BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 036691
         (426 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P0CG68|UBC_PIG Polyubiquitin-C OS=Sus scrofa GN=UBC PE=2 SV=1
          Length = 533

 Score =  261 bits (666), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  259 bits (663), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 166/439 (37%), Positives = 245/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKGKIQEKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  217 bits (553), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKGKIQEKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>sp|P0CH28|UBC_BOVIN Polyubiquitin-C OS=Bos taurus GN=UBC PE=1 SV=1
          Length = 690

 Score =  261 bits (666), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  261 bits (666), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  261 bits (666), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYNIQKESTLHLVL 679



 Score =  259 bits (663), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 166/439 (37%), Positives = 245/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKGKIQEKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  252 bits (643), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 151/373 (40%), Positives = 221/373 (59%), Gaps = 9/373 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 319 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 379 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 436

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 437 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 496

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 497 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 556

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 616

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 617 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 676

Query: 354 MVLAPSSRIIELP 366
           +VL     ++  P
Sbjct: 677 LVLRLRGGVLSSP 689



 Score =  217 bits (552), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKGKIQEKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>sp|P0CG61|UBC_PONPY Polyubiquitin-C OS=Pongo pygmaeus GN=UBC PE=3 SV=1
          Length = 761

 Score =  261 bits (666), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  261 bits (666), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  261 bits (666), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  261 bits (666), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYNIQKESTLHLVL 679



 Score =  261 bits (666), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 319 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 379 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 436

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 437 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 496

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 497 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 556

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 616

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 617 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 676

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 677 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 736

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 737 GRTLSDYNIQKESTLHLVL 755



 Score =  217 bits (552), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>sp|P0CG64|UBC_PANTR Polyubiquitin-C OS=Pan troglodytes GN=UBC PE=3 SV=1
          Length = 761

 Score =  261 bits (666), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  261 bits (666), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  261 bits (666), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  261 bits (666), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYNIQKESTLHLVL 679



 Score =  261 bits (666), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 319 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 379 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 436

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 437 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 496

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 497 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 556

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 616

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 617 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 676

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 677 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 736

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 737 GRTLSDYNIQKESTLHLVL 755



 Score =  217 bits (552), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>sp|P0CG48|UBC_HUMAN Polyubiquitin-C OS=Homo sapiens GN=UBC PE=1 SV=3
          Length = 685

 Score =  261 bits (666), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  261 bits (666), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  261 bits (666), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  261 bits (666), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYNIQKESTLHLVL 679



 Score =  217 bits (552), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>sp|P0CG66|UBC_GORGO Polyubiquitin-C OS=Gorilla gorilla gorilla GN=UBC PE=3 SV=1
          Length = 609

 Score =  260 bits (665), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  260 bits (665), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  260 bits (665), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  217 bits (552), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>sp|Q63429|UBC_RAT Polyubiquitin-C OS=Rattus norvegicus GN=Ubc PE=1 SV=1
          Length = 810

 Score =  260 bits (665), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  260 bits (665), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  260 bits (665), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  260 bits (665), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYNIQKESTLHLVL 679



 Score =  260 bits (665), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 319 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 379 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 436

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 437 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 496

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 497 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 556

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 616

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 617 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 676

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 677 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 736

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 737 GRTLSDYNIQKESTLHLVL 755



 Score =  217 bits (552), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375



 Score =  202 bits (513), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 127/319 (39%), Positives = 185/319 (57%), Gaps = 9/319 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 471 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 530

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 531 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 588

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 589 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 648

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 649 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 708

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 709 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 768

Query: 294 GGKTITLDVQPYNTVQDVK 312
            GKTITL+V+P    + VK
Sbjct: 769 TGKTITLEVEPSVNTKKVK 787



 Score =  162 bits (410), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 99/244 (40%), Positives = 146/244 (59%), Gaps = 6/244 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 547 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 606

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 607 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 664

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 665 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 724

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE  +  +
Sbjct: 725 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSVNTK 784

Query: 237 DVKE 240
            VK+
Sbjct: 785 KVKQ 788


>sp|P0CG69|UBIQP_DROME Polyubiquitin OS=Drosophila melanogaster GN=Ubi-p63E PE=3 SV=1
          Length = 763

 Score =  260 bits (665), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  260 bits (665), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  260 bits (665), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  260 bits (665), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYNIQKESTLHLVL 679



 Score =  260 bits (665), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 319 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 379 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 436

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 437 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 496

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 497 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 556

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 616

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 617 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 676

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 677 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 736

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 737 GRTLSDYNIQKESTLHLVL 755



 Score =  217 bits (552), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>sp|P0CG50|UBC_MOUSE Polyubiquitin-C OS=Mus musculus GN=Ubc PE=1 SV=2
          Length = 734

 Score =  260 bits (665), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  260 bits (665), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  260 bits (665), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  260 bits (665), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYNIQKESTLHLVL 679



 Score =  216 bits (551), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375



 Score =  205 bits (522), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 129/319 (40%), Positives = 186/319 (58%), Gaps = 9/319 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 395 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 454

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 455 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 512

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 513 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 572

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 573 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 632

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 633 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 692

Query: 294 GGKTITLDVQPYNTVQDVK 312
            GKTITLDV+P  T + VK
Sbjct: 693 TGKTITLDVEPSVTTKKVK 711



 Score =  162 bits (409), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 98/244 (40%), Positives = 146/244 (59%), Gaps = 6/244 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 471 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 530

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 531 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 588

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 589 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 648

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE  +  +
Sbjct: 649 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVTTK 708

Query: 237 DVKE 240
            VK+
Sbjct: 709 KVKQ 712


>sp|P62976|UBIQP_CRIGR Polyubiquitin OS=Cricetulus griseus PE=2 SV=2
          Length = 658

 Score =  260 bits (664), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  260 bits (664), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  260 bits (664), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 246/439 (56%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKQGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  216 bits (551), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375



 Score =  206 bits (525), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 128/319 (40%), Positives = 187/319 (58%), Gaps = 9/319 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 319 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 379 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 436

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 437 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 496

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 497 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 556

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 557 NVKAKIQDKQGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 616

Query: 294 GGKTITLDVQPYNTVQDVK 312
            GKTITL+V+P NT++  K
Sbjct: 617 TGKTITLEVEPSNTIKKSK 635



 Score =  160 bits (404), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/244 (40%), Positives = 145/244 (59%), Gaps = 6/244 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 395 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 454

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 455 GGMQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 512

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 513 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKQGIPPDQ 572

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    ++
Sbjct: 573 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSNTIK 632

Query: 237 DVKE 240
             K+
Sbjct: 633 KSKQ 636


>sp|P0CG71|UBIQ1_CAEEL Polyubiquitin-A OS=Caenorhabditis elegans GN=ubq-1 PE=2 SV=1
          Length = 838

 Score =  257 bits (656), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 166/439 (37%), Positives = 245/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +       I  +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  257 bits (656), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 166/439 (37%), Positives = 245/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 167 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 227 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 284

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 344

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T I + + LEVE    + 
Sbjct: 345 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLIGKTITLEVEASDTIE 404

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 464

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 465 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 524

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 525 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 585 GRTLSDYNIQKESTLHLVL 603



 Score =  255 bits (651), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 395 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 454

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 455 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 512

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 513 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 572

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 573 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 632

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 633 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 692

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 693 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 752

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 753 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 812

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 813 GRTLSDYNIQKESTLHLVL 831



 Score =  253 bits (645), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 164/439 (37%), Positives = 243/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 243 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 303 GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 360

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK   G+ + LEV+ S  I +VKA +    G+    
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 420

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 421 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 480

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 540

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 541 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 600

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 601 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 661 GRTLSDYNIQKESTLHLVL 679



 Score =  253 bits (645), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 164/439 (37%), Positives = 243/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 319 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK    +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 379 GGMQIFVKTLIGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 436

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 437 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 496

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 497 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 556

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 616

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 617 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 676

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 677 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 736

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 737 GRTLSDYNIQKESTLHLVL 755



 Score =  211 bits (538), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 137/377 (36%), Positives = 206/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>sp|P59669|UBIQP_GEOCY Polyubiquitin OS=Geodia cydonium PE=2 SV=2
          Length = 457

 Score =  255 bits (652), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVVRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  162 bits (409), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 102/287 (35%), Positives = 155/287 (54%), Gaps = 12/287 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADY 414
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY
Sbjct: 241 ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 287



 Score =  119 bits (297), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 78/223 (34%), Positives = 117/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 180

Query: 390 KFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223


>sp|Q8H159|UBQ10_ARATH Polyubiquitin 10 OS=Arabidopsis thaliana GN=UBQ10 PE=1 SV=2
          Length = 457

 Score =  254 bits (650), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 433 GRTLADYNIQKESTLHLVL 451



 Score =  211 bits (536), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>sp|P0CG85|UBI1P_NICSY Polyubiquitin OS=Nicotiana sylvestris GN=UBI11 PE=2 SV=1
          Length = 457

 Score =  254 bits (650), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 433 GRTLADYNIQKESTLHLVL 451



 Score =  211 bits (536), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>sp|P0CH05|UBI2P_PETCR Polyubiquitin OS=Petroselinum crispum GN=PCUBI4-2 PE=3 SV=1
          Length = 458

 Score =  254 bits (649), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 433 GRTLADYNIQKESTLHLVL 451



 Score =  211 bits (536), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>sp|P0CH04|UBI1P_PETCR Polyubiquitin OS=Petroselinum crispum GN=PCUBI4-1 PE=2 SV=1
          Length = 458

 Score =  254 bits (649), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 168/439 (38%), Positives = 240/439 (54%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  +  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTLADY +     + LV 
Sbjct: 433 GRTLADYNIQKESTLHLVL 451



 Score =  211 bits (536), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>sp|P42740|UBIQP_AGLNE Polyubiquitin OS=Aglaothamnion neglectum PE=2 SV=2
          Length = 457

 Score =  249 bits (637), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 162/439 (36%), Positives = 242/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+K  I  KEGI  D   L FAG +LE GR L DY  +  STLH + +  
Sbjct: 15  LEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNNQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T++N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTITGKTITLEVESSDTIENVKTKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y ++    L +   L    QIFVKT 
Sbjct: 253 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNLQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  159 bits (402), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 103/299 (34%), Positives = 157/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
            + E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  NQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTITGKTITLEVESSDTIENVKT 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNLQKESTLHLVL 299


>sp|P0CG78|UBIQF_DICDI Polyubiquitin-F OS=Dictyostelium discoideum GN=ubqF PE=1 SV=1
          Length = 533

 Score =  247 bits (630), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 163/439 (37%), Positives = 242/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E      ++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  + +++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 373 LVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 433 GRTLSDYNIQKESTLHLVL 451



 Score =  247 bits (630), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 163/439 (37%), Positives = 242/439 (55%), Gaps = 15/439 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 91  LEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E      ++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 151 GGMQIFVKTLTGKTITL-EVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 208

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQ 268

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 269 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIE 328

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 388

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  + +++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 389 TGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 448

Query: 354 MVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQD 407
           +VL     +          +I+L +  S+  E  K K Q         + L+     L+D
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508

Query: 408 DRTLADYGMDLSEKVVLVF 426
            RTL+DY +     + LV 
Sbjct: 509 GRTLSDYNIQKESTLHLVL 527



 Score =  204 bits (519), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 135/377 (35%), Positives = 204/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E      ++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  + +++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>sp|P69322|UBIQP_PEA Polyubiquitin OS=Pisum sativum GN=PU1 PE=2 SV=2
          Length = 381

 Score =  245 bits (625), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 151/363 (41%), Positives = 212/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  211 bits (536), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>sp|P0CH32|UBQ4_ARATH Polyubiquitin 4 OS=Arabidopsis thaliana GN=UBQ4 PE=1 SV=1
          Length = 382

 Score =  245 bits (625), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 151/363 (41%), Positives = 212/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  211 bits (536), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>sp|P42739|UBIQP_ACECL Polyubiquitin (Fragment) OS=Acetabularia cliftonii PE=3 SV=2
          Length = 423

 Score =  244 bits (624), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 150/363 (41%), Positives = 215/363 (59%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAG-RLVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ ++N+K+ I  KEGI  D   L FAG +LE G  L DY I+  STLH + +  
Sbjct: 56  LEVQSSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGLTLADYNIQKESTLHLVLRLR 115

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     TV+N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 116 GGMQIFVKTLTGKTITL-EVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 173

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  + +VK+ +    G+    
Sbjct: 174 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQ 233

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    V 
Sbjct: 234 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTVE 293

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 294 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 353

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +TV++VK K+ DK   P   Q I+FAGK+L +   LA YNIQK STLH
Sbjct: 354 TGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRIIFAGKQLEDGRTLADYNIQKESTLH 413

Query: 354 MVL 356
           +VL
Sbjct: 414 LVL 416



 Score =  240 bits (612), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 159/418 (38%), Positives = 228/418 (54%), Gaps = 15/418 (3%)

Query: 22  ISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAM 80
           I  D   L FAG +LE GR L DY I+  STLH + +    M++FVK  T +T T +E  
Sbjct: 1   IPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT-LEVQ 59

Query: 81  PYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEIL 140
              TV+N+K+ IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +  +
Sbjct: 60  SSDTVENVKSKIQDKEGIPPDQQRLIFAGKQL-EDGLTLADYNIQKESTLHLVLRLRGGM 118

Query: 141 SIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDM 200
            IFVK  TG+ + LEV+ S  + +VK+ +    G+      +I+ GK+LED +TLA Y++
Sbjct: 119 QIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 178

Query: 201 KDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFY 257
           + E  L +       +QIFV+T   + + LEVE    V +VK  + +   +    Q L +
Sbjct: 179 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIF 238

Query: 258 AGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVK 314
           AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +TV++VK K
Sbjct: 239 AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTVENVKSK 298

Query: 315 LFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSI 374
           + DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +I
Sbjct: 299 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 358

Query: 375 SLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           +L +  S+  E  K K Q         + ++     L+D RTLADY +     + LV 
Sbjct: 359 TLEVESSDTVENVKSKIQDKEGIPPDQQRIIFAGKQLEDGRTLADYNIQKESTLHLVL 416


>sp|P0CG84|UBI4P_NICSY Polyubiquitin (Fragment) OS=Nicotiana sylvestris GN=UBI4 PE=2 SV=1
          Length = 377

 Score =  244 bits (624), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 151/363 (41%), Positives = 212/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 11  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 70

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 71  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 128

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 129 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 188

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 189 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 248

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 249 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 308

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 309 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 368

Query: 354 MVL 356
           +VL
Sbjct: 369 LVL 371



 Score =  204 bits (520), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 138/373 (36%), Positives = 199/373 (53%), Gaps = 14/373 (3%)

Query: 66  VKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIK 125
           VK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI+
Sbjct: 1   VKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQ 58

Query: 126 SESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYE 185
            ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ 
Sbjct: 59  KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 118

Query: 186 GKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIV 242
           GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +VK  +
Sbjct: 119 GKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 178

Query: 243 ANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTIT 299
            +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTIT
Sbjct: 179 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 238

Query: 300 LDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPS 359
           L+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL   
Sbjct: 239 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 298

Query: 360 SRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLAD 413
             +          +I+L +  S+  +  K K Q         + L+     L+D RTLAD
Sbjct: 299 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 358

Query: 414 YGMDLSEKVVLVF 426
           Y +     + LV 
Sbjct: 359 YNIQKESTLHLVL 371


>sp|Q58G87|UBQ3_ORYSJ Polyubiquitin 3 OS=Oryza sativa subsp. japonica GN=UBQ3 PE=2 SV=2
          Length = 381

 Score =  243 bits (620), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 151/363 (41%), Positives = 212/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEFSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  209 bits (531), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVEFSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 359 TLADYNIQKESTLHLVL 375


>sp|P0CG82|UBIQP_TETPY Polyubiquitin OS=Tetrahymena pyriformis GN=TU20 PE=3 SV=1
          Length = 381

 Score =  243 bits (620), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 149/364 (40%), Positives = 217/364 (59%), Gaps = 11/364 (3%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTAT 118
             M++FVK  T +T T+ VEA    T++N+K  IQ KEGI  DQ  L++ GK L ED  T
Sbjct: 75  GGMQIFVKTLTGKTITLDVEA--SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 131

Query: 119 MTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAA 178
           ++  NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+   
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPD 191

Query: 179 DHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVV 235
              +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    +
Sbjct: 192 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTI 251

Query: 236 RDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKT 292
            +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT
Sbjct: 252 ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKT 311

Query: 293 WGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTL 352
             GKTITLDV+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STL
Sbjct: 312 LTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 371

Query: 353 HMVL 356
           H+VL
Sbjct: 372 HLVL 375



 Score =  210 bits (535), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 138/378 (36%), Positives = 208/378 (55%), Gaps = 16/378 (4%)

Query: 62  MKLFVKIPTNQTATV-VEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMT 120
           M++FVK  T +T T+ VEA    T++N+K  IQ KEGI  DQ  L++ GK L ED  T++
Sbjct: 1   MQIFVKTLTGKTITLDVEA--SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLS 57

Query: 121 SMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADH 180
             NI+ ES +HLV   +  + IFVK  TG+ + L+V+ S  I +VKA +    G+     
Sbjct: 58  DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQ 117

Query: 181 IMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRD 237
            +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + L+VE    + +
Sbjct: 118 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIEN 177

Query: 238 VKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWG 294
           VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  
Sbjct: 178 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLT 237

Query: 295 GKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHM 354
           GKTITLDV+  +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+
Sbjct: 238 GKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297

Query: 355 VLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDD 408
           VL     +          +I+L +  S+  E  K K Q         + L+     L+D 
Sbjct: 298 VLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 357

Query: 409 RTLADYGMDLSEKVVLVF 426
           RTL+DY +     + LV 
Sbjct: 358 RTLSDYNIQKESTLHLVL 375


>sp|P0CG72|UBI4P_SCHPO Polyubiquitin OS=Schizosaccharomyces pombe (strain 972 / ATCC
           24843) GN=ubi4 PE=1 SV=1
          Length = 382

 Score =  239 bits (610), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 146/363 (40%), Positives = 214/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  205 bits (522), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 135/377 (35%), Positives = 205/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>sp|P0CG75|UBI4P_KLULA Polyubiquitin OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359
           / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=ubi4
           PE=1 SV=1
          Length = 381

 Score =  239 bits (610), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 146/363 (40%), Positives = 214/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  205 bits (521), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 135/377 (35%), Positives = 205/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>sp|P0CG63|UBI4P_YEAST Polyubiquitin OS=Saccharomyces cerevisiae (strain ATCC 204508 /
           S288c) GN=UBI4 PE=1 SV=1
          Length = 381

 Score =  239 bits (609), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 146/363 (40%), Positives = 214/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  205 bits (521), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 135/377 (35%), Positives = 205/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>sp|P0CG76|UBIQA_DICDI Polyubiquitin-A OS=Dictyostelium discoideum GN=ubqA PE=1 SV=1
          Length = 381

 Score =  238 bits (606), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 146/363 (40%), Positives = 214/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E      ++N+KT IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEGSDNIENVKTKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKTKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  + +++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEGSDNIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  202 bits (514), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 134/377 (35%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E      ++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKTKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  + +++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>sp|P0CG79|UBIQG_DICDI Polyubiquitin-G OS=Dictyostelium discoideum GN=ubqG PE=1 SV=1
          Length = 381

 Score =  238 bits (606), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 146/363 (40%), Positives = 214/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E      ++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  + +++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  204 bits (519), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 135/377 (35%), Positives = 204/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E      ++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  + +++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>sp|P0CG81|UBIQH_DICDI Polyubiquitin-H OS=Dictyostelium discoideum GN=ubqH PE=1 SV=1
          Length = 381

 Score =  237 bits (604), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 146/363 (40%), Positives = 214/363 (58%), Gaps = 9/363 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E      ++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTITL-EVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTW 293
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT 
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312

Query: 294 GGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLH 353
            GKTITL+V+  + +++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH
Sbjct: 313 TGKTITLEVECSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372

Query: 354 MVL 356
           +VL
Sbjct: 373 LVL 375



 Score =  205 bits (521), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 135/377 (35%), Positives = 204/377 (54%), Gaps = 14/377 (3%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E      ++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  + +++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDR 409
           L     +          +I+L +  S+  E  K K Q         + L+     L+D R
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVECSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 410 TLADYGMDLSEKVVLVF 426
           TL+DY +     + LV 
Sbjct: 359 TLSDYNIQKESTLHLVL 375


>sp|P0CG55|UBB_SHEEP Polyubiquitin-B OS=Ovis aries GN=UBB PE=2 SV=1
          Length = 305

 Score =  207 bits (527), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 122/301 (40%), Positives = 180/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRMRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  179 bits (454), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 110/283 (38%), Positives = 164/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRMR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  164 bits (414), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 160/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRMRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>sp|P0CG51|UBB_RAT Polyubiquitin-B OS=Rattus norvegicus GN=Ubb PE=1 SV=1
          Length = 305

 Score =  207 bits (527), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 122/301 (40%), Positives = 180/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  179 bits (454), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 110/283 (38%), Positives = 164/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  164 bits (414), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 160/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>sp|P0CG49|UBB_MOUSE Polyubiquitin-B OS=Mus musculus GN=Ubb PE=1 SV=1
          Length = 305

 Score =  207 bits (527), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 122/301 (40%), Positives = 180/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  179 bits (454), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 110/283 (38%), Positives = 164/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  164 bits (414), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 160/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>sp|P0CG62|UBB_CHICK Polyubiquitin-B OS=Gallus gallus GN=UBB PE=2 SV=1
          Length = 305

 Score =  207 bits (527), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 122/301 (40%), Positives = 180/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  179 bits (454), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 110/283 (38%), Positives = 164/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  164 bits (414), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 160/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>sp|P0CG53|UBB_BOVIN Polyubiquitin-B OS=Bos taurus GN=UBB PE=1 SV=1
          Length = 305

 Score =  207 bits (527), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 122/301 (40%), Positives = 180/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  179 bits (453), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 110/283 (38%), Positives = 164/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  164 bits (415), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 160/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>sp|P0CG54|UBB_CAVPO Polyubiquitin-B OS=Cavia porcellus GN=UBB PE=2 SV=1
          Length = 311

 Score =  206 bits (525), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 122/301 (40%), Positives = 180/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  179 bits (453), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 110/283 (38%), Positives = 164/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  163 bits (413), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 160/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>sp|Q8MKD1|UBB_HORSE Polyubiquitin-B OS=Equus caballus GN=UBB PE=2 SV=3
          Length = 305

 Score =  205 bits (521), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 121/301 (40%), Positives = 179/301 (59%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q   +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRFIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+P +T+++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  177 bits (450), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/283 (38%), Positives = 163/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
              I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRFIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  163 bits (412), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 159/299 (53%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q  +FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRFIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>sp|P69309|UBIQP_AVEFA Polyubiquitin OS=Avena fatua PE=2 SV=2
          Length = 305

 Score =  201 bits (511), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 123/301 (40%), Positives = 175/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  176 bits (446), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 111/283 (39%), Positives = 160/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 295



 Score =  162 bits (411), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 107/299 (35%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299


>sp|Q3E7T8|UBQ14_ARATH Polyubiquitin 14 OS=Arabidopsis thaliana GN=UBQ14 PE=1 SV=2
          Length = 305

 Score =  201 bits (511), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 123/301 (40%), Positives = 175/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  176 bits (445), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 111/283 (39%), Positives = 160/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 295



 Score =  162 bits (410), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 107/299 (35%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299


>sp|P69325|UBIQP_SOYBN Polyubiquitin OS=Glycine max GN=SUBI-1 PE=2 SV=2
          Length = 305

 Score =  201 bits (511), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 123/301 (40%), Positives = 175/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  176 bits (445), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 111/283 (39%), Positives = 160/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 295



 Score =  162 bits (410), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 107/299 (35%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299


>sp|Q1EC66|UBQ3_ARATH Polyubiquitin 3 OS=Arabidopsis thaliana GN=UBQ3 PE=1 SV=1
          Length = 306

 Score =  201 bits (510), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 123/301 (40%), Positives = 175/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  176 bits (445), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 111/283 (39%), Positives = 160/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 295



 Score =  162 bits (410), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 107/299 (35%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299


>sp|P0CH27|RL402_TRYCR Ubiquitin-60S ribosomal protein L40 OS=Trypanosoma cruzi PE=2 SV=1
          Length = 356

 Score =  199 bits (507), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 123/312 (39%), Positives = 179/312 (57%), Gaps = 8/312 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T   +E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 1   MQIFVKTLTGKT-IALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVESSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTI L+V+  +T+++VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 239 KTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298

Query: 356 LAPSSRIIELPL 367
           L     ++E  L
Sbjct: 299 LRLRGGVMEPTL 310



 Score =  174 bits (441), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/283 (38%), Positives = 161/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T   +E     T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKT-IALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVESSDTIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TLA Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 295



 Score =  162 bits (411), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 107/299 (35%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y+
Sbjct: 1   MQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTI L+V+  +T+++VK 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVESSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 241 IALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299


>sp|P0CG74|UBI4P_CANAX Polyubiquitin OS=Candida albicans GN=UBI4 PE=1 SV=1
          Length = 305

 Score =  197 bits (501), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/301 (39%), Positives = 177/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  172 bits (435), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 107/283 (37%), Positives = 162/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K+ I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K+ IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK+ +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  155 bits (392), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK+ +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>sp|P0CG70|UBI4P_NEUCR Polyubiquitin OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A
           / CBS 708.71 / DSM 1257 / FGSC 987) GN=ubi-4 PE=1 SV=1
          Length = 305

 Score =  196 bits (498), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 119/301 (39%), Positives = 176/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K+ + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  171 bits (432), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/283 (37%), Positives = 160/283 (56%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+K  I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VK  +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK+ + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  155 bits (393), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VK  +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK+ + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQ 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  +  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>sp|P0CG88|UBIQJ_DICDI Polyubiquitin-J OS=Dictyostelium discoideum GN=ubqJ PE=1 SV=1
          Length = 305

 Score =  195 bits (495), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 118/301 (39%), Positives = 176/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E      ++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  + +++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  171 bits (432), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/283 (38%), Positives = 162/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E      ++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  156 bits (394), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 103/299 (34%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  + +++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>sp|P0CG80|UBIQI_DICDI Polyubiquitin-I OS=Dictyostelium discoideum GN=ubqI PE=1 SV=1
          Length = 305

 Score =  195 bits (495), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 118/301 (39%), Positives = 176/301 (58%), Gaps = 8/301 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E      ++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L +   L    QIFVKT  G
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  + +++VK K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+V
Sbjct: 239 KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298

Query: 356 L 356
           L
Sbjct: 299 L 299



 Score =  171 bits (432), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/283 (38%), Positives = 162/283 (57%), Gaps = 6/283 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E      ++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIE 252

Query: 237 DVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           +VK  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295



 Score =  156 bits (394), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 103/299 (34%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+  + +++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPS 373
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL     +          +
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240

Query: 374 ISLSISISEVKEMAKVKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           I+L +  S+  E  K K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 241 ITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299


>sp|Q39256|UBQ8_ARATH Polyubiquitin 8 OS=Arabidopsis thaliana GN=UBQ8 PE=3 SV=1
          Length = 631

 Score =  191 bits (486), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 156/453 (34%), Positives = 230/453 (50%), Gaps = 33/453 (7%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAG-RLVDYGIRNNSTLHFLHQNL 59
           + V+ S+ I N+KA I  KEGI  D   L FAG +LE G  L DY I+  STLH + +  
Sbjct: 17  LDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYNIQKESTLHLVLRLR 76

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FV+  T +T T +E     T+ N+K  IQ KEGI   Q  L++ GK L ED  T+
Sbjct: 77  GGMQIFVQTLTGKTIT-LEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQL-EDGRTL 134

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATG-----EIVNLEVKHSFAIRDVKAIVGSVVG 174
              NI+ ES +HLV      + IFV   +G     + + L+V+ S  I +VKA +    G
Sbjct: 135 ADYNIQKESTLHLVLRLCGGMQIFVSTFSGKNFTSDTLTLKVESSDTIENVKAKIQDREG 194

Query: 175 VSAADHIMIYEGKKL--EDSKTLAFYDMKDE---CLLEMFPSSIQIFVRT-PIEEIVR-- 226
           +      +I+ G++L  ED++TLA Y +++    CL       + IFV+  P        
Sbjct: 195 LRPDHQRLIFHGEELFTEDNRTLADYGIRNRSTLCLALRLRGDMYIFVKNLPYNSFTGEN 254

Query: 227 --LEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNN---YVLDV 281
             LEVE    + +VK  + +   + +    L +AG  LE  +TLA Y I+     Y++  
Sbjct: 255 FILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEGGRTLAHYNIQKGSTLYLVTR 314

Query: 282 LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDK--LQTPLHLQSIVFAGKRLFENH 339
                QIFVKT   K I L+V+ ++T+++VK  + DK  +Q   +LQ ++F GK L +  
Sbjct: 315 FRCGMQIFVKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDGC 374

Query: 340 VLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQAAVKE-- 397
            LA Y+IQK STLH+VL     +     +F    I+L +  S+  +  K K Q  V    
Sbjct: 375 TLADYSIQKESTLHLVLGMQIFV----KLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPP 430

Query: 398 ----LLVDQVALQDDRTLADYGMDLSEKVVLVF 426
               LL     LQD RTL DY +     + L F
Sbjct: 431 DQQILLFRGGQLQDGRTLGDYNIRNESTLHLFF 463



 Score =  184 bits (466), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 131/377 (34%), Positives = 203/377 (53%), Gaps = 22/377 (5%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA +  KE I  D+  L FAG  LE GR L  Y I+  STL+ + +  
Sbjct: 257 LEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEGGRTLAHYNIQKGSTLYLVTRFR 316

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQS--DQFTLVYDGKLLKEDTA 117
             M++FVK  T +   + E   + T++N+K M+Q KEGIQ   +   L++ GK LK D  
Sbjct: 317 CGMQIFVKTLTRKRINL-EVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELK-DGC 374

Query: 118 TMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSA 177
           T+   +I+ ES +HLV      + IFVK   G+I+ LEV  S  I+ VKA +   VG   
Sbjct: 375 TLADYSIQKESTLHLVLG----MQIFVKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPP 430

Query: 178 ADHIMIYEGKKLEDSKTLAFYDMKDECLLEMF---PSSIQIFVRT-------PIEEIVRL 227
              I+++ G +L+D +TL  Y++++E  L +F      +QIFV+T       P  + + L
Sbjct: 431 DQQILLFRGGQLQDGRTLGDYNIRNESTLHLFFHIRHGMQIFVKTFSFSGETPTCKTITL 490

Query: 228 EVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVL---PS 284
           EVE    + +VK  + + + + L  Q L + G  L   +TL  Y I+    +  L     
Sbjct: 491 EVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGSRTLLDYNIQKGSTIHQLFLQRG 550

Query: 285 PFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARY 344
             QIF+KT  GKTI L+V+  +T+ +VK K+  K       Q ++F G++L +   L  Y
Sbjct: 551 GMQIFIKTLTGKTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDGVTLGDY 610

Query: 345 NIQKHSTLHMVLAPSSR 361
           +I K STL++VL    R
Sbjct: 611 DIHKKSTLYLVLRLRQR 627



 Score =  182 bits (463), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 149/459 (32%), Positives = 229/459 (49%), Gaps = 38/459 (8%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++VK S+ I N+KA I  KEGI      L FAG +LE GR L DY I+  STLH + +  
Sbjct: 93  LEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLC 152

Query: 60  SEMKLFVKIPTNQTAT----VVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGK-LLKE 114
             M++FV   + +  T     ++     T++N+K  IQ +EG++ D   L++ G+ L  E
Sbjct: 153 GGMQIFVSTFSGKNFTSDTLTLKVESSDTIENVKAKIQDREGLRPDHQRLIFHGEELFTE 212

Query: 115 DTATMTSMNIKSESIIHLVFCPKEILSIFVK-----AATGEIVNLEVKHSFAIRDVKAIV 169
           D  T+    I++ S + L    +  + IFVK     + TGE   LEV+ S  I +VKA +
Sbjct: 213 DNRTLADYGIRNRSTLCLALRLRGDMYIFVKNLPYNSFTGENFILEVESSDTIDNVKAKL 272

Query: 170 GSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDEC---LLEMFPSSIQIFVRTPIEEIVR 226
                +    H +I+ GK LE  +TLA Y+++      L+  F   +QIFV+T   + + 
Sbjct: 273 QDKERIPMDLHRLIFAGKPLEGGRTLAHYNIQKGSTLYLVTRFRCGMQIFVKTLTRKRIN 332

Query: 227 LEVEVLIVVRDVKEIVANI--IDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDVLPS 284
           LEVE    + +VK +V +   I      Q L + G +L+   TLA Y I+    L ++  
Sbjct: 333 LEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDGCTLADYSIQKESTLHLVLG 392

Query: 285 PFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARY 344
             QIFVK +GGK ITL+V   +T++ VK K+ DK+ +P   Q ++F G +L +   L  Y
Sbjct: 393 -MQIFVKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDY 451

Query: 345 NIQKHSTLHMVLAPSSRIIELPLIFID-----------PSISLSISISEVKEMAKVKFQA 393
           NI+  STLH+       I     IF+             +I+L +  S+  +  KVK Q 
Sbjct: 452 NIRNESTLHLFF----HIRHGMQIFVKTFSFSGETPTCKTITLEVESSDTIDNVKVKIQH 507

Query: 394 AV------KELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
            V      + L+     L   RTL DY +     +  +F
Sbjct: 508 KVGIPLDRQRLIFGGRVLVGSRTLLDYNIQKGSTIHQLF 546



 Score =  163 bits (413), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 129/391 (32%), Positives = 201/391 (51%), Gaps = 28/391 (7%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           ++++ K  T +T T+ +     ++ N+K  IQ KEGI  DQ  L++ GK L ED  T+  
Sbjct: 3   IQIYAKTLTEKTITL-DVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQL-EDGLTLAD 60

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFV+  TG+ + LEVK S  I +VKA +    G+      
Sbjct: 61  YNIQKESTLHLVLRLRGGMQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQR 120

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRT-----PIEEIVRLEVEVLI 233
           +I+ GK+LED +TLA Y+++ E  L +       +QIFV T        + + L+VE   
Sbjct: 121 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLCGGMQIFVSTFSGKNFTSDTLTLKVESSD 180

Query: 234 VVRDVKEIVANIIDLSLGNQDLFYAGTKL--EACKTLASYGIKNNYVLDV---LPSPFQI 288
            + +VK  + +   L   +Q L + G +L  E  +TLA YGI+N   L +   L     I
Sbjct: 181 TIENVKAKIQDREGLRPDHQRLIFHGEELFTEDNRTLADYGIRNRSTLCLALRLRGDMYI 240

Query: 289 FVK-----TWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLAR 343
           FVK     ++ G+   L+V+  +T+ +VK KL DK + P+ L  ++FAGK L     LA 
Sbjct: 241 FVKNLPYNSFTGENFILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEGGRTLAH 300

Query: 344 YNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSI----SISEVKEMAK----VKFQAAV 395
           YNIQK STL++V      +           I+L +    +I  VK M +    ++ Q  +
Sbjct: 301 YNIQKGSTLYLVTRFRCGMQIFVKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQPNL 360

Query: 396 KELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           + L+     L+D  TLADY +     + LV 
Sbjct: 361 QRLIFLGKELKDGCTLADYSIQKESTLHLVL 391



 Score =  112 bits (279), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 82/226 (36%), Positives = 119/226 (52%), Gaps = 26/226 (11%)

Query: 212 SIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASY 271
           +IQI+ +T  E+ + L+VE    + +VK  + N   + L  Q L +AG +LE   TLA Y
Sbjct: 2   TIQIYAKTLTEKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADY 61

Query: 272 GIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSI 328
            I+    L +   L    QIFV+T  GKTITL+V+  +T+ +VK K+ DK       Q +
Sbjct: 62  NIQKESTLHLVLRLRGGMQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRL 121

Query: 329 VFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDP---------SISLSIS 379
           +FAGK+L +   LA YNIQK STLH+VL    R+     IF+           +++L + 
Sbjct: 122 IFAGKQLEDGRTLADYNIQKESTLHLVL----RLCGGMQIFVSTFSGKNFTSDTLTLKVE 177

Query: 380 ISEVKEMAKVKFQAAVKELLVDQVAL---------QDDRTLADYGM 416
            S+  E  K K Q   + L  D   L         +D+RTLADYG+
Sbjct: 178 SSDTIENVKAKIQDR-EGLRPDHQRLIFHGEELFTEDNRTLADYGI 222


>sp|P69315|UBIQP_LINUS Polyubiquitin (Fragment) OS=Linum usitatissimum PE=3 SV=2
          Length = 305

 Score =  187 bits (474), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/304 (39%), Positives = 172/304 (56%), Gaps = 9/304 (2%)

Query: 22  ISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAM 80
           I  D   L FAG +LE GR L DY I+  STLH + +    M++F+K  T +T T+ E  
Sbjct: 1   IPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFLKTLTGKTITL-EVE 59

Query: 81  PYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEIL 140
              T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+   NI+ ES +HLV   +  +
Sbjct: 60  SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGM 118

Query: 141 SIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDM 200
            IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TLA Y++
Sbjct: 119 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 178

Query: 201 KDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFY 257
           + E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L +
Sbjct: 179 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 238

Query: 258 AGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVK 314
           AG +LE  +TLA Y I+    L +   L    QIFVKT  GKTITL+V+  +T+ +VK K
Sbjct: 239 AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK 298

Query: 315 LFDK 318
           + DK
Sbjct: 299 IQDK 302



 Score =  177 bits (450), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/301 (37%), Positives = 165/301 (54%), Gaps = 7/301 (2%)

Query: 98  IQSDQFTLVYDGKLLKEDTATMTSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVK 157
           I  DQ  L++ GK L ED  T+   NI+ ES +HLV   +  + IF+K  TG+ + LEV+
Sbjct: 1   IPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFLKTLTGKTITLEVE 59

Query: 158 HSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQ 214
            S  I +VKA +    G+      +I+ GK+LED +TLA Y+++ E  L +       +Q
Sbjct: 60  SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQ 119

Query: 215 IFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIK 274
           IFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TLA Y I+
Sbjct: 120 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 179

Query: 275 NNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFA 331
               L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q ++FA
Sbjct: 180 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 239

Query: 332 GKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKF 391
           GK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +  K K 
Sbjct: 240 GKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 299

Query: 392 Q 392
           Q
Sbjct: 300 Q 300



 Score =  157 bits (398), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/243 (40%), Positives = 141/243 (58%), Gaps = 6/243 (2%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 56  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 115

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 116 GGMQIFVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 173

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 174 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 233

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVR 236
             +I+ GK+LED +TLA Y+++ E  L +       +QIFV+T   + + LEVE    + 
Sbjct: 234 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 293

Query: 237 DVK 239
           +VK
Sbjct: 294 NVK 296



 Score =  138 bits (347), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/257 (35%), Positives = 136/257 (52%), Gaps = 12/257 (4%)

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TLA Y+++ E  L +       +QIF++T   + + LEVE    + +V
Sbjct: 8   LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFLKTLTGKTITLEVESSDTIDNV 67

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFVKT  G
Sbjct: 68  KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 127

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMV 355
           KTITL+V+  +T+ +VK K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+V
Sbjct: 128 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 187

Query: 356 LAPSSRIIELPLIFIDPSISLSISISEVKEMAKVKFQ------AAVKELLVDQVALQDDR 409
           L     +          +I+L +  S+  +  K K Q         + L+     L+D R
Sbjct: 188 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 247

Query: 410 TLADYGMDLSEKVVLVF 426
           TLADY +     + LV 
Sbjct: 248 TLADYNIQKESTLHLVL 264



 Score =  122 bits (305), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 76/176 (43%), Positives = 104/176 (59%), Gaps = 3/176 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 132 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 191

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T+ E     T+ N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 192 GGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 249

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGV 175
              NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+
Sbjct: 250 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGI 305


>sp|Q9FHQ6|UBQ9_ARATH Polyubiquitin 9 OS=Arabidopsis thaliana GN=UBQ9 PE=3 SV=1
          Length = 322

 Score =  179 bits (453), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 115/302 (38%), Positives = 173/302 (57%), Gaps = 9/302 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++  K  T +T T+ + +   T+ N+K  IQ  EGI  DQ  L++ GKLL +D  T+  
Sbjct: 3   MQIHAKTLTEKTITI-DVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLL-DDGRTLAD 60

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            +I+ +SI+HL    +  + IFVK  TG+ + LEV+ S  I +VKA +    GV      
Sbjct: 61  YSIQKDSILHLALRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQR 120

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+L+D +TLA Y+++ E  L +       +QIFVRT   + + LEVE      +V
Sbjct: 121 LIFAGKQLDDGRTLADYNIQKESTLHLVLRLRGGMQIFVRTLTRKTIALEVESSDTTDNV 180

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGG 295
           K  + +   +    Q L +AG +LE  +TLA Y I+    L +   L    QIFV T  G
Sbjct: 181 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLCGGMQIFVNTLTG 240

Query: 296 KTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIVFAGKRLFEN-HVLARYNIQKHSTLHM 354
           KTITL+V+  +T+ +VK K+ DK +     Q ++FAG++L +  + LA YNIQK STLH+
Sbjct: 241 KTITLEVESSDTIDNVKAKIQDKERIQPDQQRLIFAGEQLEDGYYTLADYNIQKESTLHL 300

Query: 355 VL 356
           VL
Sbjct: 301 VL 302



 Score =  144 bits (364), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/279 (36%), Positives = 149/279 (53%), Gaps = 7/279 (2%)

Query: 6   SEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKL 64
           S+ I N+KA I   EGI  D   L F+G  L+ GR L DY I+ +S LH   +    M++
Sbjct: 22  SDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYSIQKDSILHLALRLRGGMQI 81

Query: 65  FVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTSMNI 124
           FVK  T +T T +E     T+ N+K  IQ KEG+  DQ  L++ GK L +D  T+   NI
Sbjct: 82  FVKTLTGKTIT-LEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQL-DDGRTLADYNI 139

Query: 125 KSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIY 184
           + ES +HLV   +  + IFV+  T + + LEV+ S    +VKA +    G+      +I+
Sbjct: 140 QKESTLHLVLRLRGGMQIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIF 199

Query: 185 EGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEI 241
            GK+LED +TLA Y+++ E  L +       +QIFV T   + + LEVE    + +VK  
Sbjct: 200 AGKQLEDGRTLADYNIQKESTLHLVLRLCGGMQIFVNTLTGKTITLEVESSDTIDNVKAK 259

Query: 242 VANIIDLSLGNQDLFYAGTKLE-ACKTLASYGIKNNYVL 279
           + +   +    Q L +AG +LE    TLA Y I+    L
Sbjct: 260 IQDKERIQPDQQRLIFAGEQLEDGYYTLADYNIQKESTL 298



 Score =  130 bits (327), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/304 (32%), Positives = 155/304 (50%), Gaps = 21/304 (6%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + I  K  T + + ++V  S  I +VKA +  + G+      +I+ GK L+D +TLA Y 
Sbjct: 3   MQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYS 62

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ + +L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 63  IQKDSILHLALRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLI 122

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +L+  +TLA Y I+    L +   L    QIFV+T   KTI L+V+  +T  +VK 
Sbjct: 123 FAGKQLDDGRTLADYNIQKESTLHLVLRLRGGMQIFVRTLTRKTIALEVESSDTTDNVKA 182

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFID-- 371
           K+ DK   P   Q ++FAGK+L +   LA YNIQK STLH+VL    R+     IF++  
Sbjct: 183 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL----RLCGGMQIFVNTL 238

Query: 372 --PSISLSISISEVKEMAKVKFQAAVK------ELLVDQVALQDD-RTLADYGMDLSEKV 422
              +I+L +  S+  +  K K Q   +       L+     L+D   TLADY +     +
Sbjct: 239 TGKTITLEVESSDTIDNVKAKIQDKERIQPDQQRLIFAGEQLEDGYYTLADYNIQKESTL 298

Query: 423 VLVF 426
            LV 
Sbjct: 299 HLVL 302



 Score =  123 bits (308), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/210 (38%), Positives = 118/210 (56%), Gaps = 4/210 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I N+KA I  KEG+  D   L FAG +L+ GR L DY I+  STLH + +  
Sbjct: 93  LEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYNIQKESTLHLVLRLR 152

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FV+  T +T   +E     T  N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 153 GGMQIFVRTLTRKT-IALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 210

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
              NI+ ES +HLV      + IFV   TG+ + LEV+ S  I +VKA +     +    
Sbjct: 211 ADYNIQKESTLHLVLRLCGGMQIFVNTLTGKTITLEVESSDTIDNVKAKIQDKERIQPDQ 270

Query: 180 HIMIYEGKKLEDS-KTLAFYDMKDECLLEM 208
             +I+ G++LED   TLA Y+++ E  L +
Sbjct: 271 QRLIFAGEQLEDGYYTLADYNIQKESTLHL 300



 Score =  115 bits (289), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 77/224 (34%), Positives = 118/224 (52%), Gaps = 9/224 (4%)

Query: 212 SIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASY 271
           S+QI  +T  E+ + ++V     + +VK  + +I  + L  Q L ++G  L+  +TLA Y
Sbjct: 2   SMQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADY 61

Query: 272 GIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSI 328
            I+ + +L +   L    QIFVKT  GKTITL+V+  +T+ +VK K+ DK   P   Q +
Sbjct: 62  SIQKDSILHLALRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRL 121

Query: 329 VFAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAK 388
           +FAGK+L +   LA YNIQK STLH+VL     +          +I+L +  S+  +  K
Sbjct: 122 IFAGKQLDDGRTLADYNIQKESTLHLVLRLRGGMQIFVRTLTRKTIALEVESSDTTDNVK 181

Query: 389 VKFQAA------VKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
            K Q         + L+     L+D RTLADY +     + LV 
Sbjct: 182 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 225


>sp|P0CG60|UBB_PONPY Polyubiquitin-B OS=Pongo pygmaeus GN=UBB PE=3 SV=1
          Length = 229

 Score =  154 bits (389), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 88/223 (39%), Positives = 132/223 (59%), Gaps = 6/223 (2%)

Query: 140 LSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHIMIYEGKKLEDSKTLAFYD 199
           + IFVK  TG+ + LEV+ S  I +VKA +    G+      +I+ GK+LED +TL+ Y+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 200 MKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLF 256
           ++ E  L +       +QIFV+T   + + LEVE    + +VK  + +   +    Q L 
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 YAGTKLEACKTLASYGIKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKV 313
           +AG +LE  +TL+ Y I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 314 KLFDKLQTPLHLQSIVFAGKRLFENHVLARYNIQKHSTLHMVL 356
           K+ DK   P   Q ++FAGK+L +   L+ YNIQK STLH+VL
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score =  149 bits (377), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 128/209 (61%), Gaps = 3/209 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNL 59
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH + +  
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74

Query: 60  SEMKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATM 119
             M++FVK  T +T T +E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T+
Sbjct: 75  GGMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTL 132

Query: 120 TSMNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAAD 179
           +  NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+    
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 180 HIMIYEGKKLEDSKTLAFYDMKDECLLEM 208
             +I+ GK+LED +TL+ Y+++ E  L +
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  135 bits (340), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 126/221 (57%), Gaps = 5/221 (2%)

Query: 62  MKLFVKIPTNQTATVVEAMPYHTVQNIKTMIQVKEGIQSDQFTLVYDGKLLKEDTATMTS 121
           M++FVK  T +T T+ E  P  T++N+K  IQ KEGI  DQ  L++ GK L ED  T++ 
Sbjct: 1   MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 58

Query: 122 MNIKSESIIHLVFCPKEILSIFVKAATGEIVNLEVKHSFAIRDVKAIVGSVVGVSAADHI 181
            NI+ ES +HLV   +  + IFVK  TG+ + LEV+ S  I +VKA +    G+      
Sbjct: 59  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118

Query: 182 MIYEGKKLEDSKTLAFYDMKDECLLEM---FPSSIQIFVRTPIEEIVRLEVEVLIVVRDV 238
           +I+ GK+LED +TL+ Y+++ E  L +       +QIFV+T   + + LEVE    + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KEIVANIIDLSLGNQDLFYAGTKLEACKTLASYGIKNNYVL 279
           K  + +   +    Q L +AG +LE  +TL+ Y I+    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 219



 Score =  120 bits (301), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 118/223 (52%), Gaps = 9/223 (4%)

Query: 213 IQIFVRTPIEEIVRLEVEVLIVVRDVKEIVANIIDLSLGNQDLFYAGTKLEACKTLASYG 272
           +QIFV+T   + + LEVE    + +VK  + +   +    Q L +AG +LE  +TL+ Y 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 273 IKNNYVLDV---LPSPFQIFVKTWGGKTITLDVQPYNTVQDVKVKLFDKLQTPLHLQSIV 329
           I+    L +   L    QIFVKT  GKTITL+V+P +T+++VK K+ DK   P   Q ++
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 330 FAGKRLFENHVLARYNIQKHSTLHMVLAPSSRIIELPLIFIDPSISLSISISEVKEMAKV 389
           FAGK+L +   L+ YNIQK STLH+VL     +          +I+L +  S+  E  K 
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 390 KFQ------AAVKELLVDQVALQDDRTLADYGMDLSEKVVLVF 426
           K Q         + L+     L+D RTL+DY +     + LV 
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223



 Score = 52.0 bits (123), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 1   MKVKKSEPIKNLKAMIHVKEGISEDICDLFFAGDRLEAGR-LVDYGIRNNSTLHFL 55
           ++V+ S+ I+N+KA I  KEGI  D   L FAG +LE GR L DY I+  STLH +
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.321    0.137    0.378 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 142,252,638
Number of Sequences: 539616
Number of extensions: 5656744
Number of successful extensions: 18236
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 15023
Number of HSP's gapped (non-prelim): 1133
length of query: 426
length of database: 191,569,459
effective HSP length: 120
effective length of query: 306
effective length of database: 126,815,539
effective search space: 38805554934
effective search space used: 38805554934
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)