDSTLHLVLRLRGGMQLFVKTLTGKTITIEMESNDTIQNMKQKIFDKEGIPSDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           +AGK+L +   L+ YN+QK ST+H+VL
Sbjct: 121 YAGKQLEDGRQLSDYNLQKDSTVHLVL 147



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/135 (40%), Positives = 83/135 (61%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGRLV-DYGIRNNSTLHFLHQNL 59
           ++V+ ++ I+N+K  +  KEGI  +   L +AG +LE GR + DY I+ +STLH + +  
Sbjct: 15  LEVESNDSIENVKRKVQDKEGIPPEQQRLIYAGKQLEDGRTINDYNIQKDSTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M+LFVK  T +T T +E     T+QN+K  I  KEGI SDQ  L+Y GK L ED   +
Sbjct: 75  GGMQLFVKTLTGKTIT-IEMESNDTIQNMKQKIFDKEGIPSDQQRLIYAGKQL-EDGRQL 132

Query: 120 TSMNIKSESIIHLVF 134
           +  N++ +S +HLV 
Sbjct: 133 SDYNLQKDSTVHLVL 147



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 88/147 (59%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M+LFVK  T +T T+ E     +++N+K  +Q KEGI  +Q  L+Y GK L ED  T+  
Sbjct: 1   MQLFVKTLTGKTITL-EVESNDSIENVKRKVQDKEGIPPEQQRLIYAGKQL-EDGRTIND 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ +S +HLV   +  + +FVK  TG+ + +E++ +  I+++K  +    G+ +    
Sbjct: 59  YNIQKDSTLHLVLRLRGGMQLFVKTLTGKTITIEMESNDTIQNMKQKIFDKEGIPSDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +IY GK+LED + L+ Y+++ +  + +
Sbjct: 119 LIYAGKQLEDGRQLSDYNLQKDSTVHL 145



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 77/147 (52%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            Q+FVKT  GKTITL+V+  +++++VK K+ DK   P   Q +++AGK+L +   +  YN
Sbjct: 1   MQLFVKTLTGKTITLEVESNDSIENVKRKVQDKEGIPPEQQRLIYAGKQLEDGRTINDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKF------QAAVKELL 399
           IQK STLH+VL     +          +I++ +  ++  +  K K        +  + L+
Sbjct: 61  IQKDSTLHLVLRLRGGMQLFVKTLTGKTITIEMESNDTIQNMKQKIFDKEGIPSDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D R L+DY +     V LV 
Sbjct: 121 YAGKQLEDGRQLSDYNLQKDSTVHLVL 147


>gi|290971589|ref|XP_002668572.1| polyubiquitin [Naegleria gruberi]
 gi|290973569|ref|XP_002669520.1| polyubiquitin [Naegleria gruberi]
 gi|290982657|ref|XP_002674046.1| polyubiquitin [Naegleria gruberi]
 gi|290987245|ref|XP_002676333.1| polyubiquitin [Naegleria gruberi]
 gi|290987329|ref|XP_002676375.1| polyubiquitin [Naegleria gruberi]
 gi|290997377|ref|XP_002681258.1| polyubiquitin [Naegleria gruberi]
 gi|284082037|gb|EFC35828.1| polyubiquitin [Naegleria gruberi]
 gi|284083069|gb|EFC36776.1| polyubiquitin [Naegleria gruberi]
 gi|284087634|gb|EFC41302.1| polyubiquitin [Naegleria gruberi]
 gi|284089935|gb|EFC43589.1| polyubiquitin [Naegleria gruberi]
 gi|284089977|gb|EFC43631.1| polyubiquitin [Naegleria gruberi]
 gi|284094881|gb|EFC48514.1| polyubiquitin [Naegleria gruberi]
          Length = 152

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 89/147 (60%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +Q+FV+T     + LEVE    + +VK  V +   +S   Q L +AG +LE  +T+  Y 
Sbjct: 1   MQLFVKTLTGRTITLEVESNDSIENVKRKVQDKEGISPDQQRLIFAGKQLEDGRTINDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+ +  L +   L    Q+FVKT  GKTIT++++  +TV+++K K+FDK   P   Q ++
Sbjct: 61  IQKDSTLHLVLRLRGGMQLFVKTLTGKTITIEMESNDTVENMKQKIFDKEGIPSDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           +AGK+L +   +  YN+QK ST+H+VL
Sbjct: 121 YAGKQLEDGRTIGDYNLQKDSTVHLVL 147



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 59/135 (43%), Positives = 84/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGRLV-DYGIRNNSTLHFLHQNL 59
           ++V+ ++ I+N+K  +  KEGIS D   L FAG +LE GR + DY I+ +STLH + +  
Sbjct: 15  LEVESNDSIENVKRKVQDKEGISPDQQRLIFAGKQLEDGRTINDYNIQKDSTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M+LFVK  T +T T +E     TV+N+K  I  KEGI SDQ  L+Y GK L ED  T+
Sbjct: 75  GGMQLFVKTLTGKTIT-IEMESNDTVENMKQKIFDKEGIPSDQQRLIYAGKQL-EDGRTI 132

Query: 120 TSMNIKSESIIHLVF 134
              N++ +S +HLV 
Sbjct: 133 GDYNLQKDSTVHLVL 147



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 87/147 (59%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M+LFVK  T +T T+ E     +++N+K  +Q KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQLFVKTLTGRTITL-EVESNDSIENVKRKVQDKEGISPDQQRLIFAGKQL-EDGRTIND 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ +S +HLV   +  + +FVK  TG+ + +E++ +  + ++K  +    G+ +    
Sbjct: 59  YNIQKDSTLHLVLRLRGGMQLFVKTLTGKTITIEMESNDTVENMKQKIFDKEGIPSDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +IY GK+LED +T+  Y+++ +  + +
Sbjct: 119 LIYAGKQLEDGRTIGDYNLQKDSTVHL 145



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 76/147 (51%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            Q+FVKT  G+TITL+V+  +++++VK K+ DK       Q ++FAGK+L +   +  YN
Sbjct: 1   MQLFVKTLTGRTITLEVESNDSIENVKRKVQDKEGISPDQQRLIFAGKQLEDGRTINDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKF------QAAVKELL 399
           IQK STLH+VL     +          +I++ +  ++  E  K K        +  + L+
Sbjct: 61  IQKDSTLHLVLRLRGGMQLFVKTLTGKTITIEMESNDTVENMKQKIFDKEGIPSDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RT+ DY +     V LV 
Sbjct: 121 YAGKQLEDGRTIGDYNLQKDSTVHLVL 147


>gi|290983078|ref|XP_002674256.1| polyubiquitin [Naegleria gruberi]
 gi|284087845|gb|EFC41512.1| polyubiquitin [Naegleria gruberi]
          Length = 152

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 90/147 (61%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +Q+FV+T     + LEVE    + +VK  V +   +S   Q L +AG +LE  +T+  Y 
Sbjct: 1   MQLFVKTLTGRTITLEVESNDSIENVKRKVQDKEGISPDQQRLIFAGKQLEDGRTINDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+ +  L +   L    Q+FVKT  GKTIT++++  +TV+++K K+FDK   P   Q ++
Sbjct: 61  IQKDSTLHLVLRLRGGMQLFVKTLTGKTITIEMESIDTVENMKQKIFDKEGIPSDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           +AGK+L +   ++ YN+QK ST+H+VL
Sbjct: 121 YAGKQLEDGRTISDYNLQKDSTVHLVL 147



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/135 (43%), Positives = 85/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGRLV-DYGIRNNSTLHFLHQNL 59
           ++V+ ++ I+N+K  +  KEGIS D   L FAG +LE GR + DY I+ +STLH + +  
Sbjct: 15  LEVESNDSIENVKRKVQDKEGISPDQQRLIFAGKQLEDGRTINDYNIQKDSTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M+LFVK  T +T T +E     TV+N+K  I  KEGI SDQ  L+Y GK L ED  T+
Sbjct: 75  GGMQLFVKTLTGKTIT-IEMESIDTVENMKQKIFDKEGIPSDQQRLIYAGKQL-EDGRTI 132

Query: 120 TSMNIKSESIIHLVF 134
           +  N++ +S +HLV 
Sbjct: 133 SDYNLQKDSTVHLVL 147



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 87/147 (59%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M+LFVK  T +T T+ E     +++N+K  +Q KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQLFVKTLTGRTITL-EVESNDSIENVKRKVQDKEGISPDQQRLIFAGKQL-EDGRTIND 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ +S +HLV   +  + +FVK  TG+ + +E++    + ++K  +    G+ +    
Sbjct: 59  YNIQKDSTLHLVLRLRGGMQLFVKTLTGKTITIEMESIDTVENMKQKIFDKEGIPSDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +IY GK+LED +T++ Y+++ +  + +
Sbjct: 119 LIYAGKQLEDGRTISDYNLQKDSTVHL 145



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 79/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            Q+FVKT  G+TITL+V+  +++++VK K+ DK       Q ++FAGK+L +   +  YN
Sbjct: 1   MQLFVKTLTGRTITLEVESNDSIENVKRKVQDKEGISPDQQRLIFAGKQLEDGRTINDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSI-SISEVKEMAKVKFQ-----AAVKELL 399
           IQK STLH+VL     +          +I++ + SI  V+ M +  F      +  + L+
Sbjct: 61  IQKDSTLHLVLRLRGGMQLFVKTLTGKTITIEMESIDTVENMKQKIFDKEGIPSDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RT++DY +     V LV 
Sbjct: 121 YAGKQLEDGRTISDYNLQKDSTVHLVL 147


>gi|27734341|gb|AAM51199.1| polyubiquitin [Lotharella amoeboformis]
          Length = 175

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/169 (41%), Positives = 92/169 (54%), Gaps = 5/169 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHF-LHQN 58
           + V  S+ I  +K  I  KEGI  D   L FAG +LE GR L DY I+  STLH  L   
Sbjct: 8   LDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 67

Query: 59  LSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
              M++FVK  T +T T ++     T+  +K  IQ KEGI  DQ  L++ GK L ED  T
Sbjct: 68  GGAMQIFVKTLTGKTIT-LDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRT 125

Query: 119 MTSMNIKSESIIHLVFCPK-EILSIFVKAATGEIVNLEVKHSFAIRDVK 166
           +   NI+ ES +HLV   +   + IFVK  TG+ + L+V  S  I  VK
Sbjct: 126 LADYNIQKESTLHLVLRLRGGSMQIFVKTLTGKTITLDVDSSDTINTVK 174



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/138 (41%), Positives = 80/138 (57%), Gaps = 4/138 (2%)

Query: 223 EIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKN----NYV 278
           + + L+V+    +  VK+ + +   +    Q L +AG +LE  +TLA Y I+     + V
Sbjct: 4   KTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 63

Query: 279 LDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFEN 338
           L +     QIFVKT  GKTITLDV   +T+  VK K+ DK   P   Q ++FAGK+L + 
Sbjct: 64  LRLRGGAMQIFVKTLTGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDG 123

Query: 339 HVLARYNIQKHSTLHMVL 356
             LA YNIQK STLH+VL
Sbjct: 124 RTLADYNIQKESTLHLVL 141



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/173 (34%), Positives = 94/173 (54%), Gaps = 8/173 (4%)

Query: 148 TGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDEC--- 204
           TG+ + L+V  S  I  VK  +    G+      +I+ GK+LED +TLA Y+++ E    
Sbjct: 2   TGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 61

Query: 205 -LLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLE 263
            +L +   ++QIFV+T   + + L+V+    +  VK+ + +   +    Q L +AG +LE
Sbjct: 62  LVLRLRGGAMQIFVKTLTGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLE 121

Query: 264 ACKTLASYGIKN----NYVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVK 312
             +TLA Y I+     + VL +     QIFVKT  GKTITLDV   +T+  VK
Sbjct: 122 DGRTLADYNIQKESTLHLVLRLRGGSMQIFVKTLTGKTITLDVDSSDTINTVK 174



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/162 (36%), Positives = 90/162 (55%), Gaps = 6/162 (3%)

Query: 84  TVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKE-ILSI 142
           T+  +K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +   + I
Sbjct: 15  TINTVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGAMQI 73

Query: 143 FVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKD 202
           FVK  TG+ + L+V  S  I  VK  +    G+      +I+ GK+LED +TLA Y+++ 
Sbjct: 74  FVKTLTGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 133

Query: 203 EC----LLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKE 240
           E     +L +   S+QIFV+T   + + L+V+    +  VK+
Sbjct: 134 ESTLHLVLRLRGGSMQIFVKTLTGKTITLDVDSSDTINTVKQ 175



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/139 (36%), Positives = 72/139 (51%), Gaps = 7/139 (5%)

Query: 295 GKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHM 354
           GKTITLDV   +T+  VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+
Sbjct: 3   GKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 62

Query: 355 VLAPSSRIIELPL-IFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           VL      +++ +      +I+L +  S+     K K Q         + L+     L+D
Sbjct: 63  VLRLRGGAMQIFVKTLTGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLED 122

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 123 GRTLADYNIQKESTLHLVL 141


>gi|4150914|emb|CAA72800.1| polyubiquitin precursor [Suberites domuncula]
          Length = 147

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 84/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 9   LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 68

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 69  GGMQIFVKTLTGKTIT-LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 126

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 127 SDYNIQKESTLHLVL 141



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/135 (41%), Positives = 81/135 (60%), Gaps = 3/135 (2%)

Query: 225 VRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV--- 281
           + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   
Sbjct: 7   ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 66

Query: 282 LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVL 341
           L    QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L
Sbjct: 67  LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 126

Query: 342 ARYNIQKHSTLHMVL 356
           + YNIQK STLH+VL
Sbjct: 127 SDYNIQKESTLHLVL 141



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 55/139 (39%), Positives = 83/139 (59%), Gaps = 2/139 (1%)

Query: 70  TNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESI 129
           T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES 
Sbjct: 3   TGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKEST 60

Query: 130 IHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKL 189
           +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+L
Sbjct: 61  LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 120

Query: 190 EDSKTLAFYDMKDECLLEM 208
           ED +TL+ Y+++ E  L +
Sbjct: 121 EDGRTLSDYNIQKESTLHL 139



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 74/141 (52%), Gaps = 6/141 (4%)

Query: 292 TWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHST 351
           T  GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK ST
Sbjct: 1   TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 60

Query: 352 LHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVAL 405
           LH+VL     +          +I+L +  S+  E  K K Q         + L+     L
Sbjct: 61  LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 120

Query: 406 QDDRTLADYGMDLSEKVVLVF 426
           +D RTL+DY +     + LV 
Sbjct: 121 EDGRTLSDYNIQKESTLHLVL 141



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 73/135 (54%), Gaps = 3/135 (2%)

Query: 148 TGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLE 207
           TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+++ E  L 
Sbjct: 3   TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 62

Query: 208 M---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEA 264
           +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE 
Sbjct: 63  LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 122

Query: 265 CKTLASYGIKNNYVL 279
            +TL+ Y I+    L
Sbjct: 123 GRTLSDYNIQKESTL 137


>gi|339232996|ref|XP_003381615.1| ubiquitin family protein [Trichinella spiralis]
 gi|316979549|gb|EFV62331.1| ubiquitin family protein [Trichinella spiralis]
          Length = 189

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/168 (39%), Positives = 90/168 (53%), Gaps = 3/168 (1%)

Query: 3   VKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSE 61
           V  S+ I+N K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +    
Sbjct: 15  VHPSDSIENEKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 74

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 75  MQIFVKTLTGKTIT-LEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 132

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIV 169
            NI+ ES +HLV   +  +  F K     I  +E   +        +V
Sbjct: 133 YNIQKESTLHLVLRLRGGMRNFGKTDQTAISEVESSRTIGCESSWTVV 180



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/108 (47%), Positives = 70/108 (64%), Gaps = 3/108 (2%)

Query: 252 NQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTV 308
            Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+
Sbjct: 38  QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTI 97

Query: 309 QDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           ++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 98  ENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 145



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 53/140 (37%), Positives = 80/140 (57%), Gaps = 3/140 (2%)

Query: 69  PTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSES 128
           P  Q   +V   P  +++N K  IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES
Sbjct: 7   PEGQRRALVH--PSDSIENEKGKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKES 63

Query: 129 IIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKK 188
            +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+
Sbjct: 64  TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQ 123

Query: 189 LEDSKTLAFYDMKDECLLEM 208
           LED +TL+ Y+++ E  L +
Sbjct: 124 LEDGRTLSDYNIQKESTLHL 143



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 6/131 (4%)

Query: 302 VQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSR 361
           V P +++++ K K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     
Sbjct: 15  VHPSDSIENEKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 74

Query: 362 IIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYG 415
           +          +I+L +  S+  E  K K Q         + L+     L+D RTL+DY 
Sbjct: 75  MQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 134

Query: 416 MDLSEKVVLVF 426
           +     + LV 
Sbjct: 135 IQKESTLHLVL 145



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 3/127 (2%)

Query: 156 VKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSS 212
           V  S +I + K  +    G+      +I+ GK+LED +TL+ Y+++ E  L +       
Sbjct: 15  VHPSDSIENEKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 74

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 75  MQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 134

Query: 273 IKNNYVL 279
           I+    L
Sbjct: 135 IQKESTL 141



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/75 (45%), Positives = 46/75 (61%), Gaps = 3/75 (4%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 89  LEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 148

Query: 60  SEMKLFVKIPTNQTA 74
             M+ F K  T+QTA
Sbjct: 149 GGMRNFGK--TDQTA 161


>gi|319996466|dbj|BAJ61942.1| ubiquitin [Nymphaea hybrid cultivar]
          Length = 146

 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 85/143 (59%), Gaps = 2/143 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDEC 204
           +I+ GK+LED +TLA Y+++ E 
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKES 141



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/142 (41%), Positives = 83/142 (58%), Gaps = 3/142 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHST 351
           FAGK+L +   LA YNIQK ST
Sbjct: 121 FAGKQLEDGRTLADYNIQKEST 142



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/133 (44%), Positives = 78/133 (58%), Gaps = 3/133 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHL 132
              NI+ ES   L
Sbjct: 133 ADYNIQKESTSTL 145



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 54/137 (39%), Positives = 75/137 (54%), Gaps = 6/137 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  +  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGM 416
                L+D RTLADY +
Sbjct: 121 FAGKQLEDGRTLADYNI 137



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/138 (35%), Positives = 77/138 (55%), Gaps = 3/138 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIK 274
           +AG +LE  +TLA Y I+
Sbjct: 121 FAGKQLEDGRTLADYNIQ 138


>gi|297606344|ref|NP_001058338.2| Os06g0673500 [Oryza sativa Japonica Group]
 gi|52077254|dbj|BAD46297.1| pentameric polyubiquitin-like [Oryza sativa Japonica Group]
 gi|52077458|dbj|BAD46688.1| pentameric polyubiquitin-like [Oryza sativa Japonica Group]
 gi|255677314|dbj|BAF20252.2| Os06g0673500 [Oryza sativa Japonica Group]
          Length = 187

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 85/147 (57%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL V+  + + +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLAVESSDKIDNVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FA K+L +   LA YNIQK STLH+VL
Sbjct: 121 FADKQLEDGRTLADYNIQKESTLHLVL 147



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 58/147 (39%), Positives = 85/147 (57%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + L V+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLAVESSDKIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+  K+LED +TLA Y+++ E  L +
Sbjct: 119 LIFADKQLEDGRTLADYNIQKESTLHL 145



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 60/136 (44%), Positives = 81/136 (59%), Gaps = 5/136 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
             M++FVK  T +T T+ VE+     + N+K  IQ KEGI  DQ  L++  K L ED  T
Sbjct: 75  GGMQIFVKTLTGKTITLAVES--SDKIDNVKAKIQDKEGIPPDQQRLIFADKQL-EDGRT 131

Query: 119 MTSMNIKSESIIHLVF 134
           +   NI+ ES +HLV 
Sbjct: 132 LADYNIQKESTLHLVL 147



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/146 (38%), Positives = 79/146 (54%), Gaps = 6/146 (4%)

Query: 287 QIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNI 346
           QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNI
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61

Query: 347 QKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLV 400
           QK STLH+VL     +          +I+L++  S+  +  K K Q         + L+ 
Sbjct: 62  QKESTLHLVLRLRGGMQIFVKTLTGKTITLAVESSDKIDNVKAKIQDKEGIPPDQQRLIF 121

Query: 401 DQVALQDDRTLADYGMDLSEKVVLVF 426
               L+D RTLADY +     + LV 
Sbjct: 122 ADKQLEDGRTLADYNIQKESTLHLVL 147


>gi|218200585|gb|EEC83012.1| hypothetical protein OsI_28070 [Oryza sativa Indica Group]
          Length = 254

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/237 (35%), Positives = 120/237 (50%), Gaps = 22/237 (9%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGV-SAADHIM-IYEG-KKLEDS-KTL 195
           + I VK  TG  + LEV+ S  I DVKA +   VG+ S   H++ +  G K+L+D   TL
Sbjct: 1   MQIIVKTLTGITITLEVRPSDTIDDVKAKIQDKVGIRSDQQHLVDVSAGSKQLDDGGSTL 60

Query: 196 AFYDMKDECLLEMFP------SSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLS 249
           A YD+ DE  L +          ++I V+    EIV L     I      + V  I    
Sbjct: 61  ADYDIHDESTLHLVQVLLGDHGEVRIVVKAIDGEIVTLGAADAIDD--DHDDVEAIGGGG 118

Query: 250 LGNQDLFYAGTK------LEACKTLASYGIKN----NYVLDVLPSPFQIFVKTWGGKTIT 299
            G+  L  +G +      +  C+    + + N     + + +     QIFVKT  GK+IT
Sbjct: 119 GGSTSLAASGLRESVWLMVRVCRMAGVFSVSNLAGVAWRVGLCALAMQIFVKTLTGKSIT 178

Query: 300 LDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           L+V+  +T+ +VK K+ DK   P   Q ++FAGK+L E   LA YNIQK STLH+VL
Sbjct: 179 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVL 235



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 107/237 (45%), Gaps = 25/237 (10%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLV---YDGKLLKEDTAT 118
           M++ VK  T  T T+ E  P  T+ ++K  IQ K GI+SDQ  LV      K L +  +T
Sbjct: 1   MQIIVKTLTGITITL-EVRPSDTIDDVKAKIQDKVGIRSDQQHLVDVSAGSKQLDDGGST 59

Query: 119 MTSMNIKSESIIHLV---FCPKEILSIFVKAATGEIVNL--EVKHSFAIRDVKAIVG--- 170
           +   +I  ES +HLV         + I VKA  GEIV L           DV+AI G   
Sbjct: 60  LADYDIHDESTLHLVQVLLGDHGEVRIVVKAIDGEIVTLGAADAIDDDHDDVEAIGGGGG 119

Query: 171 -----SVVGVSAADHIMIYEGK--KLEDSKTLAFYDMK-DECLLEMFPSSIQIFVRTPIE 222
                +  G+  +  +M+   +   +     LA    +   C L M     QIFV+T   
Sbjct: 120 GSTSLAASGLRESVWLMVRVCRMAGVFSVSNLAGVAWRVGLCALAM-----QIFVKTLTG 174

Query: 223 EIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 175 KSITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTL 231



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 2/73 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T ++ T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L E+  T+  
Sbjct: 165 MQIFVKTLTGKSITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EEGRTLAD 222

Query: 122 MNIKSESIIHLVF 134
            NI+ ES +HLV 
Sbjct: 223 YNIQKESTLHLVL 235



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 179 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLV 234


>gi|357116845|ref|XP_003560187.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin-60S ribosomal protein
           L40-like [Brachypodium distachyon]
          Length = 213

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 87/147 (59%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE   ++ +VK  + +   +    Q L +AG +L+  +TLA   
Sbjct: 1   MQIFVKTLTGKTITLEVESSDIIDNVKTKIQDKEGIPPEQQRLIFAGKQLDNGRTLADCN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L     IFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLQGRMXIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   LA YNIQK STLH+VL
Sbjct: 121 FAGKQLDDGRTLADYNIQKESTLHLVL 147



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 87/147 (59%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E      + N+KT IQ KEGI  +Q  L++ GK L ++  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDIIDNVKTKIQDKEGIPPEQQRLIFAGKQL-DNGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  CNIQKESTLHLVLRLQGRMXIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+L+D +TLA Y+++ E  L +
Sbjct: 119 LIFAGKQLDDGRTLADYNIQKESTLHL 145



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/135 (41%), Positives = 78/135 (57%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K  I  KEGI  +   L FAG +L+ GR L D  I+  STLH + +  
Sbjct: 15  LEVESSDIIDNVKTKIQDKEGIPPEQQRLIFAGKQLDNGRTLADCNIQKESTLHLVLRLQ 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M +FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L +D  T+
Sbjct: 75  GRMXIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-DDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
              NI+ ES +HLV 
Sbjct: 133 ADYNIQKESTLHLVL 147



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 75/147 (51%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  + + +VK K+ DK   P   Q ++FAGK+L     LA  N
Sbjct: 1   MQIFVKTLTGKTITLEVESSDIIDNVKTKIQDKEGIPPEQQRLIFAGKQLDNGRTLADCN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL    R+          +I+L +  S+  +  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLQGRMXIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L D RTLADY +     + LV 
Sbjct: 121 FAGKQLDDGRTLADYNIQKESTLHLVL 147


>gi|302393788|sp|P23398.2|UBIQP_STRPU RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|161616|gb|AAA30082.1| ubiquitin, partial [Strongylocentrotus purpuratus]
          Length = 133

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/127 (46%), Positives = 79/127 (62%), Gaps = 3/127 (2%)

Query: 9   IKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVK 67
           I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +    M++FVK
Sbjct: 3   IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVK 62

Query: 68  IPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSE 127
             T +T T+ E  P  +++N+K  IQ KEGI  DQ  L++ GK L ED  T++  NI+ E
Sbjct: 63  TLTGKTITL-EVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKE 120

Query: 128 SIIHLVF 134
           S +HLV 
Sbjct: 121 STLHLVL 127



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/107 (46%), Positives = 70/107 (65%), Gaps = 3/107 (2%)

Query: 253 QDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQ 309
           Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P ++++
Sbjct: 21  QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIE 80

Query: 310 DVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 81  NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 127



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 50/125 (40%), Positives = 78/125 (62%), Gaps = 1/125 (0%)

Query: 84  TVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIF 143
           +++N+K  IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV   +  + IF
Sbjct: 2   SIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIF 60

Query: 144 VKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDE 203
           VK  TG+ + LEV+ S +I +VKA +    G+      +I+ GK+LED +TL+ Y+++ E
Sbjct: 61  VKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 120

Query: 204 CLLEM 208
             L +
Sbjct: 121 STLHL 125



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 65/122 (53%), Gaps = 3/122 (2%)

Query: 161 AIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFV 217
           +I +VKA +    G+      +I+ GK+LED +TL+ Y+++ E  L +       +QIFV
Sbjct: 2   SIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 61

Query: 218 RTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNY 277
           +T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y I+   
Sbjct: 62  KTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 121

Query: 278 VL 279
            L
Sbjct: 122 TL 123



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 6/127 (4%)

Query: 306 NTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIEL 365
           +++++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +   
Sbjct: 1   DSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF 60

Query: 366 PLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLS 419
                  +I+L +  S+  E  K K Q         + L+     L+D RTL+DY +   
Sbjct: 61  VKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 120

Query: 420 EKVVLVF 426
             + LV 
Sbjct: 121 STLHLVL 127



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 71  LEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 126


>gi|290974830|ref|XP_002670147.1| ubiquitin [Naegleria gruberi]
 gi|284083703|gb|EFC37403.1| ubiquitin [Naegleria gruberi]
          Length = 152

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 89/147 (60%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +Q+FV+T     + LEVE    + +VK  V +   +S   Q L +AG +LE  +T+  Y 
Sbjct: 1   MQLFVKTLTGRTITLEVESNDSIENVKRKVQDKEGISPDQQRLIFAGKQLEDGRTINDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+ +  L +   L    Q+FVKT  GKTIT++++  +TV+++K K+FDK   P   Q ++
Sbjct: 61  IQKDSTLHLVLRLRGGMQLFVKTLTGKTITIEMESNDTVENMKQKIFDKEGIPSDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           +AGK+L +   +  YN+QK ST+H+VL
Sbjct: 121 YAGKQLEDGRTINDYNLQKDSTVHLVL 147



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 59/135 (43%), Positives = 84/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGRLV-DYGIRNNSTLHFLHQNL 59
           ++V+ ++ I+N+K  +  KEGIS D   L FAG +LE GR + DY I+ +STLH + +  
Sbjct: 15  LEVESNDSIENVKRKVQDKEGISPDQQRLIFAGKQLEDGRTINDYNIQKDSTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M+LFVK  T +T T +E     TV+N+K  I  KEGI SDQ  L+Y GK L ED  T+
Sbjct: 75  GGMQLFVKTLTGKTIT-IEMESNDTVENMKQKIFDKEGIPSDQQRLIYAGKQL-EDGRTI 132

Query: 120 TSMNIKSESIIHLVF 134
              N++ +S +HLV 
Sbjct: 133 NDYNLQKDSTVHLVL 147



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 87/147 (59%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M+LFVK  T +T T+ E     +++N+K  +Q KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQLFVKTLTGRTITL-EVESNDSIENVKRKVQDKEGISPDQQRLIFAGKQL-EDGRTIND 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ +S +HLV   +  + +FVK  TG+ + +E++ +  + ++K  +    G+ +    
Sbjct: 59  YNIQKDSTLHLVLRLRGGMQLFVKTLTGKTITIEMESNDTVENMKQKIFDKEGIPSDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +IY GK+LED +T+  Y+++ +  + +
Sbjct: 119 LIYAGKQLEDGRTINDYNLQKDSTVHL 145



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 76/147 (51%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            Q+FVKT  G+TITL+V+  +++++VK K+ DK       Q ++FAGK+L +   +  YN
Sbjct: 1   MQLFVKTLTGRTITLEVESNDSIENVKRKVQDKEGISPDQQRLIFAGKQLEDGRTINDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKF------QAAVKELL 399
           IQK STLH+VL     +          +I++ +  ++  E  K K        +  + L+
Sbjct: 61  IQKDSTLHLVLRLRGGMQLFVKTLTGKTITIEMESNDTVENMKQKIFDKEGIPSDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RT+ DY +     V LV 
Sbjct: 121 YAGKQLEDGRTINDYNLQKDSTVHLVL 147


>gi|353230196|emb|CCD76367.1| putative ubiquitin (ribosomal protein L40) [Schistosoma mansoni]
          Length = 247

 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/135 (42%), Positives = 83/135 (61%), Gaps = 2/135 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLA 196
           +I+ GK+LED +TL+
Sbjct: 119 LIFAGKQLEDGRTLS 133



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/126 (44%), Positives = 80/126 (63%), Gaps = 3/126 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIK 125
           + ++I+
Sbjct: 133 SDLHIQ 138



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 86/145 (59%), Gaps = 5/145 (3%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQK--HSTL 352
           FAGK+L +   L+  +IQ+  HS+L
Sbjct: 121 FAGKQLEDGRTLSDLHIQERVHSSL 145



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/134 (39%), Positives = 75/134 (55%), Gaps = 6/134 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLAD 413
                L+D RTL+D
Sbjct: 121 FAGKQLEDGRTLSD 134



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 76/140 (54%), Gaps = 3/140 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNN 276
           +AG +LE  +TL+   I+  
Sbjct: 121 FAGKQLEDGRTLSDLHIQER 140


>gi|281209949|gb|EFA84117.1| UBiQuitin family member isoform 1 [Polysphondylium pallidum PN500]
          Length = 156

 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 58/159 (36%), Positives = 97/159 (61%), Gaps = 7/159 (4%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     +++N+KT IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEGSDSIENVKTKIQDKEGIPPDQQRLIFAGKQL-EDERTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + +FV+  +G+I+ ++VK S  I +VKA V   +G    + I
Sbjct: 59  YNIQKESTLHLVLRLRGGMQVFVETLSGKIITIKVKESDTIENVKAKVTEKLGYPPNEQI 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEMFPSSIQIFVRTP 220
           +I+  KKLE+ +TL  Y+++ E  +      +++++R P
Sbjct: 119 LIFNNKKLENGRTLFDYNIQKESTI-----YLKLWMRDP 152



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 84/147 (57%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEGSDSIENVKTKIQDKEGIPPDQQRLIFAGKQLEDERTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    Q+FV+T  GK IT+ V+  +T+++VK K+ +KL  P + Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQVFVETLSGKIITIKVKESDTIENVKAKVTEKLGYPPNEQILI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           F  K+L     L  YNIQK ST+++ L
Sbjct: 121 FNNKKLENGRTLFDYNIQKESTIYLKL 147



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 54/142 (38%), Positives = 83/142 (58%), Gaps = 16/142 (11%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +++++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEGSDSIENVKTKIQDKEGIPPDQQRLIFAGKQLEDERTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVK-FQAAVKE------- 397
           IQK STLH+VL    R+     +F++ ++S  I   +VKE   ++  +A V E       
Sbjct: 61  IQKESTLHLVL----RLRGGMQVFVE-TLSGKIITIKVKESDTIENVKAKVTEKLGYPPN 115

Query: 398 ---LLVDQVALQDDRTLADYGM 416
              L+ +   L++ RTL DY +
Sbjct: 116 EQILIFNNKKLENGRTLFDYNI 137



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 78/157 (49%), Gaps = 12/157 (7%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S +I +VK  +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEGSDSIENVKTKIQDKEGIPPDQQRLIFAGKQLEDERTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +Q+FV T   +I+ ++V+    + +VK  V   +      Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQVFVETLSGKIITIKVKESDTIENVKAKVTEKLGYPPNEQILI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDVLPSPFQIFVKTW 293
           +   KLE  +TL  Y I+             I++K W
Sbjct: 121 FNNKKLENGRTLFDYNIQKEST---------IYLKLW 148



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/133 (34%), Positives = 76/133 (57%), Gaps = 3/133 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE  R L DY I+  STLH + +  
Sbjct: 15  LEVEGSDSIENVKTKIQDKEGIPPDQQRLIFAGKQLEDERTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FV+  + +  T ++     T++N+K  +  K G   ++  L+++ K L E+  T+
Sbjct: 75  GGMQVFVETLSGKIIT-IKVKESDTIENVKAKVTEKLGYPPNEQILIFNNKKL-ENGRTL 132

Query: 120 TSMNIKSESIIHL 132
              NI+ ES I+L
Sbjct: 133 FDYNIQKESTIYL 145


>gi|145495350|ref|XP_001433668.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124400787|emb|CAK66271.1| unnamed protein product [Paramecium tetraurelia]
          Length = 154

 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 59/147 (40%), Positives = 83/147 (56%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           IQIFV+T   + + L+V+    +  VK  + +   +    Q L +AG +LE  +TL  Y 
Sbjct: 2   IQIFVKTLTGKTITLDVKSEDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLQDYN 61

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVK   GKTITLDV+P  T+  +K K+ DK   P   Q ++
Sbjct: 62  IQKESTLHLVLRLRGGMQIFVKNLSGKTITLDVEPDQTIDMIKSKIQDKEGIPPDQQRLI 121

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L  YNIQK ST+H+VL
Sbjct: 122 FAGKQLEDGRTLGDYNIQKESTIHLVL 148



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/135 (44%), Positives = 79/135 (58%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + VK  + I  +KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 16  LDVKSEDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLQDYNIQKESTLHLVLRLR 75

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  + +T T ++  P  T+  IK+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 76  GGMQIFVKNLSGKTIT-LDVEPDQTIDMIKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 133

Query: 120 TSMNIKSESIIHLVF 134
              NI+ ES IHLV 
Sbjct: 134 GDYNIQKESTIHLVL 148



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/150 (38%), Positives = 79/150 (52%), Gaps = 14/150 (9%)

Query: 287 QIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNI 346
           QIFVKT  GKTITLDV+  +T+  VK K+ DK   P   Q ++FAGK+L +   L  YNI
Sbjct: 3   QIFVKTLTGKTITLDVKSEDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLQDYNI 62

Query: 347 QKHSTLHMVLAPSSRIIELPLIFI----DPSISLSISISEVKEMAKVKFQ------AAVK 396
           QK STLH+VL    R+     IF+      +I+L +   +  +M K K Q         +
Sbjct: 63  QKESTLHLVL----RLRGGMQIFVKNLSGKTITLDVEPDQTIDMIKSKIQDKEGIPPDQQ 118

Query: 397 ELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
            L+     L+D RTL DY +     + LV 
Sbjct: 119 RLIFAGKQLEDGRTLGDYNIQKESTIHLVL 148



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/147 (34%), Positives = 83/147 (56%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           +++FVK  T +T T+ +     T+  +K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 2   IQIFVKTLTGKTITL-DVKSEDTIDAVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLQD 59

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  +G+ + L+V+    I  +K+ +    G+      
Sbjct: 60  YNIQKESTLHLVLRLRGGMQIFVKNLSGKTITLDVEPDQTIDMIKSKIQDKEGIPPDQQR 119

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL  Y+++ E  + +
Sbjct: 120 LIFAGKQLEDGRTLGDYNIQKESTIHL 146



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 3/139 (2%)

Query: 139 ILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFY 198
           ++ IFVK  TG+ + L+VK    I  VKA +    G+      +I+ GK+LED +TL  Y
Sbjct: 1   MIQIFVKTLTGKTITLDVKSEDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLQDY 60

Query: 199 DMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDL 255
           +++ E  L +       +QIFV+    + + L+VE    +  +K  + +   +    Q L
Sbjct: 61  NIQKESTLHLVLRLRGGMQIFVKNLSGKTITLDVEPDQTIDMIKSKIQDKEGIPPDQQRL 120

Query: 256 FYAGTKLEACKTLASYGIK 274
            +AG +LE  +TL  Y I+
Sbjct: 121 IFAGKQLEDGRTLGDYNIQ 139


>gi|290997019|ref|XP_002681079.1| polyubiquitin [Naegleria gruberi]
 gi|284094702|gb|EFC48335.1| polyubiquitin [Naegleria gruberi]
          Length = 153

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 90/147 (61%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +Q+FV+T   + + LEVE    + +VK  + +   +    Q L YAG +LE  +T+  Y 
Sbjct: 1   MQLFVKTLTGKTITLEVESNDSIENVKSKIQDKEGIPPEQQRLIYAGKQLEDGRTINDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+ +  L +   L    Q+FVKT  GKTIT++++  +TV+++K K+FDK   P   Q ++
Sbjct: 61  IQKDSTLHLVLRLRGGMQLFVKTLTGKTITIEMESNDTVENMKQKIFDKEGIPSDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           +AGK+L +   ++ YN+QK ST+H+VL
Sbjct: 121 YAGKQLEDGRTISDYNLQKDSTVHLVL 147



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/135 (42%), Positives = 85/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGRLV-DYGIRNNSTLHFLHQNL 59
           ++V+ ++ I+N+K+ I  KEGI  +   L +AG +LE GR + DY I+ +STLH + +  
Sbjct: 15  LEVESNDSIENVKSKIQDKEGIPPEQQRLIYAGKQLEDGRTINDYNIQKDSTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M+LFVK  T +T T +E     TV+N+K  I  KEGI SDQ  L+Y GK L ED  T+
Sbjct: 75  GGMQLFVKTLTGKTIT-IEMESNDTVENMKQKIFDKEGIPSDQQRLIYAGKQL-EDGRTI 132

Query: 120 TSMNIKSESIIHLVF 134
           +  N++ +S +HLV 
Sbjct: 133 SDYNLQKDSTVHLVL 147



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 89/147 (60%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M+LFVK  T +T T+ E     +++N+K+ IQ KEGI  +Q  L+Y GK L ED  T+  
Sbjct: 1   MQLFVKTLTGKTITL-EVESNDSIENVKSKIQDKEGIPPEQQRLIYAGKQL-EDGRTIND 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ +S +HLV   +  + +FVK  TG+ + +E++ +  + ++K  +    G+ +    
Sbjct: 59  YNIQKDSTLHLVLRLRGGMQLFVKTLTGKTITIEMESNDTVENMKQKIFDKEGIPSDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +IY GK+LED +T++ Y+++ +  + +
Sbjct: 119 LIYAGKQLEDGRTISDYNLQKDSTVHL 145



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 78/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            Q+FVKT  GKTITL+V+  +++++VK K+ DK   P   Q +++AGK+L +   +  YN
Sbjct: 1   MQLFVKTLTGKTITLEVESNDSIENVKSKIQDKEGIPPEQQRLIYAGKQLEDGRTINDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKF------QAAVKELL 399
           IQK STLH+VL     +          +I++ +  ++  E  K K        +  + L+
Sbjct: 61  IQKDSTLHLVLRLRGGMQLFVKTLTGKTITIEMESNDTVENMKQKIFDKEGIPSDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RT++DY +     V LV 
Sbjct: 121 YAGKQLEDGRTISDYNLQKDSTVHLVL 147


>gi|281203713|gb|EFA77909.1| ubiquitin/ribosomal protein S27a fusion protein [Polysphondylium
           pallidum PN500]
          Length = 167

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 58/150 (38%), Positives = 93/150 (62%), Gaps = 2/150 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+KT IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 11  MQIFVKTLTGKTITL-EVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 68

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IF+K+ TG+I+ L+V+ S +I +VK+ +    G+      
Sbjct: 69  YNIQKESTLHLVLRLRGGMEIFIKSLTGKIITLKVEDSDSIENVKSKIQEKEGIPPDQQR 128

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEMFPS 211
           +I+ G+ L+D +TL+ Y+++ E  L  F S
Sbjct: 129 LIFVGRILDDGRTLSDYNIQKESTLIWFVS 158



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 81/143 (56%), Gaps = 3/143 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 11  MQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 70

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    +IF+K+  GK ITL V+  +++++VK K+ +K   P   Q ++
Sbjct: 71  IQKESTLHLVLRLRGGMEIFIKSLTGKIITLKVEDSDSIENVKSKIQEKEGIPPDQQRLI 130

Query: 330 FAGKRLFENHVLARYNIQKHSTL 352
           F G+ L +   L+ YNIQK STL
Sbjct: 131 FVGRILDDGRTLSDYNIQKESTL 153



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/131 (38%), Positives = 81/131 (61%), Gaps = 3/131 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 25  LEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 84

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++F+K  T +  T ++     +++N+K+ IQ KEGI  DQ  L++ G++L +D  T+
Sbjct: 85  GGMEIFIKSLTGKIIT-LKVEDSDSIENVKSKIQEKEGIPPDQQRLIFVGRIL-DDGRTL 142

Query: 120 TSMNIKSESII 130
           +  NI+ ES +
Sbjct: 143 SDYNIQKESTL 153



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 57/141 (40%), Positives = 78/141 (55%), Gaps = 14/141 (9%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 11  MQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 70

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPS----ISLSISISEVKEMAKVKFQAA------V 395
           IQK STLH+VL    R+     IFI       I+L +  S+  E  K K Q         
Sbjct: 71  IQKESTLHLVL----RLRGGMEIFIKSLTGKIITLKVEDSDSIENVKSKIQEKEGIPPDQ 126

Query: 396 KELLVDQVALQDDRTLADYGM 416
           + L+     L D RTL+DY +
Sbjct: 127 QRLIFVGRILDDGRTLSDYNI 147



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 76/144 (52%), Gaps = 3/144 (2%)

Query: 139 ILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFY 198
           I+ IFVK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+LED +TL+ Y
Sbjct: 10  IMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 69

Query: 199 DMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDL 255
           +++ E  L +       ++IF+++   +I+ L+VE    + +VK  +     +    Q L
Sbjct: 70  NIQKESTLHLVLRLRGGMEIFIKSLTGKIITLKVEDSDSIENVKSKIQEKEGIPPDQQRL 129

Query: 256 FYAGTKLEACKTLASYGIKNNYVL 279
            + G  L+  +TL+ Y I+    L
Sbjct: 130 IFVGRILDDGRTLSDYNIQKESTL 153


>gi|157503117|gb|ABV58641.1| ubiquitin [Catharanthus roseus]
          Length = 137

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/137 (45%), Positives = 79/137 (57%), Gaps = 3/137 (2%)

Query: 11  NLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIP 69
           N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +    M++FVK  
Sbjct: 2   NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 61

Query: 70  TNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESI 129
           T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI  ES 
Sbjct: 62  TGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIXKEST 119

Query: 130 IHLVFCPKEILSIFVKA 146
           +HLV   +  + IFVK 
Sbjct: 120 LHLVLRLRGGMQIFVKT 136



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 56/136 (41%), Positives = 79/136 (58%), Gaps = 4/136 (2%)

Query: 87  NIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKA 146
           N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +  + IFVK 
Sbjct: 2   NVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKT 60

Query: 147 ATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLL 206
            TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y++  E  L
Sbjct: 61  LTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIXKESTL 120

Query: 207 EM---FPSSIQIFVRT 219
            +       +QIFV+T
Sbjct: 121 HLVLRLRGGMQIFVKT 136



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 51/108 (47%), Positives = 67/108 (62%), Gaps = 3/108 (2%)

Query: 252 NQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTV 308
            Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+
Sbjct: 17  QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 76

Query: 309 QDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
            +VK K+ DK   P   Q ++FAGK+L +   LA YNI K STLH+VL
Sbjct: 77  DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIXKESTLHLVL 124



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 70/135 (51%), Gaps = 6/135 (4%)

Query: 164 DVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTP 220
           +VKA +    G+      +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T 
Sbjct: 2   NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 61

Query: 221 IEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLD 280
             + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y I     L 
Sbjct: 62  TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIXKESTLH 121

Query: 281 V---LPSPFQIFVKT 292
           +   L    QIFVKT
Sbjct: 122 LVLRLRGGMQIFVKT 136



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 56/111 (50%), Gaps = 6/111 (5%)

Query: 310 DVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIF 369
           +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +       
Sbjct: 2   NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 61

Query: 370 IDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADY 414
              +I+L +  S+  +  K K Q         + L+     L+D RTLADY
Sbjct: 62  TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 112



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 42/68 (61%), Gaps = 1/68 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I   STLH + +  
Sbjct: 68  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIXKESTLHLVLRLR 127

Query: 60  SEMKLFVK 67
             M++FVK
Sbjct: 128 GGMQIFVK 135


>gi|290980934|ref|XP_002673186.1| polyubiquitin [Naegleria gruberi]
 gi|284086768|gb|EFC40442.1| polyubiquitin [Naegleria gruberi]
          Length = 152

 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 89/147 (60%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +Q+FV+T     + LEVE    + +VK  V +   +S   Q L +AG +LE  +T+  Y 
Sbjct: 1   MQLFVKTLTGITITLEVESNDSIENVKRKVQDKEGISPDQQRLIFAGKQLEDGRTINDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+ +  L +   L    Q+FVKT  GKTIT++++  +TV+++K K+FDK   P   Q ++
Sbjct: 61  IQKDSTLHLVLRLRGGMQLFVKTLTGKTITIEMESNDTVENMKQKIFDKEGIPSDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           +AGK+L +   +  YN+QK ST+H+VL
Sbjct: 121 YAGKQLEDGRTIGDYNLQKDSTVHLVL 147



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 59/135 (43%), Positives = 84/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGRLV-DYGIRNNSTLHFLHQNL 59
           ++V+ ++ I+N+K  +  KEGIS D   L FAG +LE GR + DY I+ +STLH + +  
Sbjct: 15  LEVESNDSIENVKRKVQDKEGISPDQQRLIFAGKQLEDGRTINDYNIQKDSTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M+LFVK  T +T T +E     TV+N+K  I  KEGI SDQ  L+Y GK L ED  T+
Sbjct: 75  GGMQLFVKTLTGKTIT-IEMESNDTVENMKQKIFDKEGIPSDQQRLIYAGKQL-EDGRTI 132

Query: 120 TSMNIKSESIIHLVF 134
              N++ +S +HLV 
Sbjct: 133 GDYNLQKDSTVHLVL 147



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 86/147 (58%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M+LFVK  T  T T+ E     +++N+K  +Q KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQLFVKTLTGITITL-EVESNDSIENVKRKVQDKEGISPDQQRLIFAGKQL-EDGRTIND 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ +S +HLV   +  + +FVK  TG+ + +E++ +  + ++K  +    G+ +    
Sbjct: 59  YNIQKDSTLHLVLRLRGGMQLFVKTLTGKTITIEMESNDTVENMKQKIFDKEGIPSDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +IY GK+LED +T+  Y+++ +  + +
Sbjct: 119 LIYAGKQLEDGRTIGDYNLQKDSTVHL 145



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 75/147 (51%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            Q+FVKT  G TITL+V+  +++++VK K+ DK       Q ++FAGK+L +   +  YN
Sbjct: 1   MQLFVKTLTGITITLEVESNDSIENVKRKVQDKEGISPDQQRLIFAGKQLEDGRTINDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKF------QAAVKELL 399
           IQK STLH+VL     +          +I++ +  ++  E  K K        +  + L+
Sbjct: 61  IQKDSTLHLVLRLRGGMQLFVKTLTGKTITIEMESNDTVENMKQKIFDKEGIPSDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RT+ DY +     V LV 
Sbjct: 121 YAGKQLEDGRTIGDYNLQKDSTVHLVL 147


>gi|290984552|ref|XP_002674991.1| polyubiquitin [Naegleria gruberi]
 gi|284088584|gb|EFC42247.1| polyubiquitin [Naegleria gruberi]
          Length = 153

 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 88/147 (59%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +Q+FV+T   + + LEVE    + +VK  V +   +    Q L YAG +LE  +T   Y 
Sbjct: 1   MQLFVKTLTGKTITLEVESNDSIENVKRKVQDKEGVPPEQQRLIYAGKQLEDGRTFNDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+ +  L +   L    Q+FVKT  GKTIT++ +  +T++++K K+FDK   P   Q ++
Sbjct: 61  IQKDSTLHLVLRLRGGMQLFVKTLTGKTITIETESNDTIENMKQKIFDKEGIPSDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           +AGK+L +   ++ YN+QK ST+H+VL
Sbjct: 121 YAGKQLEDGRTISDYNLQKDSTVHLVL 147



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 54/135 (40%), Positives = 83/135 (61%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ ++ I+N+K  +  KEG+  +   L +AG +LE GR   DY I+ +STLH + +  
Sbjct: 15  LEVESNDSIENVKRKVQDKEGVPPEQQRLIYAGKQLEDGRTFNDYNIQKDSTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M+LFVK  T +T T +E     T++N+K  I  KEGI SDQ  L+Y GK L ED  T+
Sbjct: 75  GGMQLFVKTLTGKTIT-IETESNDTIENMKQKIFDKEGIPSDQQRLIYAGKQL-EDGRTI 132

Query: 120 TSMNIKSESIIHLVF 134
           +  N++ +S +HLV 
Sbjct: 133 SDYNLQKDSTVHLVL 147



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 86/147 (58%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M+LFVK  T +T T+ E     +++N+K  +Q KEG+  +Q  L+Y GK L ED  T   
Sbjct: 1   MQLFVKTLTGKTITL-EVESNDSIENVKRKVQDKEGVPPEQQRLIYAGKQL-EDGRTFND 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ +S +HLV   +  + +FVK  TG+ + +E + +  I ++K  +    G+ +    
Sbjct: 59  YNIQKDSTLHLVLRLRGGMQLFVKTLTGKTITIETESNDTIENMKQKIFDKEGIPSDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +IY GK+LED +T++ Y+++ +  + +
Sbjct: 119 LIYAGKQLEDGRTISDYNLQKDSTVHL 145



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 76/147 (51%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            Q+FVKT  GKTITL+V+  +++++VK K+ DK   P   Q +++AGK+L +      YN
Sbjct: 1   MQLFVKTLTGKTITLEVESNDSIENVKRKVQDKEGVPPEQQRLIYAGKQLEDGRTFNDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKF------QAAVKELL 399
           IQK STLH+VL     +          +I++    ++  E  K K        +  + L+
Sbjct: 61  IQKDSTLHLVLRLRGGMQLFVKTLTGKTITIETESNDTIENMKQKIFDKEGIPSDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RT++DY +     V LV 
Sbjct: 121 YAGKQLEDGRTISDYNLQKDSTVHLVL 147


>gi|2641213|gb|AAB86858.1| polyubiquitin, partial [Schizophyllum commune]
          Length = 139

 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 57/140 (40%), Positives = 85/140 (60%), Gaps = 2/140 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMK 201
           +I+ GK+LED +TL+ Y+++
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQ 138



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/139 (39%), Positives = 81/139 (58%), Gaps = 3/139 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQK 348
           FAGK+L +   L+ YNIQK
Sbjct: 121 FAGKQLEDGRTLSDYNIQK 139



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 56/126 (44%), Positives = 76/126 (60%), Gaps = 3/126 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIK 125
           +  NI+
Sbjct: 133 SDYNIQ 138



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 52/137 (37%), Positives = 75/137 (54%), Gaps = 6/137 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  +  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGM 416
                L+D RTL+DY +
Sbjct: 121 FAGKQLEDGRTLSDYNI 137



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 77/138 (55%), Gaps = 3/138 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIK 274
           +AG +LE  +TL+ Y I+
Sbjct: 121 FAGKQLEDGRTLSDYNIQ 138


>gi|145530712|ref|XP_001451128.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124418772|emb|CAK83731.1| unnamed protein product [Paramecium tetraurelia]
          Length = 169

 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 62/172 (36%), Positives = 97/172 (56%), Gaps = 11/172 (6%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +  P  T+  +K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-DVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I   +       G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDATRK------GIPPDQQR 112

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVE 230
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE
Sbjct: 113 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVE 164



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 63/159 (39%), Positives = 91/159 (57%), Gaps = 9/159 (5%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I  +KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ +  P  T+         ++GI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-DVEPSDTIDA------TRKGIPPDQQRLIFAGKQL-EDGRTL 126

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKH 158
           +  NI+ ES +HLV   +  + IFVK  TG+ + L+V+H
Sbjct: 127 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEH 165



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 83/147 (56%), Gaps = 9/147 (6%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + L+VE    +  VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITLDV+P +T+   +  +      P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDATRKGI------PPDQQRLI 114

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 115 FAGKQLEDGRTLSDYNIQKESTLHLVL 141



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/170 (35%), Positives = 90/170 (52%), Gaps = 12/170 (7%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + L+V+ S  I  VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + L+VE          I A    +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVE------PSDTIDATRKGIPPDQQRLI 114

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQ 303
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITLDV+
Sbjct: 115 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVE 164



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/141 (37%), Positives = 76/141 (53%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITLDV+P +T+  VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAAVKELLVDQVAL 405
           IQK STLH+VL     +          +I+L +  S+  +  +       + L+     L
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDATRKGIPPDQQRLIFAGKQL 120

Query: 406 QDDRTLADYGMDLSEKVVLVF 426
           +D RTL+DY +     + LV 
Sbjct: 121 EDGRTLSDYNIQKESTLHLVL 141


>gi|290997001|ref|XP_002681070.1| polyubiquitin [Naegleria gruberi]
 gi|284094693|gb|EFC48326.1| polyubiquitin [Naegleria gruberi]
          Length = 153

 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 89/147 (60%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +Q+FV+T   + + LEVE    + +VK  V +   +    Q L YAG +LE  +T+  Y 
Sbjct: 1   MQLFVKTLTGKTITLEVESNDSIENVKRKVQDKEGIPPEQQRLIYAGKQLEDGRTINDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+ +  L +   L    Q+FVKT  G TIT++++  +TV+++K K+FDK   P   Q ++
Sbjct: 61  IQKDSTLHLVLRLRGGMQLFVKTLTGNTITIEMESNDTVENMKQKIFDKEGIPSDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           +AGK+L +   ++ YN+QK ST+H+VL
Sbjct: 121 YAGKQLEDGRTISDYNLQKDSTVHLVL 147



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/135 (41%), Positives = 83/135 (61%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGRLV-DYGIRNNSTLHFLHQNL 59
           ++V+ ++ I+N+K  +  KEGI  +   L +AG +LE GR + DY I+ +STLH + +  
Sbjct: 15  LEVESNDSIENVKRKVQDKEGIPPEQQRLIYAGKQLEDGRTINDYNIQKDSTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M+LFVK  T  T T +E     TV+N+K  I  KEGI SDQ  L+Y GK L ED  T+
Sbjct: 75  GGMQLFVKTLTGNTIT-IEMESNDTVENMKQKIFDKEGIPSDQQRLIYAGKQL-EDGRTI 132

Query: 120 TSMNIKSESIIHLVF 134
           +  N++ +S +HLV 
Sbjct: 133 SDYNLQKDSTVHLVL 147



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 87/147 (59%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M+LFVK  T +T T+ E     +++N+K  +Q KEGI  +Q  L+Y GK L ED  T+  
Sbjct: 1   MQLFVKTLTGKTITL-EVESNDSIENVKRKVQDKEGIPPEQQRLIYAGKQL-EDGRTIND 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ +S +HLV   +  + +FVK  TG  + +E++ +  + ++K  +    G+ +    
Sbjct: 59  YNIQKDSTLHLVLRLRGGMQLFVKTLTGNTITIEMESNDTVENMKQKIFDKEGIPSDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +IY GK+LED +T++ Y+++ +  + +
Sbjct: 119 LIYAGKQLEDGRTISDYNLQKDSTVHL 145



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 78/147 (53%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            Q+FVKT  GKTITL+V+  +++++VK K+ DK   P   Q +++AGK+L +   +  YN
Sbjct: 1   MQLFVKTLTGKTITLEVESNDSIENVKRKVQDKEGIPPEQQRLIYAGKQLEDGRTINDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKF------QAAVKELL 399
           IQK STLH+VL     +          +I++ +  ++  E  K K        +  + L+
Sbjct: 61  IQKDSTLHLVLRLRGGMQLFVKTLTGNTITIEMESNDTVENMKQKIFDKEGIPSDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RT++DY +     V LV 
Sbjct: 121 YAGKQLEDGRTISDYNLQKDSTVHLVL 147


>gi|1805696|emb|CAA71664.1| polyubiquitin [Ceratitis capitata]
          Length = 134

 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 55/135 (40%), Positives = 82/135 (60%), Gaps = 2/135 (1%)

Query: 70  TNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESI 129
           T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES 
Sbjct: 2   TGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKEST 59

Query: 130 IHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKL 189
           +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+L
Sbjct: 60  LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 119

Query: 190 EDSKTLAFYDMKDEC 204
           ED +TL+ Y+++ E 
Sbjct: 120 EDGRTLSDYNIQKES 134



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/129 (45%), Positives = 81/129 (62%), Gaps = 3/129 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 8   LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 67

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 68  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 125

Query: 120 TSMNIKSES 128
           +  NI+ ES
Sbjct: 126 SDYNIQKES 134



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 52/129 (40%), Positives = 76/129 (58%), Gaps = 3/129 (2%)

Query: 225 VRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV--- 281
           + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   
Sbjct: 6   ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 65

Query: 282 LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVL 341
           L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L
Sbjct: 66  LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 125

Query: 342 ARYNIQKHS 350
           + YNIQK S
Sbjct: 126 SDYNIQKES 134



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 71/128 (55%), Gaps = 6/128 (4%)

Query: 295 GKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHM 354
           GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+
Sbjct: 3   GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 62

Query: 355 VLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDD 408
           VL     +          +I+L +  S+  E  K K Q         + L+     L+D 
Sbjct: 63  VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 122

Query: 409 RTLADYGM 416
           RTL+DY +
Sbjct: 123 RTLSDYNI 130



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 3/130 (2%)

Query: 148 TGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLE 207
           TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+++ E  L 
Sbjct: 2   TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 61

Query: 208 M---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEA 264
           +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE 
Sbjct: 62  LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 121

Query: 265 CKTLASYGIK 274
            +TL+ Y I+
Sbjct: 122 GRTLSDYNIQ 131


>gi|290986589|ref|XP_002676006.1| polyubiquitin [Naegleria gruberi]
 gi|284089606|gb|EFC43262.1| polyubiquitin [Naegleria gruberi]
          Length = 153

 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 89/147 (60%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +Q+FV+T   + + LEVE    + +VK  +     +S   Q L + G +LE  +T+  Y 
Sbjct: 1   MQLFVKTLTGKTITLEVESNDSIENVKSKIQEKEGISPDQQRLIFGGKQLEDGRTINDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+ +  L +   L    Q+FVKT  GKTIT++++  +T++++K K+FDK   P   Q ++
Sbjct: 61  IQKDSTLHLVLRLRGGMQLFVKTLTGKTITIEMEANDTIENMKQKIFDKEGIPSDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           +AGK+L +   ++ YN+QK ST+H+VL
Sbjct: 121 YAGKQLEDGRTISDYNLQKDSTVHLVL 147



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/135 (42%), Positives = 85/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGRLV-DYGIRNNSTLHFLHQNL 59
           ++V+ ++ I+N+K+ I  KEGIS D   L F G +LE GR + DY I+ +STLH + +  
Sbjct: 15  LEVESNDSIENVKSKIQEKEGISPDQQRLIFGGKQLEDGRTINDYNIQKDSTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M+LFVK  T +T T +E     T++N+K  I  KEGI SDQ  L+Y GK L ED  T+
Sbjct: 75  GGMQLFVKTLTGKTIT-IEMEANDTIENMKQKIFDKEGIPSDQQRLIYAGKQL-EDGRTI 132

Query: 120 TSMNIKSESIIHLVF 134
           +  N++ +S +HLV 
Sbjct: 133 SDYNLQKDSTVHLVL 147



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 50/147 (34%), Positives = 89/147 (60%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M+LFVK  T +T T+ E     +++N+K+ IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQLFVKTLTGKTITL-EVESNDSIENVKSKIQEKEGISPDQQRLIFGGKQL-EDGRTIND 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ +S +HLV   +  + +FVK  TG+ + +E++ +  I ++K  +    G+ +    
Sbjct: 59  YNIQKDSTLHLVLRLRGGMQLFVKTLTGKTITIEMEANDTIENMKQKIFDKEGIPSDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +IY GK+LED +T++ Y+++ +  + +
Sbjct: 119 LIYAGKQLEDGRTISDYNLQKDSTVHL 145



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 76/147 (51%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            Q+FVKT  GKTITL+V+  +++++VK K+ +K       Q ++F GK+L +   +  YN
Sbjct: 1   MQLFVKTLTGKTITLEVESNDSIENVKSKIQEKEGISPDQQRLIFGGKQLEDGRTINDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKF------QAAVKELL 399
           IQK STLH+VL     +          +I++ +  ++  E  K K        +  + L+
Sbjct: 61  IQKDSTLHLVLRLRGGMQLFVKTLTGKTITIEMEANDTIENMKQKIFDKEGIPSDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RT++DY +     V LV 
Sbjct: 121 YAGKQLEDGRTISDYNLQKDSTVHLVL 147


>gi|452113248|gb|AGG08881.1| ubiquitin, partial [Rana clamitans]
          Length = 126

 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 77/126 (61%), Gaps = 1/126 (0%)

Query: 81  PYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEIL 140
           P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV   +  +
Sbjct: 2   PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGM 60

Query: 141 SIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDM 200
            IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y++
Sbjct: 61  QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 120

Query: 201 KDECLL 206
           + E  L
Sbjct: 121 QKESTL 126



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/126 (45%), Positives = 78/126 (61%), Gaps = 3/126 (2%)

Query: 6   SEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKL 64
           S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +    M++
Sbjct: 3   SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 62

Query: 65  FVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNI 124
           FVK  T +T T+ E  P  T++N+K  IQ KEGI  +Q  L++ GK L ED  T++  NI
Sbjct: 63  FVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQL-EDGRTLSDYNI 120

Query: 125 KSESII 130
           + ES +
Sbjct: 121 QKESTL 126



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 50/122 (40%), Positives = 74/122 (60%), Gaps = 3/122 (2%)

Query: 234 VVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFV 290
            + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFV
Sbjct: 5   TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 64

Query: 291 KTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHS 350
           KT  GKTITL+V+P +T+++VK K+ DK   P + Q ++FAGK+L +   L+ YNIQK S
Sbjct: 65  KTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKES 124

Query: 351 TL 352
           TL
Sbjct: 125 TL 126



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 63/120 (52%), Gaps = 6/120 (5%)

Query: 303 QPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRI 362
           +P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +
Sbjct: 1   EPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 60

Query: 363 IELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGM 416
                     +I+L +  S+  E  K K Q         + L+     L+D RTL+DY +
Sbjct: 61  QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 120



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 65/124 (52%), Gaps = 3/124 (2%)

Query: 159 SFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQI 215
           S  I +VKA +    G+      +I+ GK+LED +TL+ Y+++ E  L +       +QI
Sbjct: 3   SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 62

Query: 216 FVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKN 275
           FV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y I+ 
Sbjct: 63  FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 122

Query: 276 NYVL 279
              L
Sbjct: 123 ESTL 126



 Score = 46.2 bits (108), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 26/53 (49%), Positives = 35/53 (66%), Gaps = 1/53 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTL 52
           ++V+ S+ I+N+KA I  KEGI  +   L FAG +LE GR L DY I+  STL
Sbjct: 74  LEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 126


>gi|350426996|ref|XP_003494613.1| PREDICTED: polyubiquitin-A-like, partial [Bombus impatiens]
          Length = 136

 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 60/137 (43%), Positives = 84/137 (61%), Gaps = 3/137 (2%)

Query: 32  AGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKT 90
           AG +LE GR L DY I+  STLH + +    M++FVK  T +T T+ E     T++N+K 
Sbjct: 1   AGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVEASDTIENVKA 59

Query: 91  MIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGE 150
            IQ KEGI  DQ  +++ GK L ED  T++  NI+ ES +HLV   +  + IFVK  TG+
Sbjct: 60  KIQDKEGIPPDQQRVIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 118

Query: 151 IVNLEVKHSFAIRDVKA 167
            + LEV+ S  I +VKA
Sbjct: 119 TITLEVEASDTIENVKA 135



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/136 (39%), Positives = 77/136 (56%), Gaps = 3/136 (2%)

Query: 258 AGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVK 314
           AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK K
Sbjct: 1   AGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAK 60

Query: 315 LFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSI 374
           + DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +I
Sbjct: 61  IQDKEGIPPDQQRVIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 120

Query: 375 SLSISISEVKEMAKVK 390
           +L +  S+  E  K K
Sbjct: 121 TLEVEASDTIENVKAK 136



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/134 (37%), Positives = 77/134 (57%), Gaps = 4/134 (2%)

Query: 109 GKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAI 168
           GK L ED  T++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA 
Sbjct: 2   GKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAK 60

Query: 169 VGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIV 225
           +    G+      +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + +
Sbjct: 61  IQDKEGIPPDQQRVIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 120

Query: 226 RLEVEVLIVVRDVK 239
            LEVE    + +VK
Sbjct: 121 TLEVEASDTIENVK 134



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 78/135 (57%), Gaps = 6/135 (4%)

Query: 186 GKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIV 242
           GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  +
Sbjct: 2   GKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 61

Query: 243 ANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTIT 299
            +   +    Q + +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTIT
Sbjct: 62  QDKEGIPPDQQRVIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 121

Query: 300 LDVQPYNTVQDVKVK 314
           L+V+  +T+++VK K
Sbjct: 122 LEVEASDTIENVKAK 136



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 56/90 (62%), Gaps = 2/90 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   + FAG +LE GR L DY I+  STLH + +  
Sbjct: 46  LEVEASDTIENVKAKIQDKEGIPPDQQRVIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 105

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIK 89
             M++FVK  T +T T +E     T++N+K
Sbjct: 106 GGMQIFVKTLTGKTIT-LEVEASDTIENVK 134



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 6/102 (5%)

Query: 331 AGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVK 390
           AGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K K
Sbjct: 1   AGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAK 60

Query: 391 FQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
            Q         + ++     L+D RTL+DY +     + LV 
Sbjct: 61  IQDKEGIPPDQQRVIFAGKQLEDGRTLSDYNIQKESTLHLVL 102


>gi|403289148|ref|XP_003935728.1| PREDICTED: polyubiquitin-B-like [Saimiri boliviensis boliviensis]
          Length = 165

 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 59/148 (39%), Positives = 86/148 (58%), Gaps = 13/148 (8%)

Query: 215 IFVRTPIEEIVR---LEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASY 271
           + +  P +++ R   LEV+    V+D + I  +        Q L +AG +LE   TL+ Y
Sbjct: 19  MLITKPRQDLQRRQSLEVQFCQRVQDKEGIPPD-------QQRLIFAGKQLEDGHTLSDY 71

Query: 272 GIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSI 328
            I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q +
Sbjct: 72  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 131

Query: 329 VFAGKRLFENHVLARYNIQKHSTLHMVL 356
           +FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 132 IFAGKQLEDGRTLSXYNIQKESTLHLVL 159



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/120 (45%), Positives = 72/120 (60%), Gaps = 3/120 (2%)

Query: 16  IHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTA 74
           +  KEGI  D   L FAG +LE G  L DY I+  STLH + +    M++FVK  T +T 
Sbjct: 42  VQDKEGIPPDQQRLIFAGKQLEDGHTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 101

Query: 75  TVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVF 134
           T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV 
Sbjct: 102 TL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSXYNIQKESTLHLVL 159



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/117 (40%), Positives = 71/117 (60%), Gaps = 1/117 (0%)

Query: 92  IQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEI 151
           +Q KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV   +  + IFVK  TG+ 
Sbjct: 42  VQDKEGIPPDQQRLIFAGKQL-EDGHTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 100

Query: 152 VNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
           + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 101 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYNIQKESTLHL 157



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 3/109 (2%)

Query: 174 GVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVE 230
           G+      +I+ GK+LED  TL+ Y+++ E  L +       +QIFV+T   + + LEVE
Sbjct: 47  GIPPDQQRLIFAGKQLEDGHTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 106

Query: 231 VLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
               + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 107 PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYNIQKESTL 155



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 57/119 (47%), Gaps = 6/119 (5%)

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           ++ DK   P   Q ++FAGK+L + H L+ YNIQK STLH+VL     +          +
Sbjct: 41  RVQDKEGIPPDQQRLIFAGKQLEDGHTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 100

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+ Y +     + LV 
Sbjct: 101 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYNIQKESTLHLVL 159



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L  Y I+  STLH +
Sbjct: 103 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYNIQKESTLHLV 158


>gi|83944648|gb|ABC48928.1| ubiquitin [Eisenia fetida]
          Length = 121

 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/123 (47%), Positives = 76/123 (61%), Gaps = 3/123 (2%)

Query: 12  LKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPT 70
           LKA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +    M++FVK  T
Sbjct: 1   LKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLT 60

Query: 71  NQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESII 130
            +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +
Sbjct: 61  GKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTL 118

Query: 131 HLV 133
           HLV
Sbjct: 119 HLV 121



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 50/107 (46%), Positives = 69/107 (64%), Gaps = 3/107 (2%)

Query: 252 NQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTV 308
            Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+
Sbjct: 15  QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTI 74

Query: 309 QDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           ++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 75  ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 121



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 73/121 (60%), Gaps = 1/121 (0%)

Query: 88  IKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAA 147
           +K  IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV   +  + IFVK  
Sbjct: 1   LKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 59

Query: 148 TGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLE 207
           TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+++ E  L 
Sbjct: 60  TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 119

Query: 208 M 208
           +
Sbjct: 120 L 120



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 3/118 (2%)

Query: 165 VKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPI 221
           +KA +    G+      +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T  
Sbjct: 1   LKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLT 60

Query: 222 EEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
            + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 61  GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 118



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 56/112 (50%), Gaps = 6/112 (5%)

Query: 311 VKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFI 370
           +K K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +        
Sbjct: 1   LKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLT 60

Query: 371 DPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGM 416
             +I+L +  S+  E  K K Q         + L+     L+D RTL+DY +
Sbjct: 61  GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 112



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 66  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 121


>gi|340709503|ref|XP_003393346.1| PREDICTED: polyubiquitin-B-like isoform 1 [Bombus terrestris]
 gi|340709505|ref|XP_003393347.1| PREDICTED: polyubiquitin-B-like isoform 2 [Bombus terrestris]
          Length = 157

 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 88/147 (59%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IK---NNYVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    ++++  L    QI VKT  GK ITL+V   +T+++VK K+ +K   P   Q ++
Sbjct: 61  IQKESTSHLVLRLRGGMQISVKTLTGKAITLEVDVPDTIENVKAKIHEKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 85/147 (57%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES  HLV   +  + I VK  TG+ + LEV     I +VKA +    G+      
Sbjct: 59  YNIQKESTSHLVLRLRGGMQISVKTLTGKAITLEVDVPDTIENVKAKIHEKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/135 (42%), Positives = 81/135 (60%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  ST H + +  
Sbjct: 15  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTSHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++ VK  T +  T+   +P  T++N+K  I  KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQISVKTLTGKAITLEVDVP-DTIENVKAKIHEKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 133 SDYNIQKESTLHLVL 147



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 77/147 (52%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELL 399
           IQK ST H+VL     +          +I+L + + +  E  K K           + L+
Sbjct: 61  IQKESTSHLVLRLRGGMQISVKTLTGKAITLEVDVPDTIENVKAKIHEKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147


>gi|414588568|tpg|DAA39139.1| TPA: putative ubiquitin family protein isoform 1 [Zea mays]
 gi|414588569|tpg|DAA39140.1| TPA: putative ubiquitin family protein isoform 2 [Zea mays]
          Length = 222

 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 118/226 (52%), Gaps = 16/226 (7%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFV++ +G+++ L V+    +  VK  +          + +++EG ++ED+ TLA Y+
Sbjct: 1   MQIFVRSPSGKMICLRVQPDDTLHTVKKKI-------LEKYHLVFEGVQMEDNLTLADYN 53

Query: 200 MKDECLLEMFPSSIQIFVRTPIEEI-VRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYA 258
           ++ +  L++    +QI+V+  ++ + + L+V+ L  +  +K+ +        G Q L + 
Sbjct: 54  IQHQSTLDL-QEKMQIYVKETLKGLTITLDVDSLDTIDIIKDKIEYNEGFPKGRQCLIFG 112

Query: 259 GTKLEACKTLASYGIKNNYVLDVLPSP-------FQIFVKTWGGKTITLDVQPYNTVQDV 311
             +LE   TLA Y I N   L ++  P        QIFVK   GKT T+ V   +TV  +
Sbjct: 113 DEQLEGKYTLADYNICNESTLLLVIHPCTSTSDAMQIFVKMQNGKTTTVRVDSSDTVNSI 172

Query: 312 KVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLA 357
            VK+++    P   Q I+F G+RL     LA Y IQK  TLH++L 
Sbjct: 173 TVKIYEMEGIPPLEQRIIFRGRRLEGRRTLADYGIQKEETLHLMLC 218



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 111/230 (48%), Gaps = 29/230 (12%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFVR+P  +++ L V+    +  VK+ +       L    L + G ++E   TLA Y 
Sbjct: 1   MQIFVRSPSGKMICLRVQPDDTLHTVKKKI-------LEKYHLVFEGVQMEDNLTLADYN 53

Query: 273 IKNNYVLDVLPSPFQIFVK-TWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFA 331
           I++   LD L    QI+VK T  G TITLDV   +T+  +K K+      P   Q ++F 
Sbjct: 54  IQHQSTLD-LQEKMQIYVKETLKGLTITLDVDSLDTIDIIKDKIEYNEGFPKGRQCLIFG 112

Query: 332 GKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFI---------------DPSISL 376
            ++L   + LA YNI   STL +V+ P +   +   IF+               D   S+
Sbjct: 113 DEQLEGKYTLADYNICNESTLLLVIHPCTSTSDAMQIFVKMQNGKTTTVRVDSSDTVNSI 172

Query: 377 SISISEVKEMAKVKFQAAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           ++ I E++ +  ++     + ++     L+  RTLADYG+   E + L+ 
Sbjct: 173 TVKIYEMEGIPPLE-----QRIIFRGRRLEGRRTLADYGIQKEETLHLML 217



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 84/180 (46%), Gaps = 10/180 (5%)

Query: 29  LFFAGDRLEAG-RLVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQN 87
           L F G ++E    L DY I++ STL    +    M+++VK         ++     T+  
Sbjct: 36  LVFEGVQMEDNLTLADYNIQHQSTLDLQEK----MQIYVKETLKGLTITLDVDSLDTIDI 91

Query: 88  IKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCP----KEILSIF 143
           IK  I+  EG    +  L++  + L E   T+   NI +ES + LV  P     + + IF
Sbjct: 92  IKDKIEYNEGFPKGRQCLIFGDEQL-EGKYTLADYNICNESTLLLVIHPCTSTSDAMQIF 150

Query: 144 VKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDE 203
           VK   G+   + V  S  +  +   +  + G+   +  +I+ G++LE  +TLA Y ++ E
Sbjct: 151 VKMQNGKTTTVRVDSSDTVNSITVKIYEMEGIPPLEQRIIFRGRRLEGRRTLADYGIQKE 210


>gi|29425820|gb|AAO73559.1| polyubiquitin [Anas platyrhynchos]
 gi|29425822|gb|AAO73560.1| polyubiquitin [Anas platyrhynchos]
          Length = 115

 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 51/107 (47%), Positives = 70/107 (65%), Gaps = 3/107 (2%)

Query: 253 QDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQ 309
           Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T++
Sbjct: 1   QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 60

Query: 310 DVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 61  NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 107



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 50/107 (46%), Positives = 67/107 (62%), Gaps = 3/107 (2%)

Query: 29  LFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQN 87
           L FAG +LE GR L DY I+  STLH + +    M++FVK  T +T T+ E  P  T++N
Sbjct: 3   LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVEPSDTIEN 61

Query: 88  IKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVF 134
           +K  IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV 
Sbjct: 62  VKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVL 107



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 40/104 (38%), Positives = 63/104 (60%), Gaps = 1/104 (0%)

Query: 105 LVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRD 164
           L++ GK L ED  T++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +
Sbjct: 3   LIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIEN 61

Query: 165 VKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
           VKA +    G+      +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 62  VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 105



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 3/101 (2%)

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 3   LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 62

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 63  KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 103



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 6/107 (5%)

Query: 326 QSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKE 385
           Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E
Sbjct: 1   QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 60

Query: 386 MAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
             K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 61  NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 107



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 51  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 106


>gi|33327286|gb|AAQ08999.1| polyubiquitin 2 [Phaseolus vulgaris]
          Length = 134

 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/130 (46%), Positives = 77/130 (59%), Gaps = 3/130 (2%)

Query: 6   SEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKL 64
           S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +    M++
Sbjct: 1   SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQI 60

Query: 65  FVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNI 124
           FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI
Sbjct: 61  FVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNI 118

Query: 125 KSESIIHLVF 134
           + ES +HLV 
Sbjct: 119 QKESTLHLVL 128



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 52/107 (48%), Positives = 68/107 (63%), Gaps = 3/107 (2%)

Query: 253 QDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQ 309
           Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ 
Sbjct: 22  QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 81

Query: 310 DVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 82  NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 128



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 52/125 (41%), Positives = 75/125 (60%), Gaps = 1/125 (0%)

Query: 84  TVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIF 143
           T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +  + IF
Sbjct: 3   TIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIF 61

Query: 144 VKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDE 203
           VK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+++ E
Sbjct: 62  VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 121

Query: 204 CLLEM 208
             L +
Sbjct: 122 STLHL 126



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 65/124 (52%), Gaps = 3/124 (2%)

Query: 159 SFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQI 215
           S  I +VKA +    G+      +I+ GK+LED +TLA Y+++ E  L +       +QI
Sbjct: 1   SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQI 60

Query: 216 FVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKN 275
           FV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y I+ 
Sbjct: 61  FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 120

Query: 276 NYVL 279
              L
Sbjct: 121 ESTL 124



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 6/127 (4%)

Query: 306 NTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIEL 365
           +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +   
Sbjct: 2   DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIF 61

Query: 366 PLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLS 419
                  +I+L +  S+  +  K K Q         + L+     L+D RTLADY +   
Sbjct: 62  VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 121

Query: 420 EKVVLVF 426
             + LV 
Sbjct: 122 STLHLVL 128



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 72  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 127


>gi|89114278|gb|ABD61727.1| polyubiquitin [Lupinus albus]
          Length = 132

 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/132 (44%), Positives = 79/132 (59%), Gaps = 3/132 (2%)

Query: 29  LFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQN 87
           L FAG +LE GR L DY I+  STLH + +    M++FVK  T +T T+ E     T+ N
Sbjct: 1   LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDN 59

Query: 88  IKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAA 147
           +K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +  + IFVK  
Sbjct: 60  VKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 118

Query: 148 TGEIVNLEVKHS 159
           TG+ + LEV+ S
Sbjct: 119 TGKTITLEVESS 130



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 51/105 (48%), Positives = 67/105 (63%), Gaps = 3/105 (2%)

Query: 255 LFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDV 311
           L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +V
Sbjct: 1   LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 60

Query: 312 KVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 61  KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 105



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 75/129 (58%), Gaps = 4/129 (3%)

Query: 105 LVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRD 164
           L++ GK L ED  T+   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +
Sbjct: 1   LIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDN 59

Query: 165 VKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPI 221
           VKA +    G+      +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T  
Sbjct: 60  VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLT 119

Query: 222 EEIVRLEVE 230
            + + LEVE
Sbjct: 120 GKTITLEVE 128



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 50/132 (37%), Positives = 75/132 (56%), Gaps = 6/132 (4%)

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 1   LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 60

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 61  KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 120

Query: 296 KTITLDVQPYNT 307
           KTITL+V+  +T
Sbjct: 121 KTITLEVESSDT 132



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/77 (45%), Positives = 48/77 (62%), Gaps = 1/77 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 49  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 108

Query: 60  SEMKLFVKIPTNQTATV 76
             M++FVK  T +T T+
Sbjct: 109 GGMQIFVKTLTGKTITL 125



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 6/93 (6%)

Query: 328 IVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMA 387
           ++FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +  
Sbjct: 1   LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 60

Query: 388 KVKFQAA------VKELLVDQVALQDDRTLADY 414
           K K Q         + L+     L+D RTLADY
Sbjct: 61  KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 93


>gi|123390686|ref|XP_001299928.1| polyubiquitin [Trichomonas vaginalis G3]
 gi|121880877|gb|EAX86998.1| polyubiquitin, putative [Trichomonas vaginalis G3]
          Length = 186

 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 83/143 (58%), Gaps = 3/143 (2%)

Query: 217 VRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNN 276
           V+T   + + LEVE    + DVK  + +   +    Q L +AG +LE   TL  Y I+ +
Sbjct: 38  VKTLTGKHITLEVEPTDRIEDVKTKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKD 97

Query: 277 YVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGK 333
             L +   L    QIFVKT  GK ITL+V+P + ++DVK K+ DK   P   Q ++FAGK
Sbjct: 98  STLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGK 157

Query: 334 RLFENHVLARYNIQKHSTLHMVL 356
           +L + + L  Y+IQK STLH+VL
Sbjct: 158 QLEDGNTLQDYSIQKDSTLHLVL 180



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/133 (36%), Positives = 76/133 (57%), Gaps = 1/133 (0%)

Query: 76  VVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFC 135
            +E  P   ++++KT IQ KEGI  DQ  L++ GK L ED  T+   +I+ +S +HLV  
Sbjct: 47  TLEVEPTDRIEDVKTKIQDKEGIPPDQQRLIFAGKQL-EDGNTLQDYSIQKDSTLHLVLR 105

Query: 136 PKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTL 195
            +  + IFVK  TG+ + LEV+ +  I DVKA +    G+      +I+ GK+LED  TL
Sbjct: 106 LRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTL 165

Query: 196 AFYDMKDECLLEM 208
             Y ++ +  L +
Sbjct: 166 QDYSIQKDSTLHL 178



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 53/135 (39%), Positives = 81/135 (60%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ ++ I+++K  I  KEGI  D   L FAG +LE G  L DY I+ +STLH + +  
Sbjct: 48  LEVEPTDRIEDVKTKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLR 107

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +  T +E  P   ++++K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 108 GGMQIFVKTLTGKHIT-LEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQL-EDGNTL 165

Query: 120 TSMNIKSESIIHLVF 134
              +I+ +S +HLV 
Sbjct: 166 QDYSIQKDSTLHLVL 180



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 70/139 (50%), Gaps = 3/139 (2%)

Query: 144 VKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDE 203
           VK  TG+ + LEV+ +  I DVK  +    G+      +I+ GK+LED  TL  Y ++ +
Sbjct: 38  VKTLTGKHITLEVEPTDRIEDVKTKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKD 97

Query: 204 CLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGT 260
             L +       +QIFV+T   + + LEVE    + DVK  + +   +    Q L +AG 
Sbjct: 98  STLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGK 157

Query: 261 KLEACKTLASYGIKNNYVL 279
           +LE   TL  Y I+ +  L
Sbjct: 158 QLEDGNTLQDYSIQKDSTL 176


>gi|70780322|gb|AAZ08412.1| polyubiquitin [Populus alba]
          Length = 139

 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/139 (43%), Positives = 81/139 (58%), Gaps = 3/139 (2%)

Query: 30  FFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNI 88
           F  G +LE GR L DY I+  STLH + +    M++FVK  T +T T+ E     T+ N+
Sbjct: 1   FLLGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNV 59

Query: 89  KTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAAT 148
           K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES  HLV   +  + IFVK  T
Sbjct: 60  KAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTPHLVLRLRGGMQIFVKTLT 118

Query: 149 GEIVNLEVKHSFAIRDVKA 167
           G+ + LEV+ S  I +VKA
Sbjct: 119 GKTITLEVESSDTIDNVKA 137



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 54/138 (39%), Positives = 75/138 (54%), Gaps = 3/138 (2%)

Query: 256 FYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVK 312
           F  G +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK
Sbjct: 1   FLLGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 60

Query: 313 VKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDP 372
            K+ DK   P   Q ++FAGK+L +   LA YNIQK ST H+VL     +          
Sbjct: 61  AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTPHLVLRLRGGMQIFVKTLTGK 120

Query: 373 SISLSISISEVKEMAKVK 390
           +I+L +  S+  +  K K
Sbjct: 121 TITLEVESSDTIDNVKAK 138



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/136 (37%), Positives = 79/136 (58%), Gaps = 6/136 (4%)

Query: 186 GKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIV 242
           GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  +
Sbjct: 4   GKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 63

Query: 243 ANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNN---YVLDVLPSPFQIFVKTWGGKTIT 299
            +   +    Q L +AG +LE  +TLA Y I+     +++  L    QIFVKT  GKTIT
Sbjct: 64  QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTPHLVLRLRGGMQIFVKTLTGKTIT 123

Query: 300 LDVQPYNTVQDVKVKL 315
           L+V+  +T+ +VK K+
Sbjct: 124 LEVESSDTIDNVKAKI 139



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 51/134 (38%), Positives = 76/134 (56%), Gaps = 4/134 (2%)

Query: 109 GKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAI 168
           GK L ED  T+   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA 
Sbjct: 4   GKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK 62

Query: 169 VGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDEC---LLEMFPSSIQIFVRTPIEEIV 225
           +    G+      +I+ GK+LED +TLA Y+++ E    L+      +QIFV+T   + +
Sbjct: 63  IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTPHLVLRLRGGMQIFVKTLTGKTI 122

Query: 226 RLEVEVLIVVRDVK 239
            LEVE    + +VK
Sbjct: 123 TLEVESSDTIDNVK 136



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 2/93 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  ST H + +  
Sbjct: 48  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTPHLVLRLR 107

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMI 92
             M++FVK  T +T T +E     T+ N+K  I
Sbjct: 108 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKI 139



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 43/89 (48%), Gaps = 6/89 (6%)

Query: 332 GKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKF 391
           GK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +  K K 
Sbjct: 4   GKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 63

Query: 392 QAA------VKELLVDQVALQDDRTLADY 414
           Q         + L+     L+D RTLADY
Sbjct: 64  QDKEGIPPDQQRLIFAGKQLEDGRTLADY 92


>gi|290995512|ref|XP_002680339.1| polyubiquitin [Naegleria gruberi]
 gi|284093959|gb|EFC47595.1| polyubiquitin [Naegleria gruberi]
          Length = 152

 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 59/135 (43%), Positives = 84/135 (62%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGRLV-DYGIRNNSTLHFLHQNL 59
           ++V+ ++ I+N+K   H KEGI  D   L FAG +LE GR + DY I+ +STLH + + +
Sbjct: 15  LEVESNDSIENVKRKAHDKEGILPDQQRLIFAGKQLEDGRTINDYNIQKDSTLHLVWRLI 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M+LFVK  T +T T +E     TV+N+K  I  KEGI SDQ  L+Y GK L ED  T+
Sbjct: 75  GGMQLFVKTLTGKTIT-IEMESNATVENMKQKIFDKEGIPSDQQRLIYAGKQL-EDGRTI 132

Query: 120 TSMNIKSESIIHLVF 134
              N++ +S +HLV 
Sbjct: 133 GDYNLQKDSTVHLVL 147



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/147 (36%), Positives = 86/147 (58%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +Q+FV+T     + LEVE    + +VK    +   +    Q L +AG +LE  +T+  Y 
Sbjct: 1   MQLFVKTLTGRTITLEVESNDSIENVKRKAHDKEGILPDQQRLIFAGKQLEDGRTINDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+ +  L +   L    Q+FVKT  GKTIT++++   TV+++K K+FDK   P   Q ++
Sbjct: 61  IQKDSTLHLVWRLIGGMQLFVKTLTGKTITIEMESNATVENMKQKIFDKEGIPSDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           +AGK+L +   +  YN+QK ST+H+VL
Sbjct: 121 YAGKQLEDGRTIGDYNLQKDSTVHLVL 147



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 85/147 (57%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M+LFVK  T +T T+ E     +++N+K     KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQLFVKTLTGRTITL-EVESNDSIENVKRKAHDKEGILPDQQRLIFAGKQL-EDGRTIND 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ +S +HLV+     + +FVK  TG+ + +E++ +  + ++K  +    G+ +    
Sbjct: 59  YNIQKDSTLHLVWRLIGGMQLFVKTLTGKTITIEMESNATVENMKQKIFDKEGIPSDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +IY GK+LED +T+  Y+++ +  + +
Sbjct: 119 LIYAGKQLEDGRTIGDYNLQKDSTVHL 145



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 79/151 (52%), Gaps = 14/151 (9%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            Q+FVKT  G+TITL+V+  +++++VK K  DK       Q ++FAGK+L +   +  YN
Sbjct: 1   MQLFVKTLTGRTITLEVESNDSIENVKRKAHDKEGILPDQQRLIFAGKQLEDGRTINDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISI-----SEVKEMAKVKFQ-----AAV 395
           IQK STLH+V     R+I    +F+      +I+I     + V+ M +  F      +  
Sbjct: 61  IQKDSTLHLVW----RLIGGMQLFVKTLTGKTITIEMESNATVENMKQKIFDKEGIPSDQ 116

Query: 396 KELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           + L+     L+D RT+ DY +     V LV 
Sbjct: 117 QRLIYAGKQLEDGRTIGDYNLQKDSTVHLVL 147


>gi|29169226|gb|AAO66467.1| polyubiquitin [Camelus dromedarius]
          Length = 108

 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 50/107 (46%), Positives = 69/107 (64%), Gaps = 3/107 (2%)

Query: 252 NQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTV 308
            Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+
Sbjct: 2   QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTI 61

Query: 309 QDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           ++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 62  ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 108



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 51/110 (46%), Positives = 68/110 (61%), Gaps = 3/110 (2%)

Query: 25  DICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYH 83
           D   L FAG +LE GR L DY I+  STLH + +    M++FVK  T +T T+ E  P  
Sbjct: 1   DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVEPSD 59

Query: 84  TVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLV 133
           T++N+K  IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV
Sbjct: 60  TIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLV 108



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/108 (38%), Positives = 65/108 (60%), Gaps = 1/108 (0%)

Query: 101 DQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSF 160
           DQ  L++ GK L ED  T++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S 
Sbjct: 1   DQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 59

Query: 161 AIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
            I +VKA +    G+      +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 60  TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 107



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 3/101 (2%)

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 5   LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 64

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 65  KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 105



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 6/97 (6%)

Query: 326 QSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKE 385
           Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E
Sbjct: 3   QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 62

Query: 386 MAKVKFQ------AAVKELLVDQVALQDDRTLADYGM 416
             K K Q         + L+     L+D RTL+DY +
Sbjct: 63  NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 99



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 53  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 108


>gi|380026660|ref|XP_003697063.1| PREDICTED: polyubiquitin-A-like, partial [Apis florea]
          Length = 130

 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 58/126 (46%), Positives = 77/126 (61%), Gaps = 3/126 (2%)

Query: 10  KNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKI 68
           +N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +    M++FVK 
Sbjct: 1   ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKT 60

Query: 69  PTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSES 128
            T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES
Sbjct: 61  LTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKES 118

Query: 129 IIHLVF 134
            +HLV 
Sbjct: 119 TLHLVL 124



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 50/107 (46%), Positives = 69/107 (64%), Gaps = 3/107 (2%)

Query: 253 QDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQ 309
           Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T++
Sbjct: 18  QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 77

Query: 310 DVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 78  NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 124



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 50/123 (40%), Positives = 75/123 (60%), Gaps = 1/123 (0%)

Query: 86  QNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVK 145
           +N+K  IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV   +  + IFVK
Sbjct: 1   ENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVK 59

Query: 146 AATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECL 205
             TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+++ E  
Sbjct: 60  TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 119

Query: 206 LEM 208
           L +
Sbjct: 120 LHL 122



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 63/119 (52%), Gaps = 3/119 (2%)

Query: 164 DVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTP 220
           +VKA +    G+      +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T 
Sbjct: 2   NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 61

Query: 221 IEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
             + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 62  TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 120



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 61/124 (49%), Gaps = 6/124 (4%)

Query: 309 QDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLI 368
           ++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +      
Sbjct: 1   ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKT 60

Query: 369 FIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKV 422
               +I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     +
Sbjct: 61  LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 120

Query: 423 VLVF 426
            LV 
Sbjct: 121 HLVL 124



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 68  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 123


>gi|6114876|dbj|BAA85750.1| polyubiquitin [Cucumis melo]
          Length = 127

 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 52/108 (48%), Positives = 68/108 (62%), Gaps = 3/108 (2%)

Query: 252 NQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTV 308
            Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+
Sbjct: 3   QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 62

Query: 309 QDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
            +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 63  DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 110



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/127 (44%), Positives = 74/127 (58%), Gaps = 3/127 (2%)

Query: 25  DICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYH 83
           D   L FAG +LE GR L DY I+  STLH + +    M++FVK  T +T T+ E     
Sbjct: 2   DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSD 60

Query: 84  TVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIF 143
           T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +  + IF
Sbjct: 61  TIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIF 119

Query: 144 VKAATGE 150
           VK  TG+
Sbjct: 120 VKTLTGK 126



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/122 (39%), Positives = 71/122 (58%), Gaps = 4/122 (3%)

Query: 101 DQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSF 160
           DQ  L++ GK L ED  T+   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S 
Sbjct: 2   DQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD 60

Query: 161 AIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFV 217
            I +VKA +    G+      +I+ GK+LED +TLA Y+++ E  L +       +QIFV
Sbjct: 61  TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFV 120

Query: 218 RT 219
           +T
Sbjct: 121 KT 122



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 45/122 (36%), Positives = 67/122 (54%), Gaps = 6/122 (4%)

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 6   LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 65

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 66  KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 125

Query: 296 KT 297
           KT
Sbjct: 126 KT 127



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/74 (45%), Positives = 46/74 (62%), Gaps = 1/74 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 54  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 113

Query: 60  SEMKLFVKIPTNQT 73
             M++FVK  T +T
Sbjct: 114 GGMQIFVKTLTGKT 127



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 6/107 (5%)

Query: 326 QSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKE 385
           Q ++FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +
Sbjct: 4   QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 63

Query: 386 MAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
             K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 64  NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 110


>gi|323208|gb|AAA42855.1| nonstructural protein; putative helicase/protease; contains
            duplication; contains ubiquitin-coding region; putative,
            partial [Bovine viral diarrhea virus 1]
          Length = 1896

 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 51/107 (47%), Positives = 70/107 (65%), Gaps = 3/107 (2%)

Query: 253  QDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQ 309
            Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T++
Sbjct: 954  QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 1013

Query: 310  DVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
            +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 1014 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 1060



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/130 (44%), Positives = 78/130 (60%), Gaps = 4/130 (3%)

Query: 7    EPIKNLKAMIHV-KEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKL 64
            E ++  K  +H  KEGI  D   L FAG +LE GR L DY I+  STLH + +    M++
Sbjct: 933  ENVEAAKGYVHQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 992

Query: 65   FVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNI 124
            FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++  NI
Sbjct: 993  FVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNI 1050

Query: 125  KSESIIHLVF 134
            + ES +HLV 
Sbjct: 1051 QKESTLHLVL 1060



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/116 (40%), Positives = 70/116 (60%), Gaps = 1/116 (0%)

Query: 93   QVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIV 152
            Q KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV   +  + IFVK  TG+ +
Sbjct: 944  QDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 1002

Query: 153  NLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 1003 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 1058



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 3/109 (2%)

Query: 174  GVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVE 230
            G+      +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE
Sbjct: 948  GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 1007

Query: 231  VLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
                + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 1008 PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 1056



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 55/116 (47%), Gaps = 6/116 (5%)

Query: 317  DKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISL 376
            DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +I+L
Sbjct: 945  DKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL 1004

Query: 377  SISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
             +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 1005 EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 1060



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1    MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
            ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 1004 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 1059


>gi|5523973|gb|AAD44039.1|AF104022_1 polyprotein [Bovine viral diarrhea virus 2]
          Length = 228

 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 53/112 (47%), Positives = 72/112 (64%), Gaps = 3/112 (2%)

Query: 248 LSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQP 304
           L L  Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P
Sbjct: 55  LQLYQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEP 114

Query: 305 YNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
            +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 115 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 166



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/107 (46%), Positives = 67/107 (62%), Gaps = 3/107 (2%)

Query: 29  LFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQN 87
           L FAG +LE GR L DY I+  STLH + +    M++FVK  T +T T+ E  P  T++N
Sbjct: 62  LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVEPSDTIEN 120

Query: 88  IKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVF 134
           +K  IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV 
Sbjct: 121 VKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVL 166



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 74/131 (56%), Gaps = 1/131 (0%)

Query: 78  EAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPK 137
           E+   H    +K   Q K+ +Q  Q  L++ GK L ED  T++  NI+ ES +HLV   +
Sbjct: 35  ESSGIHPQSTLKLPHQRKKWLQLYQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLR 93

Query: 138 EILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAF 197
             + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ 
Sbjct: 94  GGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 153

Query: 198 YDMKDECLLEM 208
           Y+++ E  L +
Sbjct: 154 YNIQKESTLHL 164



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 58/104 (55%), Gaps = 3/104 (2%)

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 62  LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 121

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVL 282
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L ++
Sbjct: 122 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 165



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 6/110 (5%)

Query: 323 LHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISE 382
           L+ Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+
Sbjct: 57  LYQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 116

Query: 383 VKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
             E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 117 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 166



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 110 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 165


>gi|61741149|gb|AAX54530.1| polyubiquitin [Fistulifera pelliculosa]
          Length = 120

 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 50/103 (48%), Positives = 67/103 (65%), Gaps = 3/103 (2%)

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITLDV+P +T+ +VK 
Sbjct: 1   FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKT 60

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 61  KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 103



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 55/121 (45%), Positives = 75/121 (61%), Gaps = 3/121 (2%)

Query: 31  FAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIK 89
           FAG +LE GR L DY I+  STLH + +    M++FVK  T +T T+ +  P  T+ N+K
Sbjct: 1   FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL-DVEPSDTIDNVK 59

Query: 90  TMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATG 149
           T IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV   +  + IFVK  TG
Sbjct: 60  TKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 118

Query: 150 E 150
           +
Sbjct: 119 K 119



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 67/116 (57%), Gaps = 4/116 (3%)

Query: 107 YDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVK 166
           + GK L ED  T++  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VK
Sbjct: 1   FAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVK 59

Query: 167 AIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRT 219
             +    G+      +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T
Sbjct: 60  TKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKT 115



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 65/120 (54%), Gaps = 6/120 (5%)

Query: 184 YEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKE 240
           + GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + +VK 
Sbjct: 1   FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKT 60

Query: 241 IVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKT 297
            + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKT
Sbjct: 61  KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 120



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/74 (44%), Positives = 44/74 (59%), Gaps = 1/74 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 47  LDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 106

Query: 60  SEMKLFVKIPTNQT 73
             M++FVK  T +T
Sbjct: 107 GGMQIFVKTLTGKT 120



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 6/103 (5%)

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 1   FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKT 60

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 61  KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 103


>gi|3158372|gb|AAC39466.1| polyubiquitin [Arabidopsis thaliana]
          Length = 137

 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 59/134 (44%), Positives = 81/134 (60%), Gaps = 3/134 (2%)

Query: 35  RLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQ 93
           +LE GR L DY I+  STLH + +    M++FVK  T +T T+ E     T+ N+K  IQ
Sbjct: 1   QLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQ 59

Query: 94  VKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVN 153
            KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +  + IFVK  TG+ ++
Sbjct: 60  DKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIS 118

Query: 154 LEVKHSFAIRDVKA 167
           LEV+ S  I +VKA
Sbjct: 119 LEVESSDTIDNVKA 132



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 55/135 (40%), Positives = 75/135 (55%), Gaps = 3/135 (2%)

Query: 261 KLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFD 317
           +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ D
Sbjct: 1   QLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD 60

Query: 318 KLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLS 377
           K   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +ISL 
Sbjct: 61  KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTISLE 120

Query: 378 ISISEVKEMAKVKFQ 392
           +  S+  +  K K Q
Sbjct: 121 VESSDTIDNVKAKIQ 135



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 73/129 (56%), Gaps = 3/129 (2%)

Query: 114 EDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVV 173
           ED  T+   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    
Sbjct: 3   EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 62

Query: 174 GVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVE 230
           G+      +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE
Sbjct: 63  GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTISLEVE 122

Query: 231 VLIVVRDVK 239
               + +VK
Sbjct: 123 SSDTIDNVK 131



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/137 (37%), Positives = 78/137 (56%), Gaps = 6/137 (4%)

Query: 188 KLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVAN 244
           +LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +
Sbjct: 1   QLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD 60

Query: 245 IIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLD 301
              +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTI+L+
Sbjct: 61  KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTISLE 120

Query: 302 VQPYNTVQDVKVKLFDK 318
           V+  +T+ +VK K+ DK
Sbjct: 121 VESSDTIDNVKAKIQDK 137



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 2/96 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 43  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 102

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVK 95
             M++FVK  T +T + +E     T+ N+K  IQ K
Sbjct: 103 GGMQIFVKTLTGKTIS-LEVESSDTIDNVKAKIQDK 137



 Score = 42.4 bits (98), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 6/99 (6%)

Query: 334 RLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQA 393
           +L +   LA YNIQK STLH+VL     +          +I+L +  S+  +  K K Q 
Sbjct: 1   QLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD 60

Query: 394 A------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
                   + L+     L+D RTLADY +     + LV 
Sbjct: 61  KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 99


>gi|30983942|gb|AAP40646.1| putative polyubiquitin [Gossypium barbadense]
          Length = 134

 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 52/107 (48%), Positives = 66/107 (61%), Gaps = 3/107 (2%)

Query: 253 QDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQ 309
           Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T  
Sbjct: 22  QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTTD 81

Query: 310 DVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           +VK K+ DK   P   Q ++FAGK L +   LA YNIQK STLH+VL
Sbjct: 82  NVKAKIQDKEGIPPDQQRLIFAGKELEDGRTLADYNIQKESTLHLVL 128



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 59/130 (45%), Positives = 76/130 (58%), Gaps = 3/130 (2%)

Query: 6   SEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKL 64
           ++ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +    M++
Sbjct: 1   ADTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQI 60

Query: 65  FVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNI 124
           FVK  T +T T +E     T  N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI
Sbjct: 61  FVKTLTGKTIT-LEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKEL-EDGRTLADYNI 118

Query: 125 KSESIIHLVF 134
           + ES +HLV 
Sbjct: 119 QKESTLHLVL 128



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 51/125 (40%), Positives = 74/125 (59%), Gaps = 1/125 (0%)

Query: 84  TVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIF 143
           T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +  + IF
Sbjct: 3   TIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIF 61

Query: 144 VKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDE 203
           VK  TG+ + LEV+ S    +VKA +    G+      +I+ GK+LED +TLA Y+++ E
Sbjct: 62  VKTLTGKTITLEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKELEDGRTLADYNIQKE 121

Query: 204 CLLEM 208
             L +
Sbjct: 122 STLHL 126



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 6/127 (4%)

Query: 306 NTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIEL 365
           +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +   
Sbjct: 2   DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIF 61

Query: 366 PLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLS 419
                  +I+L +  S+  +  K K Q         + L+     L+D RTLADY +   
Sbjct: 62  VKTLTGKTITLEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKELEDGRTLADYNIQKE 121

Query: 420 EKVVLVF 426
             + LV 
Sbjct: 122 STLHLVL 128



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 63/122 (51%), Gaps = 3/122 (2%)

Query: 161 AIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFV 217
            I +VKA +    G+      +I+ GK+LED +TLA Y+++ E  L +       +QIFV
Sbjct: 3   TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFV 62

Query: 218 RTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNY 277
           +T   + + LEVE      +VK  + +   +    Q L +AG +LE  +TLA Y I+   
Sbjct: 63  KTLTGKTITLEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKELEDGRTLADYNIQKES 122

Query: 278 VL 279
            L
Sbjct: 123 TL 124



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 34/56 (60%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+   N+KA I  KEGI  D   L FAG  LE GR L DY I+  STLH +
Sbjct: 72  LEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKELEDGRTLADYNIQKESTLHLV 127


>gi|5523985|gb|AAD44045.1|AF104028_1 polyprotein [Bovine viral diarrhea virus 2]
          Length = 357

 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 51/107 (47%), Positives = 70/107 (65%), Gaps = 3/107 (2%)

Query: 253 QDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQ 309
           Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T++
Sbjct: 189 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 248

Query: 310 DVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 249 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSGYNIQKESTLHLVL 295



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/120 (45%), Positives = 72/120 (60%), Gaps = 3/120 (2%)

Query: 16  IHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTA 74
           I   EGI  D   L FAG +LE GR L DY I+  STLH + +    M++FVK  T +T 
Sbjct: 178 IQDNEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 237

Query: 75  TVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVF 134
           T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV 
Sbjct: 238 TL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSGYNIQKESTLHLVL 295



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 47/117 (40%), Positives = 70/117 (59%), Gaps = 1/117 (0%)

Query: 92  IQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEI 151
           IQ  EGI  DQ  L++ GK L ED  T++  NI+ ES +HLV   +  + IFVK  TG+ 
Sbjct: 178 IQDNEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 236

Query: 152 VNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
           + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 237 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSGYNIQKESTLHL 293



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L  Y I+  STLH +
Sbjct: 239 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSGYNIQKESTLHLV 294


>gi|5523987|gb|AAD44046.1|AF104029_1 polyprotein [Bovine viral diarrhea virus 2]
          Length = 395

 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 51/107 (47%), Positives = 70/107 (65%), Gaps = 3/107 (2%)

Query: 253 QDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQ 309
           Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T++
Sbjct: 227 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 286

Query: 310 DVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 287 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 333



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/120 (46%), Positives = 73/120 (60%), Gaps = 3/120 (2%)

Query: 16  IHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTA 74
           I  KEGI  D   L FAG +LE GR L DY I+  STLH + +    M++FVK  T +T 
Sbjct: 216 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 275

Query: 75  TVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVF 134
           T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV 
Sbjct: 276 T-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVL 333



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 48/117 (41%), Positives = 71/117 (60%), Gaps = 1/117 (0%)

Query: 92  IQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEI 151
           IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV   +  + IFVK  TG+ 
Sbjct: 216 IQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 274

Query: 152 VNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
           + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 275 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 331



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 60/112 (53%), Gaps = 3/112 (2%)

Query: 174 GVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVE 230
           G+      +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE
Sbjct: 221 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 280

Query: 231 VLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVL 282
               + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L ++
Sbjct: 281 PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 332



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 64/142 (45%), Gaps = 15/142 (10%)

Query: 300 LDVQPYNTVQDVKV---------KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHS 350
           + + P  T +D K          K+ DK   P   Q ++FAGK+L +   L+ YNIQK S
Sbjct: 192 MKIAPKETEKDSKTRPPDVTDYFKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 251

Query: 351 TLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVA 404
           TLH+VL     +          +I+L +  S+  E  K K Q         + L+     
Sbjct: 252 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ 311

Query: 405 LQDDRTLADYGMDLSEKVVLVF 426
           L+D RTL+DY +     + LV 
Sbjct: 312 LEDGRTLSDYNIQKESTLHLVL 333



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 277 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 332


>gi|154416813|ref|XP_001581428.1| polyubiquitin [Trichomonas vaginalis G3]
 gi|121915655|gb|EAY20442.1| polyubiquitin, putative [Trichomonas vaginalis G3]
          Length = 147

 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 57/144 (39%), Positives = 82/144 (56%), Gaps = 3/144 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + DVK  + +   +    Q L +AG +LE   TL  Y 
Sbjct: 1   MQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYS 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+ +  L +   L    QIFVKT  GK ITL+V+P + ++DVK K+ DK   P   Q ++
Sbjct: 61  IQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLH 353
           FAGK+L + + L  Y+IQK S L 
Sbjct: 121 FAGKQLEDGNTLQDYSIQKDSILR 144



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 84/145 (57%), Gaps = 2/145 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +  T+ E  P   ++++K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKHITL-EVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQL-EDGNTLQD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            +I+ +S +HLV   +  + IFVK  TG+ + LEV+ +  I DVKA +    G+      
Sbjct: 59  YSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLL 206
           +I+ GK+LED  TL  Y ++ + +L
Sbjct: 119 LIFAGKQLEDGNTLQDYSIQKDSIL 143



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/135 (39%), Positives = 81/135 (60%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ ++ I+++KA I  KEGI  D   L FAG +LE G  L DY I+ +STLH + +  
Sbjct: 15  LEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +  T +E  P   ++++K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKHIT-LEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQL-EDGNTL 132

Query: 120 TSMNIKSESIIHLVF 134
              +I+ +SI+   F
Sbjct: 133 QDYSIQKDSILRCGF 147



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 75/143 (52%), Gaps = 3/143 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ +  I DVKA +    G+      +I+ GK+LED  TL  Y 
Sbjct: 1   MQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYS 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ +  L +       +QIFV+T   + + LEVE    + DVK  + +   +    Q L 
Sbjct: 61  IQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVL 279
           +AG +LE   TL  Y I+ + +L
Sbjct: 121 FAGKQLEDGNTLQDYSIQKDSIL 143



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 71/135 (52%), Gaps = 6/135 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GK ITL+V+P + ++DVK K+ DK   P   Q ++FAGK+L + + L  Y+
Sbjct: 1   MQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYS 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +           I+L +  ++  E  K K Q         + L+
Sbjct: 61  IQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLADY 414
                L+D  TL DY
Sbjct: 121 FAGKQLEDGNTLQDY 135


>gi|2995949|gb|AAC08400.1| ubiquitin, partial [Mesembryanthemum crystallinum]
          Length = 111

 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 51/105 (48%), Positives = 67/105 (63%), Gaps = 3/105 (2%)

Query: 255 LFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDV 311
           L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +V
Sbjct: 1   LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 60

Query: 312 KVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 61  KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 105



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/107 (45%), Positives = 64/107 (59%), Gaps = 3/107 (2%)

Query: 29  LFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQN 87
           L FAG +LE GR L DY I+  STLH + +    M++FVK  T +T T+ E     T+ N
Sbjct: 1   LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDN 59

Query: 88  IKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVF 134
           +K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV 
Sbjct: 60  VKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVL 105



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 41/104 (39%), Positives = 62/104 (59%), Gaps = 1/104 (0%)

Query: 105 LVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRD 164
           L++ GK L ED  T+   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +
Sbjct: 1   LIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDN 59

Query: 165 VKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
           VKA +    G+      +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 60  VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 103



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 3/101 (2%)

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 1   LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 60

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 61  KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 101



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 51/105 (48%), Gaps = 6/105 (5%)

Query: 328 IVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMA 387
           ++FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +  
Sbjct: 1   LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 60

Query: 388 KVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 61  KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 105



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 49  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 104


>gi|5523977|gb|AAD44041.1|AF104024_1 polyprotein [Bovine viral diarrhea virus 2]
          Length = 365

 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 51/107 (47%), Positives = 70/107 (65%), Gaps = 3/107 (2%)

Query: 253 QDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQ 309
           Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T++
Sbjct: 197 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 256

Query: 310 DVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 257 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 303



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/118 (46%), Positives = 72/118 (61%), Gaps = 3/118 (2%)

Query: 18  VKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATV 76
           VK GI  D   L FAG +LE GR L DY I+  STLH + +    M++FVK  T +T T+
Sbjct: 188 VKGGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL 247

Query: 77  VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVF 134
            E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV 
Sbjct: 248 -EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVL 303



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/115 (40%), Positives = 69/115 (60%), Gaps = 1/115 (0%)

Query: 94  VKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVN 153
           VK GI  DQ  L++ GK L ED  T++  NI+ ES +HLV   +  + IFVK  TG+ + 
Sbjct: 188 VKGGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 246

Query: 154 LEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
           LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 247 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 301



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 60/112 (53%), Gaps = 3/112 (2%)

Query: 174 GVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVE 230
           G+      +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE
Sbjct: 191 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 250

Query: 231 VLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVL 282
               + +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L ++
Sbjct: 251 PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 302



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 6/111 (5%)

Query: 322 PLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISIS 381
           P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S
Sbjct: 193 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPS 252

Query: 382 EVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           +  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 253 DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 303



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 247 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 302


>gi|225704622|gb|ACO08157.1| Ubiquitin [Oncorhynchus mykiss]
          Length = 144

 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 83/147 (56%), Gaps = 11/147 (7%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ           ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPGDTIENVKAKIQDKEGIPPDQL----------EDGRTLSD 49

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +V A +    G+      
Sbjct: 50  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQR 109

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 110 LIFAGKQLEDGRTLSDYNIQKESTLHL 136



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 85/147 (57%), Gaps = 12/147 (8%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK   A I D      D      +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPGDTIENVK---AKIQDKEGIPPD------QLEDGRTLSDYN 51

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++V  K+ DK   P   Q ++
Sbjct: 52  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLI 111

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 112 FAGKQLEDGRTLSDYNIQKESTLHLVL 138



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/135 (41%), Positives = 79/135 (58%), Gaps = 12/135 (8%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+  + I+N+KA I  KEGI  D         +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPGDTIENVKAKIQDKEGIPPD---------QLEDGRTLSDYNIQKESTLHLVLRLR 65

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+   IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 66  GGMQIFVKTLTGKTIT-LEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 123

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 124 SDYNIQKESTLHLVL 138



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/147 (34%), Positives = 77/147 (52%), Gaps = 15/147 (10%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P           +L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEPGDTIENVKAKIQDKEGIPPD---------QLEDGRTLSDYN 51

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKE--MAKVKFQAAV----KELL 399
           IQK STLH+VL     +          +I+L +  S+  E  MAK++ +  +    + L+
Sbjct: 52  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLI 111

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L+D RTL+DY +     + LV 
Sbjct: 112 FAGKQLEDGRTLSDYNIQKESTLHLVL 138


>gi|380016682|ref|XP_003692305.1| PREDICTED: uncharacterized protein LOC100871808 [Apis florea]
          Length = 377

 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/158 (38%), Positives = 89/158 (56%), Gaps = 10/158 (6%)

Query: 62  MKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMT 120
           M++FVK  T +T T+ VEA    T++N+K  IQ KEGI  DQ  L++ GK L ED  T++
Sbjct: 1   MQIFVKTLTGKTITLEVEAS--DTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLS 57

Query: 121 SMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADH 180
             NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+     
Sbjct: 58  DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ 117

Query: 181 IMIYEGKKLEDSKTLAFYDMKDECLLEMFPSSIQIFVR 218
            +I+ GK+LED + L       +C L   P   ++  R
Sbjct: 118 RLIFAGKQLEDGRVLG------DCPLVQAPQWGRVRER 149



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 51/133 (38%), Positives = 77/133 (57%), Gaps = 3/133 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLA 342
           FAGK+L +  VL 
Sbjct: 121 FAGKQLEDGRVLG 133



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/116 (45%), Positives = 74/116 (63%), Gaps = 4/116 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKE 114
             M++FVK  T +T T+ VEA    T++N+K  IQ KEGI  DQ  L++ GK L++
Sbjct: 75  GGMQIFVKTLTGKTITLEVEAS--DTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 128



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/134 (38%), Positives = 72/134 (53%), Gaps = 6/134 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL     +          +I+L +  S+  E  K K Q         + L+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 400 VDQVALQDDRTLAD 413
                L+D R L D
Sbjct: 121 FAGKQLEDGRVLGD 134



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 72/133 (54%), Gaps = 3/133 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLA 269
           +AG +LE  + L 
Sbjct: 121 FAGKQLEDGRVLG 133



 Score = 39.3 bits (90), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 20/42 (47%), Positives = 29/42 (69%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGRLV 42
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR++
Sbjct: 91  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRVL 132


>gi|255965390|gb|ACU45000.1| unknown [Pfiesteria piscicida]
          Length = 133

 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/108 (48%), Positives = 67/108 (62%), Gaps = 3/108 (2%)

Query: 252 NQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTV 308
            Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+
Sbjct: 20  QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 79

Query: 309 QDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
             VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 80  DMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 127



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/125 (40%), Positives = 74/125 (59%), Gaps = 1/125 (0%)

Query: 84  TVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIF 143
           T+  +K+ IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +  + IF
Sbjct: 2   TIDMVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIF 60

Query: 144 VKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDE 203
           VK  TG+ + LEV+ S  I  VK+ +    G+      +I+ GK+LED +TLA Y+++ E
Sbjct: 61  VKTLTGKTITLEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 120

Query: 204 CLLEM 208
             L +
Sbjct: 121 STLHL 125



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/129 (43%), Positives = 75/129 (58%), Gaps = 3/129 (2%)

Query: 7   EPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLF 65
           + I  +K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +    M++F
Sbjct: 1   DTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIF 60

Query: 66  VKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIK 125
           VK  T +T T +E     T+  +K+ IQ KEGI  DQ  L++ GK L ED  T+   NI+
Sbjct: 61  VKTLTGKTIT-LEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQ 118

Query: 126 SESIIHLVF 134
            ES +HLV 
Sbjct: 119 KESTLHLVL 127



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 63/127 (49%), Gaps = 6/127 (4%)

Query: 306 NTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIEL 365
           +T+  VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +   
Sbjct: 1   DTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIF 60

Query: 366 PLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLS 419
                  +I+L +  S+  +M K K Q         + L+     L+D RTLADY +   
Sbjct: 61  VKTLTGKTITLEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 120

Query: 420 EKVVLVF 426
             + LV 
Sbjct: 121 STLHLVL 127



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 3/118 (2%)

Query: 165 VKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPI 221
           VK+ +    G+      +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T  
Sbjct: 6   VKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLT 65

Query: 222 EEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
            + + LEVE    +  VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 66  GKTITLEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 123



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I  +K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 71  LEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 126


>gi|284927592|gb|ADC29516.1| polyubiquitin [Citrus sinensis]
 gi|376008204|gb|AFB18313.1| ubiquitin, partial [Citrus maxima]
          Length = 106

 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 50/103 (48%), Positives = 66/103 (64%), Gaps = 3/103 (2%)

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 1   FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 60

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 61  KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 103



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/105 (45%), Positives = 63/105 (60%), Gaps = 3/105 (2%)

Query: 31  FAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIK 89
           FAG +LE GR L DY I+  STLH + +    M++FVK  T +T T+ E     T+ N+K
Sbjct: 1   FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVK 59

Query: 90  TMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVF 134
             IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV 
Sbjct: 60  AKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVL 103



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 1/102 (0%)

Query: 107 YDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVK 166
           + GK L ED  T+   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK
Sbjct: 1   FAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 59

Query: 167 AIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
           A +    G+      +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 60  AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 101



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 3/99 (3%)

Query: 184 YEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKE 240
           + GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +VK 
Sbjct: 1   FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 60

Query: 241 IVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
            + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 61  KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 99



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 47  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 102



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 49/103 (47%), Gaps = 6/103 (5%)

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +  K 
Sbjct: 1   FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 60

Query: 390 KFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 61  KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 103


>gi|6650740|gb|AAF21992.1| polyubiquitin [Lilium longiflorum]
          Length = 153

 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 84/147 (57%), Gaps = 5/147 (3%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDREGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I     L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   + ++
Sbjct: 61  IHKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKEGIPPTTR-LI 119

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           FAG    +   LA YNIQK STLH+VL
Sbjct: 120 FAGT-AEDGRTLADYNIQKESTLHLVL 145



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 83/147 (56%), Gaps = 4/147 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ +EGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDREGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI  ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIHKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKEGIPPTTR- 117

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ G   ED +TLA Y+++ E  L +
Sbjct: 118 LIFAGTA-EDGRTLADYNIQKESTLHL 143



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/135 (40%), Positives = 75/135 (55%), Gaps = 5/135 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  +EGI  D   L FAG +LE GR L DY I   STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDREGIPPDQQRLIFAGKQLEDGRTLADYNIHKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  I  KEGI      L++ G    ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIHDKEGIPP-TTRLIFAG--TAEDGRTL 130

Query: 120 TSMNIKSESIIHLVF 134
              NI+ ES +HLV 
Sbjct: 131 ADYNIQKESTLHLVL 145



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/146 (36%), Positives = 75/146 (51%), Gaps = 6/146 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ D+   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDREGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ-----AAVKELLV 400
           I K STLH+VL     +          +I+L +  S+  +  K K            L+ 
Sbjct: 61  IHKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKEGIPPTTRLIF 120

Query: 401 DQVALQDDRTLADYGMDLSEKVVLVF 426
              A +D RTLADY +     + LV 
Sbjct: 121 AGTA-EDGRTLADYNIQKESTLHLVL 145



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 82/161 (50%), Gaps = 12/161 (7%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDREGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           +  E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    + L 
Sbjct: 61  IHKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKEGIPPTTR-LI 119

Query: 257 YAGTKLEACKTLASYGIKNNYVLDVLPSPFQIFVKTWGGKT 297
           +AGT  E  +TLA Y I+         S   + ++  GG T
Sbjct: 120 FAGTA-EDGRTLADYNIQKE-------STLHLVLRLRGGAT 152


>gi|145503723|ref|XP_001437835.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124404993|emb|CAK70438.1| unnamed protein product [Paramecium tetraurelia]
          Length = 271

 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 87/147 (59%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +  P  T+  +K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-DVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IF+K  TG ++NL+V+ + ++  +K  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFIKTLTGRLINLDVESTDSVESLKKQIQDKEGIPPNQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ G +LED KTL  Y++++E  + +
Sbjct: 119 LIFSGHQLEDEKTLLEYNVENESTIHL 145



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 83/147 (56%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + L+VE    +  VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIF+KT  G+ I LDV+  ++V+ +K ++ DK   P + Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFIKTLTGRLINLDVESTDSVESLKKQIQDKEGIPPNQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
           F+G +L +   L  YN++  ST+H+VL
Sbjct: 121 FSGHQLEDEKTLLEYNVENESTIHLVL 147



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/135 (40%), Positives = 80/135 (59%), Gaps = 5/135 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I  +KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
             M++F+K  T +   + VE+    +V+++K  IQ KEGI  +Q  L++ G  L ED  T
Sbjct: 75  GGMQIFIKTLTGRLINLDVESTD--SVESLKKQIQDKEGIPPNQQRLIFSGHQL-EDEKT 131

Query: 119 MTSMNIKSESIIHLV 133
           +   N+++ES IHLV
Sbjct: 132 LLEYNVENESTIHLV 146



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/150 (37%), Positives = 79/150 (52%), Gaps = 16/150 (10%)

Query: 287 QIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNI 346
           QIFVKT  GKTITLDV+P +T+  VK K+ DK   P   Q ++FAGK+L +   L+ YNI
Sbjct: 2   QIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

Query: 347 QKHSTLHMVL-----------APSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAAV 395
           QK STLH+VL             + R+I L +   D   SL   I +     K       
Sbjct: 62  QKESTLHLVLRLRGGMQIFIKTLTGRLINLDVESTDSVESLKKQIQD-----KEGIPPNQ 116

Query: 396 KELLVDQVALQDDRTLADYGMDLSEKVVLV 425
           + L+     L+D++TL +Y ++    + LV
Sbjct: 117 QRLIFSGHQLEDEKTLLEYNVENESTIHLV 146


>gi|62953168|emb|CAG28691.1| polyubiquitin [Fusarium fujikuroi]
          Length = 116

 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 50/108 (46%), Positives = 68/108 (62%), Gaps = 3/108 (2%)

Query: 252 NQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTV 308
            Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+
Sbjct: 3   QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 62

Query: 309 QDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
            +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 63  DNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 110



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/111 (45%), Positives = 67/111 (60%), Gaps = 3/111 (2%)

Query: 25  DICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYH 83
           D   L FAG +LE GR L DY I+  STLH + +    M++FVK  T +T T+ E     
Sbjct: 2   DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSD 60

Query: 84  TVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVF 134
           T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV 
Sbjct: 61  TIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVL 110



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/108 (37%), Positives = 65/108 (60%), Gaps = 1/108 (0%)

Query: 101 DQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSF 160
           DQ  L++ GK L ED  T++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S 
Sbjct: 2   DQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD 60

Query: 161 AIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
            I +VK+ +    G+      +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 61  TIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 108



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 3/101 (2%)

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 6   LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 65

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 66  KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 106



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 6/107 (5%)

Query: 326 QSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKE 385
           Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  +
Sbjct: 4   QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 63

Query: 386 MAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
             K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 64  NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 110



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 54  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109


>gi|196011321|ref|XP_002115524.1| hypothetical protein TRIADDRAFT_29688 [Trichoplax adhaerens]
 gi|190581812|gb|EDV21887.1| hypothetical protein TRIADDRAFT_29688 [Trichoplax adhaerens]
          Length = 384

 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 71/288 (24%), Positives = 146/288 (50%), Gaps = 15/288 (5%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + + VK+ +G ++ L+ + +  +RD+K  +   V    +   +IY GK+L+D K L  Y 
Sbjct: 1   MQVVVKSQSGNLLLLQGEANDTVRDLKEKLYYHVHNPPSQQRLIYRGKQLDDEKLLTSYS 60

Query: 200 MKDECLLEMFPSS---IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           + +  L+   P S   I++       + + L VE+   +  VKE++    ++ +  Q L 
Sbjct: 61  IANNALIRYLPVSKEEIRLNCNLFTGQFLSLNVELDQSICHVKELLHQQTNIPMEKQRLL 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
            A  +L+  +TL  YG++ N  +++   LP    + +K    KTIT++++  +TV D+K 
Sbjct: 121 LANKQLKDTETLRCYGMQENDTINMVLKLPRRIPLHIKMNHDKTITIEIESNSTVADIKE 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
            +F     P + Q + + GK + ++  +  Y ++ + T++M+    SR  +  ++ ++  
Sbjct: 181 VVFINNNMPPNKQRLTYNGKVMLDSTTVDDYGLKNYDTIYMIHRRKSR-NQAVIVQMEND 239

Query: 374 ISLSI------SISEVKEMAKVKFQAAVKE--LLVDQVALQDDRTLAD 413
            +LS+      +I E+K + + +     ++  LL D V L +  TLAD
Sbjct: 240 QTLSVPAKEDSTIQEIKHLIEEQTNIPWRQQRLLHDDVLLNNSSTLAD 287



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/248 (23%), Positives = 120/248 (48%), Gaps = 8/248 (3%)

Query: 102 QFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFA 161
           Q  L+Y GK L +D   +TS +I + ++I  +   KE + +     TG+ ++L V+   +
Sbjct: 40  QQRLIYRGKQL-DDEKLLTSYSIANNALIRYLPVSKEEIRLNCNLFTGQFLSLNVELDQS 98

Query: 162 IRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVR 218
           I  VK ++     +      ++   K+L+D++TL  Y M++   + M    P  I + ++
Sbjct: 99  ICHVKELLHQQTNIPMEKQRLLLANKQLKDTETLRCYGMQENDTINMVLKLPRRIPLHIK 158

Query: 219 TPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNN-- 276
              ++ + +E+E    V D+KE+V    ++    Q L Y G  +    T+  YG+KN   
Sbjct: 159 MNHDKTITIEIESNSTVADIKEVVFINNNMPPNKQRLTYNGKVMLDSTTVDDYGLKNYDT 218

Query: 277 -YVLDVLPSPFQ-IFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKR 334
            Y++    S  Q + V+    +T+++  +  +T+Q++K  + ++   P   Q ++     
Sbjct: 219 IYMIHRRKSRNQAVIVQMENDQTLSVPAKEDSTIQEIKHLIEEQTNIPWRQQRLLHDDVL 278

Query: 335 LFENHVLA 342
           L  +  LA
Sbjct: 279 LNNSSTLA 286



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 68/339 (20%), Positives = 155/339 (45%), Gaps = 8/339 (2%)

Query: 29  LFFAGDRLEAGRLV-DYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQN 87
           L + G +L+  +L+  Y I NN+ + +L  +  E++L   + T Q  ++   +   ++ +
Sbjct: 43  LIYRGKQLDDEKLLTSYSIANNALIRYLPVSKEEIRLNCNLFTGQFLSLNVELD-QSICH 101

Query: 88  IKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAA 147
           +K ++  +  I  ++  L+   K LK DT T+    ++    I++V      + + +K  
Sbjct: 102 VKELLHQQTNIPMEKQRLLLANKQLK-DTETLRCYGMQENDTINMVLKLPRRIPLHIKMN 160

Query: 148 TGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLE 207
             + + +E++ +  + D+K +V     +      + Y GK + DS T+  Y +K+   + 
Sbjct: 161 HDKTITIEIESNSTVADIKEVVFINNNMPPNKQRLTYNGKVMLDSTTVDDYGLKNYDTIY 220

Query: 208 MF----PSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLE 263
           M       +  + V+   ++ + +  +    ++++K ++    ++    Q L +    L 
Sbjct: 221 MIHRRKSRNQAVIVQMENDQTLSVPAKEDSTIQEIKHLIEEQTNIPWRQQRLLHDDVLLN 280

Query: 264 ACKTLASYGIKNNYVLDVLPSP-FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTP 322
              TLA   ++    L +  S   QI+++   GK ++L+V   + + D+K ++ DK    
Sbjct: 281 NSSTLADCQLQLPCQLQLFSSDILQIYIRLSVGKQLSLEVLEMDKIYDIKGRIEDKEGIS 340

Query: 323 LHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSR 361
           +  Q++ F GK L +   L   +I   S L + +    R
Sbjct: 341 ILQQTLRFKGKILKDQTTLKSCDIGSGSILQLKINVDDR 379



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 107/210 (50%), Gaps = 6/210 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGD-RLEAGRLVDYGIRNNSTLHFLHQNL 59
           ++++ +  + ++K ++ +   +  +   L + G   L++  + DYG++N  T++ +H+  
Sbjct: 167 IEIESNSTVADIKEVVFINNNMPPNKQRLTYNGKVMLDSTTVDDYGLKNYDTIYMIHRRK 226

Query: 60  SEMK-LFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
           S  + + V++  +QT +V  A    T+Q IK +I+ +  I   Q  L++D  LL   +  
Sbjct: 227 SRNQAVIVQMENDQTLSV-PAKEDSTIQEIKHLIEEQTNIPWRQQRLLHDDVLLNNSS-- 283

Query: 119 MTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAA 178
            T  + + +    L     +IL I+++ + G+ ++LEV     I D+K  +    G+S  
Sbjct: 284 -TLADCQLQLPCQLQLFSSDILQIYIRLSVGKQLSLEVLEMDKIYDIKGRIEDKEGISIL 342

Query: 179 DHIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
              + ++GK L+D  TL   D+    +L++
Sbjct: 343 QQTLRFKGKILKDQTTLKSCDIGSGSILQL 372



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 71/147 (48%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            Q+ VK+  G  + L  +  +TV+D+K KL+  +  P   Q +++ GK+L +  +L  Y+
Sbjct: 1   MQVVVKSQSGNLLLLQGEANDTVRDLKEKLYYHVHNPPSQQRLIYRGKQLDDEKLLTSYS 60

Query: 346 IQKHSTLHMVLAPSSRI-IELPLI---FIDPSISLSISISEVKEM--AKVKFQAAVKELL 399
           I  ++ +  +      I +   L    F+  ++ L  SI  VKE+   +       + LL
Sbjct: 61  IANNALIRYLPVSKEEIRLNCNLFTGQFLSLNVELDQSICHVKELLHQQTNIPMEKQRLL 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
           +    L+D  TL  YGM  ++ + +V 
Sbjct: 121 LANKQLKDTETLRCYGMQENDTINMVL 147


>gi|91081107|ref|XP_975512.1| PREDICTED: similar to ubiquitin C [Tribolium castaneum]
 gi|270005296|gb|EFA01744.1| hypothetical protein TcasGA2_TC007341 [Tribolium castaneum]
          Length = 149

 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 54/144 (37%), Positives = 81/144 (56%), Gaps = 1/144 (0%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV +   EI+ L+V     +  VK+ + N   +    Q + + G  LE   TL  Y 
Sbjct: 1   MQIFVESQTGEIITLQVHPADTIESVKQQIQNEKGIPADQQKMIHRGYPLEDSLTLVDYN 60

Query: 273 IKNNYVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAG 332
           IK    L  L +  QIFVKT  G+TITL+V P  T++++K K+ D+   P +LQ ++FAG
Sbjct: 61  IKEESTL-YLKNYIQIFVKTLNGETITLEVDPSETIENLKAKIQDQQGVPPNLQRLIFAG 119

Query: 333 KRLFENHVLARYNIQKHSTLHMVL 356
           ++L +   L+ YNIQ  S +  VL
Sbjct: 120 QQLEDGFTLSDYNIQDESIVRFVL 143



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/145 (35%), Positives = 86/145 (59%), Gaps = 6/145 (4%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FV+  T +  T+ +  P  T++++K  IQ ++GI +DQ  +++ G  L ED+ T+  
Sbjct: 1   MQIFVESQTGEIITL-QVHPADTIESVKQQIQNEKGIPADQQKMIHRGYPL-EDSLTLVD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NIK ES ++L    K  + IFVK   GE + LEV  S  I ++KA +    GV      
Sbjct: 59  YNIKEESTLYL----KNYIQIFVKTLNGETITLEVDPSETIENLKAKIQDQQGVPPNLQR 114

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLL 206
           +I+ G++LED  TL+ Y+++DE ++
Sbjct: 115 LIFAGQQLEDGFTLSDYNIQDESIV 139



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 78/140 (55%), Gaps = 1/140 (0%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFV++ TGEI+ L+V  +  I  VK  + +  G+ A    MI+ G  LEDS TL  Y+
Sbjct: 1   MQIFVESQTGEIITLQVHPADTIESVKQQIQNEKGIPADQQKMIHRGYPLEDSLTLVDYN 60

Query: 200 MKDECLLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAG 259
           +K+E  L    + IQIFV+T   E + LEV+    + ++K  + +   +    Q L +AG
Sbjct: 61  IKEESTL-YLKNYIQIFVKTLNGETITLEVDPSETIENLKAKIQDQQGVPPNLQRLIFAG 119

Query: 260 TKLEACKTLASYGIKNNYVL 279
            +LE   TL+ Y I++  ++
Sbjct: 120 QQLEDGFTLSDYNIQDESIV 139



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 75/135 (55%), Gaps = 7/135 (5%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAG-RLVDYGIRNNSTLHFLHQNL 59
           ++V  ++ I+++K  I  ++GI  D   +   G  LE    LVDY I+  STL+  +   
Sbjct: 15  LQVHPADTIESVKQQIQNEKGIPADQQKMIHRGYPLEDSLTLVDYNIKEESTLYLKNY-- 72

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             +++FVK    +T T+ E  P  T++N+K  IQ ++G+  +   L++ G+ L ED  T+
Sbjct: 73  --IQIFVKTLNGETITL-EVDPSETIENLKAKIQDQQGVPPNLQRLIFAGQQL-EDGFTL 128

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ESI+  V 
Sbjct: 129 SDYNIQDESIVRFVL 143


>gi|226509442|ref|NP_001150268.1| polyubiquitin containing 7 ubiquitin monomers [Zea mays]
 gi|195637954|gb|ACG38445.1| polyubiquitin containing 7 ubiquitin monomers [Zea mays]
          Length = 314

 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 139/287 (48%), Gaps = 10/287 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEA-GRLVDYGIRNNSTLHFLHQNL 59
           + VK ++ I  +K+ I   EGI     +LFFAG  LE   RL DY I  NS +     + 
Sbjct: 23  LDVKSTDTIDQIKSKIGALEGIDNSQQELFFAGSHLEKDNRLADYNIMTNSCVDLYVTD- 81

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++ V IP+      +  M   +V ++K MI+   GI  D+  L++  + L ED   +
Sbjct: 82  -GMQISVSIPSVWKTIKLNVMKSQSVADVKAMIEQMGGIPLDEQILMHGCQKL-EDNKLL 139

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +   + +   +H++  P + L I V     E +NL+VK  + + DVK ++ ++ G+ A  
Sbjct: 140 SQCGLSNGHTLHVLVRPTDRLHISVDVDGEETLNLDVKSWYTVADVKLMIDTLEGLPART 199

Query: 180 HIMIY-----EGKKLEDSKTLAFYDMKDECLLEMFPSSIQIFVRTPIEEIVRLEVEVLIV 234
            I+++         L+D +TL    +K+  ++ ++   +  FV+T     + L +     
Sbjct: 200 QILMHTQPGGANTVLKDIETLQNQGIKNNDIVALY-HKVNFFVKTYEGRNLVLSMRTCDT 258

Query: 235 VRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV 281
             ++ +++   ++++ G   L Y G  L    TL  + I+NN  +DV
Sbjct: 259 AEEIMKVIEEKLNVNTGVYYLHYRGRVLALGDTLRKHKIENNCTVDV 305



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 140/284 (49%), Gaps = 11/284 (3%)

Query: 84  TVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIF 143
           T+  IK+ I   EGI + Q  L + G  L++D   +   NI + S + L       +S+ 
Sbjct: 30  TIDQIKSKIGALEGIDNSQQELFFAGSHLEKDNR-LADYNIMTNSCVDLYVTDGMQISVS 88

Query: 144 VKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDE 203
           +  +  + + L V  S ++ DVKA++  + G+   + I+++  +KLED+K L+   + + 
Sbjct: 89  I-PSVWKTIKLNVMKSQSVADVKAMIEQMGGIPLDEQILMHGCQKLEDNKLLSQCGLSNG 147

Query: 204 CLLEMF--PSS-IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFY--- 257
             L +   P+  + I V    EE + L+V+    V DVK ++  +  L    Q L +   
Sbjct: 148 HTLHVLVRPTDRLHISVDVDGEETLNLDVKSWYTVADVKLMIDTLEGLPARTQILMHTQP 207

Query: 258 --AGTKLEACKTLASYGIKNNYVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKL 315
             A T L+  +TL + GIKNN ++  L      FVKT+ G+ + L ++  +T +++   +
Sbjct: 208 GGANTVLKDIETLQNQGIKNNDIV-ALYHKVNFFVKTYEGRNLVLSMRTCDTAEEIMKVI 266

Query: 316 FDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPS 359
            +KL     +  + + G+ L     L ++ I+ + T+ + L  S
Sbjct: 267 EEKLNVNTGVYYLHYRGRVLALGDTLRKHKIENNCTVDVRLRNS 310



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 78/153 (50%), Gaps = 8/153 (5%)

Query: 214 QIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGI 273
           +I++R  + + V L+V+    +  +K  +  +  +    Q+LF+AG+ LE    LA Y I
Sbjct: 12  KIYIR--MMKTVLLDVKSTDTIDQIKSKIGALEGIDNSQQELFFAGSHLEKDNRLADYNI 69

Query: 274 KNNYVLDV-LPSPFQIFVK---TWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
             N  +D+ +    QI V     W  KTI L+V    +V DVK  +      PL  Q ++
Sbjct: 70  MTNSCVDLYVTDGMQISVSIPSVW--KTIKLNVMKSQSVADVKAMIEQMGGIPLDEQILM 127

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRI 362
              ++L +N +L++  +    TLH+++ P+ R+
Sbjct: 128 HGCQKLEDNKLLSQCGLSNGHTLHVLVRPTDRL 160


>gi|242067711|ref|XP_002449132.1| hypothetical protein SORBIDRAFT_05g005570 [Sorghum bicolor]
 gi|241934975|gb|EES08120.1| hypothetical protein SORBIDRAFT_05g005570 [Sorghum bicolor]
          Length = 187

 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 107/216 (49%), Gaps = 32/216 (14%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK   G+I+ +EV+ S  + DV+A +            +I++G +L+      FY 
Sbjct: 1   MQIFVKMPNGKIITVEVEPSDTVGDVEAKI-------EDQQRIIFDGSRLDKKCKPGFYK 53

Query: 200 MKDECLLEMFPSSIQIFVRT-PIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYA 258
                       S+ I V+T PI + +R +V+    V D+K   A I D     Q L + 
Sbjct: 54  R----------GSMPIDVKTLPISKAIRYKVQFTDKVGDLK---AKIQD----QQRLLFK 96

Query: 259 GTKLEACKTLASYGIKNNYVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDK 318
           G +L   +TLA Y ++    L +     QIFVKT  G+TITL+V+P NT+ DVK K+   
Sbjct: 97  GQQLVDGQTLADYNVRRQSTLRLDCPVMQIFVKTCTGQTITLEVEPSNTIDDVKEKI--- 153

Query: 319 LQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHM 354
                  QS+ F G +L +   LA  N++  S LH+
Sbjct: 154 ----RGHQSLTFDGNKLDDAKTLAECNVRTGSNLHL 185



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 45/132 (34%), Positives = 70/132 (53%), Gaps = 20/132 (15%)

Query: 2   KVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLS 60
           KV+ ++ + +LKA I       +D   L F G +L  G+ L DY +R  STL     +  
Sbjct: 73  KVQFTDKVGDLKAKI-------QDQQRLLFKGQQLVDGQTLADYNVRRQSTLRL---DCP 122

Query: 61  EMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMT 120
            M++FVK  T QT T +E  P +T+ ++K  I+   G QS    L +DG  L +D  T+ 
Sbjct: 123 VMQIFVKTCTGQTIT-LEVEPSNTIDDVKEKIR---GHQS----LTFDGNKL-DDAKTLA 173

Query: 121 SMNIKSESIIHL 132
             N+++ S +HL
Sbjct: 174 ECNVRTGSNLHL 185



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 67/125 (53%), Gaps = 13/125 (10%)

Query: 72  QTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIH 131
           +T  + +A+ Y  VQ    +  +K  IQ DQ  L++ G+ L  D  T+   N++ +S + 
Sbjct: 62  KTLPISKAIRYK-VQFTDKVGDLKAKIQ-DQQRLLFKGQQL-VDGQTLADYNVRRQSTLR 118

Query: 132 LVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLED 191
           L  CP  ++ IFVK  TG+ + LEV+ S  I DVK  +            + ++G KL+D
Sbjct: 119 L-DCP--VMQIFVKTCTGQTITLEVEPSNTIDDVKEKI-------RGHQSLTFDGNKLDD 168

Query: 192 SKTLA 196
           +KTLA
Sbjct: 169 AKTLA 173


>gi|1353755|gb|AAB01783.1| ubiquitin, partial [Naegleria fowleri]
          Length = 118

 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 49/105 (46%), Positives = 68/105 (64%), Gaps = 3/105 (2%)

Query: 255 LFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDV 311
           L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+++V
Sbjct: 2   LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENV 61

Query: 312 KVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 62  KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 106



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/119 (44%), Positives = 73/119 (61%), Gaps = 3/119 (2%)

Query: 29  LFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQN 87
           L FAG +LE GR L DY I+  STLH + +    M++FVK  T +T T+ E     T++N
Sbjct: 2   LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESNDTIEN 60

Query: 88  IKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKA 146
           +K+ IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV   +  + IFVK 
Sbjct: 61  VKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKT 118



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 43/118 (36%), Positives = 70/118 (59%), Gaps = 4/118 (3%)

Query: 105 LVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRD 164
           L++ GK L ED  T++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ +  I +
Sbjct: 2   LIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIEN 60

Query: 165 VKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRT 219
           VK+ +    G+      +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T
Sbjct: 61  VKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKT 118



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 64/117 (54%), Gaps = 6/117 (5%)

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 2   LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENV 61

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKT 292
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT
Sbjct: 62  KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKT 118



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 44/68 (64%), Gaps = 1/68 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ ++ I+N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 50  LEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 109

Query: 60  SEMKLFVK 67
             M++FVK
Sbjct: 110 GGMQIFVK 117



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 6/105 (5%)

Query: 328 IVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMA 387
           ++FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  ++  E  
Sbjct: 2   LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENV 61

Query: 388 KVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 62  KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 106


>gi|125575126|gb|EAZ16410.1| hypothetical protein OsJ_31877 [Oryza sativa Japonica Group]
          Length = 322

 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 151/306 (49%), Gaps = 13/306 (4%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           +K++VK+    T  V       TV  IK+ +   EGI   +  + + G  LK +   +  
Sbjct: 14  LKIYVKMMKTFTLNVNST---DTVDQIKSKLSAIEGIDKSKQEMFFAGMHLKNEDK-LAD 69

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI + S + L       +S+ +  + G+   L ++ S +I D+KA +    G+   + I
Sbjct: 70  YNIMTNSSVDLYVTDAIQISVRI-PSVGKTTKLNMRKSNSIADIKAEIEQEEGILMNEQI 128

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEMF--PSS-IQIFVRTPIEEIVRLEVEVLIVVRDV 238
           ++Y G++LED++ L+  D++++    +   P+  + +F+    E+ + LE +    V DV
Sbjct: 129 LMYAGQQLEDNQLLSQCDLRNDQTFHVLVCPNDKLHVFINVRGEKTIGLETKRWYTVADV 188

Query: 239 KEIVANIIDLSLGNQDLFY----AGTKLEACKTLASYGIKNNYVLDVLPSPFQIFVKTWG 294
           K ++ N+  L   +Q L       G  L   + L    +KNN  L +L    Q FVK+W 
Sbjct: 189 KLMIENLEGLPACSQILTRMQSGVGVALTDGRMLQDQHVKNNDTL-LLQQNVQFFVKSWE 247

Query: 295 GKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHM 354
           GKT+T+ ++  +T + +K ++ +KL+    L  +   G+ L     L  + ++ +ST+++
Sbjct: 248 GKTLTMVLKTSDTGKQIKDRIAEKLRIKESLYYLCHKGRVLLTEDTLLDHEVESNSTVYI 307

Query: 355 VLAPSS 360
            L  S+
Sbjct: 308 RLRNSA 313



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 116/224 (51%), Gaps = 9/224 (4%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLE-AGRLVDYGIRNNSTLHFLHQNL 59
           + V  ++ +  +K+ +   EGI +   ++FFAG  L+   +L DY I  NS++     + 
Sbjct: 26  LNVNSTDTVDQIKSKLSAIEGIDKSKQEMFFAGMHLKNEDKLADYNIMTNSSVDLYVTD- 84

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             +++ V+IP+    T +     +++ +IK  I+ +EGI  ++  L+Y G+ L ED   +
Sbjct: 85  -AIQISVRIPSVGKTTKLNMRKSNSIADIKAEIEQEEGILMNEQILMYAGQQL-EDNQLL 142

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  +++++   H++ CP + L +F+     + + LE K  + + DVK ++ ++ G+ A  
Sbjct: 143 SQCDLRNDQTFHVLVCPNDKLHVFINVRGEKTIGLETKRWYTVADVKLMIENLEGLPACS 202

Query: 180 HIMIYE----GKKLEDSKTLAFYDMKDECLLEMFPSSIQIFVRT 219
            I+       G  L D + L    +K+   L +   ++Q FV++
Sbjct: 203 QILTRMQSGVGVALTDGRMLQDQHVKNNDTL-LLQQNVQFFVKS 245



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 86/155 (55%), Gaps = 4/155 (2%)

Query: 210 PSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLA 269
           P S++I+V+  + +   L V     V  +K  ++ I  +    Q++F+AG  L+    LA
Sbjct: 11  PKSLKIYVK--MMKTFTLNVNSTDTVDQIKSKLSAIEGIDKSKQEMFFAGMHLKNEDKLA 68

Query: 270 SYGIKNNYVLDV-LPSPFQIFVKTWG-GKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQS 327
            Y I  N  +D+ +    QI V+    GKT  L+++  N++ D+K ++  +    ++ Q 
Sbjct: 69  DYNIMTNSSVDLYVTDAIQISVRIPSVGKTTKLNMRKSNSIADIKAEIEQEEGILMNEQI 128

Query: 328 IVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRI 362
           +++AG++L +N +L++ +++   T H+++ P+ ++
Sbjct: 129 LMYAGQQLEDNQLLSQCDLRNDQTFHVLVCPNDKL 163


>gi|323453810|gb|EGB09681.1| polyubiquitin, partial [Aureococcus anophagefferens]
          Length = 134

 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 52/129 (40%), Positives = 76/129 (58%), Gaps = 3/129 (2%)

Query: 225 VRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV--- 281
           + L+VE    + +VK+ + +   +    Q L +AG +LE  +TL+ Y I+    L +   
Sbjct: 6   ITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 65

Query: 282 LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVL 341
           L    QIFVKT  GKTITLDV+P +T+ +VK K+ DK   P   Q ++FAGK+L +   L
Sbjct: 66  LRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTL 125

Query: 342 ARYNIQKHS 350
           + YNIQK S
Sbjct: 126 SDYNIQKES 134



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 52/135 (38%), Positives = 80/135 (59%), Gaps = 2/135 (1%)

Query: 70  TNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESI 129
           T +T T+ +  P  T+ N+K  IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES 
Sbjct: 2   TGKTITL-DVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKEST 59

Query: 130 IHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKL 189
           +HLV   +  + IFVK  TG+ + L+V+ S  I +VK  +    G+      +I+ GK+L
Sbjct: 60  LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQL 119

Query: 190 EDSKTLAFYDMKDEC 204
           ED +TL+ Y+++ E 
Sbjct: 120 EDGRTLSDYNIQKES 134



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 57/129 (44%), Positives = 77/129 (59%), Gaps = 3/129 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 8   LDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 67

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T ++  P  T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 68  GGMQIFVKTLTGKTIT-LDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 125

Query: 120 TSMNIKSES 128
           +  NI+ ES
Sbjct: 126 SDYNIQKES 134



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 70/128 (54%), Gaps = 6/128 (4%)

Query: 295 GKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHM 354
           GKTITLDV+P +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+
Sbjct: 3   GKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 62

Query: 355 VLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDD 408
           VL     +          +I+L +  S+  +  K K Q         + L+     L+D 
Sbjct: 63  VLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDG 122

Query: 409 RTLADYGM 416
           RTL+DY +
Sbjct: 123 RTLSDYNI 130



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 72/130 (55%), Gaps = 3/130 (2%)

Query: 148 TGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLE 207
           TG+ + L+V+ S  I +VK  +    G+      +I+ GK+LED +TL+ Y+++ E  L 
Sbjct: 2   TGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 61

Query: 208 M---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEA 264
           +       +QIFV+T   + + L+VE    + +VK+ + +   +    Q L +AG +LE 
Sbjct: 62  LVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLED 121

Query: 265 CKTLASYGIK 274
            +TL+ Y I+
Sbjct: 122 GRTLSDYNIQ 131


>gi|428168160|gb|EKX37108.1| ubiquitin [Guillardia theta CCMP2712]
          Length = 199

 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 52/108 (48%), Positives = 67/108 (62%), Gaps = 3/108 (2%)

Query: 252 NQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTV 308
            Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+
Sbjct: 16  QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 75

Query: 309 QDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
             VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 76  DMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 123



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/124 (44%), Positives = 73/124 (58%), Gaps = 3/124 (2%)

Query: 12  LKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPT 70
           +K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +    M++FVK  T
Sbjct: 2   VKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLT 61

Query: 71  NQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESII 130
            +T T +E     T+  +K+ IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +
Sbjct: 62  GKTIT-LEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTL 119

Query: 131 HLVF 134
           HLV 
Sbjct: 120 HLVL 123



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 72/121 (59%), Gaps = 1/121 (0%)

Query: 88  IKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAA 147
           +K+ IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +  + IFVK  
Sbjct: 2   VKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 60

Query: 148 TGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLE 207
           TG+ + LEV+ S  I  VK+ +    G+      +I+ GK+LED +TLA Y+++ E  L 
Sbjct: 61  TGKTITLEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 120

Query: 208 M 208
           +
Sbjct: 121 L 121



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 60/122 (49%), Gaps = 6/122 (4%)

Query: 311 VKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFI 370
           VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +        
Sbjct: 2   VKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLT 61

Query: 371 DPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVL 424
             +I+L +  S+  +M K K Q         + L+     L+D RTLADY +     + L
Sbjct: 62  GKTITLEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 121

Query: 425 VF 426
           V 
Sbjct: 122 VL 123



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 3/118 (2%)

Query: 165 VKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPI 221
           VK+ +    G+      +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T  
Sbjct: 2   VKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLT 61

Query: 222 EEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
            + + LEVE    +  VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 62  GKTITLEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 119



 Score = 45.4 bits (106), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I  +K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 67  LEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 122


>gi|115482500|ref|NP_001064843.1| Os10g0475900 [Oryza sativa Japonica Group]
 gi|16905182|gb|AAL31052.1|AC078893_15 putative polyubiquitin [Oryza sativa Japonica Group]
 gi|31432659|gb|AAP54264.1| Ubiquitin family protein, expressed [Oryza sativa Japonica Group]
 gi|113639452|dbj|BAF26757.1| Os10g0475900 [Oryza sativa Japonica Group]
 gi|215678821|dbj|BAG95258.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 328

 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 151/306 (49%), Gaps = 13/306 (4%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           +K++VK+    T  V       TV  IK+ +   EGI   +  + + G  LK +   +  
Sbjct: 20  LKIYVKMMKTFTLNVNST---DTVDQIKSKLSAIEGIDKSKQEMFFAGMHLKNEDK-LAD 75

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI + S + L       +S+ +  + G+   L ++ S +I D+KA +    G+   + I
Sbjct: 76  YNIMTNSSVDLYVTDAIQISVRI-PSVGKTTKLNMRKSNSIADIKAEIEQEEGILMNEQI 134

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEMF--PSS-IQIFVRTPIEEIVRLEVEVLIVVRDV 238
           ++Y G++LED++ L+  D++++    +   P+  + +F+    E+ + LE +    V DV
Sbjct: 135 LMYAGQQLEDNQLLSQCDLRNDQTFHVLVCPNDKLHVFINVRGEKTIGLETKRWYTVADV 194

Query: 239 KEIVANIIDLSLGNQDLFY----AGTKLEACKTLASYGIKNNYVLDVLPSPFQIFVKTWG 294
           K ++ N+  L   +Q L       G  L   + L    +KNN  L +L    Q FVK+W 
Sbjct: 195 KLMIENLEGLPACSQILTRMQSGVGVALTDGRMLQDQHVKNNDTL-LLQQNVQFFVKSWE 253

Query: 295 GKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHM 354
           GKT+T+ ++  +T + +K ++ +KL+    L  +   G+ L     L  + ++ +ST+++
Sbjct: 254 GKTLTMVLKTSDTGKQIKDRIAEKLRIKESLYYLCHKGRVLLTEDTLLDHEVESNSTVYI 313

Query: 355 VLAPSS 360
            L  S+
Sbjct: 314 RLRNSA 319



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 116/224 (51%), Gaps = 9/224 (4%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLE-AGRLVDYGIRNNSTLHFLHQNL 59
           + V  ++ +  +K+ +   EGI +   ++FFAG  L+   +L DY I  NS++     + 
Sbjct: 32  LNVNSTDTVDQIKSKLSAIEGIDKSKQEMFFAGMHLKNEDKLADYNIMTNSSVDLYVTD- 90

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             +++ V+IP+    T +     +++ +IK  I+ +EGI  ++  L+Y G+ L ED   +
Sbjct: 91  -AIQISVRIPSVGKTTKLNMRKSNSIADIKAEIEQEEGILMNEQILMYAGQQL-EDNQLL 148

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  +++++   H++ CP + L +F+     + + LE K  + + DVK ++ ++ G+ A  
Sbjct: 149 SQCDLRNDQTFHVLVCPNDKLHVFINVRGEKTIGLETKRWYTVADVKLMIENLEGLPACS 208

Query: 180 HIMIYE----GKKLEDSKTLAFYDMKDECLLEMFPSSIQIFVRT 219
            I+       G  L D + L    +K+   L +   ++Q FV++
Sbjct: 209 QILTRMQSGVGVALTDGRMLQDQHVKNNDTL-LLQQNVQFFVKS 251



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 86/155 (55%), Gaps = 4/155 (2%)

Query: 210 PSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLA 269
           P S++I+V+  + +   L V     V  +K  ++ I  +    Q++F+AG  L+    LA
Sbjct: 17  PKSLKIYVK--MMKTFTLNVNSTDTVDQIKSKLSAIEGIDKSKQEMFFAGMHLKNEDKLA 74

Query: 270 SYGIKNNYVLDV-LPSPFQIFVKTWG-GKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQS 327
            Y I  N  +D+ +    QI V+    GKT  L+++  N++ D+K ++  +    ++ Q 
Sbjct: 75  DYNIMTNSSVDLYVTDAIQISVRIPSVGKTTKLNMRKSNSIADIKAEIEQEEGILMNEQI 134

Query: 328 IVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRI 362
           +++AG++L +N +L++ +++   T H+++ P+ ++
Sbjct: 135 LMYAGQQLEDNQLLSQCDLRNDQTFHVLVCPNDKL 169


>gi|156396888|ref|XP_001637624.1| predicted protein [Nematostella vectensis]
 gi|156224738|gb|EDO45561.1| predicted protein [Nematostella vectensis]
          Length = 147

 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 55/137 (40%), Positives = 82/137 (59%), Gaps = 7/137 (5%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELL 399
           IQK STLH+VL      +++ +     + +L +  S+  E  K K Q        V+ LL
Sbjct: 61  IQKESTLHLVLRLRGG-MQISVKAHWKTFTLDVEASDTVESVKEKIQNREGIPPKVQRLL 119

Query: 400 VDQVALQDDRTLADYGM 416
            ++  L D+R+LADY +
Sbjct: 120 YEEEELVDNRSLADYNI 136



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 54/148 (36%), Positives = 87/148 (58%), Gaps = 3/148 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + I VKA   +   L+V+ S  +  VK  + +  G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQISVKAH-WKTFTLDVEASDTVESVKEKIQNREGIPPKVQR 117

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEMF 209
           ++YE ++L D+++LA Y++K   +L +F
Sbjct: 118 LLYEEEELVDNRSLADYNIKQGSILHLF 145



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 82/148 (55%), Gaps = 6/148 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKT-WGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSI 328
           I+    L +   L    QI VK  W  KT TLDV+  +TV+ VK K+ ++   P  +Q +
Sbjct: 61  IQKESTLHLVLRLRGGMQISVKAHW--KTFTLDVEASDTVESVKEKIQNREGIPPKVQRL 118

Query: 329 VFAGKRLFENHVLARYNIQKHSTLHMVL 356
           ++  + L +N  LA YNI++ S LH+ L
Sbjct: 119 LYEEEELVDNRSLADYNIKQGSILHLFL 146



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/133 (39%), Positives = 75/133 (56%), Gaps = 4/133 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++ VK         VEA    TV+++K  IQ +EGI      L+Y+ + L  D  ++
Sbjct: 75  GGMQISVKAHWKTFTLDVEA--SDTVESVKEKIQNREGIPPKVQRLLYEEEELV-DNRSL 131

Query: 120 TSMNIKSESIIHL 132
              NIK  SI+HL
Sbjct: 132 ADYNIKQGSILHL 144



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 73/143 (51%), Gaps = 4/143 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QI V+   +    L+VE    V  VKE + N   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQISVKAHWKTFT-LDVEASDTVESVKEKIQNREGIPPKVQRLL 119

Query: 257 YAGTKLEACKTLASYGIKNNYVL 279
           Y   +L   ++LA Y IK   +L
Sbjct: 120 YEEEELVDNRSLADYNIKQGSIL 142


>gi|125532351|gb|EAY78916.1| hypothetical protein OsI_34017 [Oryza sativa Indica Group]
          Length = 322

 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 142/284 (50%), Gaps = 10/284 (3%)

Query: 84  TVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIF 143
           TV  IK+ +   EGI   +  + + G  LK +   +   NI + S + L       +S+ 
Sbjct: 33  TVDQIKSKLSAIEGIDKSKQEMFFAGMHLK-NKDKLADYNIMTNSSVDLYVTDAIQISVR 91

Query: 144 VKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDE 203
           +  + G+   L ++ S +I D+KA +    G+   + I++Y G++LED++ L+  D++++
Sbjct: 92  I-PSVGKTTKLNMRKSNSIADIKAEIEQEEGILMNEQILMYAGQQLEDNQLLSQCDLRND 150

Query: 204 CLLEMF--PSS-IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFY--- 257
               +   P+  + +F+    E+ + LE +    V DVK ++ N+  L   +Q L     
Sbjct: 151 QTFHVLVCPNDKLHVFINVRGEKTIGLEAKRWYTVADVKLMIENLEGLPACSQILTRMQS 210

Query: 258 -AGTKLEACKTLASYGIKNNYVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLF 316
             G  L   + L    +KNN  L +L    Q FVK+W GKT+T+ ++  +T + +K ++ 
Sbjct: 211 GVGVALTDGRMLQDQHVKNNDTL-LLQQNVQFFVKSWEGKTLTMVLKTSDTGKQIKDRIA 269

Query: 317 DKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSS 360
           +KL+    L  +   G+ L     L  + ++ +ST+++ L  S+
Sbjct: 270 EKLRIKESLYYLCHKGRVLLTEDTLLDHEVESNSTVYIRLRNSA 313



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 116/224 (51%), Gaps = 9/224 (4%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLE-AGRLVDYGIRNNSTLHFLHQNL 59
           + V  ++ +  +K+ +   EGI +   ++FFAG  L+   +L DY I  NS++     + 
Sbjct: 26  LNVNGTDTVDQIKSKLSAIEGIDKSKQEMFFAGMHLKNKDKLADYNIMTNSSVDLYVTD- 84

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             +++ V+IP+    T +     +++ +IK  I+ +EGI  ++  L+Y G+ L ED   +
Sbjct: 85  -AIQISVRIPSVGKTTKLNMRKSNSIADIKAEIEQEEGILMNEQILMYAGQQL-EDNQLL 142

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  +++++   H++ CP + L +F+     + + LE K  + + DVK ++ ++ G+ A  
Sbjct: 143 SQCDLRNDQTFHVLVCPNDKLHVFINVRGEKTIGLEAKRWYTVADVKLMIENLEGLPACS 202

Query: 180 HIMIYE----GKKLEDSKTLAFYDMKDECLLEMFPSSIQIFVRT 219
            I+       G  L D + L    +K+   L +   ++Q FV++
Sbjct: 203 QILTRMQSGVGVALTDGRMLQDQHVKNNDTL-LLQQNVQFFVKS 245



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 86/155 (55%), Gaps = 4/155 (2%)

Query: 210 PSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLA 269
           P S++I+V+  + +   L V     V  +K  ++ I  +    Q++F+AG  L+    LA
Sbjct: 11  PKSLKIYVK--MMKTFTLNVNGTDTVDQIKSKLSAIEGIDKSKQEMFFAGMHLKNKDKLA 68

Query: 270 SYGIKNNYVLDV-LPSPFQIFVKTWG-GKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQS 327
            Y I  N  +D+ +    QI V+    GKT  L+++  N++ D+K ++  +    ++ Q 
Sbjct: 69  DYNIMTNSSVDLYVTDAIQISVRIPSVGKTTKLNMRKSNSIADIKAEIEQEEGILMNEQI 128

Query: 328 IVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRI 362
           +++AG++L +N +L++ +++   T H+++ P+ ++
Sbjct: 129 LMYAGQQLEDNQLLSQCDLRNDQTFHVLVCPNDKL 163


>gi|387604502|gb|AFJ93197.1| ubiquitin, partial [Eremosparton songoricum]
          Length = 142

 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 81/143 (56%), Gaps = 2/143 (1%)

Query: 42  VDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSD 101
           +DY I+  STLH + +    M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  D
Sbjct: 1   IDYNIQRESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPD 59

Query: 102 QFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFA 161
           Q  L++ GK L ED  T+   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  
Sbjct: 60  QQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 118

Query: 162 IRDVKAIVGSVVGVSAADHIMIY 184
           I +VK  +    G+      +I+
Sbjct: 119 IDNVKTKIQDKEGIPPDQQRLIF 141



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/108 (44%), Positives = 66/108 (61%), Gaps = 2/108 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 35  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 94

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVY 107
             M++FVK  T +T T +E     T+ N+KT IQ KEGI  DQ  L++
Sbjct: 95  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKTKIQDKEGIPPDQQRLIF 141



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/111 (41%), Positives = 63/111 (56%)

Query: 282 LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVL 341
           L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L
Sbjct: 17  LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTL 76

Query: 342 ARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ 392
           A YNIQK STLH+VL     +          +I+L +  S+  +  K K Q
Sbjct: 77  ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQ 127



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 76/140 (54%), Gaps = 6/140 (4%)

Query: 198 YDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQD 254
           Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q 
Sbjct: 3   YNIQRESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 62

Query: 255 LFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDV 311
           L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +V
Sbjct: 63  LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 122

Query: 312 KVKLFDKLQTPLHLQSIVFA 331
           K K+ DK   P   Q ++FA
Sbjct: 123 KTKIQDKEGIPPDQQRLIFA 142



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 76/139 (54%), Gaps = 3/139 (2%)

Query: 123 NIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIM 182
           NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      +
Sbjct: 4   NIQRESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 63

Query: 183 IYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVK 239
           I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +VK
Sbjct: 64  IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 123

Query: 240 EIVANIIDLSLGNQDLFYA 258
             + +   +    Q L +A
Sbjct: 124 TKIQDKEGIPPDQQRLIFA 142


>gi|223942441|gb|ACN25304.1| unknown [Zea mays]
 gi|414871092|tpg|DAA49649.1| TPA: putative ubiquitin family protein [Zea mays]
          Length = 314

 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 138/287 (48%), Gaps = 10/287 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEA-GRLVDYGIRNNSTLHFLHQNL 59
           + VK ++ I  +K+ I   EGI     +LFFAG  LE   RL DY I  NS +     + 
Sbjct: 23  LDVKSTDTIDQIKSKIGALEGIDNSQQELFFAGSHLEKDNRLADYNIMTNSCVDLYVTD- 81

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++ V IP+      +  M   +V ++K MI+   GI  D+  L++  + L ED   +
Sbjct: 82  -GMQISVSIPSVWKTIKLNVMKSQSVADVKAMIEQMGGIPLDEQILMHGCQKL-EDNKLL 139

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +   + +   +H++  P + L I V     E +NL+VK  + + DVK ++ ++ G+ A  
Sbjct: 140 SQCGLSNGHTLHVLVRPTDRLHISVDVDGEETLNLDVKSWYTVADVKLMIDTLEGLPART 199

Query: 180 HIMIY-----EGKKLEDSKTLAFYDMKDECLLEMFPSSIQIFVRTPIEEIVRLEVEVLIV 234
            I+++         L+D +TL    +K+  ++ ++   +  FV+T     + L +     
Sbjct: 200 QILMHTQPGGANTVLKDIETLQNQGIKNNDIVALY-HKVNFFVKTYEGRNLVLSMRTCDT 258

Query: 235 VRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV 281
             ++ +++   + ++ G   L Y G  L    TL  + I+NN  +DV
Sbjct: 259 AEEIMKVIEEKLKVNTGVYYLHYRGRVLALGDTLRKHKIENNCTVDV 305



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 141/284 (49%), Gaps = 11/284 (3%)

Query: 84  TVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIF 143
           T+  IK+ I   EGI + Q  L + G  L++D   +   NI + S + L       +S+ 
Sbjct: 30  TIDQIKSKIGALEGIDNSQQELFFAGSHLEKDNR-LADYNIMTNSCVDLYVTDGMQISVS 88

Query: 144 VKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDE 203
           +  +  + + L V  S ++ DVKA++  + G+   + I+++  +KLED+K L+   + + 
Sbjct: 89  I-PSVWKTIKLNVMKSQSVADVKAMIEQMGGIPLDEQILMHGCQKLEDNKLLSQCGLSNG 147

Query: 204 CLLEMF--PSS-IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFY--- 257
             L +   P+  + I V    EE + L+V+    V DVK ++  +  L    Q L +   
Sbjct: 148 HTLHVLVRPTDRLHISVDVDGEETLNLDVKSWYTVADVKLMIDTLEGLPARTQILMHTQP 207

Query: 258 --AGTKLEACKTLASYGIKNNYVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKL 315
             A T L+  +TL + GIKNN ++  L      FVKT+ G+ + L ++  +T +++   +
Sbjct: 208 GGANTVLKDIETLQNQGIKNNDIV-ALYHKVNFFVKTYEGRNLVLSMRTCDTAEEIMKVI 266

Query: 316 FDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPS 359
            +KL+    +  + + G+ L     L ++ I+ + T+ + L  S
Sbjct: 267 EEKLKVNTGVYYLHYRGRVLALGDTLRKHKIENNCTVDVRLRNS 310



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 78/153 (50%), Gaps = 8/153 (5%)

Query: 214 QIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGI 273
           +I++R  + + V L+V+    +  +K  +  +  +    Q+LF+AG+ LE    LA Y I
Sbjct: 12  KIYIR--MMKTVLLDVKSTDTIDQIKSKIGALEGIDNSQQELFFAGSHLEKDNRLADYNI 69

Query: 274 KNNYVLDV-LPSPFQIFVK---TWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
             N  +D+ +    QI V     W  KTI L+V    +V DVK  +      PL  Q ++
Sbjct: 70  MTNSCVDLYVTDGMQISVSIPSVW--KTIKLNVMKSQSVADVKAMIEQMGGIPLDEQILM 127

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRI 362
              ++L +N +L++  +    TLH+++ P+ R+
Sbjct: 128 HGCQKLEDNKLLSQCGLSNGHTLHVLVRPTDRL 160


>gi|111140007|gb|ABH06365.1| ubiquitin [Sorbus aucuparia]
          Length = 141

 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 80/143 (55%), Gaps = 2/143 (1%)

Query: 44  YGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQF 103
           Y I+  STLH + +    M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ 
Sbjct: 1   YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQ 59

Query: 104 TLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIR 163
            L++ GK L ED  T+   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I 
Sbjct: 60  RLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 118

Query: 164 DVKAIVGSVVGVSAADHIMIYEG 186
           +VKA +    G+      +I+ G
Sbjct: 119 NVKAKIQDKEGIPPDQQRLIFAG 141



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 49/140 (35%), Positives = 77/140 (55%), Gaps = 3/140 (2%)

Query: 123 NIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIM 182
           NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      +
Sbjct: 2   NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 61

Query: 183 IYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVK 239
           I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +VK
Sbjct: 62  IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 121

Query: 240 EIVANIIDLSLGNQDLFYAG 259
             + +   +    Q L +AG
Sbjct: 122 AKIQDKEGIPPDQQRLIFAG 141



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/110 (44%), Positives = 66/110 (60%), Gaps = 2/110 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 33  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 92

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDG 109
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ G
Sbjct: 93  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG 141



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/141 (36%), Positives = 77/141 (54%), Gaps = 6/141 (4%)

Query: 198 YDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQD 254
           Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q 
Sbjct: 1   YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 60

Query: 255 LFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDV 311
           L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +V
Sbjct: 61  LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 120

Query: 312 KVKLFDKLQTPLHLQSIVFAG 332
           K K+ DK   P   Q ++FAG
Sbjct: 121 KAKIQDKEGIPPDQQRLIFAG 141



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/111 (41%), Positives = 63/111 (56%)

Query: 282 LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVL 341
           L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L
Sbjct: 15  LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 74

Query: 342 ARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ 392
           A YNIQK STLH+VL     +          +I+L +  S+  +  K K Q
Sbjct: 75  ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 125



 Score = 38.1 bits (87), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 6/89 (6%)

Query: 344 YNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKE 397
           YNIQK STLH+VL     +          +I+L +  S+  +  K K Q         + 
Sbjct: 1   YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 60

Query: 398 LLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           L+     L+D RTLADY +     + LV 
Sbjct: 61  LIFAGKQLEDGRTLADYNIQKESTLHLVL 89


>gi|449533510|ref|XP_004173717.1| PREDICTED: polyubiquitin-like, partial [Cucumis sativus]
          Length = 126

 Score = 90.5 bits (223), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 52/107 (48%), Positives = 68/107 (63%), Gaps = 3/107 (2%)

Query: 253 QDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQ 309
           Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ 
Sbjct: 14  QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 73

Query: 310 DVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 74  NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 120



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 54/117 (46%), Positives = 69/117 (58%), Gaps = 3/117 (2%)

Query: 19  KEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVV 77
           KEGI  D   L FAG +LE GR L DY I+  STLH + +    M++FVK  T +T T+ 
Sbjct: 6   KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL- 64

Query: 78  EAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVF 134
           E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV 
Sbjct: 65  EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVL 120



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 47/114 (41%), Positives = 68/114 (59%), Gaps = 1/114 (0%)

Query: 95  KEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNL 154
           KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +  + IFVK  TG+ + L
Sbjct: 6   KEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL 64

Query: 155 EVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
           EV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 65  EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 118



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 36/112 (32%), Positives = 60/112 (53%), Gaps = 3/112 (2%)

Query: 174 GVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVE 230
           G+      +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE
Sbjct: 8   GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 67

Query: 231 VLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVL 282
               + +VK  + +   +    Q L +AG +LE  +TLA Y I+    L ++
Sbjct: 68  SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 119



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 39/116 (33%), Positives = 55/116 (47%), Gaps = 6/116 (5%)

Query: 317 DKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISL 376
           DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +I+L
Sbjct: 5   DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL 64

Query: 377 SISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
            +  S+  +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 65  EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 120



 Score = 50.1 bits (118), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 64  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 119


>gi|84796035|gb|ABC66105.1| putative pentameric polyubiquitin [Zinnia violacea]
          Length = 122

 Score = 90.5 bits (223), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 52/107 (48%), Positives = 68/107 (63%), Gaps = 3/107 (2%)

Query: 253 QDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQ 309
           Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ 
Sbjct: 10  QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 69

Query: 310 DVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 70  NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 116



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 54/117 (46%), Positives = 69/117 (58%), Gaps = 3/117 (2%)

Query: 19  KEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVV 77
           KEGI  D   L FAG +LE GR L DY I+  STLH + +    M++FVK  T +T T+ 
Sbjct: 2   KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL- 60

Query: 78  EAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVF 134
           E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV 
Sbjct: 61  EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVL 116



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 47/114 (41%), Positives = 68/114 (59%), Gaps = 1/114 (0%)

Query: 95  KEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNL 154
           KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +  + IFVK  TG+ + L
Sbjct: 2   KEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL 60

Query: 155 EVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
           EV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 61  EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 114



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 36/112 (32%), Positives = 60/112 (53%), Gaps = 3/112 (2%)

Query: 174 GVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVE 230
           G+      +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE
Sbjct: 4   GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 63

Query: 231 VLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVL 282
               + +VK  + +   +    Q L +AG +LE  +TLA Y I+    L ++
Sbjct: 64  SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 115



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 39/116 (33%), Positives = 55/116 (47%), Gaps = 6/116 (5%)

Query: 317 DKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISL 376
           DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +I+L
Sbjct: 1   DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL 60

Query: 377 SISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
            +  S+  +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 61  EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 116



 Score = 50.1 bits (118), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 60  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 115


>gi|284444065|gb|ADB85771.1| polyubiquitin-like protein [Wolffia arrhiza]
          Length = 114

 Score = 90.5 bits (223), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 52/107 (48%), Positives = 68/107 (63%), Gaps = 3/107 (2%)

Query: 253 QDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQ 309
           Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ 
Sbjct: 2   QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 61

Query: 310 DVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 62  NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 108



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 49/107 (45%), Positives = 64/107 (59%), Gaps = 3/107 (2%)

Query: 29  LFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQN 87
           L FAG +LE GR L DY I+  STLH + +    M++FVK  T +T T+ E     T+ N
Sbjct: 4   LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDN 62

Query: 88  IKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVF 134
           +K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV 
Sbjct: 63  VKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVL 108



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 42/107 (39%), Positives = 63/107 (58%), Gaps = 1/107 (0%)

Query: 102 QFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFA 161
           Q  L++ GK L ED  T+   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  
Sbjct: 1   QQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 59

Query: 162 IRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
           I +VKA +    G+      +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 60  IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 106



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/104 (33%), Positives = 58/104 (55%), Gaps = 3/104 (2%)

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 4   LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 63

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVL 282
           K  + +   +    Q L +AG +LE  +TLA Y I+    L ++
Sbjct: 64  KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 107



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 6/107 (5%)

Query: 326 QSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKE 385
           Q ++FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +
Sbjct: 2   QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 61

Query: 386 MAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
             K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 62  NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 108



 Score = 49.7 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 52  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 107


>gi|323308175|gb|EGA61425.1| Ubi4p [Saccharomyces cerevisiae FostersO]
          Length = 131

 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/127 (42%), Positives = 77/127 (60%), Gaps = 2/127 (1%)

Query: 41  LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQS 100
           L DY I+  STLH + +    M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  
Sbjct: 3   LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPP 61

Query: 101 DQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSF 160
           DQ  L++ GK L ED  T++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S 
Sbjct: 62  DQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD 120

Query: 161 AIRDVKA 167
            I +VK+
Sbjct: 121 TIDNVKS 127



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 44/94 (46%), Positives = 60/94 (63%), Gaps = 3/94 (3%)

Query: 266 KTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTP 322
           +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P
Sbjct: 1   RTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIP 60

Query: 323 LHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
              Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 61  PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 94



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 72/125 (57%), Gaps = 3/125 (2%)

Query: 118 TMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSA 177
           T++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+  
Sbjct: 2   TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPP 61

Query: 178 ADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIV 234
               +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    
Sbjct: 62  DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 121

Query: 235 VRDVK 239
           + +VK
Sbjct: 122 IDNVK 126



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 71/128 (55%), Gaps = 6/128 (4%)

Query: 193 KTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLS 249
           +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   + 
Sbjct: 1   RTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIP 60

Query: 250 LGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYN 306
              Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +
Sbjct: 61  PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD 120

Query: 307 TVQDVKVK 314
           T+ +VK K
Sbjct: 121 TIDNVKSK 128



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 55/91 (60%), Gaps = 2/91 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 38  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 97

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKT 90
             M++FVK  T +T T +E     T+ N+K+
Sbjct: 98  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKS 127



 Score = 38.1 bits (87), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 6/94 (6%)

Query: 339 HVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA---- 394
             L+ YNIQK STLH+VL     +          +I+L +  S+  +  K K Q      
Sbjct: 1   RTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIP 60

Query: 395 --VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
              + L+     L+D RTL+DY +     + LV 
Sbjct: 61  PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 94


>gi|403284848|ref|XP_003933764.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like isoform 4
           [Saimiri boliviensis boliviensis]
          Length = 121

 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 54/116 (46%), Positives = 72/116 (62%), Gaps = 3/116 (2%)

Query: 20  EGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVE 78
           EGI  D   L FA  +LE GR L DY I+  STLH + +    M++FVK  T++T T+ E
Sbjct: 2   EGIPPDQQRLIFARKQLEDGRNLSDYNIQKESTLHLILRLRGGMQIFVKTLTSKTITL-E 60

Query: 79  AMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVF 134
             P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++  NI+ ESI+HLV 
Sbjct: 61  VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESILHLVL 115



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 3/107 (2%)

Query: 253 QDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQ 309
           Q L +A  +LE  + L+ Y I+    L +   L    QIFVKT   KTITL+V+P +T++
Sbjct: 9   QRLIFARKQLEDGRNLSDYNIQKESTLHLILRLRGGMQIFVKTLTSKTITLEVEPSDTIE 68

Query: 310 DVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK S LH+VL
Sbjct: 69  NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESILHLVL 115



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 66/113 (58%), Gaps = 1/113 (0%)

Query: 96  EGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLE 155
           EGI  DQ  L++  K L ED   ++  NI+ ES +HL+   +  + IFVK  T + + LE
Sbjct: 2   EGIPPDQQRLIFARKQL-EDGRNLSDYNIQKESTLHLILRLRGGMQIFVKTLTSKTITLE 60

Query: 156 VKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
           V+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+++ E +L +
Sbjct: 61  VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESILHL 113



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 3/109 (2%)

Query: 174 GVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVE 230
           G+      +I+  K+LED + L+ Y+++ E  L +       +QIFV+T   + + LEVE
Sbjct: 3   GIPPDQQRLIFARKQLEDGRNLSDYNIQKESTLHLILRLRGGMQIFVKTLTSKTITLEVE 62

Query: 231 VLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
               + +VK  + +   +    Q L +AG +LE  +TL+ Y I+   +L
Sbjct: 63  PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESIL 111



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  S LH +
Sbjct: 59  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESILHLV 114



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 6/101 (5%)

Query: 322 PLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISIS 381
           P   Q ++FA K+L +   L+ YNIQK STLH++L     +          +I+L +  S
Sbjct: 5   PPDQQRLIFARKQLEDGRNLSDYNIQKESTLHLILRLRGGMQIFVKTLTSKTITLEVEPS 64

Query: 382 EVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGM 416
           +  E  K K Q         + L+     L+D RTL+DY +
Sbjct: 65  DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 105


>gi|397627957|gb|EJK68681.1| hypothetical protein THAOC_10112 [Thalassiosira oceanica]
          Length = 207

 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 54/142 (38%), Positives = 81/142 (57%), Gaps = 11/142 (7%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITLDV+P +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPL-IFIDPSISLSISISEVKEMAKVKFQAAVKELLVDQVA 404
           IQK STLH+VL       ++P  IF DP+I     + E+K+ +     A +++ +V    
Sbjct: 61  IQKESTLHLVLRLRGGHCQVPCGIFDDPAI-----VEEIKQAS-----ATIRKSMVQSND 110

Query: 405 LQDDRTLADYGMDLSEKVVLVF 426
           L      A+   +L++ +  V 
Sbjct: 111 LHTGLGAANSAQELNQMIRWVM 132



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/73 (46%), Positives = 47/73 (64%), Gaps = 2/73 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +  P  T+ N+KT IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-DVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVF 134
            NI+ ES +HLV 
Sbjct: 59  YNIQKESTLHLVL 71



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 34/56 (60%), Gaps = 1/56 (1%)

Query: 1  MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
          + V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 15 LDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 41/69 (59%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + L+V+ S  I +VK  +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM 208
           ++ E  L +
Sbjct: 61  IQKESTLHL 69


>gi|281210011|gb|EFA84179.1| ubiquitin [Polysphondylium pallidum PN500]
          Length = 155

 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 83/143 (58%), Gaps = 2/143 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     +++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEGSDSIENVKIKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI  ES +HLV   +  + +FV+   G+I+ LEV+ S  I +VKA V   +G       
Sbjct: 59  YNILKESTLHLVLRLRGGMQVFVETLNGKIITLEVEESDTIENVKAKVTEKLGYPPTQQN 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDEC 204
           +I   KKLE+ +TL  Y+++ E 
Sbjct: 119 LICNKKKLENGRTLFDYNIQKES 141



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 50/147 (34%), Positives = 82/147 (55%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +++++VK+K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEGSDSIENVKIKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRI------IELPLIFIDPSISLSISISEVKEMAKVKFQAAVKELL 399
           I K STLH+VL     +      +   +I ++   S +I   + K   K+ +    + L+
Sbjct: 61  ILKESTLHLVLRLRGGMQVFVETLNGKIITLEVEESDTIENVKAKVTEKLGYPPTQQNLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
            ++  L++ RTL DY +    K+ L  
Sbjct: 121 CNKKKLENGRTLFDYNIQKESKIYLTL 147



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/147 (34%), Positives = 82/147 (55%), Gaps = 3/147 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEGSDSIENVKIKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I     L +   L    Q+FV+T  GK ITL+V+  +T+++VK K+ +KL  P   Q+++
Sbjct: 61  ILKESTLHLVLRLRGGMQVFVETLNGKIITLEVEESDTIENVKAKVTEKLGYPPTQQNLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL 356
              K+L     L  YNIQK S +++ L
Sbjct: 121 CNKKKLENGRTLFDYNIQKESKIYLTL 147



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 72/138 (52%), Gaps = 3/138 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S +I +VK  +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEGSDSIENVKIKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           +  E  L +       +Q+FV T   +I+ LEVE    + +VK  V   +      Q+L 
Sbjct: 61  ILKESTLHLVLRLRGGMQVFVETLNGKIITLEVEESDTIENVKAKVTEKLGYPPTQQNLI 120

Query: 257 YAGTKLEACKTLASYGIK 274
               KLE  +TL  Y I+
Sbjct: 121 CNKKKLENGRTLFDYNIQ 138



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 72/135 (53%), Gaps = 3/135 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I   STLH + +  
Sbjct: 15  LEVEGSDSIENVKIKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNILKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FV+   N     +E     T++N+K  +  K G    Q  L+ + K L E+  T+
Sbjct: 75  GGMQVFVET-LNGKIITLEVEESDTIENVKAKVTEKLGYPPTQQNLICNKKKL-ENGRTL 132

Query: 120 TSMNIKSESIIHLVF 134
              NI+ ES I+L  
Sbjct: 133 FDYNIQKESKIYLTL 147


>gi|326522440|dbj|BAK07682.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 293

 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 114/223 (51%), Gaps = 17/223 (7%)

Query: 142 IFVKAATGEIVNLEVKH-SFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDM 200
           IFVK   G  + L   H S  +  +KA +          + ++ +G +LED++TLA Y +
Sbjct: 73  IFVKNPAGRKICLRGVHLSDTVYTIKAKI-------QERYRLVLDGVQLEDNRTLADYGV 125

Query: 201 KDECLLEMFPSSIQIFVRTPIE-EIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAG 259
           + +  L++    +QIFV   +E   + LEV+ L  +  VK  + +I       Q L +A 
Sbjct: 126 QHDSTLDL-QEKMQIFVMETLEGRTITLEVDSLDTIDKVKAKIEDIEGFPKVQQCLIFAN 184

Query: 260 TKLEACK-TLASYGIKNNYVLDVLPSP------FQIFVKTWGGKTITLDVQPYNTVQDVK 312
            +L+  K TL  + I     L ++  P       ++F+K W G T+TL V   +T+  VK
Sbjct: 185 KQLDDGKLTLEDHNIGKGSTLLLILLPCNPTVVMELFIKMWRGNTLTLKVGRSDTIGSVK 244

Query: 313 VKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           VK+++    P   Q ++FAG +L ++  LA Y IQ+ ST+H+ 
Sbjct: 245 VKIYEHDGIPPRQQRLIFAGTQLEDHRTLADYKIQQESTIHLA 287



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 108/217 (49%), Gaps = 20/217 (9%)

Query: 210 PSSIQIFVRTPIEEIVRLE-VEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTL 268
           PS + IFV+ P    + L  V +   V  +K  +     L L        G +LE  +TL
Sbjct: 68  PSKVHIFVKNPAGRKICLRGVHLSDTVYTIKAKIQERYRLVL-------DGVQLEDNRTL 120

Query: 269 ASYGIKNNYVLDVLPSPFQIFV-KTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQS 327
           A YG++++  LD L    QIFV +T  G+TITL+V   +T+  VK K+ D    P   Q 
Sbjct: 121 ADYGVQHDSTLD-LQEKMQIFVMETLEGRTITLEVDSLDTIDKVKAKIEDIEGFPKVQQC 179

Query: 328 IVFAGKRLFENHV-LARYNIQKHSTLHMVLAPSSRIIELPL---IFIDPSISLSISISEV 383
           ++FA K+L +  + L  +NI K STL ++L P +  + + L   ++   +++L +  S+ 
Sbjct: 180 LIFANKQLDDGKLTLEDHNIGKGSTLLLILLPCNPTVVMELFIKMWRGNTLTLKVGRSDT 239

Query: 384 KEMAKVKF------QAAVKELLVDQVALQDDRTLADY 414
               KVK           + L+     L+D RTLADY
Sbjct: 240 IGSVKVKIYEHDGIPPRQQRLIFAGTQLEDHRTLADY 276



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 85/184 (46%), Gaps = 8/184 (4%)

Query: 29  LFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQN 87
           L   G +LE  R L DYG++++STL    +    M++FV          +E     T+  
Sbjct: 107 LVLDGVQLEDNRTLADYGVQHDSTLDLQEK----MQIFVMETLEGRTITLEVDSLDTIDK 162

Query: 88  IKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKE---ILSIFV 144
           +K  I+  EG    Q  L++  K L +   T+   NI   S + L+  P     ++ +F+
Sbjct: 163 VKAKIEDIEGFPKVQQCLIFANKQLDDGKLTLEDHNIGKGSTLLLILLPCNPTVVMELFI 222

Query: 145 KAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDEC 204
           K   G  + L+V  S  I  VK  +    G+      +I+ G +LED +TLA Y ++ E 
Sbjct: 223 KMWRGNTLTLKVGRSDTIGSVKVKIYEHDGIPPRQQRLIFAGTQLEDHRTLADYKIQQES 282

Query: 205 LLEM 208
            + +
Sbjct: 283 TIHL 286



 Score = 42.0 bits (97), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 7/138 (5%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGRLV--DYGIRNNSTLHFLHQN 58
           ++V   + I  +KA I   EG  +    L FA  +L+ G+L   D+ I   STL  +   
Sbjct: 152 LEVDSLDTIDKVKAKIEDIEGFPKVQQCLIFANKQLDDGKLTLEDHNIGKGSTLLLILLP 211

Query: 59  LSE---MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKED 115
            +    M+LF+K+    T T ++     T+ ++K  I   +GI   Q  L++ G  L ED
Sbjct: 212 CNPTVVMELFIKMWRGNTLT-LKVGRSDTIGSVKVKIYEHDGIPPRQQRLIFAGTQL-ED 269

Query: 116 TATMTSMNIKSESIIHLV 133
             T+    I+ ES IHL 
Sbjct: 270 HRTLADYKIQQESTIHLA 287


>gi|773585|emb|CAA35578.1| ubiquitin [Tetrahymena pyriformis]
          Length = 116

 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 48/107 (44%), Positives = 66/107 (61%), Gaps = 3/107 (2%)

Query: 253 QDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQ 309
           Q L +AG +LE  +T++ Y I+    L +   L    QIFVKT  GKTITLDV   + ++
Sbjct: 6   QRLIFAGKQLEDGRTVSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVNSTDNIE 65

Query: 310 DVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           +VK K+ DK   P   Q ++FAGK+L +   +A YNI K STLH+VL
Sbjct: 66  NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRSIADYNISKESTLHLVL 112



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 65/114 (57%), Gaps = 3/114 (2%)

Query: 22  ISEDICDLFFAGDRLEAGRLV-DYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAM 80
           I  D   L FAG +LE GR V DY I+  STLH + +    M++FVK  T +T T+ +  
Sbjct: 1   IPPDQQRLIFAGKQLEDGRTVSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL-DVN 59

Query: 81  PYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVF 134
               ++N+K  IQ KEGI  DQ  L++ GK L ED  ++   NI  ES +HLV 
Sbjct: 60  STDNIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRSIADYNISKESTLHLVL 112



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 64/111 (57%), Gaps = 1/111 (0%)

Query: 98  IQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVK 157
           I  DQ  L++ GK L ED  T++  NI+ ES +HLV   +  + IFVK  TG+ + L+V 
Sbjct: 1   IPPDQQRLIFAGKQL-EDGRTVSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVN 59

Query: 158 HSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
            +  I +VKA +    G+      +I+ GK+LED +++A Y++  E  L +
Sbjct: 60  STDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRSIADYNISKESTLHL 110



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 3/101 (2%)

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +T++ Y+++ E  L +       +QIFV+T   + + L+V     + +V
Sbjct: 8   LIFAGKQLEDGRTVSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVNSTDNIENV 67

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +++A Y I     L
Sbjct: 68  KAKIQDKEGIPPDQQRLIFAGKQLEDGRSIADYNISKESTL 108



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 6/111 (5%)

Query: 322 PLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISIS 381
           P   Q ++FAGK+L +   ++ YNIQK STLH+VL     +          +I+L ++ +
Sbjct: 2   PPDQQRLIFAGKQLEDGRTVSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVNST 61

Query: 382 EVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           +  E  K K Q         + L+     L+D R++ADY +     + LV 
Sbjct: 62  DNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRSIADYNISKESTLHLVL 112



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           + V  ++ I+N+KA I  KEGI  D   L FAG +LE GR + DY I   STLH +
Sbjct: 56  LDVNSTDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRSIADYNISKESTLHLV 111


>gi|219127007|ref|XP_002183736.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217404973|gb|EEC44918.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 205

 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 46/90 (51%), Positives = 60/90 (66%), Gaps = 1/90 (1%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITLDV+P +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPL-IFIDPSI 374
           IQK STLH+VL       ++P  IF DP+I
Sbjct: 61  IQKESTLHLVLRLRGGHCQVPCGIFDDPAI 90



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/73 (46%), Positives = 47/73 (64%), Gaps = 2/73 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +  P  T+ N+KT IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-DVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVF 134
            NI+ ES +HLV 
Sbjct: 59  YNIQKESTLHLVL 71



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 34/56 (60%), Gaps = 1/56 (1%)

Query: 1  MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
          + V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 15 LDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 41/69 (59%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + L+V+ S  I +VK  +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM 208
           ++ E  L +
Sbjct: 61  IQKESTLHL 69


>gi|168036269|ref|XP_001770630.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|81230136|dbj|BAE48267.1| putative polyubiquitin [Physcomitrella patens]
 gi|81230138|dbj|BAE48268.1| putative polyubiquitin [Physcomitrella patens]
 gi|162678151|gb|EDQ64613.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 153

 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 85/148 (57%), Gaps = 3/148 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    +++VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDSIQNVKTKIQDKEGIPPDQQRLIFAGKQLEDERTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L     I VKT  GK I +D++PY+T++ +K ++ +K   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPYDTIERIKERVEEKEGIPPVQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLA 357
           FAGK++ ++     YNI+  S LH+VLA
Sbjct: 121 FAGKQMNDDKTAKDYNIEGGSVLHLVLA 148



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 52/138 (37%), Positives = 76/138 (55%), Gaps = 6/138 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +++Q+VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDSIQNVKTKIQDKEGIPPDQQRLIFAGKQLEDERTLADYN 60

Query: 346 IQKHSTLHMVLAPSS----RIIELPLIFIDPSISLSISISEVKEMAKVK--FQAAVKELL 399
           IQK STLH+VL        ++  L    I+  I    +I  +KE  + K       + L+
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPYDTIERIKERVEEKEGIPPVQQRLI 120

Query: 400 VDQVALQDDRTLADYGMD 417
                + DD+T  DY ++
Sbjct: 121 FAGKQMNDDKTAKDYNIE 138



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/147 (34%), Positives = 81/147 (55%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     ++QN+KT IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDSIQNVKTKIQDKEGIPPDQQRLIFAGKQL-EDERTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +    I VK  TG+ + ++++    I  +K  V    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPYDTIERIKERVEEKEGIPPVQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK++ D KT   Y+++   +L +
Sbjct: 119 LIFAGKQMNDDKTAKDYNIEGGSVLHL 145



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/136 (36%), Positives = 75/136 (55%), Gaps = 3/136 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE  R L DY I+  STLH + +  
Sbjct: 15  LEVESSDSIQNVKTKIQDKEGIPPDQQRLIFAGKQLEDERTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
               + VK  T +    ++  PY T++ IK  ++ KEGI   Q  L++ GK + +D  T 
Sbjct: 75  GGTMIKVKTLTGKEIE-IDIEPYDTIERIKERVEEKEGIPPVQQRLIFAGKQMNDD-KTA 132

Query: 120 TSMNIKSESIIHLVFC 135
              NI+  S++HLV  
Sbjct: 133 KDYNIEGGSVLHLVLA 148



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 3/143 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S +I++VK  +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDSIQNVKTKIQDKEGIPPDQQRLIFAGKQLEDERTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +         I V+T   + + +++E    +  +KE V     +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPYDTIERIKERVEEKEGIPPVQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVL 279
           +AG ++   KT   Y I+   VL
Sbjct: 121 FAGKQMNDDKTAKDYNIEGGSVL 143


>gi|334361906|gb|AEG78310.1| ubiquitin, partial [Cucurbita pepo]
          Length = 141

 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/142 (38%), Positives = 80/142 (56%), Gaps = 2/142 (1%)

Query: 43  DYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQ 102
           DY I+  STL+ + +    M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ
Sbjct: 1   DYNIQRESTLNLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQ 59

Query: 103 FTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAI 162
             L++ GK L ED  T+   NI+ E+ +HLV   +  + IFVK  TG+ + LEV+ S  I
Sbjct: 60  QRLIFAGKQL-EDGRTLADYNIQKETTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 118

Query: 163 RDVKAIVGSVVGVSAADHIMIY 184
            +VKA +    G+      +I+
Sbjct: 119 DNVKAKIQDKEGIPPDQQRLIF 140



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/125 (38%), Positives = 69/125 (55%), Gaps = 3/125 (2%)

Query: 271 YGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQS 327
           Y I+    L++   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q 
Sbjct: 2   YNIQRESTLNLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 61

Query: 328 IVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMA 387
           ++FAGK+L +   LA YNIQK +TLH+VL     +          +I+L +  S+  +  
Sbjct: 62  LIFAGKQLEDGRTLADYNIQKETTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 121

Query: 388 KVKFQ 392
           K K Q
Sbjct: 122 KAKIQ 126



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 47/108 (43%), Positives = 65/108 (60%), Gaps = 2/108 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  +TLH + +  
Sbjct: 34  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKETTLHLVLRLR 93

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVY 107
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++
Sbjct: 94  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 140



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 76/140 (54%), Gaps = 6/140 (4%)

Query: 198 YDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQD 254
           Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q 
Sbjct: 2   YNIQRESTLNLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 61

Query: 255 LFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDV 311
           L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +V
Sbjct: 62  LIFAGKQLEDGRTLADYNIQKETTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 121

Query: 312 KVKLFDKLQTPLHLQSIVFA 331
           K K+ DK   P   Q ++FA
Sbjct: 122 KAKIQDKEGIPPDQQRLIFA 141



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 76/139 (54%), Gaps = 3/139 (2%)

Query: 123 NIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIM 182
           NI+ ES ++LV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      +
Sbjct: 3   NIQRESTLNLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 62

Query: 183 IYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVK 239
           I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +VK
Sbjct: 63  IFAGKQLEDGRTLADYNIQKETTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 122

Query: 240 EIVANIIDLSLGNQDLFYA 258
             + +   +    Q L +A
Sbjct: 123 AKIQDKEGIPPDQQRLIFA 141


>gi|324522667|gb|ADY48104.1| Polyubiquitin-A [Ascaris suum]
          Length = 194

 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 88/157 (56%), Gaps = 6/157 (3%)

Query: 212 SIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASY 271
           S+QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y
Sbjct: 8   SMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 67

Query: 272 GIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSI 328
            I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q +
Sbjct: 68  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 127

Query: 329 VFAGK---RLFENHVLARYNIQKHSTLHMVLAPSSRI 362
           +FAGK   RL  + + +R   + H   +++ +P S +
Sbjct: 128 IFAGKRRIRLKMSKLRSRTRKESHQISNVLSSPGSNL 164



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 51/127 (40%), Positives = 75/127 (59%), Gaps = 2/127 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 9   MQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 66

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 67  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 126

Query: 182 MIYEGKK 188
           +I+ GK+
Sbjct: 127 LIFAGKR 133



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/111 (45%), Positives = 69/111 (62%), Gaps = 2/111 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 23  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 82

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGK 110
             M++FVK  T +T T +E     T++N+K  IQ KEGI  DQ  L++ GK
Sbjct: 83  GGMQIFVKTLTGKTIT-LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 132



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/107 (42%), Positives = 63/107 (58%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 9   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 68

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ 392
           IQK STLH+VL     +          +I+L +  S+  E  K K Q
Sbjct: 69  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQ 115



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 81/152 (53%), Gaps = 6/152 (3%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 9   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 68

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 69  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 128

Query: 257 YAGT---KLEACKTLASYGIKNNYVLDVLPSP 285
           +AG    +L+  K  +    +++ + +VL SP
Sbjct: 129 FAGKRRIRLKMSKLRSRTRKESHQISNVLSSP 160


>gi|301769157|ref|XP_002919997.1| PREDICTED: ubiquitin D-like [Ailuropoda melanoleuca]
          Length = 231

 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/165 (36%), Positives = 94/165 (56%), Gaps = 7/165 (4%)

Query: 199 DMKDECLLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGN---QDL 255
           ++KD  L       +QIFV+T   + + LE+E     ++VK  + +   +++ +   + L
Sbjct: 61  ELKDSSLHLPKRVKMQIFVKTLTVKTIALEMEPSYTTKNVKAKIQDREGITVCHTQQKRL 120

Query: 256 FYAGTKLE-ACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDV 311
            +AG +LE  C TL+ + I+    L     L    QIFVKT   KTI+L+V+P NT+++V
Sbjct: 121 TFAGKQLEDGCHTLSDFNIREGSTLHRVLHLRGGMQIFVKTLISKTISLEVEPSNTIRNV 180

Query: 312 KVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K K+ DK   P   Q ++F GK+L +   L+ Y IQK STLH+VL
Sbjct: 181 KAKIQDKEGIPPDQQRLIFVGKQLEDGISLSDYIIQKGSTLHLVL 225



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 88/159 (55%), Gaps = 6/159 (3%)

Query: 43  DYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGI---Q 99
           + G   +S+LH   +   +M++FVK  T +T   +E  P +T +N+K  IQ +EGI    
Sbjct: 58  NLGELKDSSLHLPKR--VKMQIFVKTLTVKT-IALEMEPSYTTKNVKAKIQDREGITVCH 114

Query: 100 SDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHS 159
           + Q  L + GK L++   T++  NI+  S +H V   +  + IFVK    + ++LEV+ S
Sbjct: 115 TQQKRLTFAGKQLEDGCHTLSDFNIREGSTLHRVLHLRGGMQIFVKTLISKTISLEVEPS 174

Query: 160 FAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFY 198
             IR+VKA +    G+      +I+ GK+LED  +L+ Y
Sbjct: 175 NTIRNVKAKIQDKEGIPPDQQRLIFVGKQLEDGISLSDY 213



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/141 (38%), Positives = 82/141 (58%), Gaps = 11/141 (7%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICD-----LFFAGDRLEAG--RLVDYGIRNNSTLH 53
           ++++ S   KN+KA I  +EGI+  +C      L FAG +LE G   L D+ IR  STLH
Sbjct: 89  LEMEPSYTTKNVKAKIQDREGIT--VCHTQQKRLTFAGKQLEDGCHTLSDFNIREGSTLH 146

Query: 54  FLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLK 113
            +      M++FVK   ++T + +E  P +T++N+K  IQ KEGI  DQ  L++ GK L 
Sbjct: 147 RVLHLRGGMQIFVKTLISKTIS-LEVEPSNTIRNVKAKIQDKEGIPPDQQRLIFVGKQL- 204

Query: 114 EDTATMTSMNIKSESIIHLVF 134
           ED  +++   I+  S +HLV 
Sbjct: 205 EDGISLSDYIIQKGSTLHLVL 225


>gi|403275421|ref|XP_003929446.1| PREDICTED: polyubiquitin-C-like, partial [Saimiri boliviensis
           boliviensis]
          Length = 113

 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/107 (43%), Positives = 65/107 (60%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L + H L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGHTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ 392
           IQK STLH+VL     +          +I+L +  S+  E  K K Q
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQ 107



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 49/114 (42%), Positives = 70/114 (61%), Gaps = 2/114 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGHTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGV 175
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 112



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 45/99 (45%), Positives = 62/99 (62%), Gaps = 2/99 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE G  L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGHTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGI 98
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGI 112



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 44/113 (38%), Positives = 65/113 (57%), Gaps = 3/113 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE   TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGHTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTP 322
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 113



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 58/103 (56%), Gaps = 3/103 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED  TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGHTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVK 239
           ++ E  L +       +QIFV+T   + + LEVE    + +VK
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVK 103


>gi|168036461|ref|XP_001770725.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162677943|gb|EDQ64407.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 153

 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 85/148 (57%), Gaps = 3/148 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    +++VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDSIQNVKTKIQDKEGIPPDQQRLIFAGKQLEDERTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L     I VKT  GK I +D++PY+T++ +K ++ +K   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPYDTIERIKERVEEKEGIPPVQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLA 357
           FAGK++ ++     YNI+  S LH+VLA
Sbjct: 121 FAGKQMNDDKTARDYNIEGGSVLHLVLA 148



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/147 (34%), Positives = 81/147 (55%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     ++QN+KT IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDSIQNVKTKIQDKEGIPPDQQRLIFAGKQL-EDERTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +    I VK  TG+ + ++++    I  +K  V    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPYDTIERIKERVEEKEGIPPVQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK++ D KT   Y+++   +L +
Sbjct: 119 LIFAGKQMNDDKTARDYNIEGGSVLHL 145



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/138 (37%), Positives = 76/138 (55%), Gaps = 6/138 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +++Q+VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDSIQNVKTKIQDKEGIPPDQQRLIFAGKQLEDERTLADYN 60

Query: 346 IQKHSTLHMVLAPSS----RIIELPLIFIDPSISLSISISEVKEMAKVK--FQAAVKELL 399
           IQK STLH+VL        ++  L    I+  I    +I  +KE  + K       + L+
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPYDTIERIKERVEEKEGIPPVQQRLI 120

Query: 400 VDQVALQDDRTLADYGMD 417
                + DD+T  DY ++
Sbjct: 121 FAGKQMNDDKTARDYNIE 138



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/136 (36%), Positives = 75/136 (55%), Gaps = 3/136 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE  R L DY I+  STLH + +  
Sbjct: 15  LEVESSDSIQNVKTKIQDKEGIPPDQQRLIFAGKQLEDERTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
               + VK  T +    ++  PY T++ IK  ++ KEGI   Q  L++ GK + +D  T 
Sbjct: 75  GGTMIKVKTLTGKEIE-IDIEPYDTIERIKERVEEKEGIPPVQQRLIFAGKQMNDD-KTA 132

Query: 120 TSMNIKSESIIHLVFC 135
              NI+  S++HLV  
Sbjct: 133 RDYNIEGGSVLHLVLA 148



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 3/143 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S +I++VK  +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDSIQNVKTKIQDKEGIPPDQQRLIFAGKQLEDERTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +         I V+T   + + +++E    +  +KE V     +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPYDTIERIKERVEEKEGIPPVQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVL 279
           +AG ++   KT   Y I+   VL
Sbjct: 121 FAGKQMNDDKTARDYNIEGGSVL 143


>gi|77994697|gb|ABB13626.1| polyubiquitin [Aurigamonas solis]
          Length = 112

 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/111 (45%), Positives = 68/111 (61%), Gaps = 7/111 (6%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITLDV+P +T+++VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLDVEPSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFI----DPSISLSISISEVKEMAKVKFQ 392
           IQK STLH+VL      ++   IF+      +I+L +  S+  E  K K Q
Sbjct: 61  IQKESTLHLVLRLRGGSMQ---IFVKTLTGKTITLDVEPSDTIENVKTKIQ 108



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/107 (42%), Positives = 66/107 (61%), Gaps = 3/107 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +  P  T++N+KT IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-DVEPSDTIENVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPK-EILSIFVKAATGEIVNLEVKHSFAIRDVKA 167
            NI+ ES +HLV   +   + IFVK  TG+ + L+V+ S  I +VK 
Sbjct: 59  YNIQKESTLHLVLRLRGGSMQIFVKTLTGKTITLDVEPSDTIENVKT 105



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/110 (40%), Positives = 66/110 (60%), Gaps = 4/110 (3%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + L+VE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLDVEPSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKN----NYVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDK 318
           I+     + VL +     QIFVKT  GKTITLDV+P +T+++VK K+ DK
Sbjct: 61  IQKESTLHLVLRLRGGSMQIFVKTLTGKTITLDVEPSDTIENVKTKIQDK 110



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/99 (45%), Positives = 60/99 (60%), Gaps = 3/99 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHF-LHQN 58
           + V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH  L   
Sbjct: 15  LDVEPSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 59  LSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEG 97
              M++FVK  T +T T ++  P  T++N+KT IQ KEG
Sbjct: 75  GGSMQIFVKTLTGKTIT-LDVEPSDTIENVKTKIQDKEG 112



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 60/104 (57%), Gaps = 4/104 (3%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + L+V+ S  I +VK  +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLDVEPSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDEC----LLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVK 239
           ++ E     +L +   S+QIFV+T   + + L+VE    + +VK
Sbjct: 61  IQKESTLHLVLRLRGGSMQIFVKTLTGKTITLDVEPSDTIENVK 104


>gi|413920770|gb|AFW60702.1| putative ubiquitin family protein [Zea mays]
          Length = 221

 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 111/223 (49%), Gaps = 15/223 (6%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK++TG  V L V  +  +  VK  +            ++Y+G +LED +TLA Y 
Sbjct: 1   MKIFVKSSTGRTVCLRVHPADTVHTVKTKI-------QEQQYLVYDGVQLEDDRTLADYG 53

Query: 200 MKDECLLEMFPSSIQIF-VRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYA 258
           ++ + +L++    +QIF V T     + LEVE    + ++KE +        G Q L + 
Sbjct: 54  IEHKSVLDL-KEKMQIFIVETLAGTTITLEVESSETIDNIKERIKESEGFPKGQQCLIFD 112

Query: 259 GTKLEACKTLASYGIKNNYVLDVL------PSPFQIFVKTWGGKTITLDVQPYNTVQDVK 312
             +LE   TLA   I     L ++           I +  + GK +TL+V+  +T+ +VK
Sbjct: 113 NKQLEDNSTLADNNISEGSTLLLVLRHMLLRGTMHISIYMFSGKVVTLEVKRSDTIDNVK 172

Query: 313 VKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           +K+++K  T    Q I+F G +L  +  LA Y I+   TLHM+
Sbjct: 173 LKIYEKTHTRHIQQMIIFDGIKLEGSKTLAYYGIEDGDTLHMM 215



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/187 (34%), Positives = 94/187 (50%), Gaps = 11/187 (5%)

Query: 29  LFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSE-MKLFVKIPTNQTATVVEAMPYHTVQ 86
           L + G +LE  R L DYGI + S L     +L E M++F+      T   +E     T+ 
Sbjct: 36  LVYDGVQLEDDRTLADYGIEHKSVL-----DLKEKMQIFIVETLAGTTITLEVESSETID 90

Query: 87  NIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCP---KEILSIF 143
           NIK  I+  EG    Q  L++D K L ED +T+   NI   S + LV      +  + I 
Sbjct: 91  NIKERIKESEGFPKGQQCLIFDNKQL-EDNSTLADNNISEGSTLLLVLRHMLLRGTMHIS 149

Query: 144 VKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDE 203
           +   +G++V LEVK S  I +VK  +           ++I++G KLE SKTLA+Y ++D 
Sbjct: 150 IYMFSGKVVTLEVKRSDTIDNVKLKIYEKTHTRHIQQMIIFDGIKLEGSKTLAYYGIEDG 209

Query: 204 CLLEMFP 210
             L M P
Sbjct: 210 DTLHMMP 216



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 110/229 (48%), Gaps = 20/229 (8%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           MK+FVK  T +T   +   P  TV  +KT IQ       +Q  LVYDG  L ED  T+  
Sbjct: 1   MKIFVKSSTGRTV-CLRVHPADTVHTVKTKIQ-------EQQYLVYDGVQL-EDDRTLAD 51

Query: 122 MNIKSESIIHLVFCPKEILSIF-VKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADH 180
             I+ +S++ L    KE + IF V+   G  + LEV+ S  I ++K  +    G      
Sbjct: 52  YGIEHKSVLDL----KEKMQIFIVETLAGTTITLEVESSETIDNIKERIKESEGFPKGQQ 107

Query: 181 IMIYEGKKLEDSKTLAFYDMKDEC------LLEMFPSSIQIFVRTPIEEIVRLEVEVLIV 234
            +I++ K+LED+ TLA  ++ +           +   ++ I +     ++V LEV+    
Sbjct: 108 CLIFDNKQLEDNSTLADNNISEGSTLLLVLRHMLLRGTMHISIYMFSGKVVTLEVKRSDT 167

Query: 235 VRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVLP 283
           + +VK  +          Q + + G KLE  KTLA YGI++   L ++P
Sbjct: 168 IDNVKLKIYEKTHTRHIQQMIIFDGIKLEGSKTLAYYGIEDGDTLHMMP 216



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 109/215 (50%), Gaps = 18/215 (8%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           ++IFV++     V L V     V  VK  +          Q L Y G +LE  +TLA YG
Sbjct: 1   MKIFVKSSTGRTVCLRVHPADTVHTVKTKIQE-------QQYLVYDGVQLEDDRTLADYG 53

Query: 273 IKNNYVLDVLPSPFQIF-VKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFA 331
           I++  VLD L    QIF V+T  G TITL+V+   T+ ++K ++ +    P   Q ++F 
Sbjct: 54  IEHKSVLD-LKEKMQIFIVETLAGTTITLEVESSETIDNIKERIKESEGFPKGQQCLIFD 112

Query: 332 GKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPL---IFIDPSISLSISISEVKEMAK 388
            K+L +N  LA  NI + STL +VL        + +   +F    ++L +  S+  +  K
Sbjct: 113 NKQLEDNSTLADNNISEGSTLLLVLRHMLLRGTMHISIYMFSGKVVTLEVKRSDTIDNVK 172

Query: 389 VKFQAA-----VKELLV-DQVALQDDRTLADYGMD 417
           +K         ++++++ D + L+  +TLA YG++
Sbjct: 173 LKIYEKTHTRHIQQMIIFDGIKLEGSKTLAYYGIE 207


>gi|325677695|ref|ZP_08157347.1| ubiquitin family [Ruminococcus albus 8]
 gi|324110663|gb|EGC04827.1| ubiquitin family [Ruminococcus albus 8]
          Length = 646

 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 2/89 (2%)

Query: 268 LASYGIKNNYVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQS 327
           ++  G+   ++L    S  QIF KT  GKTITLDV+P +++++VK K+ DK   P   Q 
Sbjct: 26  MSGGGVLGGFILSA--SAMQIFTKTLTGKTITLDVEPSDSIENVKAKIQDKEGIPPDQQR 83

Query: 328 IVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           ++FAGK+L +N  LA YNIQK STLH+VL
Sbjct: 84  LIFAGKQLEDNRTLADYNIQKESTLHLVL 112



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 46/75 (61%), Gaps = 2/75 (2%)

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
           S M++F K  T +T T+ +  P  +++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 40  SAMQIFTKTLTGKTITL-DVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTL 97

Query: 120 TSMNIKSESIIHLVF 134
              NI+ ES +HLV 
Sbjct: 98  ADYNIQKESTLHLVL 112



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 1/67 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I+N+KA I  KEGI  D   L FAG +LE  R L DY I+  STLH + +N+
Sbjct: 56  LDVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRNV 115

Query: 60  SEMKLFV 66
           +    ++
Sbjct: 116 ATHDFYI 122



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 47/86 (54%)

Query: 123 NIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIM 182
           N+    ++         + IF K  TG+ + L+V+ S +I +VKA +    G+      +
Sbjct: 25  NMSGGGVLGGFILSASAMQIFTKTLTGKTITLDVEPSDSIENVKAKIQDKEGIPPDQQRL 84

Query: 183 IYEGKKLEDSKTLAFYDMKDECLLEM 208
           I+ GK+LED++TLA Y+++ E  L +
Sbjct: 85  IFAGKQLEDNRTLADYNIQKESTLHL 110


>gi|113431898|emb|CAJ90900.1| ubiquitin/ribosomal fusion protein homologue [Salmo salar]
          Length = 135

 Score = 86.7 bits (213), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 44/85 (51%), Positives = 58/85 (68%)

Query: 283 PSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLA 342
           P+  QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+
Sbjct: 7   PTRMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 66

Query: 343 RYNIQKHSTLHMVLAPSSRIIELPL 367
            YNIQK STLH+VL     IIE  L
Sbjct: 67  DYNIQKESTLHLVLRLRGGIIEPSL 91



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 2/75 (2%)

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
           + M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 8   TRMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 65

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 66  SDYNIQKESTLHLVL 80



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/74 (36%), Positives = 43/74 (58%)

Query: 135 CPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKT 194
           C    + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +T
Sbjct: 5   CRPTRMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 64

Query: 195 LAFYDMKDECLLEM 208
           L+ Y+++ E  L +
Sbjct: 65  LSDYNIQKESTLHL 78



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1  MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
          ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 24 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 79



 Score = 42.7 bits (99), Expect = 0.34,   Method: Composition-based stats.
 Identities = 23/73 (31%), Positives = 40/73 (54%)

Query: 210 PSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLA 269
           P+ +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+
Sbjct: 7   PTRMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 66

Query: 270 SYGIKNNYVLDVL 282
            Y I+    L ++
Sbjct: 67  DYNIQKESTLHLV 79


>gi|308480326|ref|XP_003102370.1| hypothetical protein CRE_04940 [Caenorhabditis remanei]
 gi|308262036|gb|EFP05989.1| hypothetical protein CRE_04940 [Caenorhabditis remanei]
          Length = 194

 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/119 (39%), Positives = 67/119 (56%)

Query: 282 LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVL 341
           L    QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L
Sbjct: 72  LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPADQQRLIFAGKQLEDGRTL 131

Query: 342 ARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAAVKELLV 400
           + YNIQK STLH+VL     +          +I+L +  S+  E  K K Q  +  + V
Sbjct: 132 SDYNIQKESTLHLVLRLRGGMQMFVKTLTGKTITLDVEASDTIENVKAKIQKKIGNIFV 190



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 53/139 (38%), Positives = 82/139 (58%), Gaps = 7/139 (5%)

Query: 47  RNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLV 106
           +  STLH + +    M++FVK  T +T T+ E     T++N+K  IQ KEGI +DQ  L+
Sbjct: 61  KKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPADQQRLI 119

Query: 107 YDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVK 166
           + GK L ED  T++  NI+ ES +HLV   +  + +FVK  TG+ + L+V+ S  I +VK
Sbjct: 120 FAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQMFVKTLTGKTITLDVEASDTIENVK 178

Query: 167 AIVGSVVGVSAADHIMIYE 185
           A +   +G     +I +YE
Sbjct: 179 AKIQKKIG-----NIFVYE 192



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 71/129 (55%), Gaps = 3/129 (2%)

Query: 114 EDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVV 173
           ED   +     K ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    
Sbjct: 50  EDPIELEKATKKKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 109

Query: 174 GVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVE 230
           G+ A    +I+ GK+LED +TL+ Y+++ E  L +       +Q+FV+T   + + L+VE
Sbjct: 110 GIPADQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQMFVKTLTGKTITLDVE 169

Query: 231 VLIVVRDVK 239
               + +VK
Sbjct: 170 ASDTIENVK 178



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 64/112 (57%), Gaps = 3/112 (2%)

Query: 211 SSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLAS 270
             +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ 
Sbjct: 74  GGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPADQQRLIFAGKQLEDGRTLSD 133

Query: 271 YGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKL 319
           Y I+    L +   L    Q+FVKT  GKTITLDV+  +T+++VK K+  K+
Sbjct: 134 YNIQKESTLHLVLRLRGGMQMFVKTLTGKTITLDVEASDTIENVKAKIQKKI 185



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/99 (45%), Positives = 62/99 (62%), Gaps = 4/99 (4%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 90  LEVEASDTIENVKAKIQDKEGIPADQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 149

Query: 60  SEMKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEG 97
             M++FVK  T +T T+ VEA    T++N+K  IQ K G
Sbjct: 150 GGMQMFVKTLTGKTITLDVEA--SDTIENVKAKIQKKIG 186


>gi|115438809|ref|NP_001043684.1| Os01g0641200 [Oryza sativa Japonica Group]
 gi|302393767|sp|P0C032.2|RUB3_ORYSJ RecName: Full=Ubiquitin-like protein-NEDD8-like protein RUB3;
           Contains: RecName: Full=Ubiquitin-like protein;
           Contains: RecName: Full=NEDD8-like protein RUB3;
           AltName: Full=OsRUB3; AltName: Full=Ubiquitin-related
           protein 3; Flags: Precursor
 gi|20161535|dbj|BAB90457.1| putative polyubiquitin 2 [Oryza sativa Japonica Group]
 gi|20805124|dbj|BAB92795.1| putative polyubiquitin 2 [Oryza sativa Japonica Group]
 gi|113533215|dbj|BAF05598.1| Os01g0641200 [Oryza sativa Japonica Group]
 gi|125527016|gb|EAY75130.1| hypothetical protein OsI_03024 [Oryza sativa Indica Group]
 gi|125571348|gb|EAZ12863.1| hypothetical protein OsJ_02783 [Oryza sativa Japonica Group]
          Length = 154

 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 82/147 (55%), Gaps = 6/147 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+Q+VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVL----APSSRIIELPLIFIDPSISLSISISEVKEMAKVK--FQAAVKELL 399
           IQK STLH+VL      + ++  L    ID  I ++ ++  +KE  + +       + L+
Sbjct: 61  IQKESTLHLVLRLRGGLNVKVRTLTGKEIDIDIEMTDTVDRIKERVEEREGIPPVQQRLI 120

Query: 400 VDQVALQDDRTLADYGMDLSEKVVLVF 426
                L DD+T  DY ++    + LV 
Sbjct: 121 YGGKQLADDKTAHDYKIEAGSVLHLVL 147



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 50/147 (34%), Positives = 83/147 (56%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+QN+K  +Q KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  L++ V+  TG+ ++++++ +  +  +K  V    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGLNVKVRTLTGKEIDIDIEMTDTVDRIKERVEEREGIPPVQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +IY GK+L D KT   Y ++   +L +
Sbjct: 119 LIYGGKQLADDKTAHDYKIEAGSVLHL 145



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 80/148 (54%), Gaps = 3/148 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    +++VK  V +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L     + V+T  GK I +D++  +TV  +K ++ ++   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGLNVKVRTLTGKEIDIDIEMTDTVDRIKERVEEREGIPPVQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLA 357
           + GK+L ++     Y I+  S LH+VLA
Sbjct: 121 YGGKQLADDKTAHDYKIEAGSVLHLVLA 148



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/136 (36%), Positives = 75/136 (55%), Gaps = 3/136 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA +  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             + + V+  T +   +   M   TV  IK  ++ +EGI   Q  L+Y GK L +D  T 
Sbjct: 75  GGLNVKVRTLTGKEIDIDIEMT-DTVDRIKERVEEREGIPPVQQRLIYGGKQLADD-KTA 132

Query: 120 TSMNIKSESIIHLVFC 135
               I++ S++HLV  
Sbjct: 133 HDYKIEAGSVLHLVLA 148



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 74/143 (51%), Gaps = 3/143 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I++VKA V    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       + + VRT   + + +++E+   V  +KE V     +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGLNVKVRTLTGKEIDIDIEMTDTVDRIKERVEEREGIPPVQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVL 279
           Y G +L   KT   Y I+   VL
Sbjct: 121 YGGKQLADDKTAHDYKIEAGSVL 143


>gi|324539232|gb|ADY49558.1| Polyubiquitin-C, partial [Ascaris suum]
          Length = 148

 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/125 (41%), Positives = 73/125 (58%), Gaps = 2/125 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M+LFVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQLFVKTLTGKTITL-EVEPSDTIENVKVKIQDKEGIPPDQQRLIFAGKQL-EDGRTLLD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEG 186
           +I+ G
Sbjct: 119 LIFAG 123



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 46/106 (43%), Positives = 64/106 (60%)

Query: 287 QIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNI 346
           Q+FVKT  GKTITL+V+P +T+++VKVK+ DK   P   Q ++FAGK+L +   L  YNI
Sbjct: 2   QLFVKTLTGKTITLEVEPSDTIENVKVKIQDKEGIPPDQQRLIFAGKQLEDGRTLLDYNI 61

Query: 347 QKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ 392
           QK STLH+VL     +          +I+L +  S+  E  K K Q
Sbjct: 62  QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQ 107



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/110 (43%), Positives = 68/110 (61%), Gaps = 2/110 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L+DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKVKIQDKEGIPPDQQRLIFAGKQLEDGRTLLDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDG 109
             M++FVK  T +T T +E     T++N+K  IQ KEGI  DQ  L++ G
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIENVKAKIQDKEGIPPDQQRLIFAG 123



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/123 (37%), Positives = 70/123 (56%), Gaps = 3/123 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +Q+FV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL  Y 
Sbjct: 1   MQLFVKTLTGKTITLEVEPSDTIENVKVKIQDKEGIPPDQQRLIFAGKQLEDGRTLLDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAG 332
           FAG
Sbjct: 121 FAG 123



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 3/123 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + +FVK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+LED +TL  Y+
Sbjct: 1   MQLFVKTLTGKTITLEVEPSDTIENVKVKIQDKEGIPPDQQRLIFAGKQLEDGRTLLDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAG 259
           +AG
Sbjct: 121 FAG 123


>gi|297606280|ref|NP_001058221.2| Os06g0650100 [Oryza sativa Japonica Group]
 gi|255677281|dbj|BAF20135.2| Os06g0650100, partial [Oryza sativa Japonica Group]
          Length = 177

 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 83/150 (55%), Gaps = 3/150 (2%)

Query: 211 SSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLAS 270
           S +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA 
Sbjct: 23  SGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 82

Query: 271 YGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQS 327
           Y I+    L +   L     I VKT  GK I +D++P +T+  +K ++ +K   P   Q 
Sbjct: 83  YNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQR 142

Query: 328 IVFAGKRLFENHVLARYNIQKHSTLHMVLA 357
           +++AGK+L ++     YNI+  S LH+VLA
Sbjct: 143 LIYAGKQLADDKTAKDYNIEGGSVLHLVLA 172



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/140 (38%), Positives = 77/140 (55%), Gaps = 6/140 (4%)

Query: 284 SPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLAR 343
           S  QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA 
Sbjct: 23  SGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 82

Query: 344 YNIQKHSTLHMVLAPSS----RIIELPLIFIDPSISLSISISEVKEMAKVK--FQAAVKE 397
           YNIQK STLH+VL        ++  L    I+  I  + +I  +KE  + K       + 
Sbjct: 83  YNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQR 142

Query: 398 LLVDQVALQDDRTLADYGMD 417
           L+     L DD+T  DY ++
Sbjct: 143 LIYAGKQLADDKTAKDYNIE 162



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/150 (35%), Positives = 82/150 (54%), Gaps = 2/150 (1%)

Query: 59  LSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
           +S M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T
Sbjct: 22  VSGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 79

Query: 119 MTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAA 178
           +   NI+ ES +HLV   +    I VK  TG+ + ++++ +  I  +K  V    G+   
Sbjct: 80  LADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPV 139

Query: 179 DHIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
              +IY GK+L D KT   Y+++   +L +
Sbjct: 140 QQRLIYAGKQLADDKTAKDYNIEGGSVLHL 169



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/136 (38%), Positives = 74/136 (54%), Gaps = 3/136 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 39  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 98

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
               + VK  T +    ++  P  T+  IK  ++ KEGI   Q  L+Y GK L +D  T 
Sbjct: 99  GGTMIKVKTLTGKEIE-IDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADD-KTA 156

Query: 120 TSMNIKSESIIHLVFC 135
              NI+  S++HLV  
Sbjct: 157 KDYNIEGGSVLHLVLA 172



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 72/143 (50%), Gaps = 3/143 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 25  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 84

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +         I V+T   + + +++E    +  +KE V     +    Q L 
Sbjct: 85  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 144

Query: 257 YAGTKLEACKTLASYGIKNNYVL 279
           YAG +L   KT   Y I+   VL
Sbjct: 145 YAGKQLADDKTAKDYNIEGGSVL 167


>gi|255089220|ref|XP_002506532.1| predicted protein [Micromonas sp. RCC299]
 gi|226521804|gb|ACO67790.1| predicted protein [Micromonas sp. RCC299]
          Length = 205

 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 50/112 (44%), Positives = 69/112 (61%), Gaps = 6/112 (5%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPL-IFIDPSISLSISISEVKEMAKVKFQAAVK 396
           IQK STLH+VL       ++P  IF DP++     ++EVKE      +A V+
Sbjct: 61  IQKESTLHLVLRLRGGHCQVPCGIFDDPAM-----VAEVKEACATIRKAMVQ 107



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/73 (45%), Positives = 44/73 (60%), Gaps = 2/73 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVF 134
            NI+ ES +HLV 
Sbjct: 59  YNIQKESTLHLVL 71



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 42/69 (60%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM 208
           ++ E  L +
Sbjct: 61  IQKESTLHL 69



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1  MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
          ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70



 Score = 39.7 bits (91), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 36/67 (53%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVL 279
           I+    L
Sbjct: 61  IQKESTL 67


>gi|356533093|ref|XP_003535103.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-like [Glycine max]
          Length = 226

 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 55/123 (44%), Positives = 73/123 (59%), Gaps = 3/123 (2%)

Query: 11  NLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIP 69
           NLK +I +  GI  D   L F G +LE GR LVDY I+N STLH + +    M++FVK  
Sbjct: 98  NLKLLITIFAGILPDQQRLIFVGKQLEDGRTLVDYNIQNESTLHLVLRLRGGMQIFVKTL 157

Query: 70  TNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESI 129
             +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+   +I+ ESI
Sbjct: 158 IGKTITL-EVESCDTIDNVKAKIQDKEGIPPDQXRLIFAGKQL-EDGRTLADYDIQKESI 215

Query: 130 IHL 132
           +HL
Sbjct: 216 LHL 218



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/107 (43%), Positives = 64/107 (59%), Gaps = 3/107 (2%)

Query: 253 QDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQ 309
           Q L + G +LE  +TL  Y I+N   L +   L    QIFVKT  GKTITL+V+  +T+ 
Sbjct: 114 QRLIFVGKQLEDGRTLVDYNIQNESTLHLVLRLRGGMQIFVKTLIGKTITLEVESCDTID 173

Query: 310 DVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           +VK K+ DK   P     ++FAGK+L +   LA Y+IQK S LH+ L
Sbjct: 174 NVKAKIQDKEGIPPDQXRLIFAGKQLEDGRTLADYDIQKESILHLPL 220



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 47/122 (38%), Positives = 72/122 (59%), Gaps = 1/122 (0%)

Query: 87  NIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKA 146
           N+K +I +  GI  DQ  L++ GK L ED  T+   NI++ES +HLV   +  + IFVK 
Sbjct: 98  NLKLLITIFAGILPDQQRLIFVGKQL-EDGRTLVDYNIQNESTLHLVLRLRGGMQIFVKT 156

Query: 147 ATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLL 206
             G+ + LEV+    I +VKA +    G+      +I+ GK+LED +TLA YD++ E +L
Sbjct: 157 LIGKTITLEVESCDTIDNVKAKIQDKEGIPPDQXRLIFAGKQLEDGRTLADYDIQKESIL 216

Query: 207 EM 208
            +
Sbjct: 217 HL 218



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 64/119 (53%), Gaps = 3/119 (2%)

Query: 164 DVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTP 220
           ++K ++    G+      +I+ GK+LED +TL  Y++++E  L +       +QIFV+T 
Sbjct: 98  NLKLLITIFAGILPDQQRLIFVGKQLEDGRTLVDYNIQNESTLHLVLRLRGGMQIFVKTL 157

Query: 221 IEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           I + + LEVE    + +VK  + +   +      L +AG +LE  +TLA Y I+   +L
Sbjct: 158 IGKTITLEVESCDTIDNVKAKIQDKEGIPPDQXRLIFAGKQLEDGRTLADYDIQKESIL 216



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 33/55 (60%), Gaps = 1/55 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHF 54
           ++V+  + I N+KA I  KEGI  D   L FAG +LE GR L DY I+  S LH 
Sbjct: 164 LEVESCDTIDNVKAKIQDKEGIPPDQXRLIFAGKQLEDGRTLADYDIQKESILHL 218



 Score = 45.4 bits (106), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 8/105 (7%)

Query: 326 QSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKE 385
           Q ++F GK+L +   L  YNIQ  STLH+VL     +       I  +I+L +   +  +
Sbjct: 114 QRLIFVGKQLEDGRTLVDYNIQNESTLHLVLRLRGGMQIFVKTLIGKTITLEVESCDTID 173

Query: 386 MAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVL 424
             K K Q           L+     L+D RTLADY  D+ ++ +L
Sbjct: 174 NVKAKIQDKEGIPPDQXRLIFAGKQLEDGRTLADY--DIQKESIL 216


>gi|158148903|dbj|BAF81986.1| polyubiquitin [Glehnia littoralis]
          Length = 141

 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/138 (40%), Positives = 78/138 (56%), Gaps = 3/138 (2%)

Query: 39  GR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEG 97
           GR L DY I+  STLH + +    M++FVK  T +T T+ E     T+ N+K   Q KEG
Sbjct: 1   GRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKTQDKEG 59

Query: 98  IQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVK 157
           I  DQ  L++ GK L E   T+   NI+ ES +HLV   +  + IFVK  TG+ + LEV+
Sbjct: 60  IPPDQQWLIFAGKQL-EAGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 118

Query: 158 HSFAIRDVKAIVGSVVGV 175
            S  I +VKA +    G+
Sbjct: 119 SSDTIDNVKAKIQDKEGI 136



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/130 (40%), Positives = 70/130 (53%), Gaps = 3/130 (2%)

Query: 266 KTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTP 322
           +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K  DK   P
Sbjct: 2   RTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKTQDKEGIP 61

Query: 323 LHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISE 382
              Q ++FAGK+L     LA YNIQK STLH+VL     +          +I+L +  S+
Sbjct: 62  PDQQWLIFAGKQLEAGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD 121

Query: 383 VKEMAKVKFQ 392
             +  K K Q
Sbjct: 122 TIDNVKAKIQ 131



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 51/137 (37%), Positives = 75/137 (54%), Gaps = 6/137 (4%)

Query: 192 SKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDL 248
            +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +VK    +   +
Sbjct: 1   GRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKTQDKEGI 60

Query: 249 SLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPY 305
               Q L +AG +LEA +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  
Sbjct: 61  PPDQQWLIFAGKQLEAGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESS 120

Query: 306 NTVQDVKVKLFDKLQTP 322
           +T+ +VK K+ DK   P
Sbjct: 121 DTIDNVKAKIQDKEGIP 137



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/103 (45%), Positives = 62/103 (60%), Gaps = 2/103 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA    KEGI  D   L FAG +LEAGR L DY I+  STLH + +  
Sbjct: 39  LEVESSDTIDNVKAKTQDKEGIPPDQQWLIFAGKQLEAGRTLADYNIQKESTLHLVLRLR 98

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQ 102
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ
Sbjct: 99  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQ 140



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 69/125 (55%), Gaps = 3/125 (2%)

Query: 118 TMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSA 177
           T+   NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA      G+  
Sbjct: 3   TLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKTQDKEGIPP 62

Query: 178 ADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIV 234
               +I+ GK+LE  +TLA Y+++ E  L +       +QIFV+T   + + LEVE    
Sbjct: 63  DQQWLIFAGKQLEAGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 122

Query: 235 VRDVK 239
           + +VK
Sbjct: 123 IDNVK 127


>gi|255966040|gb|ACU45305.1| polyubiquitin 6 [Rhodomonas sp. CCMP768]
          Length = 125

 Score = 86.3 bits (212), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 51/107 (47%), Positives = 66/107 (61%), Gaps = 3/107 (2%)

Query: 253 QDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQ 309
           Q   +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ 
Sbjct: 13  QRWIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 72

Query: 310 DVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
            VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL
Sbjct: 73  MVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 119



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 53/120 (44%), Positives = 69/120 (57%), Gaps = 3/120 (2%)

Query: 16  IHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTA 74
           I  KEGI  D     FAG +LE GR L DY I+  STLH + +    M++FVK  T +T 
Sbjct: 2   IQDKEGIPPDQQRWIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 61

Query: 75  TVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVF 134
           T +E     T+  +K+ IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV 
Sbjct: 62  T-LEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVL 119



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 47/117 (40%), Positives = 68/117 (58%), Gaps = 1/117 (0%)

Query: 92  IQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEI 151
           IQ KEGI  DQ   ++ GK L ED  T+   NI+ ES +HLV   +  + IFVK  TG+ 
Sbjct: 2   IQDKEGIPPDQQRWIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 60

Query: 152 VNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
           + LEV+ S  I  VK+ +    G+      +I+ GK+LED +TLA Y+++ E  L +
Sbjct: 61  ITLEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 117



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/119 (34%), Positives = 57/119 (47%), Gaps = 6/119 (5%)

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q  +FAGK+L +   LA YNIQK STLH+VL     +          +
Sbjct: 1   KIQDKEGIPPDQQRWIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 60

Query: 374 ISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +M K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 61  ITLEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 119



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 3/112 (2%)

Query: 174 GVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVE 230
           G+       I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE
Sbjct: 7   GIPPDQQRWIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 66

Query: 231 VLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVL 282
               +  VK  + +   +    Q L +AG +LE  +TLA Y I+    L ++
Sbjct: 67  SSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 118



 Score = 45.8 bits (107), Expect = 0.045,   Method: Composition-based stats.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I  +K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 63  LEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 118


>gi|157138585|ref|XP_001664265.1| ubiquitin [Aedes aegypti]
 gi|108880553|gb|EAT44778.1| AAEL003888-PA [Aedes aegypti]
          Length = 154

 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 88/148 (59%), Gaps = 4/148 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + L+VE +  ++++K  + +   +    Q L +AG +LE  + L+ Y 
Sbjct: 1   MQIFVKTLTGKTITLDVEAVDTIQNIKGKIEDKEGIPPDQQRLIFAGKQLEDGRALSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQT-PLHLQSI 328
           ++    L +   L    QIFVK   G+T+ +D +P ++V+ ++VK+ +KL+  P +   +
Sbjct: 61  VQKGSTLHLVLRLRGGMQIFVKMLTGRTMAIDTEPEDSVETLRVKISEKLEEMPPNQLRL 120

Query: 329 VFAGKRLFENHVLARYNIQKHSTLHMVL 356
           +FAGK+L +   L  Y+I K ST+H+VL
Sbjct: 121 IFAGKQLEDGRTLQEYSIIKGSTVHLVL 148



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/136 (36%), Positives = 77/136 (56%), Gaps = 7/136 (5%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITLDV+  +T+Q++K K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLDVEAVDTIQNIKGKIEDKEGIPPDQQRLIFAGKQLEDGRALSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAAVKELLVDQV-- 403
           +QK STLH+VL     +     +    ++++     +  E  +VK    ++E+  +Q+  
Sbjct: 61  VQKGSTLHLVLRLRGGMQIFVKMLTGRTMAIDTEPEDSVETLRVKISEKLEEMPPNQLRL 120

Query: 404 -----ALQDDRTLADY 414
                 L+D RTL +Y
Sbjct: 121 IFAGKQLEDGRTLQEY 136



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/136 (36%), Positives = 76/136 (55%), Gaps = 4/136 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+  + I+N+K  I  KEGI  D   L FAG +LE GR L DY ++  STLH + +  
Sbjct: 15  LDVEAVDTIQNIKGKIEDKEGIPPDQQRLIFAGKQLEDGRALSDYNVQKGSTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVK-EGIQSDQFTLVYDGKLLKEDTAT 118
             M++FVK+ T +T   ++  P  +V+ ++  I  K E +  +Q  L++ GK L ED  T
Sbjct: 75  GGMQIFVKMLTGRTM-AIDTEPEDSVETLRVKISEKLEEMPPNQLRLIFAGKQL-EDGRT 132

Query: 119 MTSMNIKSESIIHLVF 134
           +   +I   S +HLV 
Sbjct: 133 LQEYSIIKGSTVHLVL 148



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 80/139 (57%), Gaps = 5/139 (3%)

Query: 62  MKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMT 120
           M++FVK  T +T T+ VEA+   T+QNIK  I+ KEGI  DQ  L++ GK L ED   ++
Sbjct: 1   MQIFVKTLTGKTITLDVEAV--DTIQNIKGKIEDKEGIPPDQQRLIFAGKQL-EDGRALS 57

Query: 121 SMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADH 180
             N++  S +HLV   +  + IFVK  TG  + ++ +   ++  ++  +   +     + 
Sbjct: 58  DYNVQKGSTLHLVLRLRGGMQIFVKMLTGRTMAIDTEPEDSVETLRVKISEKLEEMPPNQ 117

Query: 181 I-MIYEGKKLEDSKTLAFY 198
           + +I+ GK+LED +TL  Y
Sbjct: 118 LRLIFAGKQLEDGRTLQEY 136



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 70/138 (50%), Gaps = 4/138 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + L+V+    I+++K  +    G+      +I+ GK+LED + L+ Y+
Sbjct: 1   MQIFVKTLTGKTITLDVEAVDTIQNIKGKIEDKEGIPPDQQRLIFAGKQLEDGRALSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQ-DL 255
           ++    L +       +QIFV+      + ++ E    V  ++  ++  ++    NQ  L
Sbjct: 61  VQKGSTLHLVLRLRGGMQIFVKMLTGRTMAIDTEPEDSVETLRVKISEKLEEMPPNQLRL 120

Query: 256 FYAGTKLEACKTLASYGI 273
            +AG +LE  +TL  Y I
Sbjct: 121 IFAGKQLEDGRTLQEYSI 138


>gi|159472951|ref|XP_001694608.1| bi-ubiquitin [Chlamydomonas reinhardtii]
 gi|158276832|gb|EDP02603.1| bi-ubiquitin [Chlamydomonas reinhardtii]
 gi|300720946|gb|ADK33602.1| bi-ubiquitin [Chlamydomonas reinhardtii]
          Length = 153

 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 83/148 (56%), Gaps = 3/148 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L     I VKT  GK I +D++P +T++ +K ++ +K   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMMIKVKTLTGKEIEIDIEPSDTIERIKERVEEKEGIPPVQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLA 357
           FAGK++ ++     YNI+  S LH+VLA
Sbjct: 121 FAGKQMNDDKQAKDYNIEGGSVLHLVLA 148



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 52/138 (37%), Positives = 76/138 (55%), Gaps = 6/138 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSS----RIIELPLIFIDPSISLSISISEVKEMAKVK--FQAAVKELL 399
           IQK STLH+VL        ++  L    I+  I  S +I  +KE  + K       + L+
Sbjct: 61  IQKESTLHLVLRLRGGMMIKVKTLTGKEIEIDIEPSDTIERIKERVEEKEGIPPVQQRLI 120

Query: 400 VDQVALQDDRTLADYGMD 417
                + DD+   DY ++
Sbjct: 121 FAGKQMNDDKQAKDYNIE 138



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/147 (34%), Positives = 81/147 (55%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + I VK  TG+ + ++++ S  I  +K  V    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMMIKVKTLTGKEIEIDIEPSDTIERIKERVEEKEGIPPVQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK++ D K    Y+++   +L +
Sbjct: 119 LIFAGKQMNDDKQAKDYNIEGGSVLHL 145



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/136 (37%), Positives = 76/136 (55%), Gaps = 3/136 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M + VK  T +    ++  P  T++ IK  ++ KEGI   Q  L++ GK + +D    
Sbjct: 75  GGMMIKVKTLTGKEIE-IDIEPSDTIERIKERVEEKEGIPPVQQRLIFAGKQMNDDKQA- 132

Query: 120 TSMNIKSESIIHLVFC 135
              NI+  S++HLV  
Sbjct: 133 KDYNIEGGSVLHLVLA 148



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 3/143 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       + I V+T   + + +++E    +  +KE V     +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMMIKVKTLTGKEIEIDIEPSDTIERIKERVEEKEGIPPVQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVL 279
           +AG ++   K    Y I+   VL
Sbjct: 121 FAGKQMNDDKQAKDYNIEGGSVL 143


>gi|303287967|ref|XP_003063272.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226455104|gb|EEH52408.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 205

 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 52/116 (44%), Positives = 70/116 (60%), Gaps = 8/116 (6%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPL-IFIDPSISLSISISEVKEMAKV--KFQAAVKEL 398
           IQK STLH+VL       ++P  IF DP++     I+E+KE      K  A + EL
Sbjct: 61  IQKESTLHLVLRLRGGHCQVPCGIFDDPAM-----IAELKEACATIRKAMAQITEL 111



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/73 (45%), Positives = 44/73 (60%), Gaps = 2/73 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVF 134
            NI+ ES +HLV 
Sbjct: 59  YNIQKESTLHLVL 71



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 42/69 (60%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM 208
           ++ E  L +
Sbjct: 61  IQKESTLHL 69



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1  MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
          ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70



 Score = 39.3 bits (90), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 36/67 (53%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVL 279
           I+    L
Sbjct: 61  IQKESTL 67


>gi|317134055|ref|YP_004089966.1| ubiquitin [Ruminococcus albus 7]
 gi|315450517|gb|ADU24080.1| ubiquitin [Ruminococcus albus 7]
          Length = 246

 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 42/81 (51%), Positives = 57/81 (70%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITLDV+P +T+++VK K+ DK     + Q ++FAGK+L ++  LA YN
Sbjct: 27  MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKESIAPNKQRLIFAGKQLEDDRTLADYN 86

Query: 346 IQKHSTLHMVLAPSSRIIELP 366
           IQK STLH+VL  +  I  +P
Sbjct: 87  IQKESTLHLVLRANGDIEIVP 107



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 42/69 (60%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + L+V+ S  I +VKA +     ++     +I+ GK+LED +TLA Y+
Sbjct: 27  MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKESIAPNKQRLIFAGKQLEDDRTLADYN 86

Query: 200 MKDECLLEM 208
           ++ E  L +
Sbjct: 87  IQKESTLHL 95



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 20/200 (10%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I+N+KA I  KE I+ +   L FAG +LE  R L DY I+  STLH + +  
Sbjct: 41  LDVEPSDTIENVKAKIQDKESIAPNKQRLIFAGKQLEDDRTLADYNIQKESTLHLVLRAN 100

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
            ++++ V  P N         P  +   ++    V     S  +++V    +   DTA  
Sbjct: 101 GDIEI-VPDPDNM------PNPIPSTAGMEVSYDV-----SPTYSVVIPASVSLSDTAET 148

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAAT--GEIVNLEVKHSFAIRDVKAIVGSVVGVSA 177
           T     +   + L    K +++I   + T  G+  N ++  S A   +K+       VS 
Sbjct: 149 TRQITATN--VRLTQNAKIVVTIDSASNTESGDTFNAKIGDSTANYTIKS---GDTNVSV 203

Query: 178 ADHIMIYEGKKLEDSKTLAF 197
              +  ++ K  E SKTLAF
Sbjct: 204 GGTVAEFDTKTGEQSKTLAF 223



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 18/148 (12%)

Query: 204 CLLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLE 263
           C L    +++QIFV+T   + + L+VE    + +VK  + +   ++   Q L +AG +LE
Sbjct: 20  CTLTA--NAMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKESIAPNKQRLIFAGKQLE 77

Query: 264 ACKTLASYGI----------KNNYVLDVLPSPFQI--FVKTWGGKTITLDVQP-YNTVQD 310
             +TLA Y I          + N  ++++P P  +   + +  G  ++ DV P Y+ V  
Sbjct: 78  DDRTLADYNIQKESTLHLVLRANGDIEIVPDPDNMPNPIPSTAGMEVSYDVSPTYSVVIP 137

Query: 311 VKVKLFDKLQTPLHLQSIVFAGKRLFEN 338
             V L D  +T    + I     RL +N
Sbjct: 138 ASVSLSDTAET---TRQITATNVRLTQN 162


>gi|110288802|gb|ABB47002.2| Protein kinase domain containing protein, expressed [Oryza sativa
           Japonica Group]
 gi|222612580|gb|EEE50712.1| hypothetical protein OsJ_30992 [Oryza sativa Japonica Group]
          Length = 795

 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 118/230 (51%), Gaps = 9/230 (3%)

Query: 140 LSIFVK-AATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFY 198
           + I+VK  +  + + L VK+S ++ DVK  +    G+   + +++Y G++L+D + L+ +
Sbjct: 523 MRIYVKIPSIAKTIKLIVKNSNSVADVKVEIERKEGILQDNQMLMYAGRQLDDRQILSHF 582

Query: 199 DMKDECLLEMF--P-SSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDL 255
            + D+ +L +   P   ++IFV       VRL+VE    V DVK ++  ++      Q L
Sbjct: 583 GLSDDQILHVLICPFEKLRIFVNISNRRTVRLDVESWYTVADVKVMIEALLGFPACTQLL 642

Query: 256 FYAGT----KLEACKTLASYGIKNNYVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDV 311
            +       +L   +TL    +KNN VL + P+  QIF+K+W G+T+T  V  ++T +++
Sbjct: 643 MWTNPSVDIELMDTETLKEQNVKNNTVLLLHPN-VQIFIKSWEGRTLTTLVSMFDTAEEI 701

Query: 312 KVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSR 361
             K+  + Q       + + G  L     L  Y I+ +ST+ + L  S R
Sbjct: 702 WKKIKKRSQIKAEKYFLCYRGHVLPPGVSLDMYKIESNSTISIRLRNSYR 751



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 54/224 (24%), Positives = 113/224 (50%), Gaps = 6/224 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M+++VKIP+      +     ++V ++K  I+ KEGI  D   L+Y G+ L +D   ++ 
Sbjct: 523 MRIYVKIPSIAKTIKLIVKNSNSVADVKVEIERKEGILQDNQMLMYAGRQL-DDRQILSH 581

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
             +  + I+H++ CP E L IFV  +    V L+V+  + + DVK ++ +++G  A   +
Sbjct: 582 FGLSDDQILHVLICPFEKLRIFVNISNRRTVRLDVESWYTVADVKVMIEALLGFPACTQL 641

Query: 182 MIYEGK----KLEDSKTLAFYDMKDECLLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRD 237
           +++       +L D++TL   ++K+  +L + P ++QIF+++     +   V +     +
Sbjct: 642 LMWTNPSVDIELMDTETLKEQNVKNNTVLLLHP-NVQIFIKSWEGRTLTTLVSMFDTAEE 700

Query: 238 VKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV 281
           + + +     +      L Y G  L    +L  Y I++N  + +
Sbjct: 701 IWKKIKKRSQIKAEKYFLCYRGHVLPPGVSLDMYKIESNSTISI 744



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 98/202 (48%), Gaps = 13/202 (6%)

Query: 3   VKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGRLVD-YGIRNNSTLHFLHQNLSE 61
           VK S  + ++K  I  KEGI +D   L +AG +L+  +++  +G+ ++  LH L     +
Sbjct: 540 VKNSNSVADVKVEIERKEGILQDNQMLMYAGRQLDDRQILSHFGLSDDQILHVLICPFEK 599

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVY-----DGKLLKEDT 116
           +++FV I +N+    ++   ++TV ++K MI+   G  +    L++     D +L+  DT
Sbjct: 600 LRIFVNI-SNRRTVRLDVESWYTVADVKVMIEALLGFPACTQLLMWTNPSVDIELM--DT 656

Query: 117 ATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVS 176
            T+   N+K+ ++  L+  P   + IF+K+  G  +   V       ++   +     + 
Sbjct: 657 ETLKEQNVKNNTV--LLLHPN--VQIFIKSWEGRTLTTLVSMFDTAEEIWKKIKKRSQIK 712

Query: 177 AADHIMIYEGKKLEDSKTLAFY 198
           A  + + Y G  L    +L  Y
Sbjct: 713 AEKYFLCYRGHVLPPGVSLDMY 734



 Score = 40.0 bits (92), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 50/86 (58%), Gaps = 5/86 (5%)

Query: 274 KNNYVLDVLPSPFQIFVKTWG-GKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAG 332
           +++YV+D +    +I+VK     KTI L V+  N+V DVKV++  K       Q +++AG
Sbjct: 515 RDDYVIDGM----RIYVKIPSIAKTIKLIVKNSNSVADVKVEIERKEGILQDNQMLMYAG 570

Query: 333 KRLFENHVLARYNIQKHSTLHMVLAP 358
           ++L +  +L+ + +     LH+++ P
Sbjct: 571 RQLDDRQILSHFGLSDDQILHVLICP 596


>gi|79677318|emb|CAI77927.1| polyubiquitine protein [Bathysiphon sp. 3980]
 gi|79677325|emb|CAI77928.1| polyubiquitine protein [Bathysiphon sp. 3980]
          Length = 113

 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 48/111 (43%), Positives = 68/111 (61%), Gaps = 7/111 (6%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITLDV+P +T+Q+VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLDVEPNDTIQNVKAKIQDKEGIPPEQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFI----DPSISLSISISEVKEMAKVKFQ 392
           IQK STLH+VL      ++   IF+      +I+L +  ++  +  K K Q
Sbjct: 61  IQKESTLHLVLRLRGGTMQ---IFVKTLTGKTITLDVEPNDTIQNVKAKIQ 108



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/115 (40%), Positives = 71/115 (61%), Gaps = 3/115 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +  P  T+QN+K  IQ KEGI  +Q  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-DVEPNDTIQNVKAKIQDKEGIPPEQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPK-EILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGV 175
            NI+ ES +HLV   +   + IFVK  TG+ + L+V+ +  I++VKA +    G+
Sbjct: 59  YNIQKESTLHLVLRLRGGTMQIFVKTLTGKTITLDVEPNDTIQNVKAKIQDKEGI 113



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/110 (40%), Positives = 67/110 (60%), Gaps = 4/110 (3%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + L+VE    +++VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLDVEPNDTIQNVKAKIQDKEGIPPEQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKN----NYVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDK 318
           I+     + VL +     QIFVKT  GKTITLDV+P +T+Q+VK K+ DK
Sbjct: 61  IQKESTLHLVLRLRGGTMQIFVKTLTGKTITLDVEPNDTIQNVKAKIQDK 110



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 45/100 (45%), Positives = 61/100 (61%), Gaps = 3/100 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHF-LHQN 58
           + V+ ++ I+N+KA I  KEGI  +   L FAG +LE GR L DY I+  STLH  L   
Sbjct: 15  LDVEPNDTIQNVKAKIQDKEGIPPEQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 59  LSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGI 98
              M++FVK  T +T T ++  P  T+QN+K  IQ KEGI
Sbjct: 75  GGTMQIFVKTLTGKTIT-LDVEPNDTIQNVKAKIQDKEGI 113



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 63/104 (60%), Gaps = 4/104 (3%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + L+V+ +  I++VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLDVEPNDTIQNVKAKIQDKEGIPPEQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDEC----LLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVK 239
           ++ E     +L +   ++QIFV+T   + + L+VE    +++VK
Sbjct: 61  IQKESTLHLVLRLRGGTMQIFVKTLTGKTITLDVEPNDTIQNVK 104


>gi|148684097|gb|EDL16044.1| mCG13235 [Mus musculus]
          Length = 134

 Score = 85.1 bits (209), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 44/81 (54%), Positives = 57/81 (70%)

Query: 287 QIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNI 346
           QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L + H L+ YNI
Sbjct: 8   QIFVKTLMGKTITLEVEPSDTIENVKAKIQDKEGLPPDQQRLIFAGKQLEDGHTLSDYNI 67

Query: 347 QKHSTLHMVLAPSSRIIELPL 367
           QK STLH+VL     IIE  L
Sbjct: 68  QKESTLHLVLRLRGGIIEPSL 88



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 2/78 (2%)

Query: 57  QNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDT 116
           Q  + M++FVK    +T T+ E  P  T++N+K  IQ KEG+  DQ  L++ GK L ED 
Sbjct: 2   QIFANMQIFVKTLMGKTITL-EVEPSDTIENVKAKIQDKEGLPPDQQRLIFAGKQL-EDG 59

Query: 117 ATMTSMNIKSESIIHLVF 134
            T++  NI+ ES +HLV 
Sbjct: 60  HTLSDYNIQKESTLHLVL 77



 Score = 48.1 bits (113), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/69 (36%), Positives = 40/69 (57%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK   G+ + LEV+ S  I +VKA +    G+      +I+ GK+LED  TL+ Y+
Sbjct: 7   MQIFVKTLMGKTITLEVEPSDTIENVKAKIQDKEGLPPDQQRLIFAGKQLEDGHTLSDYN 66

Query: 200 MKDECLLEM 208
           ++ E  L +
Sbjct: 67  IQKESTLHL 75



 Score = 47.4 bits (111), Expect = 0.012,   Method: Composition-based stats.
 Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1  MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
          ++V+ S+ I+N+KA I  KEG+  D   L FAG +LE G  L DY I+  STLH +
Sbjct: 21 LEVEPSDTIENVKAKIQDKEGLPPDQQRLIFAGKQLEDGHTLSDYNIQKESTLHLV 76



 Score = 40.0 bits (92), Expect = 2.0,   Method: Composition-based stats.
 Identities = 23/72 (31%), Positives = 40/72 (55%)

Query: 211 SSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLAS 270
           +++QIFV+T + + + LEVE    + +VK  + +   L    Q L +AG +LE   TL+ 
Sbjct: 5   ANMQIFVKTLMGKTITLEVEPSDTIENVKAKIQDKEGLPPDQQRLIFAGKQLEDGHTLSD 64

Query: 271 YGIKNNYVLDVL 282
           Y I+    L ++
Sbjct: 65  YNIQKESTLHLV 76


>gi|156083999|ref|XP_001609483.1| ubiquitin / ribosomal protein CEP52 [Babesia bovis T2Bo]
 gi|154796734|gb|EDO05915.1| ubiquitin / ribosomal protein CEP52 [Babesia bovis]
          Length = 131

 Score = 85.1 bits (209), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 43/84 (51%), Positives = 58/84 (69%)

Query: 287 QIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNI 346
           QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNI
Sbjct: 2   QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

Query: 347 QKHSTLHMVLAPSSRIIELPLIFI 370
           QK STLH+VL     IIE  L+ +
Sbjct: 62  QKESTLHLVLRLRGGIIEPSLVIL 85



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/73 (46%), Positives = 47/73 (64%), Gaps = 2/73 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVF 134
            NI+ ES +HLV 
Sbjct: 59  YNIQKESTLHLVL 71



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/69 (37%), Positives = 42/69 (60%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM 208
           ++ E  L +
Sbjct: 61  IQKESTLHL 69



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1  MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
          ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 15 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70



 Score = 39.3 bits (90), Expect = 3.8,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 38/70 (54%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDVL 282
           I+    L ++
Sbjct: 61  IQKESTLHLV 70


>gi|388508634|gb|AFK42383.1| unknown [Medicago truncatula]
          Length = 153

 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 82/148 (55%), Gaps = 3/148 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L     I VKT  GK I +D++P +T+  +K ++ +K   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRVI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLA 357
           +AGK+L ++     YNI+  S LH+VLA
Sbjct: 121 YAGKQLADDKTAKEYNIEGGSVLHLVLA 148



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 80/147 (54%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +    I VK  TG+ + ++++ +  I  +K  V    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +IY GK+L D KT   Y+++   +L +
Sbjct: 119 VIYAGKQLADDKTAKEYNIEGGSVLHL 145



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/136 (38%), Positives = 74/136 (54%), Gaps = 3/136 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
               + VK  T +    ++  P  T+  IK  ++ KEGI   Q  ++Y GK L +D  T 
Sbjct: 75  GGTMIKVKTLTGKEIE-IDIEPTDTIDRIKERVEEKEGIPPVQQRVIYAGKQLADD-KTA 132

Query: 120 TSMNIKSESIIHLVFC 135
              NI+  S++HLV  
Sbjct: 133 KEYNIEGGSVLHLVLA 148



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 72/143 (50%), Gaps = 3/143 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +         I V+T   + + +++E    +  +KE V     +    Q + 
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRVI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVL 279
           YAG +L   KT   Y I+   VL
Sbjct: 121 YAGKQLADDKTAKEYNIEGGSVL 143


>gi|342326368|gb|AEL23099.1| ubiquitin [Cherax quadricarinatus]
          Length = 99

 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 45/93 (48%), Positives = 61/93 (65%), Gaps = 3/93 (3%)

Query: 267 TLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPL 323
           TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P 
Sbjct: 1   TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 60

Query: 324 HLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
             Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 61  DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 93



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 58/94 (61%), Gaps = 2/94 (2%)

Query: 41  LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQS 100
           L DY I+  STLH + +    M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  
Sbjct: 2   LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPP 60

Query: 101 DQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVF 134
           DQ  L++ GK L ED  T++  NI+ ES +HLV 
Sbjct: 61  DQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVL 93



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 55/91 (60%)

Query: 118 TMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSA 177
           T++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+  
Sbjct: 1   TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 60

Query: 178 ADHIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
               +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 61  DQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 91



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1  MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
          ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 37 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 92



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 3/89 (3%)

Query: 194 TLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSL 250
           TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +  
Sbjct: 1   TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 60

Query: 251 GNQDLFYAGTKLEACKTLASYGIKNNYVL 279
             Q L +AG +LE  +TL+ Y I+    L
Sbjct: 61  DQQRLIFAGKQLEDGRTLSDYNIQKESTL 89



 Score = 39.7 bits (91), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 6/93 (6%)

Query: 340 VLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------A 393
            L+ YNIQK STLH+VL     +          +I+L +  S+  E  K K Q       
Sbjct: 1   TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 60

Query: 394 AVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
             + L+     L+D RTL+DY +     + LV 
Sbjct: 61  DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 93


>gi|323454622|gb|EGB10492.1| hypothetical protein AURANDRAFT_23768 [Aureococcus anophagefferens]
          Length = 217

 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 45/90 (50%), Positives = 59/90 (65%), Gaps = 1/90 (1%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITLDV+P +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPL-IFIDPSI 374
           IQK STLH+VL       ++P  IF DP +
Sbjct: 61  IQKESTLHLVLRLRGGHCQVPCGIFDDPKL 90



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 2/73 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +  P  T+ N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-DVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVF 134
            NI+ ES +HLV 
Sbjct: 59  YNIQKESTLHLVL 71



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 12/157 (7%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + L+V+ S  I +VK  +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEMFPSSIQIFVRTP--IEEIVRLEVEVLIVVRDVKEIVANIIDL----SLG-- 251
           ++ E  L +         + P  I +  +L  E+L     +++ +A I +L    S G  
Sbjct: 61  IQKESTLHLVLRLRGGHCQVPCGIFDDPKLVAELLEACATIEKAMAQIQELYGKMSEGPL 120

Query: 252 --NQDLFYAGTKLEACKTLASYGIKNNYVLDVLPSPF 286
             NQ   +  TK E C  +    + +NY L     PF
Sbjct: 121 VLNQITRWINTKEEHCAKIID--LISNYCLCQRCKPF 155



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 34/56 (60%), Gaps = 1/56 (1%)

Query: 1  MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
          + V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 15 LDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70


>gi|84997964|ref|XP_953703.1| ubiquitin/60S ribosomal fusion protein [Theileria annulata]
 gi|65304700|emb|CAI73025.1| ubiquitin/60S ribosomal fusion protein, putative [Theileria
           annulata]
          Length = 131

 Score = 84.7 bits (208), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 43/84 (51%), Positives = 58/84 (69%)

Query: 287 QIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNI 346
           QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNI
Sbjct: 2   QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

Query: 347 QKHSTLHMVLAPSSRIIELPLIFI 370
           QK STLH+VL     IIE  L+ +
Sbjct: 62  QKESTLHLVLRLRGGIIEPSLVIL 85



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/73 (46%), Positives = 47/73 (64%), Gaps = 2/73 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVF 134
            NI+ ES +HLV 
Sbjct: 59  YNIQKESTLHLVL 71



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/69 (37%), Positives = 42/69 (60%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM 208
           ++ E  L +
Sbjct: 61  IQKESTLHL 69



 Score = 51.2 bits (121), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1  MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
          ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 15 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70



 Score = 39.3 bits (90), Expect = 4.2,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 38/70 (54%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDVL 282
           I+    L ++
Sbjct: 61  IQKESTLHLV 70


>gi|71033899|ref|XP_766591.1| ubiquitin/ribosomal fusion protein [Theileria parva strain Muguga]
 gi|68353548|gb|EAN34308.1| ubiquitin/ribosomal fusion protein, putative [Theileria parva]
 gi|428673439|gb|EKX74352.1| ubiquitin/ribosomal fusion protein, putative [Babesia equi]
          Length = 131

 Score = 84.7 bits (208), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 43/84 (51%), Positives = 58/84 (69%)

Query: 287 QIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNI 346
           QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNI
Sbjct: 2   QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

Query: 347 QKHSTLHMVLAPSSRIIELPLIFI 370
           QK STLH+VL     IIE  L+ +
Sbjct: 62  QKESTLHLVLRLRGGIIEPSLVIL 85



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/73 (46%), Positives = 47/73 (64%), Gaps = 2/73 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVF 134
            NI+ ES +HLV 
Sbjct: 59  YNIQKESTLHLVL 71



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/69 (37%), Positives = 42/69 (60%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM 208
           ++ E  L +
Sbjct: 61  IQKESTLHL 69



 Score = 51.2 bits (121), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1  MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
          ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 15 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70



 Score = 39.3 bits (90), Expect = 4.2,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 38/70 (54%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDVL 282
           I+    L ++
Sbjct: 61  IQKESTLHLV 70


>gi|403221428|dbj|BAM39561.1| Ubc protein [Theileria orientalis strain Shintoku]
          Length = 131

 Score = 84.7 bits (208), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 43/84 (51%), Positives = 58/84 (69%)

Query: 287 QIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNI 346
           QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNI
Sbjct: 2   QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

Query: 347 QKHSTLHMVLAPSSRIIELPLIFI 370
           QK STLH+VL     IIE  L+ +
Sbjct: 62  QKESTLHLVLRLRGGIIEPSLVIL 85



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 34/73 (46%), Positives = 47/73 (64%), Gaps = 2/73 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVF 134
            NI+ ES +HLV 
Sbjct: 59  YNIQKESTLHLVL 71



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/69 (37%), Positives = 42/69 (60%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM 208
           ++ E  L +
Sbjct: 61  IQKESTLHL 69



 Score = 51.2 bits (121), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1  MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
          ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 15 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70



 Score = 39.3 bits (90), Expect = 4.3,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 38/70 (54%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDVL 282
           I+    L ++
Sbjct: 61  IQKESTLHLV 70


>gi|237838205|ref|XP_002368400.1| ubiquitin / ribosomal protein CEP52 fusion protein, putative
           [Toxoplasma gondii ME49]
 gi|401402053|ref|XP_003881158.1| putative ubiquitin / ribosomal protein CEP52 fusion protein
           [Neospora caninum Liverpool]
 gi|211966064|gb|EEB01260.1| ubiquitin / ribosomal protein CEP52 fusion protein, putative
           [Toxoplasma gondii ME49]
 gi|221484327|gb|EEE22623.1| ubiquitin / ribosomal protein CEP52 fusion protein, putative
           [Toxoplasma gondii GT1]
 gi|221505694|gb|EEE31339.1| ubiquitin / ribosomal protein CEP52 fusion protein, putative
           [Toxoplasma gondii VEG]
 gi|314998875|gb|ADT65351.1| 10 kDa excretory-secretory antigen [Toxoplasma gondii]
 gi|325115570|emb|CBZ51125.1| putative ubiquitin / ribosomal protein CEP52 fusion protein
           [Neospora caninum Liverpool]
          Length = 129

 Score = 84.7 bits (208), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 46/90 (51%), Positives = 60/90 (66%), Gaps = 7/90 (7%)

Query: 287 QIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNI 346
           QIFVKT  GKTITLDV+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNI
Sbjct: 2   QIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

Query: 347 QKHSTLHMVLAPSSRIIELPLIFIDPSISL 376
           QK STLH+VL     IIE       PS++L
Sbjct: 62  QKESTLHLVLRLRGGIIE-------PSLAL 84



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/73 (45%), Positives = 47/73 (64%), Gaps = 2/73 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-DVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVF 134
            NI+ ES +HLV 
Sbjct: 59  YNIQKESTLHLVL 71



 Score = 50.8 bits (120), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/69 (36%), Positives = 42/69 (60%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + L+V+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM 208
           ++ E  L +
Sbjct: 61  IQKESTLHL 69



 Score = 50.1 bits (118), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1  MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
          + V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 15 LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70



 Score = 40.0 bits (92), Expect = 2.1,   Method: Composition-based stats.
 Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 10/110 (9%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + L+VE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDVLPSPFQIFVKTWGG---KTITLDVQPYNTVQDVKVKLFDKL 319
           I+         S   + ++  GG    ++ L  Q YN  + V  K + +L
Sbjct: 61  IQKE-------STLHLVLRLRGGIIEPSLALLAQKYNCEKKVCRKCYARL 103


>gi|357494497|ref|XP_003617537.1| Bi-ubiquitin [Medicago truncatula]
 gi|355518872|gb|AET00496.1| Bi-ubiquitin [Medicago truncatula]
 gi|388497058|gb|AFK36595.1| unknown [Medicago truncatula]
          Length = 153

 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 82/148 (55%), Gaps = 3/148 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L     I VKT  GK I +D++P +T+  +K ++ +K   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLA 357
           +AGK+L ++     YNI+  S LH+VLA
Sbjct: 121 YAGKQLADDKTAKEYNIEGGSVLHLVLA 148



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 80/147 (54%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +    I VK  TG+ + ++++ +  I  +K  V    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +IY GK+L D KT   Y+++   +L +
Sbjct: 119 LIYAGKQLADDKTAKEYNIEGGSVLHL 145



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/138 (37%), Positives = 76/138 (55%), Gaps = 6/138 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSS----RIIELPLIFIDPSISLSISISEVKEMAKVK--FQAAVKELL 399
           IQK STLH+VL        ++  L    I+  I  + +I  +KE  + K       + L+
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 400 VDQVALQDDRTLADYGMD 417
                L DD+T  +Y ++
Sbjct: 121 YAGKQLADDKTAKEYNIE 138



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/136 (38%), Positives = 74/136 (54%), Gaps = 3/136 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
               + VK  T +    ++  P  T+  IK  ++ KEGI   Q  L+Y GK L +D  T 
Sbjct: 75  GGTMIKVKTLTGKEIE-IDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADD-KTA 132

Query: 120 TSMNIKSESIIHLVFC 135
              NI+  S++HLV  
Sbjct: 133 KEYNIEGGSVLHLVLA 148



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 72/143 (50%), Gaps = 3/143 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +         I V+T   + + +++E    +  +KE V     +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVL 279
           YAG +L   KT   Y I+   VL
Sbjct: 121 YAGKQLADDKTAKEYNIEGGSVL 143


>gi|302393716|sp|P46575.2|RL40_EIMBO RecName: Full=Ubiquitin-60S ribosomal protein L40; AltName:
           Full=Ubiquitin A-52 residue ribosomal protein fusion
           product 1; Contains: RecName: Full=Ubiquitin; Contains:
           RecName: Full=60S ribosomal protein L40; AltName:
           Full=CEP52; AltName: Full=CEP53; Flags: Precursor
          Length = 129

 Score = 84.7 bits (208), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 47/93 (50%), Positives = 61/93 (65%), Gaps = 7/93 (7%)

Query: 287 QIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNI 346
           QIFVKT  GKTITLDV+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNI
Sbjct: 2   QIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

Query: 347 QKHSTLHMVLAPSSRIIELPLIFIDPSISLSIS 379
           QK STLH+VL     IIE       PS++L  S
Sbjct: 62  QKESTLHLVLRLRGGIIE-------PSLALLAS 87



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/73 (45%), Positives = 47/73 (64%), Gaps = 2/73 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-DVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVF 134
            NI+ ES +HLV 
Sbjct: 59  YNIQKESTLHLVL 71



 Score = 50.8 bits (120), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/69 (36%), Positives = 42/69 (60%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + L+V+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM 208
           ++ E  L +
Sbjct: 61  IQKESTLHL 69



 Score = 50.1 bits (118), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1  MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
          + V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 15 LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70


>gi|332854163|ref|XP_003316257.1| PREDICTED: ubiquitin-60S ribosomal protein L40 isoform 4 [Pan
           troglodytes]
 gi|397493861|ref|XP_003817814.1| PREDICTED: ubiquitin-60S ribosomal protein L40 isoform 7 [Pan
           paniscus]
          Length = 175

 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 56/82 (68%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 48  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 107

Query: 346 IQKHSTLHMVLAPSSRIIELPL 367
           IQK STLH+VL     IIE  L
Sbjct: 108 IQKESTLHLVLRLRGGIIEPSL 129



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 2/75 (2%)

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
           + M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 46  ANMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 103

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 104 SDYNIQKESTLHLVL 118



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 1/74 (1%)

Query: 136 PKEI-LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKT 194
           PK+  + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +T
Sbjct: 43  PKDANMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 102

Query: 195 LAFYDMKDECLLEM 208
           L+ Y+++ E  L +
Sbjct: 103 LSDYNIQKESTLHL 116



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 62  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 117



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 2/75 (2%)

Query: 207 EMFP--SSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEA 264
           +M P  +++QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE 
Sbjct: 40  KMMPKDANMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 99

Query: 265 CKTLASYGIKNNYVL 279
            +TL+ Y I+    L
Sbjct: 100 GRTLSDYNIQKESTL 114


>gi|426387854|ref|XP_004060377.1| PREDICTED: ubiquitin-60S ribosomal protein L40 isoform 5 [Gorilla
           gorilla gorilla]
          Length = 175

 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 56/82 (68%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 48  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 107

Query: 346 IQKHSTLHMVLAPSSRIIELPL 367
           IQK STLH+VL     IIE  L
Sbjct: 108 IQKESTLHLVLRLRGGIIEPSL 129



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 2/75 (2%)

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
           + M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 46  ANMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 103

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 104 SDYNIQKESTLHLVL 118



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 1/74 (1%)

Query: 136 PKEI-LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKT 194
           PK+  + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +T
Sbjct: 43  PKDANMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 102

Query: 195 LAFYDMKDECLLEM 208
           L+ Y+++ E  L +
Sbjct: 103 LSDYNIQKESTLHL 116



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 62  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 117



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 2/75 (2%)

Query: 207 EMFP--SSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEA 264
           +M P  +++QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE 
Sbjct: 40  KMMPKDANMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 99

Query: 265 CKTLASYGIKNNYVL 279
            +TL+ Y I+    L
Sbjct: 100 GRTLSDYNIQKESTL 114


>gi|302393764|sp|P0C073.2|RUB1_DESAN RecName: Full=Ubiquitin-NEDD8-like protein RUB1; Contains: RecName:
           Full=Ubiquitin; Contains: RecName: Full=NEDD8-like
           protein RUB1; AltName: Full=DaRUB1; AltName:
           Full=Ubiquitin-related protein 1; Flags: Precursor
 gi|20562909|gb|AAM22748.1| polyubiquitin 2 [Deschampsia antarctica]
          Length = 153

 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 82/148 (55%), Gaps = 3/148 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L     I VKT  GK I +D++P +T+  VK ++ +K   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLA 357
           +AGK+L ++     YNI+  S LH+VLA
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLA 148



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/138 (39%), Positives = 76/138 (55%), Gaps = 6/138 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSS----RIIELPLIFIDPSISLSISISEVKEMAKVK--FQAAVKELL 399
           IQK STLH+VL        ++  L    I+  I  + +I  VKE  + K       + L+
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLI 120

Query: 400 VDQVALQDDRTLADYGMD 417
                L DD+T  DY ++
Sbjct: 121 YAGKQLADDKTAKDYNIE 138



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 53/147 (36%), Positives = 80/147 (54%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +    I VK  TG+ + ++++ +  I  VK  V    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +IY GK+L D KT   Y+++   +L +
Sbjct: 119 LIYAGKQLADDKTAKDYNIEGGSVLHL 145



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/136 (38%), Positives = 74/136 (54%), Gaps = 3/136 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
               + VK  T +    ++  P  T+  +K  ++ KEGI   Q  L+Y GK L +D  T 
Sbjct: 75  GGTMIKVKTLTGKEIE-IDIEPTDTIDRVKERVEEKEGIPPVQQRLIYAGKQLADD-KTA 132

Query: 120 TSMNIKSESIIHLVFC 135
              NI+  S++HLV  
Sbjct: 133 KDYNIEGGSVLHLVLA 148



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 72/143 (50%), Gaps = 3/143 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +         I V+T   + + +++E    +  VKE V     +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVL 279
           YAG +L   KT   Y I+   VL
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVL 143


>gi|356525758|ref|XP_003531490.1| PREDICTED: ubiquitin-NEDD8-like protein RUB2-like [Glycine max]
 gi|356556999|ref|XP_003546806.1| PREDICTED: ubiquitin-NEDD8-like protein RUB2-like [Glycine max]
 gi|255627501|gb|ACU14095.1| unknown [Glycine max]
          Length = 154

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 82/148 (55%), Gaps = 3/148 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L     I VKT  GK I +D++P +T+  +K ++ +K   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLA 357
           +AGK+L ++     YNI+  S LH+VLA
Sbjct: 121 YAGKQLADDKTAKEYNIEGGSVLHLVLA 148



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 80/147 (54%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +    I VK  TG+ + ++++ +  I  +K  V    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +IY GK+L D KT   Y+++   +L +
Sbjct: 119 LIYAGKQLADDKTAKEYNIEGGSVLHL 145



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/138 (37%), Positives = 76/138 (55%), Gaps = 6/138 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSS----RIIELPLIFIDPSISLSISISEVKEMAKVK--FQAAVKELL 399
           IQK STLH+VL        ++  L    I+  I  + +I  +KE  + K       + L+
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 400 VDQVALQDDRTLADYGMD 417
                L DD+T  +Y ++
Sbjct: 121 YAGKQLADDKTAKEYNIE 138



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/136 (38%), Positives = 74/136 (54%), Gaps = 3/136 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
               + VK  T +    ++  P  T+  IK  ++ KEGI   Q  L+Y GK L +D  T 
Sbjct: 75  GGTMIKVKTLTGKEIE-IDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADD-KTA 132

Query: 120 TSMNIKSESIIHLVFC 135
              NI+  S++HLV  
Sbjct: 133 KEYNIEGGSVLHLVLA 148



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 72/143 (50%), Gaps = 3/143 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +         I V+T   + + +++E    +  +KE V     +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVL 279
           YAG +L   KT   Y I+   VL
Sbjct: 121 YAGKQLADDKTAKEYNIEGGSVL 143


>gi|224083970|ref|XP_002307191.1| predicted protein [Populus trichocarpa]
 gi|118481405|gb|ABK92645.1| unknown [Populus trichocarpa]
 gi|118486039|gb|ABK94863.1| unknown [Populus trichocarpa]
 gi|222856640|gb|EEE94187.1| predicted protein [Populus trichocarpa]
          Length = 157

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 82/148 (55%), Gaps = 3/148 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L     I VKT  GK I +D++P +T+  VK ++ +K   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLA 357
           +AGK+L ++     YNI+  S LH+VLA
Sbjct: 121 YAGKQLGDDKTARDYNIEGGSVLHLVLA 148



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 54/138 (39%), Positives = 76/138 (55%), Gaps = 6/138 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSS----RIIELPLIFIDPSISLSISISEVKEMAKVK--FQAAVKELL 399
           IQK STLH+VL        ++  L    I+  I  + +I  VKE  + K       + L+
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLI 120

Query: 400 VDQVALQDDRTLADYGMD 417
                L DD+T  DY ++
Sbjct: 121 YAGKQLGDDKTARDYNIE 138



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/147 (36%), Positives = 81/147 (55%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +    I VK  TG+ + ++++ +  I  VK  V    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +IY GK+L D KT   Y+++   +L +
Sbjct: 119 LIYAGKQLGDDKTARDYNIEGGSVLHL 145



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/136 (37%), Positives = 74/136 (54%), Gaps = 3/136 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
               + VK  T +    ++  P  T+  +K  ++ KEGI   Q  L+Y GK L +D  T 
Sbjct: 75  GGTMIKVKTLTGKEIE-IDIEPTDTIDRVKERVEEKEGIPPVQQRLIYAGKQLGDD-KTA 132

Query: 120 TSMNIKSESIIHLVFC 135
              NI+  S++HLV  
Sbjct: 133 RDYNIEGGSVLHLVLA 148



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 72/143 (50%), Gaps = 3/143 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK+ +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +         I V+T   + + +++E    +  VKE V     +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVL 279
           YAG +L   KT   Y I+   VL
Sbjct: 121 YAGKQLGDDKTARDYNIEGGSVL 143


>gi|157783445|gb|ABV72530.1| ubiquitin [Heterocapsa triquetra]
          Length = 216

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/101 (46%), Positives = 64/101 (63%), Gaps = 6/101 (5%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITLDV+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPL-IFIDPSISLSISISEVKE 385
           IQK STLH+VL       ++P  IF DP +     +++VKE
Sbjct: 61  IQKESTLHLVLRLRGGHCQVPCGIFDDPKL-----VADVKE 96



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/74 (47%), Positives = 47/74 (63%), Gaps = 4/74 (5%)

Query: 62  MKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMT 120
           M++FVK  T +T T+ VEA    T+ N+K  IQ KEGI  DQ  L++ GK L ED  T++
Sbjct: 1   MQIFVKTLTGKTITLDVEA--SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLS 57

Query: 121 SMNIKSESIIHLVF 134
             NI+ ES +HLV 
Sbjct: 58  DYNIQKESTLHLVL 71



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 42/69 (60%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + L+V+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM 208
           ++ E  L +
Sbjct: 61  IQKESTLHL 69



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 35/56 (62%), Gaps = 1/56 (1%)

Query: 1  MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
          + V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 15 LDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70


>gi|222635996|gb|EEE66128.1| hypothetical protein OsJ_22175 [Oryza sativa Japonica Group]
          Length = 208

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 82/148 (55%), Gaps = 3/148 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L     I VKT  GK I +D++P +T+  +K ++ +K   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLA 357
           +AGK+L ++     YNI+  S LH+VLA
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLA 148



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/138 (38%), Positives = 76/138 (55%), Gaps = 6/138 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSS----RIIELPLIFIDPSISLSISISEVKEMAKVK--FQAAVKELL 399
           IQK STLH+VL        ++  L    I+  I  + +I  +KE  + K       + L+
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 400 VDQVALQDDRTLADYGMD 417
                L DD+T  DY ++
Sbjct: 121 YAGKQLADDKTAKDYNIE 138



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 80/147 (54%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +    I VK  TG+ + ++++ +  I  +K  V    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +IY GK+L D KT   Y+++   +L +
Sbjct: 119 LIYAGKQLADDKTAKDYNIEGGSVLHL 145



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/136 (38%), Positives = 74/136 (54%), Gaps = 3/136 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
               + VK  T +    ++  P  T+  IK  ++ KEGI   Q  L+Y GK L +D  T 
Sbjct: 75  GGTMIKVKTLTGKEIE-IDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADD-KTA 132

Query: 120 TSMNIKSESIIHLVFC 135
              NI+  S++HLV  
Sbjct: 133 KDYNIEGGSVLHLVLA 148



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 72/143 (50%), Gaps = 3/143 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +         I V+T   + + +++E    +  +KE V     +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVL 279
           YAG +L   KT   Y I+   VL
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVL 143


>gi|170034791|ref|XP_001845256.1| ubiquitin [Culex quinquefasciatus]
 gi|167876386|gb|EDS39769.1| ubiquitin [Culex quinquefasciatus]
          Length = 154

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 74/136 (54%), Gaps = 7/136 (5%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITLDV+P +T+Q++K K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLDVEPVDTIQNIKGKIEDKEGIPPDQQRLIFAGKQLEDGRALSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAAVKELLVDQV-- 403
           +QK STLH+VL           +      ++ I   +  +  K +    ++E+  +Q   
Sbjct: 61  VQKGSTLHLVLRLRGGFQIFVKMLTGRCFTVDIEQEDTVDTLKQRVSERLEEMPANQCRL 120

Query: 404 -----ALQDDRTLADY 414
                 L+D RT+ +Y
Sbjct: 121 IFAGKQLEDGRTVGEY 136



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 86/148 (58%), Gaps = 4/148 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + L+VE +  ++++K  + +   +    Q L +AG +LE  + L+ Y 
Sbjct: 1   MQIFVKTLTGKTITLDVEPVDTIQNIKGKIEDKEGIPPDQQRLIFAGKQLEDGRALSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQT-PLHLQSI 328
           ++    L +   L   FQIFVK   G+  T+D++  +TV  +K ++ ++L+  P +   +
Sbjct: 61  VQKGSTLHLVLRLRGGFQIFVKMLTGRCFTVDIEQEDTVDTLKQRVSERLEEMPANQCRL 120

Query: 329 VFAGKRLFENHVLARYNIQKHSTLHMVL 356
           +FAGK+L +   +  Y++ K STLH+VL
Sbjct: 121 IFAGKQLEDGRTVGEYSVIKGSTLHLVL 148



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 76/138 (55%), Gaps = 3/138 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +  P  T+QNIK  I+ KEGI  DQ  L++ GK L ED   ++ 
Sbjct: 1   MQIFVKTLTGKTITL-DVEPVDTIQNIKGKIEDKEGIPPDQQRLIFAGKQL-EDGRALSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            N++  S +HLV   +    IFVK  TG    ++++    +  +K  V   +    A+  
Sbjct: 59  YNVQKGSTLHLVLRLRGGFQIFVKMLTGRCFTVDIEQEDTVDTLKQRVSERLEEMPANQC 118

Query: 182 -MIYEGKKLEDSKTLAFY 198
            +I+ GK+LED +T+  Y
Sbjct: 119 RLIFAGKQLEDGRTVGEY 136



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 74/136 (54%), Gaps = 4/136 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+  + I+N+K  I  KEGI  D   L FAG +LE GR L DY ++  STLH + +  
Sbjct: 15  LDVEPVDTIQNIKGKIEDKEGIPPDQQRLIFAGKQLEDGRALSDYNVQKGSTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVK-EGIQSDQFTLVYDGKLLKEDTAT 118
              ++FVK+ T +  T V+     TV  +K  +  + E + ++Q  L++ GK L ED  T
Sbjct: 75  GGFQIFVKMLTGRCFT-VDIEQEDTVDTLKQRVSERLEEMPANQCRLIFAGKQL-EDGRT 132

Query: 119 MTSMNIKSESIIHLVF 134
           +   ++   S +HLV 
Sbjct: 133 VGEYSVIKGSTLHLVL 148



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 70/138 (50%), Gaps = 4/138 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + L+V+    I+++K  +    G+      +I+ GK+LED + L+ Y+
Sbjct: 1   MQIFVKTLTGKTITLDVEPVDTIQNIKGKIEDKEGIPPDQQRLIFAGKQLEDGRALSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQ-DL 255
           ++    L +        QIFV+        +++E    V  +K+ V+  ++    NQ  L
Sbjct: 61  VQKGSTLHLVLRLRGGFQIFVKMLTGRCFTVDIEQEDTVDTLKQRVSERLEEMPANQCRL 120

Query: 256 FYAGTKLEACKTLASYGI 273
            +AG +LE  +T+  Y +
Sbjct: 121 IFAGKQLEDGRTVGEYSV 138


>gi|339261298|ref|XP_003367976.1| putative ubiquitin family protein [Trichinella spiralis]
 gi|316955939|gb|EFV46696.1| putative ubiquitin family protein [Trichinella spiralis]
          Length = 129

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 48/104 (46%), Positives = 65/104 (62%), Gaps = 3/104 (2%)

Query: 259 GTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKL 315
           G +LE  + L+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+
Sbjct: 8   GKQLEDGRRLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKI 67

Query: 316 FDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPS 359
            DK   P   Q ++FAGK+L +   L+ YNIQK STLH VL  S
Sbjct: 68  QDKEGIPPDQQRLIFAGKQLEDGGALSDYNIQKESTLHAVLPLS 111



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 49/121 (40%), Positives = 70/121 (57%), Gaps = 3/121 (2%)

Query: 33  GDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTM 91
           G +LE GR L DY I+  STLH + +    M++FVK  T +T T+ E  P  T++N+K+ 
Sbjct: 8   GKQLEDGRRLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVEPSDTIENVKSK 66

Query: 92  IQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEI 151
           IQ KEGI  DQ  L++ GK L ED   ++  NI+ ES +H V      + I  K  TG+ 
Sbjct: 67  IQDKEGIPPDQQRLIFAGKQL-EDGGALSDYNIQKESTLHAVLPLSGGMQISGKPLTGKS 125

Query: 152 V 152
           +
Sbjct: 126 I 126



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 36/98 (36%), Positives = 56/98 (57%), Gaps = 1/98 (1%)

Query: 109 GKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAI 168
           GK L ED   ++  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ 
Sbjct: 8   GKQL-EDGRRLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSK 66

Query: 169 VGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLL 206
           +    G+      +I+ GK+LED   L+ Y+++ E  L
Sbjct: 67  IQDKEGIPPDQQRLIFAGKQLEDGGALSDYNIQKESTL 104



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 6/120 (5%)

Query: 186 GKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIV 242
           GK+LED + L+ Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  +
Sbjct: 8   GKQLEDGRRLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKI 67

Query: 243 ANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLD-VLP--SPFQIFVKTWGGKTIT 299
            +   +    Q L +AG +LE    L+ Y I+    L  VLP     QI  K   GK+IT
Sbjct: 68  QDKEGIPPDQQRLIFAGKQLEDGGALSDYNIQKESTLHAVLPLSGGMQISGKPLTGKSIT 127



 Score = 47.4 bits (111), Expect = 0.016,   Method: Composition-based stats.
 Identities = 26/54 (48%), Positives = 35/54 (64%), Gaps = 1/54 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLE-AGRLVDYGIRNNSTLH 53
           ++V+ S+ I+N+K+ I  KEGI  D   L FAG +LE  G L DY I+  STLH
Sbjct: 52  LEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGGALSDYNIQKESTLH 105


>gi|92790180|emb|CAI83759.1| Polyubiqutin 6 [Polyplastron multivesiculatum]
          Length = 81

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/75 (56%), Positives = 53/75 (70%)

Query: 282 LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVL 341
           L    QIFVKT  GKTITL+V+P +T+ +VK K+ DK   P   Q ++FAGK+L +N  L
Sbjct: 1   LRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTL 60

Query: 342 ARYNIQKHSTLHMVL 356
           A YNIQK STLH+VL
Sbjct: 61  ADYNIQKESTLHLVL 75



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/73 (46%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 5   MQIFVKTLTGKTITL-EVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLAD 62

Query: 122 MNIKSESIIHLVF 134
            NI+ ES +HLV 
Sbjct: 63  YNIQKESTLHLVL 75



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 43/69 (62%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED++TLA Y+
Sbjct: 5   MQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYN 64

Query: 200 MKDECLLEM 208
           ++ E  L +
Sbjct: 65  IQKESTLHL 73



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 1/56 (1%)

Query: 1  MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
          ++V+ S+ I N+KA I  KEGI  D   L FAG +LE  R L DY I+  STLH +
Sbjct: 19 LEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLV 74



 Score = 39.7 bits (91), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 36/69 (52%)

Query: 211 SSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLAS 270
             +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA 
Sbjct: 3   GGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLAD 62

Query: 271 YGIKNNYVL 279
           Y I+    L
Sbjct: 63  YNIQKESTL 71


>gi|164510086|emb|CAJ32647.1| ubiquitin [Chorocaris chacei]
          Length = 76

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/72 (55%), Positives = 54/72 (75%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   QS++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQSLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLA 357
           IQK STLH+VL+
Sbjct: 61  IQKESTLHLVLS 72



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/74 (45%), Positives = 48/74 (64%), Gaps = 2/74 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ +L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQSLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFC 135
            NI+ ES +HLV  
Sbjct: 59  YNIQKESTLHLVLS 72



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 42/69 (60%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQSLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM 208
           ++ E  L +
Sbjct: 61  IQKESTLHL 69



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1  MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
          ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 15 LEVEPSDTIENVKAKIQDKEGIPPDQQSLIFAGKQLEDGRTLSDYNIQKESTLHLV 70



 Score = 39.7 bits (91), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 36/67 (53%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQSLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVL 279
           I+    L
Sbjct: 61  IQKESTL 67


>gi|21314339|gb|AAM46896.1|AF506020_1 polyubiquitin [Tribolium castaneum]
          Length = 112

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 68/112 (60%), Gaps = 1/112 (0%)

Query: 92  IQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEI 151
           IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV   +  + IFVK  TG+ 
Sbjct: 2   IQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 60

Query: 152 VNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDE 203
           + LEV+ S  I +VKA +    G+       I+ GK+LED +TL+ Y+++ E
Sbjct: 61  ITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYNIQKE 112



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/101 (44%), Positives = 62/101 (61%), Gaps = 3/101 (2%)

Query: 252 NQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTV 308
            Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+
Sbjct: 12  QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTI 71

Query: 309 QDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKH 349
           ++VK K+ DK   P   Q  +FAGK+L +   L+ YNIQK 
Sbjct: 72  ENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYNIQKE 112



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/113 (45%), Positives = 67/113 (59%), Gaps = 3/113 (2%)

Query: 16  IHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTA 74
           I  KEGI  D   L FAG +LE GR L DY I+  STLH + +    M++FVK  T +T 
Sbjct: 2   IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 61

Query: 75  TVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSE 127
           T+ E  P  T++N+K  IQ KEGI  DQ   ++ GK L ED  T++  NI+ E
Sbjct: 62  TL-EVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQL-EDGRTLSDYNIQKE 112



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 3/104 (2%)

Query: 174 GVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVE 230
           G+      +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE
Sbjct: 7   GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 66

Query: 231 VLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIK 274
               + +VK  + +   +    Q   +AG +LE  +TL+ Y I+
Sbjct: 67  PSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYNIQ 110



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 54/108 (50%), Gaps = 8/108 (7%)

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 1   KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 60

Query: 374 ISLSISISEVKEMAKVKFQAAVKELLVDQV-------ALQDDRTLADY 414
           I+L +  S+  E  K K Q   + +  DQ         L+D RTL+DY
Sbjct: 61  ITLEVEPSDTIENVKAKIQDK-EGIPPDQQRSIFAGKQLEDGRTLSDY 107



 Score = 40.4 bits (93), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 1/48 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIR 47
           ++V+ S+ I+N+KA I  KEGI  D     FAG +LE GR L DY I+
Sbjct: 63  LEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYNIQ 110


>gi|48375058|gb|AAT42196.1| polyubiquitin [Gromia oviformis]
          Length = 113

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/108 (43%), Positives = 66/108 (61%), Gaps = 1/108 (0%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITLDV   +T+++VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLDVNSSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPL-IFIDPSISLSISISEVKEMAKVKFQ 392
           IQK STLH+VL      +++ +      +I+L ++ S+  E  K K Q
Sbjct: 61  IQKESTLHLVLRLRGGSMQIFVKTLTGKTITLDVNSSDTIENVKAKIQ 108



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 45/100 (45%), Positives = 59/100 (59%), Gaps = 3/100 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHF-LHQN 58
           + V  S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH  L   
Sbjct: 15  LDVNSSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 59  LSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGI 98
              M++FVK  T +T T ++     T++N+K  IQ KEGI
Sbjct: 75  GGSMQIFVKTLTGKTIT-LDVNSSDTIENVKAKIQDKEGI 113



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 46/115 (40%), Positives = 67/115 (58%), Gaps = 3/115 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-DVNSSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPK-EILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGV 175
            NI+ ES +HLV   +   + IFVK  TG+ + L+V  S  I +VKA +    G+
Sbjct: 59  YNIQKESTLHLVLRLRGGSMQIFVKTLTGKTITLDVNSSDTIENVKAKIQDKEGI 113



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 42/110 (38%), Positives = 63/110 (57%), Gaps = 4/110 (3%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + L+V     + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLDVNSSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKN----NYVLDVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDK 318
           I+     + VL +     QIFVKT  GKTITLDV   +T+++VK K+ DK
Sbjct: 61  IQKESTLHLVLRLRGGSMQIFVKTLTGKTITLDVNSSDTIENVKAKIQDK 110



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 59/104 (56%), Gaps = 4/104 (3%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + L+V  S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLDVNSSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDEC----LLEMFPSSIQIFVRTPIEEIVRLEVEVLIVVRDVK 239
           ++ E     +L +   S+QIFV+T   + + L+V     + +VK
Sbjct: 61  IQKESTLHLVLRLRGGSMQIFVKTLTGKTITLDVNSSDTIENVK 104


>gi|242093754|ref|XP_002437367.1| hypothetical protein SORBIDRAFT_10g025670 [Sorghum bicolor]
 gi|357123249|ref|XP_003563324.1| PREDICTED: ubiquitin-NEDD8-like protein RUB2-like [Brachypodium
           distachyon]
 gi|302393766|sp|P0C031.2|RUB2_ORYSJ RecName: Full=Ubiquitin-NEDD8-like protein RUB2; Contains: RecName:
           Full=Ubiquitin; Contains: RecName: Full=NEDD8-like
           protein RUB2; AltName: Full=OsRUB2; AltName:
           Full=Ubiquitin-related protein 2; Flags: Precursor
 gi|51534981|dbj|BAD38105.1| polyubiquitin 2 [Oryza sativa Japonica Group]
 gi|215692861|dbj|BAG88281.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218186299|gb|EEC68726.1| hypothetical protein OsI_37226 [Oryza sativa Indica Group]
 gi|218198663|gb|EEC81090.1| hypothetical protein OsI_23921 [Oryza sativa Indica Group]
 gi|241915590|gb|EER88734.1| hypothetical protein SORBIDRAFT_10g025670 [Sorghum bicolor]
          Length = 153

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 82/148 (55%), Gaps = 3/148 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L     I VKT  GK I +D++P +T+  +K ++ +K   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLA 357
           +AGK+L ++     YNI+  S LH+VLA
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLA 148



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/138 (38%), Positives = 76/138 (55%), Gaps = 6/138 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSS----RIIELPLIFIDPSISLSISISEVKEMAKVK--FQAAVKELL 399
           IQK STLH+VL        ++  L    I+  I  + +I  +KE  + K       + L+
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 400 VDQVALQDDRTLADYGMD 417
                L DD+T  DY ++
Sbjct: 121 YAGKQLADDKTAKDYNIE 138



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 80/147 (54%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +    I VK  TG+ + ++++ +  I  +K  V    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +IY GK+L D KT   Y+++   +L +
Sbjct: 119 LIYAGKQLADDKTAKDYNIEGGSVLHL 145



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/136 (38%), Positives = 74/136 (54%), Gaps = 3/136 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
               + VK  T +    ++  P  T+  IK  ++ KEGI   Q  L+Y GK L +D  T 
Sbjct: 75  GGTMIKVKTLTGKEIE-IDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADD-KTA 132

Query: 120 TSMNIKSESIIHLVFC 135
              NI+  S++HLV  
Sbjct: 133 KDYNIEGGSVLHLVLA 148



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 72/143 (50%), Gaps = 3/143 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +         I V+T   + + +++E    +  +KE V     +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVL 279
           YAG +L   KT   Y I+   VL
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVL 143


>gi|88192954|pdb|2FCS|A Chain A, X-Ray Crystal Structure Of A Chemically Synthesized
           [l-Gln35]ubiquitin With A Cubic Space Group
 gi|88192955|pdb|2FCS|B Chain B, X-Ray Crystal Structure Of A Chemically Synthesized
           [l-Gln35]ubiquitin With A Cubic Space Group
          Length = 76

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/71 (56%), Positives = 53/71 (74%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK Q P   Q ++FAGK+L +   L+ YN
Sbjct: 1   LQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEQIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVL 356
           IQK STLH+VL
Sbjct: 61  IQKESTLHLVL 71



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 2/73 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           +++FVK  T +T T+ E  P  T++N+K  IQ KE I  DQ  L++ GK L ED  T++ 
Sbjct: 1   LQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEQIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVF 134
            NI+ ES +HLV 
Sbjct: 59  YNIQKESTLHLVL 71



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 41/69 (59%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           L IFVK  TG+ + LEV+ S  I +VKA +     +      +I+ GK+LED +TL+ Y+
Sbjct: 1   LQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEQIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM 208
           ++ E  L +
Sbjct: 61  IQKESTLHL 69



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1  MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
          ++V+ S+ I+N+KA I  KE I  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 15 LEVEPSDTIENVKAKIQDKEQIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70



 Score = 39.3 bits (90), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 36/67 (53%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   LQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEQIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVL 279
           I+    L
Sbjct: 61  IQKESTL 67


>gi|339245885|ref|XP_003374576.1| ubiquitin family protein [Trichinella spiralis]
 gi|316972173|gb|EFV55861.1| ubiquitin family protein [Trichinella spiralis]
          Length = 214

 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/88 (51%), Positives = 58/88 (65%)

Query: 280 DVLPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENH 339
           D +    QIFVKT  GKTITL+V+P +T+Q+VK K+ DK   P   Q ++FAGK+L +  
Sbjct: 65  DHIKRKMQIFVKTLTGKTITLEVEPSDTIQNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 124

Query: 340 VLARYNIQKHSTLHMVLAPSSRIIELPL 367
            L+ YNIQK STLH+VL     IIE  L
Sbjct: 125 TLSDYNIQKESTLHLVLRLRGGIIEPSL 152



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/74 (47%), Positives = 48/74 (64%), Gaps = 2/74 (2%)

Query: 61  EMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMT 120
           +M++FVK  T +T T+ E  P  T+QN+K  IQ KEGI  DQ  L++ GK L ED  T++
Sbjct: 70  KMQIFVKTLTGKTITL-EVEPSDTIQNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLS 127

Query: 121 SMNIKSESIIHLVF 134
             NI+ ES +HLV 
Sbjct: 128 DYNIQKESTLHLVL 141



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 44/72 (61%)

Query: 137 KEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLA 196
           K  + IFVK  TG+ + LEV+ S  I++VKA +    G+      +I+ GK+LED +TL+
Sbjct: 68  KRKMQIFVKTLTGKTITLEVEPSDTIQNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 127

Query: 197 FYDMKDECLLEM 208
            Y+++ E  L +
Sbjct: 128 DYNIQKESTLHL 139



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 85  LEVEPSDTIQNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 140



 Score = 38.1 bits (87), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 37/67 (55%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    +++VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 71  MQIFVKTLTGKTITLEVEPSDTIQNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 130

Query: 273 IKNNYVL 279
           I+    L
Sbjct: 131 IQKESTL 137


>gi|225465030|ref|XP_002265864.1| PREDICTED: ubiquitin-NEDD8-like protein RUB2 [Vitis vinifera]
 gi|297736166|emb|CBI24204.3| unnamed protein product [Vitis vinifera]
          Length = 155

 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 82/148 (55%), Gaps = 3/148 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L     I VKT  GK I +D++P +T+  +K ++ +K   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLA 357
           +AGK+L ++     YNI+  S LH+VLA
Sbjct: 121 YAGKQLGDDKTARDYNIEGGSVLHLVLA 148



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/138 (38%), Positives = 76/138 (55%), Gaps = 6/138 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSS----RIIELPLIFIDPSISLSISISEVKEMAKVK--FQAAVKELL 399
           IQK STLH+VL        ++  L    I+  I  + +I  +KE  + K       + L+
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 400 VDQVALQDDRTLADYGMD 417
                L DD+T  DY ++
Sbjct: 121 YAGKQLGDDKTARDYNIE 138



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 80/147 (54%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +    I VK  TG+ + ++++ +  I  +K  V    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +IY GK+L D KT   Y+++   +L +
Sbjct: 119 LIYAGKQLGDDKTARDYNIEGGSVLHL 145



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/136 (38%), Positives = 74/136 (54%), Gaps = 3/136 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
               + VK  T +    ++  P  T+  IK  ++ KEGI   Q  L+Y GK L +D  T 
Sbjct: 75  GGTMIKVKTLTGKEIE-IDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLGDD-KTA 132

Query: 120 TSMNIKSESIIHLVFC 135
              NI+  S++HLV  
Sbjct: 133 RDYNIEGGSVLHLVLA 148



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 72/143 (50%), Gaps = 3/143 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +         I V+T   + + +++E    +  +KE V     +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVL 279
           YAG +L   KT   Y I+   VL
Sbjct: 121 YAGKQLGDDKTARDYNIEGGSVL 143


>gi|158187894|gb|ABW23236.1| ribosomal protein rpl40 [Eurythoe complanata]
          Length = 128

 Score = 84.0 bits (206), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 44/81 (54%), Positives = 56/81 (69%)

Query: 287 QIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNI 346
           QIFVKT  GKTITLDV+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNI
Sbjct: 2   QIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

Query: 347 QKHSTLHMVLAPSSRIIELPL 367
           QK STLH+VL     IIE  L
Sbjct: 62  QKESTLHLVLRLRGGIIEPSL 82



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/73 (45%), Positives = 47/73 (64%), Gaps = 2/73 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-DVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVF 134
            NI+ ES +HLV 
Sbjct: 59  YNIQKESTLHLVL 71



 Score = 50.4 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/69 (36%), Positives = 42/69 (60%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + L+V+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM 208
           ++ E  L +
Sbjct: 61  IQKESTLHL 69



 Score = 50.1 bits (118), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1  MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
          + V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 15 LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70


>gi|115479211|ref|NP_001063199.1| Os09g0420800 [Oryza sativa Japonica Group]
 gi|242044708|ref|XP_002460225.1| hypothetical protein SORBIDRAFT_02g024880 [Sorghum bicolor]
 gi|357158453|ref|XP_003578133.1| PREDICTED: ubiquitin-NEDD8-like protein RUB1-like [Brachypodium
           distachyon]
 gi|302393765|sp|P0C030.2|RUB1_ORYSJ RecName: Full=Ubiquitin-NEDD8-like protein RUB1; Contains: RecName:
           Full=Ubiquitin; Contains: RecName: Full=NEDD8-like
           protein RUB1; AltName: Full=OsRUB1; AltName:
           Full=Ubiquitin-related protein 1; Flags: Precursor
 gi|50725971|dbj|BAD33498.1| polyubiquitin 2 [Oryza sativa Japonica Group]
 gi|50726105|dbj|BAD33626.1| polyubiquitin 2 [Oryza sativa Japonica Group]
 gi|113631432|dbj|BAF25113.1| Os09g0420800 [Oryza sativa Japonica Group]
 gi|125563747|gb|EAZ09127.1| hypothetical protein OsI_31396 [Oryza sativa Indica Group]
 gi|215704536|dbj|BAG94169.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|241923602|gb|EER96746.1| hypothetical protein SORBIDRAFT_02g024880 [Sorghum bicolor]
 gi|326513616|dbj|BAJ87827.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 153

 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 82/148 (55%), Gaps = 3/148 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L     I VKT  GK I +D++P +T+  +K ++ +K   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLA 357
           +AGK+L ++     YNI+  S LH+VLA
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLA 148



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/138 (38%), Positives = 76/138 (55%), Gaps = 6/138 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSS----RIIELPLIFIDPSISLSISISEVKEMAKVK--FQAAVKELL 399
           IQK STLH+VL        ++  L    I+  I  + +I  +KE  + K       + L+
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 400 VDQVALQDDRTLADYGMD 417
                L DD+T  DY ++
Sbjct: 121 YAGKQLADDKTAKDYNIE 138



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 80/147 (54%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +    I VK  TG+ + ++++ +  I  +K  V    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +IY GK+L D KT   Y+++   +L +
Sbjct: 119 LIYAGKQLADDKTAKDYNIEGGSVLHL 145



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/136 (38%), Positives = 74/136 (54%), Gaps = 3/136 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
               + VK  T +    ++  P  T+  IK  ++ KEGI   Q  L+Y GK L +D  T 
Sbjct: 75  GGTMIKVKTLTGKEIE-IDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADD-KTA 132

Query: 120 TSMNIKSESIIHLVFC 135
              NI+  S++HLV  
Sbjct: 133 KDYNIEGGSVLHLVLA 148



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 72/143 (50%), Gaps = 3/143 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +         I V+T   + + +++E    +  +KE V     +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVL 279
           YAG +L   KT   Y I+   VL
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVL 143


>gi|426387866|ref|XP_004060383.1| PREDICTED: ubiquitin-60S ribosomal protein L40 isoform 11 [Gorilla
           gorilla gorilla]
          Length = 158

 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/86 (51%), Positives = 58/86 (67%)

Query: 282 LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVL 341
           L +  QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L
Sbjct: 27  LDANMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 86

Query: 342 ARYNIQKHSTLHMVLAPSSRIIELPL 367
           + YNIQK STLH+VL     IIE  L
Sbjct: 87  SDYNIQKESTLHLVLRLRGGIIEPSL 112



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 6/103 (5%)

Query: 36  LEAGRLVDYGIRNNSTL----HFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTM 91
           + AGR    G   ++       F  +  + M++FVK  T +T T+ E  P  T++N+K  
Sbjct: 1   MAAGRGPRRGANCDAACSVRKRFRRRLDANMQIFVKTLTGKTITL-EVEPSDTIENVKAK 59

Query: 92  IQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVF 134
           IQ KEGI  DQ  L++ GK L ED  T++  NI+ ES +HLV 
Sbjct: 60  IQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVL 101



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 42/69 (60%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 31  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 90

Query: 200 MKDECLLEM 208
           ++ E  L +
Sbjct: 91  IQKESTLHL 99



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 45  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 100



 Score = 38.9 bits (89), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 38/69 (55%)

Query: 211 SSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLAS 270
           +++QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ 
Sbjct: 29  ANMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 88

Query: 271 YGIKNNYVL 279
           Y I+    L
Sbjct: 89  YNIQKESTL 97


>gi|7862066|gb|AAF70460.1|AF240445_1 polyubiquitin [Populus tremula x Populus tremuloides]
          Length = 154

 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 82/148 (55%), Gaps = 3/148 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDAIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L     I VKT  GK I +D++P +T+  +K ++ +K   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLA 357
           +AGK+L ++     YNI+  S LH+VLA
Sbjct: 121 YAGKQLGDDKTARDYNIEGGSVLHLVLA 148



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/138 (37%), Positives = 75/138 (54%), Gaps = 6/138 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  + + +VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDAIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSS----RIIELPLIFIDPSISLSISISEVKEMAKVK--FQAAVKELL 399
           IQK STLH+VL        ++  L    I+  I  + +I  +KE  + K       + L+
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 400 VDQVALQDDRTLADYGMD 417
                L DD+T  DY ++
Sbjct: 121 YAGKQLGDDKTARDYNIE 138



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/136 (38%), Positives = 74/136 (54%), Gaps = 3/136 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDAIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
               + VK  T +    ++  P  T+  IK  ++ KEGI   Q  L+Y GK L +D  T 
Sbjct: 75  GGTMIKVKTLTGKEIE-IDIEPNDTIDRIKERVEEKEGIPPVQQRLIYAGKQLGDD-KTA 132

Query: 120 TSMNIKSESIIHLVFC 135
              NI+  S++HLV  
Sbjct: 133 RDYNIEGGSVLHLVLA 148



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 51/147 (34%), Positives = 79/147 (53%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E      + N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDAIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +    I VK  TG+ + ++++ +  I  +K  V    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +IY GK+L D KT   Y+++   +L +
Sbjct: 119 LIYAGKQLGDDKTARDYNIEGGSVLHL 145



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 73/143 (51%), Gaps = 3/143 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S AI +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDAIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +         I V+T   + + +++E    +  +KE V     +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVL 279
           YAG +L   KT   Y I+   VL
Sbjct: 121 YAGKQLGDDKTARDYNIEGGSVL 143


>gi|226532866|ref|NP_001148606.1| LOC100282222 [Zea mays]
 gi|194700092|gb|ACF84130.1| unknown [Zea mays]
 gi|195619630|gb|ACG31645.1| polyubiquitin 2 [Zea mays]
 gi|195620202|gb|ACG31931.1| polyubiquitin 2 [Zea mays]
 gi|195620238|gb|ACG31949.1| polyubiquitin 2 [Zea mays]
 gi|195620732|gb|ACG32196.1| polyubiquitin 2 [Zea mays]
 gi|195620942|gb|ACG32301.1| polyubiquitin 2 [Zea mays]
 gi|195628320|gb|ACG35990.1| polyubiquitin 2 [Zea mays]
 gi|414885492|tpg|DAA61506.1| TPA: polyubiquitin 2 isoform 1 [Zea mays]
 gi|414885493|tpg|DAA61507.1| TPA: polyubiquitin 2 isoform 2 [Zea mays]
          Length = 153

 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/138 (39%), Positives = 76/138 (55%), Gaps = 6/138 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +TV +VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTVDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSS----RIIELPLIFIDPSISLSISISEVKEMAKVK--FQAAVKELL 399
           IQK STLH+VL        ++  L    I+  I  + SI  +KE  + K       + L+
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDSIDRIKERVEEKEGIPPVQQRLI 120

Query: 400 VDQVALQDDRTLADYGMD 417
                L DD+T  DY ++
Sbjct: 121 YAGKQLADDKTAKDYNIE 138



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 82/148 (55%), Gaps = 3/148 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    V +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTVDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L     I VKT  GK I +D++P +++  +K ++ +K   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDSIDRIKERVEEKEGIPPVQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLA 357
           +AGK+L ++     YNI+  S LH+VLA
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLA 148



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/147 (36%), Positives = 81/147 (55%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     TV N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTVDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +    I VK  TG+ + ++++ + +I  +K  V    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDSIDRIKERVEEKEGIPPVQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +IY GK+L D KT   Y+++   +L +
Sbjct: 119 LIYAGKQLADDKTAKDYNIEGGSVLHL 145



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 51/136 (37%), Positives = 74/136 (54%), Gaps = 3/136 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ + N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTVDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
               + VK  T +    ++  P  ++  IK  ++ KEGI   Q  L+Y GK L +D  T 
Sbjct: 75  GGTMIKVKTLTGKEIE-IDIEPTDSIDRIKERVEEKEGIPPVQQRLIYAGKQLADD-KTA 132

Query: 120 TSMNIKSESIIHLVFC 135
              NI+  S++HLV  
Sbjct: 133 KDYNIEGGSVLHLVLA 148



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 72/143 (50%), Gaps = 3/143 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  + +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTVDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +         I V+T   + + +++E    +  +KE V     +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDSIDRIKERVEEKEGIPPVQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVL 279
           YAG +L   KT   Y I+   VL
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVL 143


>gi|255544634|ref|XP_002513378.1| ubiquitin, putative [Ricinus communis]
 gi|223547286|gb|EEF48781.1| ubiquitin, putative [Ricinus communis]
          Length = 154

 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 82/148 (55%), Gaps = 3/148 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L     I VKT  GK I +D++P +T+  +K ++ +K   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLA 357
           +AGK+L ++     YNI+  S LH+VLA
Sbjct: 121 YAGKQLGDDKTARDYNIEGGSVLHLVLA 148



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/138 (38%), Positives = 76/138 (55%), Gaps = 6/138 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSS----RIIELPLIFIDPSISLSISISEVKEMAKVK--FQAAVKELL 399
           IQK STLH+VL        ++  L    I+  I  + +I  +KE  + K       + L+
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 400 VDQVALQDDRTLADYGMD 417
                L DD+T  DY ++
Sbjct: 121 YAGKQLGDDKTARDYNIE 138



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 80/147 (54%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +    I VK  TG+ + ++++ +  I  +K  V    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +IY GK+L D KT   Y+++   +L +
Sbjct: 119 LIYAGKQLGDDKTARDYNIEGGSVLHL 145



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/136 (38%), Positives = 74/136 (54%), Gaps = 3/136 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
               + VK  T +    ++  P  T+  IK  ++ KEGI   Q  L+Y GK L +D  T 
Sbjct: 75  GGTMIKVKTLTGKEIE-IDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLGDD-KTA 132

Query: 120 TSMNIKSESIIHLVFC 135
              NI+  S++HLV  
Sbjct: 133 RDYNIEGGSVLHLVLA 148



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 72/143 (50%), Gaps = 3/143 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +         I V+T   + + +++E    +  +KE V     +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVL 279
           YAG +L   KT   Y I+   VL
Sbjct: 121 YAGKQLGDDKTARDYNIEGGSVL 143


>gi|30692436|ref|NP_564379.2| NEDD8-like protein RUB1 [Arabidopsis thaliana]
 gi|302393813|sp|Q9SHE7.3|RUB1_ARATH RecName: Full=Ubiquitin-NEDD8-like protein RUB1; Contains: RecName:
           Full=Ubiquitin; Contains: RecName: Full=NEDD8-like
           protein RUB1; AltName: Full=Ubiquitin-related protein 1;
           Short=AtRUB1; Flags: Precursor
 gi|6692129|gb|AAF24594.1|AC007654_10 T19E23.13 [Arabidopsis thaliana]
 gi|28973676|gb|AAO64156.1| putative ubiquitin (AtRUB1) [Arabidopsis thaliana]
 gi|29824269|gb|AAP04095.1| putative ubiquitin (AtRUB1) [Arabidopsis thaliana]
 gi|110737109|dbj|BAF00506.1| putative ubiquitin [Arabidopsis thaliana]
 gi|312283039|dbj|BAJ34385.1| unnamed protein product [Thellungiella halophila]
 gi|332193223|gb|AEE31344.1| NEDD8-like protein RUB1 [Arabidopsis thaliana]
          Length = 156

 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 82/148 (55%), Gaps = 3/148 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L     I VKT  GK I +D++P +T+  +K ++ +K   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLA 357
           +AGK+L ++     YNI+  S LH+VLA
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLA 148



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 53/138 (38%), Positives = 76/138 (55%), Gaps = 6/138 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSS----RIIELPLIFIDPSISLSISISEVKEMAKVK--FQAAVKELL 399
           IQK STLH+VL        ++  L    I+  I  + +I  +KE  + K       + L+
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 400 VDQVALQDDRTLADYGMD 417
                L DD+T  DY ++
Sbjct: 121 YAGKQLADDKTAKDYNIE 138



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 80/147 (54%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +    I VK  TG+ + ++++ +  I  +K  V    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +IY GK+L D KT   Y+++   +L +
Sbjct: 119 LIYAGKQLADDKTAKDYNIEGGSVLHL 145



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/136 (38%), Positives = 74/136 (54%), Gaps = 3/136 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
               + VK  T +    ++  P  T+  IK  ++ KEGI   Q  L+Y GK L +D  T 
Sbjct: 75  GGTMIKVKTLTGKEIE-IDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADD-KTA 132

Query: 120 TSMNIKSESIIHLVFC 135
              NI+  S++HLV  
Sbjct: 133 KDYNIEGGSVLHLVLA 148



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 72/143 (50%), Gaps = 3/143 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +         I V+T   + + +++E    +  +KE V     +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVL 279
           YAG +L   KT   Y I+   VL
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVL 143


>gi|554564|gb|AAA72502.1| beta-galactosidase/ubiquitin fusion protein, partial [synthetic
           construct]
          Length = 106

 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 56/82 (68%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 6   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 65

Query: 346 IQKHSTLHMVLAPSSRIIELPL 367
           IQK STLH+VL     IIE  L
Sbjct: 66  IQKESTLHLVLRLRGGIIEPSL 87



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 2/75 (2%)

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
           + M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 4   ANMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 61

Query: 120 TSMNIKSESIIHLVF 134
           +  NI+ ES +HLV 
Sbjct: 62  SDYNIQKESTLHLVL 76



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 42/69 (60%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 6   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 65

Query: 200 MKDECLLEM 208
           ++ E  L +
Sbjct: 66  IQKESTLHL 74



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1  MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
          ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 20 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 75



 Score = 41.2 bits (95), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 39/71 (54%)

Query: 209 FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTL 268
           F +++QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL
Sbjct: 2   FRANMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 61

Query: 269 ASYGIKNNYVL 279
           + Y I+    L
Sbjct: 62  SDYNIQKESTL 72


>gi|224066593|ref|XP_002302153.1| predicted protein [Populus trichocarpa]
 gi|224082516|ref|XP_002306725.1| predicted protein [Populus trichocarpa]
 gi|118485172|gb|ABK94447.1| unknown [Populus trichocarpa]
 gi|222843879|gb|EEE81426.1| predicted protein [Populus trichocarpa]
 gi|222856174|gb|EEE93721.1| predicted protein [Populus trichocarpa]
          Length = 154

 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 82/148 (55%), Gaps = 3/148 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L     I VKT  GK I +D++P +T+  +K ++ +K   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLA 357
           +AGK+L ++     YNI+  S LH+VLA
Sbjct: 121 YAGKQLGDDKTARDYNIEGGSVLHLVLA 148



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/138 (38%), Positives = 76/138 (55%), Gaps = 6/138 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSS----RIIELPLIFIDPSISLSISISEVKEMAKVK--FQAAVKELL 399
           IQK STLH+VL        ++  L    I+  I  + +I  +KE  + K       + L+
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 400 VDQVALQDDRTLADYGMD 417
                L DD+T  DY ++
Sbjct: 121 YAGKQLGDDKTARDYNIE 138



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 80/147 (54%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +    I VK  TG+ + ++++ +  I  +K  V    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +IY GK+L D KT   Y+++   +L +
Sbjct: 119 LIYAGKQLGDDKTARDYNIEGGSVLHL 145



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/136 (38%), Positives = 74/136 (54%), Gaps = 3/136 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
               + VK  T +    ++  P  T+  IK  ++ KEGI   Q  L+Y GK L +D  T 
Sbjct: 75  GGTMIKVKTLTGKEIE-IDIEPNDTIDRIKERVEEKEGIPPVQQRLIYAGKQLGDD-KTA 132

Query: 120 TSMNIKSESIIHLVFC 135
              NI+  S++HLV  
Sbjct: 133 RDYNIEGGSVLHLVLA 148



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 72/143 (50%), Gaps = 3/143 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +         I V+T   + + +++E    +  +KE V     +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVL 279
           YAG +L   KT   Y I+   VL
Sbjct: 121 YAGKQLGDDKTARDYNIEGGSVL 143


>gi|449444274|ref|XP_004139900.1| PREDICTED: ubiquitin-NEDD8-like protein RUB1-like [Cucumis sativus]
 gi|449532435|ref|XP_004173186.1| PREDICTED: ubiquitin-NEDD8-like protein RUB1-like [Cucumis sativus]
          Length = 154

 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 82/148 (55%), Gaps = 3/148 (2%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L     I VKT  GK I +D++P +T+  +K ++ +K   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLA 357
           +AGK+L ++     YNI+  S LH+VLA
Sbjct: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLA 148



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/138 (38%), Positives = 76/138 (55%), Gaps = 6/138 (4%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 346 IQKHSTLHMVLAPSS----RIIELPLIFIDPSISLSISISEVKEMAKVK--FQAAVKELL 399
           IQK STLH+VL        ++  L    I+  I  + +I  +KE  + K       + L+
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 400 VDQVALQDDRTLADYGMD 417
                L DD+T  DY ++
Sbjct: 121 YAGKQLGDDKTAKDYNIE 138



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 80/147 (54%), Gaps = 2/147 (1%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +    I VK  TG+ + ++++ +  I  +K  V    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +IY GK+L D KT   Y+++   +L +
Sbjct: 119 LIYAGKQLGDDKTAKDYNIEGGSVLHL 145



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/136 (38%), Positives = 74/136 (54%), Gaps = 3/136 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
               + VK  T +    ++  P  T+  IK  ++ KEGI   Q  L+Y GK L +D  T 
Sbjct: 75  GGTMIKVKTLTGKEIE-IDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLGDD-KTA 132

Query: 120 TSMNIKSESIIHLVFC 135
              NI+  S++HLV  
Sbjct: 133 KDYNIEGGSVLHLVLA 148



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 72/143 (50%), Gaps = 3/143 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +         I V+T   + + +++E    +  +KE V     +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVL 279
           YAG +L   KT   Y I+   VL
Sbjct: 121 YAGKQLGDDKTAKDYNIEGGSVL 143


>gi|92790168|emb|CAI83753.1| Polyubiqutin 1 [Metadinium medium]
          Length = 83

 Score = 83.6 bits (205), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/70 (60%), Positives = 53/70 (75%)

Query: 287 QIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNI 346
           QIFVKT  GKTITLDV+P +T+++VK K+ DK   P   Q ++FAGK+L +N  LA YNI
Sbjct: 8   QIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNI 67

Query: 347 QKHSTLHMVL 356
           QK STLH+VL
Sbjct: 68  QKESTLHLVL 77



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 2/73 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 7   MQIFVKTLTGKTITL-DVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLAD 64

Query: 122 MNIKSESIIHLVF 134
            NI+ ES +HLV 
Sbjct: 65  YNIQKESTLHLVL 77



 Score = 51.2 bits (121), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/69 (37%), Positives = 43/69 (62%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + L+V+ S  I +VKA +    G+      +I+ GK+LED++TLA Y+
Sbjct: 7   MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYN 66

Query: 200 MKDECLLEM 208
           ++ E  L +
Sbjct: 67  IQKESTLHL 75



 Score = 47.0 bits (110), Expect = 0.016,   Method: Composition-based stats.
 Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 1/56 (1%)

Query: 1  MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
          + V+ S+ I+N+KA I  KEGI  D   L FAG +LE  R L DY I+  STLH +
Sbjct: 21 LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLV 76


>gi|288812763|gb|ADC54275.1| putative ubiquitin [Hydroides elegans]
          Length = 90

 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/79 (53%), Positives = 55/79 (69%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIE 364
           IQK STLH+VL     IIE
Sbjct: 61  IQKESTLHLVLRLRGGIIE 79



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/73 (46%), Positives = 47/73 (64%), Gaps = 2/73 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVF 134
            NI+ ES +HLV 
Sbjct: 59  YNIQKESTLHLVL 71



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 42/69 (60%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM 208
           ++ E  L +
Sbjct: 61  IQKESTLHL 69



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1  MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
          ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 15 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70



 Score = 38.5 bits (88), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 36/67 (53%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVL 279
           I+    L
Sbjct: 61  IQKESTL 67


>gi|395513211|ref|XP_003760822.1| PREDICTED: ubiquitin-60S ribosomal protein L40 [Sarcophilus
           harrisii]
          Length = 182

 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 56/82 (68%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 55  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 114

Query: 346 IQKHSTLHMVLAPSSRIIELPL 367
           IQK STLH+VL     IIE  L
Sbjct: 115 IQKESTLHLVLRLRGGIIEPSL 136



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 2/92 (2%)

Query: 43  DYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQ 102
           D G +         ++++EM++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ
Sbjct: 36  DRGRQRGQEHEASGRSVAEMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQ 94

Query: 103 FTLVYDGKLLKEDTATMTSMNIKSESIIHLVF 134
             L++ GK L ED  T++  NI+ ES +HLV 
Sbjct: 95  QRLIFAGKQL-EDGRTLSDYNIQKESTLHLVL 125



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 42/69 (60%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 55  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 114

Query: 200 MKDECLLEM 208
           ++ E  L +
Sbjct: 115 IQKESTLHL 123



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 69  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 124



 Score = 38.5 bits (88), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 39/72 (54%)

Query: 211 SSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLAS 270
           + +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ 
Sbjct: 53  AEMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 112

Query: 271 YGIKNNYVLDVL 282
           Y I+    L ++
Sbjct: 113 YNIQKESTLHLV 124


>gi|463367|gb|AAA21454.1| ubiquitin, partial [Ammonia beccarii]
          Length = 76

 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/71 (56%), Positives = 52/71 (73%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  G+TITLDV+P +T+Q+VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTXTGRTITLDVEPNDTIQNVKAKIQDKEGIPPEQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVL 356
           IQK STLH+VL
Sbjct: 61  IQKESTLHLVL 71



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/73 (45%), Positives = 47/73 (64%), Gaps = 2/73 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ +  P  T+QN+K  IQ KEGI  +Q  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTXTGRTITL-DVEPNDTIQNVKAKIQDKEGIPPEQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVF 134
            NI+ ES +HLV 
Sbjct: 59  YNIQKESTLHLVL 71



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 42/69 (60%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG  + L+V+ +  I++VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTXTGRTITLDVEPNDTIQNVKAKIQDKEGIPPEQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM 208
           ++ E  L +
Sbjct: 61  IQKESTLHL 69



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1  MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
          + V+ ++ I+N+KA I  KEGI  +   L FAG +LE GR L DY I+  STLH +
Sbjct: 15 LDVEPNDTIQNVKAKIQDKEGIPPEQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70


>gi|164510088|emb|CAJ32648.1| ubiquitin [Chorocaris chacei]
          Length = 76

 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/71 (56%), Positives = 53/71 (74%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   QS++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQSLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVL 356
           IQK STLH+VL
Sbjct: 61  IQKESTLHLVL 71



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 34/73 (46%), Positives = 48/73 (65%), Gaps = 2/73 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ +L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQSLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVF 134
            NI+ ES +HLV 
Sbjct: 59  YNIQKESTLHLVL 71



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 42/69 (60%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQSLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM 208
           ++ E  L +
Sbjct: 61  IQKESTLHL 69



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1  MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
          ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 15 LEVEPSDTIENVKAKIQDKEGIPPDQQSLIFAGKQLEDGRTLSDYNIQKESTLHLV 70



 Score = 39.7 bits (91), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 36/67 (53%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQSLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVL 279
           I+    L
Sbjct: 61  IQKESTL 67


>gi|296415756|ref|XP_002837552.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295633424|emb|CAZ81743.1| unnamed protein product [Tuber melanosporum]
          Length = 205

 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/147 (36%), Positives = 80/147 (54%), Gaps = 19/147 (12%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LE                  G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE-----------------EGIPPDQQR 101

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM 208
           +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 102 LIFAGKQLEDGRTLSDYNIQKESTLHL 128



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/159 (35%), Positives = 80/159 (50%), Gaps = 25/159 (15%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+                    P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEEG-----------------IPPDQQRLI 103

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVL-----APSSRII 363
           FAGK+L +   L+ YNIQK STLH+VL     AP  +I 
Sbjct: 104 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAPKKKIC 142



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 54/141 (38%), Positives = 78/141 (55%), Gaps = 11/141 (7%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 346 IQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAAVKELLVDQVAL 405
           IQK STLH+VL    R+     IF+      +I++ E     + +   A K+       L
Sbjct: 61  IQKESTLHLVL----RLRGGMQIFVKTLTGKTITLEEGIPPDQQRLIFAGKQ-------L 109

Query: 406 QDDRTLADYGMDLSEKVVLVF 426
           +D RTL+DY +     + LV 
Sbjct: 110 EDGRTLSDYNIQKESTLHLVL 130



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 96/206 (46%), Gaps = 37/206 (17%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E +P                   DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITLEEGIP------------------PDQQRLIFAGKQL-EDGRTL 115

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV      L +   A   +I N +   + A R    IVG         
Sbjct: 116 SDYNIQKESTLHLV------LRLRGGAPKKKICNFKECTTPAQR----IVGDCRFCDGH- 164

Query: 180 HIMIYEGKK--LEDSKTLAFYDMKDE 203
               Y GK   LED K     D + E
Sbjct: 165 ----YCGKHRLLEDHKCSGLEDCRKE 186



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 20/143 (13%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK+ +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LE  +                     Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEEGI-----------------PPDQQRLI 103

Query: 257 YAGTKLEACKTLASYGIKNNYVL 279
           +AG +LE  +TL+ Y I+    L
Sbjct: 104 FAGKQLEDGRTLSDYNIQKESTL 126


>gi|317055545|ref|YP_004104012.1| ubiquitin [Ruminococcus albus 7]
 gi|315447814|gb|ADU21378.1| ubiquitin [Ruminococcus albus 7]
          Length = 264

 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/71 (54%), Positives = 53/71 (74%)

Query: 286 FQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYN 345
            QIFVKT  GKTITL+V+P +T+++VK K+ DK     + Q ++FAGK+L ++  LA YN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKESIAPNKQRLIFAGKQLEDDRTLADYN 60

Query: 346 IQKHSTLHMVL 356
           IQK STLH+VL
Sbjct: 61  IQKESTLHLVL 71



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KE I  ++  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKESIAPNKQRLIFAGKQL-EDDRTLAD 58

Query: 122 MNIKSESIIHLVF 134
            NI+ ES +HLV 
Sbjct: 59  YNIQKESTLHLVL 71



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 42/69 (60%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +     ++     +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKESIAPNKQRLIFAGKQLEDDRTLADYN 60

Query: 200 MKDECLLEM 208
           ++ E  L +
Sbjct: 61  IQKESTLHL 69



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 66/139 (47%), Gaps = 16/139 (11%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   ++   Q L +AG +LE  +TLA Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKESIAPNKQRLIFAGKQLEDDRTLADYN 60

Query: 273 I----------KNNYVLDVLPSPFQIFV--KTWGGKTITLDVQP-YNTVQDVKVKLFDKL 319
           I          + N+ ++++P P  +     +  G  ++ DV P Y+ V    V L D  
Sbjct: 61  IQKESTLHLVLRANWDIEIVPDPENMPTPKPSTAGMEVSYDVSPTYSVVIPASVSLSDTA 120

Query: 320 QTPLHLQSIVFAGKRLFEN 338
           +T    + I     RL +N
Sbjct: 121 ET---TRQITATDVRLAQN 136



 Score = 45.8 bits (107), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1  MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
          ++V+ S+ I+N+KA I  KE I+ +   L FAG +LE  R L DY I+  STLH +
Sbjct: 15 LEVEPSDTIENVKAKIQDKESIAPNKQRLIFAGKQLEDDRTLADYNIQKESTLHLV 70


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.321    0.137    0.378 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,838,758,902
Number of Sequences: 23463169
Number of extensions: 227369476
Number of successful extensions: 605624
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3250
Number of HSP's successfully gapped in prelim test: 420
Number of HSP's that attempted gapping in prelim test: 561472
Number of HSP's gapped (non-prelim): 18373
length of query: 426
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 281
effective length of database: 8,957,035,862
effective search space: 2516927077222
effective search space used: 2516927077222
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 78 (34.7 bits)