BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036697
(253 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225427923|ref|XP_002275216.1| PREDICTED: translocon-associated protein subunit alpha [Vitis
vinifera]
gi|147821778|emb|CAN77171.1| hypothetical protein VITISV_029842 [Vitis vinifera]
gi|297744658|emb|CBI37920.3| unnamed protein product [Vitis vinifera]
Length = 253
Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust.
Identities = 192/242 (79%), Positives = 212/242 (87%), Gaps = 3/242 (1%)
Query: 7 RVFFFALLLLASPLLQVAKCQSDSETGVAETEGGDLGIVGEDAQDFGDGTLSPAPGVDTV 66
RVFF A LLL SP LQVA+CQS+ E A EGGDLGIVGEDAQDFGDG+ SPAPGVDTV
Sbjct: 4 RVFFLAFLLLCSPFLQVARCQSEVEVSEAAEEGGDLGIVGEDAQDFGDGSFSPAPGVDTV 63
Query: 67 CIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNN 126
C+FPKNSAR+V AGEE ELLVGMKNDGESS+NVIA++ASVHLPF+H LLVQNL+ Q FNN
Sbjct: 64 CVFPKNSARLVTAGEEAELLVGMKNDGESSLNVIAVKASVHLPFNHQLLVQNLSTQGFNN 123
Query: 127 ATVPVSAQATFPIHFCCQ---QPGTFDLVGSIVYEVDQHPYQSTFYNGTIEVVESGGFIS 183
A+VP SAQATFP F QPGTFDLVG+IVYE+DQHPYQS FYNGTIEVVE+GGF+S
Sbjct: 124 ASVPASAQATFPYIFAVSKYLQPGTFDLVGTIVYEIDQHPYQSVFYNGTIEVVEAGGFVS 183
Query: 184 IESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEWLQGTAYTQ 243
IESVFLV LGIALLV FG+WI GQ++ LSKKTK+APKVEVGTGTTDAS+DEWLQGTAYTQ
Sbjct: 184 IESVFLVFLGIALLVFFGVWIRGQIQNLSKKTKRAPKVEVGTGTTDASLDEWLQGTAYTQ 243
Query: 244 SL 245
SL
Sbjct: 244 SL 245
>gi|257815608|gb|ACV70142.1| putative translocon-associated protein alpha subunit [Jatropha
curcas]
Length = 257
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/247 (81%), Positives = 216/247 (87%), Gaps = 6/247 (2%)
Query: 3 MKNFRVFFFALLLLASPLLQVAKCQSDSETGV--AETEGGDLGIVGEDAQDFGDGTLSPA 60
MKN VFFFALLLLASPLLQVA+CQSDS+ V A E DLGIVGEDAQDFGDGT SPA
Sbjct: 1 MKNLSVFFFALLLLASPLLQVARCQSDSDVEVTDAAEEVSDLGIVGEDAQDFGDGTFSPA 60
Query: 61 PGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLT 120
PGV+TVC+FPKNSARVV AGEE ELLVG+KNDGESS+N+ A++ASVHLPFDH LLVQNLT
Sbjct: 61 PGVETVCVFPKNSARVVPAGEEAELLVGIKNDGESSINITAVKASVHLPFDHRLLVQNLT 120
Query: 121 GQAFNNATVPVSAQATFPIHFCC----QQPGTFDLVGSIVYEVDQHPYQSTFYNGTIEVV 176
QAFNNATVP S QATFPI F QPG FDLVGSI+YE+DQ YQSTFYNGTIEVV
Sbjct: 121 AQAFNNATVPPSTQATFPIRFFAVSKYLQPGNFDLVGSIIYEIDQQGYQSTFYNGTIEVV 180
Query: 177 ESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEWL 236
ESGGF+SIESVFLVTLGIALLVLFGLWIHGQV+ LSKKTK+APKVEVGTGT DASMDEWL
Sbjct: 181 ESGGFLSIESVFLVTLGIALLVLFGLWIHGQVQNLSKKTKRAPKVEVGTGTRDASMDEWL 240
Query: 237 QGTAYTQ 243
QGTAYTQ
Sbjct: 241 QGTAYTQ 247
>gi|255576715|ref|XP_002529245.1| translocon-associated protein, alpha subunit, putative [Ricinus
communis]
gi|223531281|gb|EEF33123.1| translocon-associated protein, alpha subunit, putative [Ricinus
communis]
Length = 260
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/247 (80%), Positives = 220/247 (89%), Gaps = 6/247 (2%)
Query: 3 MKNFRVFFFALLLLASPLLQVAKCQSDSETGVAET--EGGDLGIVGEDAQD-FGDGTLSP 59
MKN RVFFFALLLLASPLLQVAKCQSDSE +A + E DLGIVGEDA D FGDG+ SP
Sbjct: 4 MKNLRVFFFALLLLASPLLQVAKCQSDSEAEIAGSGEEVSDLGIVGEDAHDDFGDGSFSP 63
Query: 60 APGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNL 119
APGV+TVC+FPKNSARVV AGEETE+LVG+KNDG+SS+NVIA++ASVHLPFDH LLVQNL
Sbjct: 64 APGVNTVCVFPKNSARVVPAGEETEVLVGVKNDGDSSINVIAVKASVHLPFDHRLLVQNL 123
Query: 120 TGQAFNNATVPVSAQATFPIHFCCQ---QPGTFDLVGSIVYEVDQHPYQSTFYNGTIEVV 176
T QAFNNATVP SAQATFP F QPG+FDLVG+I+YE+DQHPYQSTFYNGTIEVV
Sbjct: 124 TAQAFNNATVPASAQATFPYIFAVSKYLQPGSFDLVGTIIYEIDQHPYQSTFYNGTIEVV 183
Query: 177 ESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEWL 236
ESGGF+SIESVFLVTLGIALLVL GLWIHGQ++ LSKKTK+APKVEVGTGT D S+DEWL
Sbjct: 184 ESGGFLSIESVFLVTLGIALLVLLGLWIHGQIQNLSKKTKRAPKVEVGTGTRDVSLDEWL 243
Query: 237 QGTAYTQ 243
QGTAYTQ
Sbjct: 244 QGTAYTQ 250
>gi|224078092|ref|XP_002305486.1| predicted protein [Populus trichocarpa]
gi|118486855|gb|ABK95262.1| unknown [Populus trichocarpa]
gi|222848450|gb|EEE85997.1| predicted protein [Populus trichocarpa]
Length = 256
Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/243 (78%), Positives = 213/243 (87%), Gaps = 5/243 (2%)
Query: 3 MKNFRVFFFALLLLASPLLQVAKCQSDSETGVAET--EGGDLGIVGEDAQDFGDGTLSPA 60
MK+ RVFFFALLLLASPLLQVA CQSDS+ VAET E DLGIVGEDAQDFGD SPA
Sbjct: 1 MKHLRVFFFALLLLASPLLQVATCQSDSDAEVAETAEEVSDLGIVGEDAQDFGDANFSPA 60
Query: 61 PGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLT 120
PGV+TVC+FPKNSAR+V AGEETELLVGMKNDGE + +IAI+ASVHLPFDH LLVQNL+
Sbjct: 61 PGVETVCVFPKNSARLVTAGEETELLVGMKNDGELPITIIAIRASVHLPFDHKLLVQNLS 120
Query: 121 GQAFNNATVPVSAQATFPIHFCCQ---QPGTFDLVGSIVYEVDQHPYQSTFYNGTIEVVE 177
Q FNNATVP SAQATFP F QPG+FDLVG+IVYE+DQHPYQSTF+NGTIEVV+
Sbjct: 121 AQGFNNATVPASAQATFPYIFGVSKYLQPGSFDLVGTIVYEIDQHPYQSTFHNGTIEVVD 180
Query: 178 SGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEWLQ 237
SG F+S+ESVFL+TLGIALLVLFGLW++GQ++ LSKKTK+APKVEVGTGT DASMDEWL+
Sbjct: 181 SGVFLSMESVFLITLGIALLVLFGLWVNGQIQNLSKKTKRAPKVEVGTGTRDASMDEWLE 240
Query: 238 GTA 240
GTA
Sbjct: 241 GTA 243
>gi|449458570|ref|XP_004147020.1| PREDICTED: translocon-associated protein subunit alpha-like
[Cucumis sativus]
gi|449489703|ref|XP_004158391.1| PREDICTED: translocon-associated protein subunit alpha-like
[Cucumis sativus]
Length = 260
Score = 339 bits (870), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 168/246 (68%), Positives = 204/246 (82%), Gaps = 6/246 (2%)
Query: 1 MEMKNFRVFFFALLLLASPLLQVAKCQSDSETGVAET---EGGDLGIVGEDAQDFGDGTL 57
M K FR+FF ALLLLASP LQV +CQSD+E+ E + DLGIVGE+ D+GDG+
Sbjct: 1 MASKAFRIFFLALLLLASPFLQVVRCQSDAESESEEAAVDDATDLGIVGEEELDYGDGSF 60
Query: 58 SPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQ 117
S APG+DTVC+FPKNSAR+V AGEETE+L G+KN+G+SS+NVIAI+ASVH FDH LL+Q
Sbjct: 61 SAAPGIDTVCVFPKNSARLVVAGEETEILAGVKNNGDSSLNVIAIKASVHYTFDHRLLIQ 120
Query: 118 NLTGQAFNNATVPVSAQATFPIHFCCQ---QPGTFDLVGSIVYEVDQHPYQSTFYNGTIE 174
NL+ FNNA+VP S+QATFP F Q G FDLVG+I+YE+DQHPYQSTF+NGTI+
Sbjct: 121 NLSAVGFNNASVPASSQATFPYLFAVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTID 180
Query: 175 VVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDE 234
V E+GGF+SIESVFLVTLGIAL+VL GLWIHGQ++ LSKKTK+APKVEVGT ++DAS+DE
Sbjct: 181 VAEAGGFLSIESVFLVTLGIALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKSSDASLDE 240
Query: 235 WLQGTA 240
WL+GTA
Sbjct: 241 WLEGTA 246
>gi|125556754|gb|EAZ02360.1| hypothetical protein OsI_24464 [Oryza sativa Indica Group]
Length = 257
Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 159/239 (66%), Positives = 197/239 (82%), Gaps = 6/239 (2%)
Query: 19 PLLQVAKCQSDSETGVAET-EGGDLGIVGEDAQDFGDGTLSPAPGVDTVCIFPKNSARVV 77
P++QVA+ QS+ E AE +G DLGIV +D Q DG LSPAPGV+TVC+FPKN+ ++V
Sbjct: 21 PVVQVARAQSEEEAATAEVVDGADLGIVSDDTQVSSDGPLSPAPGVETVCVFPKNAGKIV 80
Query: 78 AAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATF 137
AGEETELLVG++N+GES++NV+AI +++HLPFDH + QNLT Q F NA+VPVS QATF
Sbjct: 81 LAGEETELLVGLQNEGESTLNVVAIHSTLHLPFDHKMYGQNLTVQNFFNASVPVSVQATF 140
Query: 138 PIHFCCQ---QPGTFDLVGSIVYEVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTLGI 194
P F QPG +DLVG IVYE+DQ+PYQ+ FYNGT+EVVE+GG +S+ESVFL+TLG+
Sbjct: 141 PYTFAVSKFLQPGAYDLVGYIVYEIDQNPYQNVFYNGTVEVVEAGGLLSVESVFLITLGV 200
Query: 195 ALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEWLQGTAYTQSLSSKSKKKK 253
ALL LFGLW +GQV+QLSKKTKKAPKVE+GTGTTDA+MDEWL+GTA+ Q SKSKKKK
Sbjct: 201 ALLGLFGLWAYGQVQQLSKKTKKAPKVELGTGTTDANMDEWLEGTAFAQ--GSKSKKKK 257
>gi|115469972|ref|NP_001058585.1| Os06g0715500 [Oryza sativa Japonica Group]
gi|53791783|dbj|BAD53577.1| putative SSR alpha subunit [Oryza sativa Japonica Group]
gi|113596625|dbj|BAF20499.1| Os06g0715500 [Oryza sativa Japonica Group]
gi|125598503|gb|EAZ38283.1| hypothetical protein OsJ_22661 [Oryza sativa Japonica Group]
gi|215704734|dbj|BAG94762.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765401|dbj|BAG87098.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765644|dbj|BAG87341.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 257
Score = 329 bits (844), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 159/239 (66%), Positives = 196/239 (82%), Gaps = 6/239 (2%)
Query: 19 PLLQVAKCQSDSETGVAET-EGGDLGIVGEDAQDFGDGTLSPAPGVDTVCIFPKNSARVV 77
P++QVA+ QS E AE +G DLGIV +D Q DG LSPAPGV+TVC+FPKN+ ++V
Sbjct: 21 PVVQVARAQSMEEAATAEVVDGADLGIVSDDTQVSSDGPLSPAPGVETVCVFPKNAGKIV 80
Query: 78 AAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATF 137
AGEETELLVG++N+GES++NV+AI +++HLPFDH + QNLT Q F NA+VPVS QATF
Sbjct: 81 LAGEETELLVGLQNEGESTLNVVAIHSTLHLPFDHKMYGQNLTVQNFFNASVPVSVQATF 140
Query: 138 PIHFCCQ---QPGTFDLVGSIVYEVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTLGI 194
P F QPG +DLVG IVYE+DQ+PYQ+ FYNGT+EVVE+GG +S+ESVFL+TLG+
Sbjct: 141 PYTFAVSKFLQPGAYDLVGYIVYEIDQNPYQNVFYNGTVEVVEAGGLLSVESVFLITLGV 200
Query: 195 ALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEWLQGTAYTQSLSSKSKKKK 253
ALL LFGLW +GQV+QLSKKTKKAPKVE+GTGTTDA+MDEWL+GTA+ Q SKSKKKK
Sbjct: 201 ALLGLFGLWAYGQVQQLSKKTKKAPKVELGTGTTDANMDEWLEGTAFAQ--GSKSKKKK 257
>gi|224105245|ref|XP_002313739.1| predicted protein [Populus trichocarpa]
gi|222850147|gb|EEE87694.1| predicted protein [Populus trichocarpa]
Length = 256
Score = 329 bits (843), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 161/224 (71%), Positives = 185/224 (82%), Gaps = 5/224 (2%)
Query: 22 QVAKCQSDSETGVAET--EGGDLGIVGEDAQDFGDGTLSPAPGVDTVCIFPKNSARVVAA 79
QVA+ QSDS+ VA T E DLGIVGE+AQDFGD S A GVD VC+FPKNSAR+V A
Sbjct: 20 QVARSQSDSDAEVAGTVEEVSDLGIVGENAQDFGDENFSQALGVDVVCVFPKNSARLVNA 79
Query: 80 GEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATFPI 139
GEETELLVG++NDGE + V+ I+ASVHLPFDH LLVQNL+ Q FNNAT+P SAQATFP
Sbjct: 80 GEETELLVGVRNDGELPITVVGIRASVHLPFDHKLLVQNLSAQGFNNATIPASAQATFPY 139
Query: 140 HFCCQ---QPGTFDLVGSIVYEVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTLGIAL 196
F QPG+FDLVG+I++E+DQ PYQSTFYNGTIEVVESGGF+S ESVFLVTLGIAL
Sbjct: 140 IFAVSKYLQPGSFDLVGTIIFEIDQQPYQSTFYNGTIEVVESGGFLSTESVFLVTLGIAL 199
Query: 197 LVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEWLQGTA 240
LVLFGLW+ Q++ LSKK+K+A KVEVGTG DAS+DEWLQGTA
Sbjct: 200 LVLFGLWLQSQIQNLSKKSKRAAKVEVGTGARDASVDEWLQGTA 243
>gi|356538539|ref|XP_003537760.1| PREDICTED: translocon-associated protein subunit alpha-like
[Glycine max]
Length = 258
Score = 327 bits (837), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 169/228 (74%), Positives = 196/228 (85%), Gaps = 4/228 (1%)
Query: 22 QVAKCQSDSETGV-AETEGGDLGIVGEDAQDFGDGTLSPAPGVDTVCIFPKNSARVVAAG 80
QVA+CQSDSE V A E D+GIVG+D QDFGDGT APG++T+ +FPKNSAR++ AG
Sbjct: 23 QVARCQSDSEDVVEAAEESSDIGIVGDDVQDFGDGTFPSAPGIETISVFPKNSARLITAG 82
Query: 81 EETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATFPIH 140
EETELLVG+KNDG+SS+NVIAI+ASVHLPFDH +LVQNLT Q FNN +VP SAQATFP
Sbjct: 83 EETELLVGVKNDGDSSLNVIAIKASVHLPFDHRMLVQNLTAQGFNNGSVPASAQATFPYL 142
Query: 141 FCCQ---QPGTFDLVGSIVYEVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTLGIALL 197
F Q GTFDLVG+I+YE+D+HPYQSTF+NGT+EVVESG F+S+ESVFLVTLG+ALL
Sbjct: 143 FAVSKFLQAGTFDLVGTIIYEIDEHPYQSTFFNGTVEVVESGAFLSMESVFLVTLGVALL 202
Query: 198 VLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEWLQGTAYTQSL 245
VL GLWIHGQ++ LSKKTK+APKVEVGT TTDAS DEWLQGTAYTQSL
Sbjct: 203 VLLGLWIHGQIQYLSKKTKRAPKVEVGTKTTDASTDEWLQGTAYTQSL 250
>gi|388501254|gb|AFK38693.1| unknown [Lotus japonicus]
Length = 258
Score = 326 bits (836), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 167/231 (72%), Positives = 196/231 (84%), Gaps = 4/231 (1%)
Query: 19 PLLQVAKCQSDSETGV-AETEGGDLGIVGEDAQDFGDGTLSPAPGVDTVCIFPKNSARVV 77
PLLQVA CQSDS+ V A E D+GIVG+DAQD+G T + APG++T+ +FPKNSAR+V
Sbjct: 20 PLLQVAMCQSDSDGAVDATDEASDIGIVGDDAQDYGGETFTSAPGIETISVFPKNSARLV 79
Query: 78 AAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATF 137
AGE+TELLVG+KN+GESS+NV+AI+ASVHLPFDH +LVQNLT Q FNN +VP SAQATF
Sbjct: 80 TAGEDTELLVGVKNNGESSLNVVAIRASVHLPFDHRMLVQNLTAQIFNNGSVPSSAQATF 139
Query: 138 PIHFCCQ---QPGTFDLVGSIVYEVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTLGI 194
P F QPGTFDLVGSIVYE++ +PYQ+TF+NGTIEVVE+GGF+SIESVFLVTLG
Sbjct: 140 PYLFAVSKFLQPGTFDLVGSIVYEIEDNPYQTTFFNGTIEVVEAGGFLSIESVFLVTLGA 199
Query: 195 ALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEWLQGTAYTQSL 245
ALLVL GLWIHGQ++ LSKKTK+APKVEVGT + DAS DEWLQGTAY QSL
Sbjct: 200 ALLVLLGLWIHGQIQNLSKKTKRAPKVEVGTRSIDASTDEWLQGTAYAQSL 250
>gi|118482221|gb|ABK93039.1| unknown [Populus trichocarpa]
Length = 256
Score = 325 bits (832), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 159/224 (70%), Positives = 184/224 (82%), Gaps = 5/224 (2%)
Query: 22 QVAKCQSDSETGVAET--EGGDLGIVGEDAQDFGDGTLSPAPGVDTVCIFPKNSARVVAA 79
QVA+ QSDS+ VA T E DLGIVGE+AQDFGD S A GVD VC+FPKNSAR+V A
Sbjct: 20 QVARSQSDSDAEVAGTVEEVSDLGIVGENAQDFGDENFSQALGVDVVCVFPKNSARLVNA 79
Query: 80 GEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATFPI 139
GEETELLVG++NDGE + V+ I+ASVHLPFDH LLVQNL+ Q FNNAT+P SAQATFP
Sbjct: 80 GEETELLVGVRNDGELPITVVGIRASVHLPFDHKLLVQNLSAQGFNNATIPASAQATFPY 139
Query: 140 HFCCQ---QPGTFDLVGSIVYEVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTLGIAL 196
F QPG+FDLVG+I++E+DQ PYQSTFYNGTIEVV+S GF+S ESVFLVTLGIAL
Sbjct: 140 IFAVSKYLQPGSFDLVGTIIFEIDQQPYQSTFYNGTIEVVQSVGFLSTESVFLVTLGIAL 199
Query: 197 LVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEWLQGTA 240
LVLFGLW+ Q++ LSKK+K+A KVEVGTG DAS+DEWLQGTA
Sbjct: 200 LVLFGLWLQSQIQNLSKKSKRAAKVEVGTGARDASVDEWLQGTA 243
>gi|358249030|ref|NP_001239981.1| uncharacterized protein LOC100820543 precursor [Glycine max]
gi|255634887|gb|ACU17802.1| unknown [Glycine max]
Length = 258
Score = 325 bits (832), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 179/247 (72%), Positives = 211/247 (85%), Gaps = 4/247 (1%)
Query: 3 MKNFRVFFFALLLLASPLLQVAKCQSDSETGV-AETEGGDLGIVGEDAQDFGDGTLSPAP 61
+ F VF ALLLLASPLLQVA+CQSDS+ V A E GD+GIVG+D QDFGDGT AP
Sbjct: 4 IDKFWVFALALLLLASPLLQVARCQSDSDDVVEAAEESGDIGIVGDDVQDFGDGTFPSAP 63
Query: 62 GVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTG 121
G++T+ +FPKNSAR++ AGEE+ELLVG+KNDG+SS+NVIAI+ASVHLPFDH +LVQNLT
Sbjct: 64 GIETISVFPKNSARLITAGEESELLVGVKNDGDSSLNVIAIKASVHLPFDHRMLVQNLTA 123
Query: 122 QAFNNATVPVSAQATFPIHFCCQ---QPGTFDLVGSIVYEVDQHPYQSTFYNGTIEVVES 178
Q FNN +VP SAQATFP F Q GTFDLVG+I+YE+D+HP+QSTF+NGT+EVVES
Sbjct: 124 QGFNNGSVPASAQATFPYLFAVSKFLQSGTFDLVGTIIYEIDEHPFQSTFFNGTVEVVES 183
Query: 179 GGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEWLQG 238
G F+S+ESVFLVTLG+ALLVL GLWIHGQ++ LSKKTK+APKVEVGT TTDAS DEWLQG
Sbjct: 184 GAFLSMESVFLVTLGVALLVLLGLWIHGQIQHLSKKTKRAPKVEVGTRTTDASTDEWLQG 243
Query: 239 TAYTQSL 245
TAYTQS+
Sbjct: 244 TAYTQSM 250
>gi|388505806|gb|AFK40969.1| unknown [Medicago truncatula]
Length = 258
Score = 320 bits (821), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 171/256 (66%), Positives = 200/256 (78%), Gaps = 7/256 (2%)
Query: 3 MKNFRVFFFALLLLASPLLQVAKCQSDSETGVAETEGGDLGIVGE---DAQDFGDGTLSP 59
+ F F F L L+ASP LQVA+CQSD A E D+GIVG+ DAQDF DG+
Sbjct: 4 INKFWAFSFLLFLIASPFLQVARCQSDEAVENA-GEVNDIGIVGDETDDAQDFADGSFPS 62
Query: 60 APGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNL 119
APG++T+ +FPKN A++V GEE ELLVG+KNDG+SS+NV+AI+ASVHLP+DH LLVQNL
Sbjct: 63 APGINTIAVFPKNIAKLVKGGEEAELLVGLKNDGQSSLNVVAIKASVHLPYDHRLLVQNL 122
Query: 120 TGQAFNNATVPVSAQATFPIHFCCQ---QPGTFDLVGSIVYEVDQHPYQSTFYNGTIEVV 176
T Q FNN +VP S QATFP F QPG FDLVG+IVYE+DQHPYQ+TFYNGTIEVV
Sbjct: 123 TVQVFNNGSVPSSVQATFPYIFSVSKFLQPGPFDLVGTIVYEIDQHPYQNTFYNGTIEVV 182
Query: 177 ESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEWL 236
E G S+ESVFL TLGIALL+L GLWI+GQ++ LSKKTK++ KVEVGT TTDASMD WL
Sbjct: 183 EPGVLFSMESVFLFTLGIALLILLGLWINGQIQNLSKKTKRSSKVEVGTKTTDASMDGWL 242
Query: 237 QGTAYTQSLSSKSKKK 252
QGTAYTQS SSK KKK
Sbjct: 243 QGTAYTQSTSSKFKKK 258
>gi|357473983|ref|XP_003607276.1| Translocon-associated protein subunit alpha [Medicago truncatula]
gi|355508331|gb|AES89473.1| Translocon-associated protein subunit alpha [Medicago truncatula]
Length = 256
Score = 313 bits (803), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 165/247 (66%), Positives = 199/247 (80%), Gaps = 6/247 (2%)
Query: 3 MKNFRVFFFALLLLASPLLQVAKCQSDSETGVAETEGGDLGIVGEDAQDFGD-GTLSPAP 61
+F +F A L+ASP LQVA+ SD EG D+G+VGE+A DF G SPAP
Sbjct: 4 FNSFWIFSLAFFLIASPFLQVAR--SDEGVDTTTEEGSDIGVVGEEAPDFDSIGDFSPAP 61
Query: 62 GVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTG 121
G+DT+ +FPKN A++V AGE+TELLVG+KN+G+SS+NV+AI+ASVHLP DH LLVQNLT
Sbjct: 62 GIDTISVFPKNFAKLVTAGEDTELLVGVKNNGDSSLNVVAIKASVHLPVDHRLLVQNLTA 121
Query: 122 QAFNNATVPVSAQATFPIHFCCQ---QPGTFDLVGSIVYEVDQHPYQSTFYNGTIEVVES 178
Q FNN +VP SAQATFP F QPG+FDLVG+I+YE+D+ PYQSTF+NGT+EVVE+
Sbjct: 122 QVFNNGSVPASAQATFPYIFAVSKFLQPGSFDLVGTIIYEIDEQPYQSTFFNGTVEVVEA 181
Query: 179 GGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEWLQG 238
GG +SIESVFLVTLG+ALLVL GLWIHGQ++ LSKKTK+APKVEVGT +TDAS DEWLQG
Sbjct: 182 GGILSIESVFLVTLGVALLVLLGLWIHGQIQNLSKKTKRAPKVEVGTRSTDASTDEWLQG 241
Query: 239 TAYTQSL 245
TAYTQSL
Sbjct: 242 TAYTQSL 248
>gi|449454181|ref|XP_004144834.1| PREDICTED: translocon-associated protein subunit alpha-like
[Cucumis sativus]
Length = 259
Score = 312 bits (800), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 160/240 (66%), Positives = 190/240 (79%), Gaps = 8/240 (3%)
Query: 22 QVAKCQSDS--ETGVAETEGGDLGIVG-EDAQDFGDGTLSPAPGVDTVCIFPKNSARVVA 78
+ A CQSDS E+ A + DLGIVG ED+QDFG+ PAPGVDTVC+FPKNSAR+V
Sbjct: 20 KAATCQSDSDVESSEAVEDVSDLGIVGDEDSQDFGEVNFGPAPGVDTVCVFPKNSARIVP 79
Query: 79 AGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATFP 138
AGEET+LL G+KN+GESS+N+IAI+AS+H FDH +L+QNLTGQ F+NATV S QA++P
Sbjct: 80 AGEETQLLAGVKNNGESSLNIIAIKASIHYTFDHRMLIQNLTGQVFHNATVTPSTQASYP 139
Query: 139 IHFCCQ---QPGTFDLVGSIVYEVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTLGIA 195
F QPG FDLVG+I YE+DQ+ YQS FYNGTIEVVE+ G IS+ESVFLV+LGIA
Sbjct: 140 YIFAVSKYLQPGNFDLVGTIFYEIDQNAYQSIFYNGTIEVVEASGIISMESVFLVSLGIA 199
Query: 196 LLVLFGLWIHGQVKQ-LSKKTKKAP-KVEVGTGTTDASMDEWLQGTAYTQSLSSKSKKKK 253
LLVL LWIHGQ++Q LSKK K+A KVEVGT T D SMDEWLQGTAYT+S S+K KKK
Sbjct: 200 LLVLLVLWIHGQIQQKLSKKPKRAASKVEVGTKTVDTSMDEWLQGTAYTKSGSNKLKKKN 259
>gi|217074230|gb|ACJ85475.1| unknown [Medicago truncatula]
Length = 269
Score = 312 bits (800), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 164/247 (66%), Positives = 198/247 (80%), Gaps = 6/247 (2%)
Query: 3 MKNFRVFFFALLLLASPLLQVAKCQSDSETGVAETEGGDLGIVGEDAQDFGD-GTLSPAP 61
+F +F A L+ASP LQVA+ SD EG D+G+VGE+A DF G SPAP
Sbjct: 4 FNSFWIFSLAFFLIASPFLQVAR--SDEGVDTTTEEGSDIGVVGEEAPDFDSIGDFSPAP 61
Query: 62 GVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTG 121
G+DT+ +FPKN A++V AGE+TELLVG+KN+G+SS+NV+AI+ASVHLP DH LLVQNLT
Sbjct: 62 GIDTISVFPKNFAKLVTAGEDTELLVGVKNNGDSSLNVVAIKASVHLPVDHRLLVQNLTA 121
Query: 122 QAFNNATVPVSAQATFPIHFCCQ---QPGTFDLVGSIVYEVDQHPYQSTFYNGTIEVVES 178
Q FNN +VP SAQATFP F QPG+FDLVG+I+YE+D+ PYQSTF+NGT+EVVE+
Sbjct: 122 QVFNNGSVPASAQATFPYIFAVSKFLQPGSFDLVGTIIYEIDEQPYQSTFFNGTVEVVEA 181
Query: 179 GGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEWLQG 238
GG +SIESVFLVTLG+ALLVL GLWIHGQ++ LSKKTK+APK EVGT +TDAS DEWLQG
Sbjct: 182 GGILSIESVFLVTLGVALLVLLGLWIHGQIQNLSKKTKRAPKAEVGTRSTDASTDEWLQG 241
Query: 239 TAYTQSL 245
TAYTQSL
Sbjct: 242 TAYTQSL 248
>gi|357467489|ref|XP_003604029.1| Translocon-associated protein subunit alpha [Medicago truncatula]
gi|217072582|gb|ACJ84651.1| unknown [Medicago truncatula]
gi|355493077|gb|AES74280.1| Translocon-associated protein subunit alpha [Medicago truncatula]
Length = 258
Score = 312 bits (799), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 165/247 (66%), Positives = 194/247 (78%), Gaps = 7/247 (2%)
Query: 3 MKNFRVFFFALLLLASPLLQVAKCQSDSETGVAETEGGDLGIVGE---DAQDFGDGTLSP 59
+ F F F L L+ASP LQVA+CQSD A E D+GIVG+ DAQDF DG+
Sbjct: 4 INKFWTFSFLLFLIASPFLQVARCQSDEAVENA-GEVNDIGIVGDETDDAQDFADGSFPS 62
Query: 60 APGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNL 119
APG++T+ +FPKN A++V GEE ELLVG+KNDG+SS+NV+AI+ASVHLP+DH LLVQNL
Sbjct: 63 APGINTIAVFPKNIAKLVKGGEEAELLVGLKNDGQSSLNVVAIKASVHLPYDHRLLVQNL 122
Query: 120 TGQAFNNATVPVSAQATFPIHFCCQ---QPGTFDLVGSIVYEVDQHPYQSTFYNGTIEVV 176
T Q FNN +VP S QATFP F QPG FDLVG+IVYE+DQHPYQ+TFYNGTIEVV
Sbjct: 123 TVQVFNNGSVPSSVQATFPYIFSVSKFLQPGPFDLVGTIVYEIDQHPYQNTFYNGTIEVV 182
Query: 177 ESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEWL 236
E G S+ESVFL TLGIALL+L GLWI+GQ++ LSKKTK++ KVEVGT TTDASMDEWL
Sbjct: 183 EPGVLFSMESVFLFTLGIALLILLGLWINGQIQNLSKKTKRSSKVEVGTKTTDASMDEWL 242
Query: 237 QGTAYTQ 243
QGTAYTQ
Sbjct: 243 QGTAYTQ 249
>gi|195649319|gb|ACG44127.1| translocon-associated protein alpha subunit precursor [Zea mays]
Length = 258
Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 148/216 (68%), Positives = 183/216 (84%), Gaps = 5/216 (2%)
Query: 41 DLGIVGEDAQDFGDGTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVI 100
DLGIVG+D Q DG LSPAPGV+TV +FPKN+ ++V AGEETELLVG++N+GES++NV+
Sbjct: 44 DLGIVGDDTQVSSDGPLSPAPGVETVVVFPKNAGKIVLAGEETELLVGLQNEGESTLNVV 103
Query: 101 AIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATFPIHFCCQ---QPGTFDLVGSIVY 157
A+ +++HLPFDH++ QNLT Q F NA+VPVS QATFP F QPG +DLVG IVY
Sbjct: 104 AVHSTLHLPFDHNMYGQNLTVQNFFNASVPVSVQATFPYKFVVSKFLQPGAYDLVGYIVY 163
Query: 158 EVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKK 217
E+DQHPYQ+ FYNGTIEVVE+GG +S+ESVFL+TLGIALL LFGLW +GQV+QLSKKTKK
Sbjct: 164 EIDQHPYQNVFYNGTIEVVEAGGLLSVESVFLITLGIALLGLFGLWAYGQVQQLSKKTKK 223
Query: 218 APKVEVGTGTTDASMDEWLQGTAYTQSLSSKSKKKK 253
APKVE+GTGTTDA++DEWL+GT++ Q SKSKKK+
Sbjct: 224 APKVELGTGTTDANIDEWLEGTSFVQ--RSKSKKKQ 257
>gi|388521653|gb|AFK48888.1| unknown [Medicago truncatula]
Length = 256
Score = 310 bits (795), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 164/247 (66%), Positives = 198/247 (80%), Gaps = 6/247 (2%)
Query: 3 MKNFRVFFFALLLLASPLLQVAKCQSDSETGVAETEGGDLGIVGEDAQDFGD-GTLSPAP 61
+F +F A L+ASP LQVA+ SD EG D+G+VGE+A DF G SPAP
Sbjct: 4 FNSFWIFSLAFFLIASPFLQVAR--SDEGVDTTTEEGSDIGVVGEEAPDFDSIGDFSPAP 61
Query: 62 GVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTG 121
G+DT+ +FPKN A++V AGE+TELLVG+KN+G+SS+NV+AI+ASVHLP DH LLVQNLT
Sbjct: 62 GIDTISVFPKNFAKLVTAGEDTELLVGVKNNGDSSLNVVAIKASVHLPVDHRLLVQNLTA 121
Query: 122 QAFNNATVPVSAQATFPIHFCCQ---QPGTFDLVGSIVYEVDQHPYQSTFYNGTIEVVES 178
Q FNN +VP SAQATFP F QPG+FDLVG+I+YE+ + PYQSTF+NGT+EVVE+
Sbjct: 122 QVFNNGSVPASAQATFPYIFAVSKFLQPGSFDLVGTIIYEIGEQPYQSTFFNGTVEVVEA 181
Query: 179 GGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEWLQG 238
GG +SIESVFLVTLG+ALLVL GLWIHGQ++ LSKKTK+APKVEVGT +TDAS DEWLQG
Sbjct: 182 GGILSIESVFLVTLGVALLVLLGLWIHGQIQNLSKKTKRAPKVEVGTRSTDASTDEWLQG 241
Query: 239 TAYTQSL 245
TAYTQSL
Sbjct: 242 TAYTQSL 248
>gi|195611408|gb|ACG27534.1| translocon-associated protein alpha subunit precursor [Zea mays]
Length = 258
Score = 309 bits (792), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 147/216 (68%), Positives = 181/216 (83%), Gaps = 5/216 (2%)
Query: 41 DLGIVGEDAQDFGDGTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVI 100
DLGIVG+D Q DG LSPAPGV+TV +FPKN+ ++V AGEETELLVG++NDGES +NV+
Sbjct: 44 DLGIVGDDTQVSSDGPLSPAPGVETVVVFPKNAGKIVLAGEETELLVGLQNDGESILNVV 103
Query: 101 AIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATFPIHFCCQ---QPGTFDLVGSIVY 157
A+ +++HLPFDH++ QNLT Q F N++VPVS QATFP F QPG +DLVG IVY
Sbjct: 104 AVHSTLHLPFDHNMYGQNLTVQNFFNSSVPVSVQATFPYKFVVSKFLQPGAYDLVGYIVY 163
Query: 158 EVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKK 217
E+DQHPYQ+ FYNGTIEVVE+GG +S+ESVFL+TLG ALL LFGLW +GQV+QLSKKTKK
Sbjct: 164 EIDQHPYQNVFYNGTIEVVEAGGLLSVESVFLITLGFALLGLFGLWAYGQVQQLSKKTKK 223
Query: 218 APKVEVGTGTTDASMDEWLQGTAYTQSLSSKSKKKK 253
APKVE+GTGTTDA++DEWL+GT++ Q SKSKKK+
Sbjct: 224 APKVELGTGTTDANIDEWLEGTSFVQ--RSKSKKKQ 257
>gi|253735735|ref|NP_001141529.2| uncharacterized protein LOC100273641 precursor [Zea mays]
gi|194692616|gb|ACF80392.1| unknown [Zea mays]
gi|413943124|gb|AFW75773.1| translocon-associated protein alpha subunit isoform 1 [Zea mays]
gi|413943125|gb|AFW75774.1| translocon-associated protein alpha subunit isoform 2 [Zea mays]
Length = 258
Score = 309 bits (791), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 147/216 (68%), Positives = 181/216 (83%), Gaps = 5/216 (2%)
Query: 41 DLGIVGEDAQDFGDGTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVI 100
DLGIVG+D Q DG LSPAPGV+TV +FPKN+ ++V AGEETELLVG++NDGES +NV+
Sbjct: 44 DLGIVGDDTQVSSDGPLSPAPGVETVVVFPKNAGKIVLAGEETELLVGLQNDGESILNVV 103
Query: 101 AIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATFPIHFCCQ---QPGTFDLVGSIVY 157
A+ +++HLPFDH++ QNLT Q F N++VPVS QATFP F QPG +DLVG IVY
Sbjct: 104 AVHSTLHLPFDHNMYGQNLTVQNFFNSSVPVSVQATFPYKFVVSKFLQPGAYDLVGYIVY 163
Query: 158 EVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKK 217
E+DQHPYQ+ FYNGTIEVVE+GG +S+ESVFL+TLG ALL LFGLW +GQV+QLSKKTKK
Sbjct: 164 EIDQHPYQNVFYNGTIEVVEAGGLLSVESVFLITLGFALLGLFGLWAYGQVQQLSKKTKK 223
Query: 218 APKVEVGTGTTDASMDEWLQGTAYTQSLSSKSKKKK 253
APKVE+GTGTTDA++DEWL+GT++ Q SKSKKK+
Sbjct: 224 APKVELGTGTTDANIDEWLEGTSFVQ--RSKSKKKQ 257
>gi|194695842|gb|ACF82005.1| unknown [Zea mays]
gi|413934946|gb|AFW69497.1| translocon-associated protein alpha subunit [Zea mays]
Length = 265
Score = 308 bits (789), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 180/214 (84%), Gaps = 5/214 (2%)
Query: 41 DLGIVGEDAQDFGDGTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVI 100
DLGIVG+D Q DG LSPAPGV+TV +FPKN+ ++V AGEETELLVG++N+GES++NV+
Sbjct: 44 DLGIVGDDTQVSSDGPLSPAPGVETVVVFPKNAGKIVLAGEETELLVGLQNEGESTLNVV 103
Query: 101 AIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATFPIHFCCQ---QPGTFDLVGSIVY 157
A+ +++HLPFDH++ QNLT Q F NA+VPVS QATFP F QPG +DLVG IVY
Sbjct: 104 AVHSTLHLPFDHNMYGQNLTVQNFFNASVPVSVQATFPYKFVVSKFLQPGAYDLVGYIVY 163
Query: 158 EVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKK 217
E+DQHPYQ+ FYNGTIEVVE+GG +S+ESVFL+TLG ALL LFGLW +GQV+QLSKKTKK
Sbjct: 164 EIDQHPYQNVFYNGTIEVVEAGGLLSVESVFLITLGTALLGLFGLWAYGQVQQLSKKTKK 223
Query: 218 APKVEVGTGTTDASMDEWLQGTAYTQSLSSKSKK 251
APKVE+GTGTTDA++DEWL+GT++ Q SKSKK
Sbjct: 224 APKVELGTGTTDANIDEWLEGTSFVQ--RSKSKK 255
>gi|242094208|ref|XP_002437594.1| hypothetical protein SORBIDRAFT_10g030160 [Sorghum bicolor]
gi|241915817|gb|EER88961.1| hypothetical protein SORBIDRAFT_10g030160 [Sorghum bicolor]
Length = 258
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 146/216 (67%), Positives = 180/216 (83%), Gaps = 5/216 (2%)
Query: 41 DLGIVGEDAQDFGDGTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVI 100
DLGIVG+D Q DG LSPA GV+TV +FPKN+ ++V AGEETELLVG++NDGES++NV+
Sbjct: 44 DLGIVGDDTQVSSDGPLSPASGVETVVVFPKNAGKIVPAGEETELLVGLQNDGESTLNVV 103
Query: 101 AIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATFPIHFCCQ---QPGTFDLVGSIVY 157
A+ +++HLPFDH + QNLT Q F NA+VPVS QATFP F QPG +DLVG IVY
Sbjct: 104 AVHSTLHLPFDHRMYGQNLTVQNFFNASVPVSVQATFPYKFVVSKFLQPGAYDLVGYIVY 163
Query: 158 EVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKK 217
E+DQHPYQ+ FYNGT+EVVE+GG +S+ESVFL+TLGIALL LFGLW +GQV+Q SKKTKK
Sbjct: 164 EIDQHPYQNVFYNGTVEVVEAGGLLSVESVFLITLGIALLGLFGLWAYGQVQQFSKKTKK 223
Query: 218 APKVEVGTGTTDASMDEWLQGTAYTQSLSSKSKKKK 253
APKVE+GTGTTDA++DEWL+GT++ Q SKSKKK+
Sbjct: 224 APKVELGTGTTDANIDEWLEGTSFVQ--RSKSKKKQ 257
>gi|195619136|gb|ACG31398.1| translocon-associated protein alpha subunit precursor [Zea mays]
Length = 258
Score = 306 bits (784), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 146/216 (67%), Positives = 180/216 (83%), Gaps = 5/216 (2%)
Query: 41 DLGIVGEDAQDFGDGTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVI 100
DLGIVG+D Q DG LSPAPGV+TV +FPKN+ ++V AGEETELLVG++NDGES +NV+
Sbjct: 44 DLGIVGDDTQVSSDGPLSPAPGVETVVVFPKNAGKIVLAGEETELLVGLQNDGESILNVV 103
Query: 101 AIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATFPIHFCCQ---QPGTFDLVGSIVY 157
A+ +++HLPFDH++ QNLT Q F N++VPVS QATFP F QPG +DLVG IVY
Sbjct: 104 AVHSTLHLPFDHNMYGQNLTVQNFFNSSVPVSVQATFPYKFVVSKFLQPGAYDLVGYIVY 163
Query: 158 EVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKK 217
E+DQHPYQ+ FYNGTIEVVE+ G +S+ESVFL+TLG ALL LFGLW +GQV+QLSKKTKK
Sbjct: 164 EIDQHPYQNVFYNGTIEVVEAVGLLSVESVFLITLGFALLGLFGLWAYGQVQQLSKKTKK 223
Query: 218 APKVEVGTGTTDASMDEWLQGTAYTQSLSSKSKKKK 253
APKVE+GTGTTDA++DEWL+GT++ Q SKSKKK+
Sbjct: 224 APKVELGTGTTDANIDEWLEGTSFVQ--RSKSKKKQ 257
>gi|326490545|dbj|BAJ84936.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326498061|dbj|BAJ94893.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326514726|dbj|BAJ99724.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 255
Score = 301 bits (772), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 154/252 (61%), Positives = 198/252 (78%), Gaps = 8/252 (3%)
Query: 7 RVFFFALLLL----ASPLLQVAKCQSDSETGVAET-EGGDLGIVGEDAQDFGDGTLSPAP 61
RV+ A+LL+ ASP QVA+ QS+ + + E +G DLG VG+D + LSPAP
Sbjct: 4 RVWLSAILLVFLLAASPFAQVARAQSEEDAAMQEVVDGADLGYVGDDTPVSSEEPLSPAP 63
Query: 62 GVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTG 121
GV+TVC+FPKN+ ++V AGEETELLVG++N+GES++NV+A+ +++HLP+DH + QNLT
Sbjct: 64 GVETVCVFPKNAGKIVPAGEETELLVGLQNEGESTLNVVAVHSTLHLPYDHKMYGQNLTV 123
Query: 122 QAFNNATVPVSAQATFPIHFCCQ---QPGTFDLVGSIVYEVDQHPYQSTFYNGTIEVVES 178
Q+F NA+VPVS QATFP F QPG +DLVG IVYE+DQHPYQ+ FYNGTIEVVE
Sbjct: 124 QSFYNASVPVSVQATFPYTFAVSKFLQPGAYDLVGYIVYEIDQHPYQNVFYNGTIEVVEV 183
Query: 179 GGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEWLQG 238
GG +S+ESVFL+TLGIALL L GLW +GQV+QLSKKTKK PKVE+GTGTTDA+MDEWL+G
Sbjct: 184 GGLLSVESVFLITLGIALLGLLGLWAYGQVQQLSKKTKKGPKVELGTGTTDANMDEWLEG 243
Query: 239 TAYTQSLSSKSK 250
TA+ + + K+K
Sbjct: 244 TAFAKDKAKKNK 255
>gi|357123755|ref|XP_003563573.1| PREDICTED: translocon-associated protein subunit alpha-like
[Brachypodium distachyon]
Length = 255
Score = 298 bits (764), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 152/236 (64%), Positives = 189/236 (80%), Gaps = 4/236 (1%)
Query: 19 PLLQVAKCQSDSETGVAET-EGGDLGIVGEDAQDFGDGTLSPAPGVDTVCIFPKNSARVV 77
P QV + QS+ + +AE EG DLGIVG+D DG LSPA GV+TVC+FPKN+ ++V
Sbjct: 20 PFAQVGRAQSEEDDAMAEVVEGADLGIVGDDTPVSSDGPLSPASGVETVCVFPKNAGKIV 79
Query: 78 AAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATF 137
AGEETELLVG++N+GES++NV+A+ +++HLP+DH + QNLT Q F NA+VPVS QATF
Sbjct: 80 PAGEETELLVGLQNEGESTLNVVAVHSTLHLPYDHRMYGQNLTVQNFFNASVPVSVQATF 139
Query: 138 PIHFCCQ---QPGTFDLVGSIVYEVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTLGI 194
P F QPG +DLVG IVYE+DQHPYQ+ FYNGTIEVVE GG +S+ESVFL+TLGI
Sbjct: 140 PYTFAVSKFLQPGAYDLVGYIVYEIDQHPYQNVFYNGTIEVVEVGGLLSVESVFLITLGI 199
Query: 195 ALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEWLQGTAYTQSLSSKSK 250
ALL L GLW +GQV+QLSKKTKKAPKVE+GTGTTDA+MDEWL+GTA+ + S K+K
Sbjct: 200 ALLGLLGLWAYGQVQQLSKKTKKAPKVELGTGTTDANMDEWLEGTAFAKGKSKKNK 255
>gi|79557255|ref|NP_179250.2| Translocon-associated protein (TRAP), alpha subunit [Arabidopsis
thaliana]
gi|50897256|gb|AAT85767.1| At2g16595 [Arabidopsis thaliana]
gi|330251422|gb|AEC06516.1| Translocon-associated protein (TRAP), alpha subunit [Arabidopsis
thaliana]
Length = 251
Score = 256 bits (654), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 127/229 (55%), Positives = 165/229 (72%), Gaps = 6/229 (2%)
Query: 18 SPLLQVAKCQSDSETGVAETEGGDLGIVGEDAQDFGDGTLSPAPGVDTVCIFPKNSARVV 77
SP L+VA CQSDSE E D+G DA++ L+ APG++T+C+FPKNSA+++
Sbjct: 17 SPFLKVALCQSDSEDSGFEV--SDVGEEESDAEEVFGLELTSAPGIETLCVFPKNSAKII 74
Query: 78 AAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATF 137
AG ETELLVGMKNDG+S+V+++A++ S+HLPFD + VQNLT +F+NA+VP SAQAT
Sbjct: 75 KAGVETELLVGMKNDGQSNVDIVAVKGSLHLPFDQNA-VQNLTALSFSNASVPTSAQATL 133
Query: 138 PIHFCCQ---QPGTFDLVGSIVYEVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTLGI 194
P F Q G FD VG+I+YE+D PYQS FYNGTIEVVE G +ESVFL L I
Sbjct: 134 PYAFAVSKFLQAGAFDFVGTIIYEIDGKPYQSIFYNGTIEVVEDGPLFRMESVFLSGLLI 193
Query: 195 ALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEWLQGTAYTQ 243
++ ++I +K ++KKTK+APKVEVGT T DAS DEWL+GT+YTQ
Sbjct: 194 FVIAFLAIYIQNVLKHMTKKTKRAPKVEVGTATKDASHDEWLEGTSYTQ 242
>gi|297832252|ref|XP_002884008.1| hypothetical protein ARALYDRAFT_480545 [Arabidopsis lyrata subsp.
lyrata]
gi|297329848|gb|EFH60267.1| hypothetical protein ARALYDRAFT_480545 [Arabidopsis lyrata subsp.
lyrata]
Length = 251
Score = 249 bits (637), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 128/229 (55%), Positives = 167/229 (72%), Gaps = 6/229 (2%)
Query: 18 SPLLQVAKCQSDSETGVAETEGGDLGIVGEDAQDFGDGTLSPAPGVDTVCIFPKNSARVV 77
SP L+VA CQSDSE E D+ DA++ LS APG++T+C+FPKNSA+++
Sbjct: 17 SPFLKVALCQSDSEDSGFEV--SDVSEEESDAEEAFGLELSSAPGIETLCVFPKNSAKII 74
Query: 78 AAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATF 137
AG ETE+LVGMKNDG+S+V+++A++ S+HLPFD + VQNLT +F+NA+VP SAQATF
Sbjct: 75 KAGVETEVLVGMKNDGQSNVDIVAVKGSLHLPFDQNA-VQNLTALSFSNASVPTSAQATF 133
Query: 138 PIHFCCQ---QPGTFDLVGSIVYEVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTLGI 194
P F Q G FDLVG+I+YE+D PYQSTFYNGTIEVVE +ESVFL L I
Sbjct: 134 PYVFAVSKFLQAGAFDLVGTIIYEIDGKPYQSTFYNGTIEVVEDSPLFRMESVFLSGLLI 193
Query: 195 ALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEWLQGTAYTQ 243
++VL ++I +K ++KK K+APKVEVGT T +AS DEWL+GT+YTQ
Sbjct: 194 FVIVLLAIYIQNGLKHMTKKAKRAPKVEVGTATKNASHDEWLEGTSYTQ 242
>gi|297821307|ref|XP_002878536.1| hypothetical protein ARALYDRAFT_480966 [Arabidopsis lyrata subsp.
lyrata]
gi|297324375|gb|EFH54795.1| hypothetical protein ARALYDRAFT_480966 [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 147/242 (60%), Positives = 182/242 (75%), Gaps = 14/242 (5%)
Query: 22 QVAKCQSDSETGVAETEGGDLGIVGEDAQDFG-------DGTLSPAPGVDTVCIFPKNSA 74
QVA+CQSD+E + + +VGE++ D D LS PGV+TVC+FPKNSA
Sbjct: 20 QVARCQSDAEDHSSLVDD----VVGENSDDAVEEDDHDLDMNLSSFPGVETVCVFPKNSA 75
Query: 75 RVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQ 134
++V AGEETELLVG+KN+G++SV V+ I+ASVHLP+DH LLVQNLT FNNA++P S Q
Sbjct: 76 KLVPAGEETELLVGLKNEGKTSVGVMGIRASVHLPYDHKLLVQNLTMLRFNNASIPTSLQ 135
Query: 135 ATFPIHFCCQQ---PGTFDLVGSIVYEVDQHPYQSTFYNGTIEVVESGGFISIESVFLVT 191
ATFP F Q PG FDLVG I+Y+V+ PYQS FYNGTIEVVESGG +S ESVFL+T
Sbjct: 136 ATFPYIFAVSQYLQPGAFDLVGYIIYDVEGKPYQSVFYNGTIEVVESGGLLSGESVFLIT 195
Query: 192 LGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEWLQGTAYTQSLSSKSKK 251
LGI LL+L GLW + QV++L+KKTKK KVEVGT +TDAS+DEWL+GT ++LS KSK
Sbjct: 196 LGIGLLLLLGLWAYSQVQRLTKKTKKVSKVEVGTRSTDASLDEWLEGTTLAKTLSGKSKN 255
Query: 252 KK 253
KK
Sbjct: 256 KK 257
>gi|21555380|gb|AAM63845.1| putative signal sequence receptor, alpha subunit (SSR-alpha)
[Arabidopsis thaliana]
Length = 258
Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 145/239 (60%), Positives = 179/239 (74%), Gaps = 8/239 (3%)
Query: 22 QVAKCQSDSE---TGVAETEGGDLG-IVGEDAQDFGDGTLSPAPGVDTVCIFPKNSARVV 77
QVA+CQSD+E + V + G + V ED D D LS PGV+TVC+FPKNSA++V
Sbjct: 20 QVARCQSDAEDHSSLVDDVVGENTDDAVEEDDHDL-DMNLSSFPGVETVCVFPKNSAKLV 78
Query: 78 AAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATF 137
AGEETELLVG+KN+G++ V V+ I+ASVHLP+DH LLVQNLT NNA++P S QATF
Sbjct: 79 PAGEETELLVGLKNEGKTRVGVMGIRASVHLPYDHKLLVQNLTMLRLNNASIPTSLQATF 138
Query: 138 PIHFCCQQ---PGTFDLVGSIVYEVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTLGI 194
P F Q PG FDLVG I+Y+V+ PYQS FYNGTIEVVESGG +S ESVFL+TLGI
Sbjct: 139 PYIFAVSQYLQPGAFDLVGYIIYDVEGKPYQSVFYNGTIEVVESGGLLSGESVFLLTLGI 198
Query: 195 ALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEWLQGTAYTQSLSSKSKKKK 253
LL+L GLW + QV++L+KKTKK KVEVGT +TDAS+DEWL+GT ++ S K+K KK
Sbjct: 199 GLLLLLGLWAYSQVQRLTKKTKKVSKVEVGTRSTDASLDEWLEGTTLAKTSSGKTKNKK 257
>gi|547391|gb|AAA21820.1| alpha-subunit; putative, partial [Arabidopsis thaliana]
Length = 253
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 144/239 (60%), Positives = 179/239 (74%), Gaps = 8/239 (3%)
Query: 22 QVAKCQSDSE---TGVAETEGGDLG-IVGEDAQDFGDGTLSPAPGVDTVCIFPKNSARVV 77
QVA+CQSD+E + V + G + V ED D D LS PGV+TVC+FPKNSA++V
Sbjct: 15 QVARCQSDAEDHSSLVDDVVGENTDDAVEEDDHDL-DMNLSSFPGVETVCVFPKNSAKLV 73
Query: 78 AAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATF 137
AGEETELLVG+KN+G++ V V+ I+ASVHLP+DH LLVQNLT NNA++P S QATF
Sbjct: 74 PAGEETELLVGLKNEGKTRVGVMGIRASVHLPYDHKLLVQNLTMLRLNNASIPTSLQATF 133
Query: 138 PIHFCCQQ---PGTFDLVGSIVYEVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTLGI 194
P F Q PG FDLVG I+Y+V+ PYQS FYNGTIEVVESGG +S ESVFL+TLGI
Sbjct: 134 PYIFAVSQYLQPGAFDLVGYIIYDVEGKPYQSVFYNGTIEVVESGGLLSGESVFLLTLGI 193
Query: 195 ALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEWLQGTAYTQSLSSKSKKKK 253
LL+L GLW + QV++L+KKTKK KVEVGT +T+AS+DEWL+GT ++ S K+K KK
Sbjct: 194 GLLLLLGLWAYSQVQRLTKKTKKVSKVEVGTRSTEASLDEWLEGTTLAKTSSGKTKNKK 252
>gi|18399609|ref|NP_565498.1| translocon-associated protein subunit alpha [Arabidopsis thaliana]
gi|26007030|sp|P45434.3|SSRA_ARATH RecName: Full=Translocon-associated protein subunit alpha;
Short=TRAP-alpha; AltName: Full=Signal sequence receptor
subunit alpha; Short=SSR-alpha; Flags: Precursor
gi|15215646|gb|AAK91368.1| At2g21160/F26H11.8 [Arabidopsis thaliana]
gi|20197721|gb|AAD29800.2| putative signal sequence receptor, alpha subunit (SSR-alpha)
[Arabidopsis thaliana]
gi|56744216|gb|AAW28548.1| At2g21160 [Arabidopsis thaliana]
gi|330252035|gb|AEC07129.1| translocon-associated protein subunit alpha [Arabidopsis thaliana]
Length = 258
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 144/239 (60%), Positives = 179/239 (74%), Gaps = 8/239 (3%)
Query: 22 QVAKCQSDSE---TGVAETEGGDLG-IVGEDAQDFGDGTLSPAPGVDTVCIFPKNSARVV 77
QVA+CQSD+E + V + G + V ED D D LS PGV+TVC+FPKNSA++V
Sbjct: 20 QVARCQSDAEDHSSLVDDVVGENTDDAVEEDDHDL-DMNLSSFPGVETVCVFPKNSAKLV 78
Query: 78 AAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATF 137
AGEETELLVG+KN+G++ V V+ I+ASVHLP+DH LLVQNLT NNA++P S QATF
Sbjct: 79 PAGEETELLVGLKNEGKTRVGVMGIRASVHLPYDHKLLVQNLTMLRLNNASIPTSLQATF 138
Query: 138 PIHFCCQQ---PGTFDLVGSIVYEVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTLGI 194
P F Q PG FDLVG I+Y+V+ PYQS FYNGTIEVVESGG +S ESVFL+TLGI
Sbjct: 139 PYIFAVSQYLQPGAFDLVGYIIYDVEGKPYQSVFYNGTIEVVESGGLLSGESVFLLTLGI 198
Query: 195 ALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEWLQGTAYTQSLSSKSKKKK 253
LL+L GLW + QV++L+KKTKK KVEVGT +T+AS+DEWL+GT ++ S K+K KK
Sbjct: 199 GLLLLLGLWAYSQVQRLTKKTKKVSKVEVGTRSTEASLDEWLEGTTLAKTSSGKTKNKK 257
>gi|212721520|ref|NP_001131875.1| translocon-associated protein homolog1 precursor [Zea mays]
gi|194692794|gb|ACF80481.1| unknown [Zea mays]
gi|413934948|gb|AFW69499.1| translocon-associated protein-like protein [Zea mays]
Length = 205
Score = 233 bits (593), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 111/162 (68%), Positives = 136/162 (83%), Gaps = 5/162 (3%)
Query: 93 GESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATFPIHFCCQ---QPGTF 149
GES++NV+A+ +++HLPFDH++ QNLT Q F NA+VPVS QATFP F QPG +
Sbjct: 36 GESTLNVVAVHSTLHLPFDHNMYGQNLTVQNFFNASVPVSVQATFPYKFVVSKFLQPGAY 95
Query: 150 DLVGSIVYEVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVK 209
DLVG IVYE+DQHPYQ+ FYNGTIEVVE+GG +S+ESVFL+TLG ALL LFGLW +GQV+
Sbjct: 96 DLVGYIVYEIDQHPYQNVFYNGTIEVVEAGGLLSVESVFLITLGTALLGLFGLWAYGQVQ 155
Query: 210 QLSKKTKKAPKVEVGTGTTDASMDEWLQGTAYTQSLSSKSKK 251
QLSKKTKKAPKVE+GTGTTDA++DEWL+GT++ Q SKSKK
Sbjct: 156 QLSKKTKKAPKVELGTGTTDANIDEWLEGTSFVQ--RSKSKK 195
>gi|388504700|gb|AFK40416.1| unknown [Medicago truncatula]
Length = 179
Score = 223 bits (567), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 110/177 (62%), Positives = 132/177 (74%), Gaps = 7/177 (3%)
Query: 3 MKNFRVFFFALLLLASPLLQVAKCQSDSETGVAETEGGDLGIVGE---DAQDFGDGTLSP 59
+ F F F L L+ASP QVA+CQSD A E D+GIVG+ DAQDF DG+
Sbjct: 4 INKFWTFSFLLFLIASPFFQVARCQSDEAVENA-GEVNDIGIVGDETDDAQDFADGSFPS 62
Query: 60 APGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNL 119
APG++T+ +FPKN A++V GEE ELLVG+KNDG+SS+NV+AI+ASVHLP+DH LLVQNL
Sbjct: 63 APGINTIAVFPKNIAKLVKGGEEAELLVGLKNDGQSSLNVVAIKASVHLPYDHRLLVQNL 122
Query: 120 TGQAFNNATVPVSAQATFPIHFCCQ---QPGTFDLVGSIVYEVDQHPYQSTFYNGTI 173
T Q FNN +VP S QATFP F QPG FDLVG+IVYE+DQHPYQ+TFYNGTI
Sbjct: 123 TVQVFNNGSVPSSVQATFPYIFSVSKFLQPGPFDLVGTIVYEIDQHPYQNTFYNGTI 179
>gi|238908777|gb|ACR77729.1| unknown [Zea mays]
gi|413943123|gb|AFW75772.1| hypothetical protein ZEAMMB73_895966 [Zea mays]
Length = 142
Score = 203 bits (516), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 99/140 (70%), Positives = 117/140 (83%), Gaps = 5/140 (3%)
Query: 117 QNLTGQAFNNATVPVSAQATFPIHFCCQ---QPGTFDLVGSIVYEVDQHPYQSTFYNGTI 173
QNLT Q F N++VPVS QATFP F QPG +DLVG IVYE+DQHPYQ+ FYNGTI
Sbjct: 4 QNLTVQNFFNSSVPVSVQATFPYKFVVSKFLQPGAYDLVGYIVYEIDQHPYQNVFYNGTI 63
Query: 174 EVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMD 233
EVVE+GG +S+ESVFL+TLG ALL LFGLW +GQV+QLSKKTKKAPKVE+GTGTTDA++D
Sbjct: 64 EVVEAGGLLSVESVFLITLGFALLGLFGLWAYGQVQQLSKKTKKAPKVELGTGTTDANID 123
Query: 234 EWLQGTAYTQSLSSKSKKKK 253
EWL+GT++ Q SKSKKK+
Sbjct: 124 EWLEGTSFVQ--RSKSKKKQ 141
>gi|145329202|ref|NP_001077930.1| translocon-associated protein subunit alpha [Arabidopsis thaliana]
gi|330252036|gb|AEC07130.1| translocon-associated protein subunit alpha [Arabidopsis thaliana]
Length = 188
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 100/166 (60%), Positives = 120/166 (72%), Gaps = 8/166 (4%)
Query: 22 QVAKCQSDSETG---VAETEGGDLG-IVGEDAQDFGDGTLSPAPGVDTVCIFPKNSARVV 77
QVA+CQSD+E V + G + V ED D D LS PGV+TVC+FPKNSA++V
Sbjct: 20 QVARCQSDAEDHSSLVDDVVGENTDDAVEEDDHDL-DMNLSSFPGVETVCVFPKNSAKLV 78
Query: 78 AAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATF 137
AGEETELLVG+KN+G++ V V+ I+ASVHLP+DH LLVQNLT NNA++P S QATF
Sbjct: 79 PAGEETELLVGLKNEGKTRVGVMGIRASVHLPYDHKLLVQNLTMLRLNNASIPTSLQATF 138
Query: 138 PIHFCCQ---QPGTFDLVGSIVYEVDQHPYQSTFYNGTIEVVESGG 180
P F QPG FDLVG I+Y+V+ PYQS FYNGTIEVVESGG
Sbjct: 139 PYIFAVSQYLQPGAFDLVGYIIYDVEGKPYQSVFYNGTIEVVESGG 184
>gi|449530142|ref|XP_004172055.1| PREDICTED: translocon-associated protein subunit alpha-like,
partial [Cucumis sativus]
Length = 136
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/134 (68%), Positives = 106/134 (79%), Gaps = 5/134 (3%)
Query: 124 FNNATVPVSAQATFPIHFCCQ---QPGTFDLVGSIVYEVDQHPYQSTFYNGTIEVVESGG 180
F+NATV S QA++P F QPG FDLVG+I YE+DQ+ YQS FYNGTIEVVE+ G
Sbjct: 2 FHNATVTPSTQASYPYIFAVSKYLQPGNFDLVGTIFYEIDQNAYQSIFYNGTIEVVEASG 61
Query: 181 FISIESVFLVTLGIALLVLFGLWIHGQVKQ-LSKKTKKAP-KVEVGTGTTDASMDEWLQG 238
IS+ESVFLV+LGIALLVL LWIHGQ++Q LSKK K+A KVEVGT T D SMDEWLQG
Sbjct: 62 IISMESVFLVSLGIALLVLLVLWIHGQIQQKLSKKPKRAASKVEVGTKTVDTSMDEWLQG 121
Query: 239 TAYTQSLSSKSKKK 252
TAYT+S S+K KKK
Sbjct: 122 TAYTKSGSNKLKKK 135
>gi|168046242|ref|XP_001775583.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673001|gb|EDQ59530.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 278
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/205 (43%), Positives = 131/205 (63%), Gaps = 6/205 (2%)
Query: 54 DGTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHS 113
D + APGV FPKN VV AGE T++L+ + NDG + V ++AS+HLP DH
Sbjct: 56 DKYIGAAPGVVAAVYFPKNLNNVVKAGEPTQVLINITNDGAGPMQVQYVRASLHLPHDHR 115
Query: 114 LLVQNLTGQAFNNATVPVSAQATFPIHFCC---QQPGTFDLVGSIVYEVDQHPYQSTFYN 170
+++QN T Q ++ +++P +ATF F QPG +D VG +YE+D Y F+N
Sbjct: 116 VIIQNFTVQEYS-SSIPQGNKATFSYWFGVVKFLQPGNYDFVGKFIYELDNKAYTHVFFN 174
Query: 171 GTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKK-APKVEVGTGT-T 228
TI++VESGGF+S E++FL TLG+ LL G+W++ +V+ L KK K+ + KVE GT T +
Sbjct: 175 STIDIVESGGFVSGETIFLSTLGLGLLGYLGMWVYSKVQDLIKKQKRSSKKVETGTRTNS 234
Query: 229 DASMDEWLQGTAYTQSLSSKSKKKK 253
DA EWLQGT++TQ LS +++
Sbjct: 235 DAHASEWLQGTSFTQKLSKNISQQR 259
>gi|168049291|ref|XP_001777097.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671540|gb|EDQ58090.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 346
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/206 (43%), Positives = 134/206 (65%), Gaps = 7/206 (3%)
Query: 54 DGTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHS 113
D + APGV+ FPKN VV +GE T++L+ + NDG + V I+AS+HLP DH
Sbjct: 57 DKHIGAAPGVEASVYFPKNLNNVVKSGEPTQILINITNDGAGPMQVQYIRASLHLPNDHR 116
Query: 114 LLVQNLTGQAFNNATVPVSAQATFPIHFCC---QQPGTFDLVGSIVYEVDQHPYQSTFYN 170
+++QN T Q ++ +++P + TF F QPG +D VG I+YE++ Y FYN
Sbjct: 117 VIIQNFTVQEYS-SSIPQGNKVTFSYWFGVVKFLQPGNYDFVGKIIYELENKAYTHVFYN 175
Query: 171 GTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKK-APKVEVGTGT-T 228
TI+VVESGGF+S E++FL +LG+ LL L G+W + +V+ KK ++ + KVE GT T +
Sbjct: 176 STIDVVESGGFVSGETIFLSSLGLGLLGLLGMWAYSKVQDFIKKQRRSSKKVETGTRTNS 235
Query: 229 DASMDEWLQGTAYTQSLSSK-SKKKK 253
DA +EWL+GT++TQ LS S+++K
Sbjct: 236 DAHANEWLKGTSFTQKLSRNISQQRK 261
>gi|20197462|gb|AAM15085.1| putative TRAP protein [Arabidopsis thaliana]
gi|20198182|gb|AAM15448.1| putative TRAP protein [Arabidopsis thaliana]
Length = 140
Score = 149 bits (377), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 71/125 (56%), Positives = 89/125 (71%), Gaps = 3/125 (2%)
Query: 122 QAFNNATVPVSAQATFPIHFCCQ---QPGTFDLVGSIVYEVDQHPYQSTFYNGTIEVVES 178
++F+NA+VP SAQAT P F Q G FD VG+I+YE+D PYQS FYNGTIEVVE
Sbjct: 7 RSFSNASVPTSAQATLPYAFAVSKFLQAGAFDFVGTIIYEIDGKPYQSIFYNGTIEVVED 66
Query: 179 GGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEWLQG 238
G +ESVFL L I ++ ++I +K ++KKTK+APKVEVGT T DAS DEWL+G
Sbjct: 67 GPLFRMESVFLSGLLIFVIAFLAIYIQNVLKHMTKKTKRAPKVEVGTATKDASHDEWLEG 126
Query: 239 TAYTQ 243
T+YTQ
Sbjct: 127 TSYTQ 131
>gi|449507034|ref|XP_004162915.1| PREDICTED: translocon-associated protein subunit alpha-like
[Cucumis sativus]
Length = 133
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/104 (65%), Positives = 84/104 (80%), Gaps = 3/104 (2%)
Query: 22 QVAKCQSDS--ETGVAETEGGDLGIVG-EDAQDFGDGTLSPAPGVDTVCIFPKNSARVVA 78
+ A CQSDS E+ A + DLGIVG ED+QDFG+ PAPGVDTVC+FPKNSAR+V
Sbjct: 20 KAATCQSDSDVESSEAVEDVSDLGIVGDEDSQDFGEVNFGPAPGVDTVCVFPKNSARIVP 79
Query: 79 AGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQ 122
AGEET+LL G+KN+GESS+N+IAI+AS+H FDH +L+QNLTGQ
Sbjct: 80 AGEETQLLAGVKNNGESSLNIIAIKASIHYTFDHRMLIQNLTGQ 123
>gi|168054497|ref|XP_001779667.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668865|gb|EDQ55463.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 431
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 122/194 (62%), Gaps = 6/194 (3%)
Query: 49 AQDFGDGTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHL 108
++ F + + +PGV T FPKN +VV GE T++ + + NDG++ + VI +AS+HL
Sbjct: 99 SEKFVEANVKASPGVQTSSYFPKNPLKVVKPGERTQVDIDVINDGQAPLKVIYTRASIHL 158
Query: 109 PFDHSLLVQNLTGQAFNNATVPVSAQATFPIHFCCQ---QPGTFDLVGSIVYEVDQHPYQ 165
P DH L+VQN T Q V ++ ++ F Q G +DLVG +VYE+D Y+
Sbjct: 159 PHDHRLIVQNFTVQE-GTTIVTTGSKGSYSYSFSSNKLLQAGIYDLVGYVVYEIDGGLYK 217
Query: 166 STFYNGTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPK-VEVG 224
+ F+NG+I+V+E+GGF+ E++FL +LG+ +L L G+W + Q + KK K++ K VE G
Sbjct: 218 NVFHNGSIDVLENGGFVKGETIFLCSLGLGILGLLGMWAYSQAQNFLKKRKRSYKRVETG 277
Query: 225 TGTTDASM-DEWLQ 237
T ++ ++ ++WLQ
Sbjct: 278 TRSSSGALTNDWLQ 291
>gi|66810678|ref|XP_639046.1| translocon-associated protein TRAP alpha subunit [Dictyostelium
discoideum AX4]
gi|74854643|sp|Q54R45.1|SSRA_DICDI RecName: Full=Translocon-associated protein subunit alpha;
Short=TRAP-alpha; AltName: Full=Signal sequence receptor
subunit alpha; Short=SSR-alpha; Flags: Precursor
gi|60467714|gb|EAL65733.1| translocon-associated protein TRAP alpha subunit [Dictyostelium
discoideum AX4]
Length = 236
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 93/192 (48%), Gaps = 15/192 (7%)
Query: 58 SPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQ 117
+P V IFP N + AAG E+LVG N+ + ++N+ I AS++ P D S+ +Q
Sbjct: 34 TPTSDVSFSYIFPDNQDKNFAAGSVVEVLVGFTNNADKALNITHIFASLNHPQDFSVFIQ 93
Query: 118 NLTGQAFNNATVPVSAQATFPIHFCCQ---QPGTFDLVGSIVYEVDQHPYQSTFYNGTIE 174
N T F A V AT F +P F L+ S+ Y+ + TF+N TI
Sbjct: 94 NYTRGDFGIA-VEKGHHATLAYRFVPSEYLEPREFGLLISLEYQDGAQNFTQTFFNSTIN 152
Query: 175 VVESGGFISIESVFLVTLGIALLVLFGLWIHG------QVKQLSKKTKKAPKVEVGTGTT 228
+ E ++S FL+ LG+ + G ++G +V+ +SK K A +VE T
Sbjct: 153 ITEKETSFDMDSFFLILLGLGFVGGIGYIVYGKMPKQKKVRTVSKVNKNAVRVE-----T 207
Query: 229 DASMDEWLQGTA 240
+ EWL GT+
Sbjct: 208 EDETAEWLSGTS 219
>gi|330804062|ref|XP_003290018.1| hypothetical protein DICPUDRAFT_80780 [Dictyostelium purpureum]
gi|325079867|gb|EGC33447.1| hypothetical protein DICPUDRAFT_80780 [Dictyostelium purpureum]
Length = 232
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 91/189 (48%), Gaps = 15/189 (7%)
Query: 61 PGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLT 120
P V IFP N + AAG E+LVG N + ++N+ I AS++ P D S+ +QN T
Sbjct: 38 PEVSFSYIFPDNQDKNFAAGSVAEVLVGFTNKADKALNITHIYASLNHPQDSSVYIQNYT 97
Query: 121 GQAFNNATVPVSAQATFPIHFCCQ---QPGTFDLVGSIVYEVDQHPYQSTFYNGTIEVVE 177
F A V AT F +P F L+ S+ Y+ Y TF+N TI + E
Sbjct: 98 RGDFGIA-VEKGHHATLAYRFVPSEYLEPRQFGLLISLEYQDGAQNYTLTFFNSTINITE 156
Query: 178 SGGFISIESVFLVTLGIALLVLFGLWIHG------QVKQLSKKTKKAPKVEVGTGTTDAS 231
++S FL+ LG A++ G +++ +V++ K+ KVE T+A
Sbjct: 157 KESSFDMDSFFLLILGFAVMGGVGYFVYSKMPKQKKVRRTVSKSSSVAKVE-----TEAD 211
Query: 232 MDEWLQGTA 240
+WL GT+
Sbjct: 212 TADWLSGTS 220
>gi|328866655|gb|EGG15038.1| translocon-associated protein TRAP alpha subunit [Dictyostelium
fasciculatum]
Length = 309
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 6/189 (3%)
Query: 57 LSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLV 116
++P + IFP + AG E+L+G N+GE NV AI AS++ + +
Sbjct: 31 VAPVSDISFSYIFPDYPTKEFPAGSVIEVLIGFTNNGEVDYNVSAIYASLNHAQETKHYI 90
Query: 117 QNLTGQAFNNATVPVSAQATFPIHFCCQQ---PGTFDLVGSIVYEVDQHPYQSTFYNGTI 173
QN T + P QAT P F + P F L+ S+ Y DQ + STF+N TI
Sbjct: 91 QNYTKAEYGVNVKP-GFQATLPYRFVPSEYLEPRQFALLVSVDYRADQQNFTSTFFNSTI 149
Query: 174 EVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKA--PKVEVGTGTTDAS 231
+VE IE FL+ G+ L+ L G ++G++ + K + + K++ G + S
Sbjct: 150 LIVEKPVSFDIEHFFLILFGLGLVALIGYIVYGKLPKAQKASTLSIINKIKTSAGVKETS 209
Query: 232 MDEWLQGTA 240
+ ++ +A
Sbjct: 210 QKKVVKSSA 218
>gi|156398202|ref|XP_001638078.1| predicted protein [Nematostella vectensis]
gi|156225195|gb|EDO46015.1| predicted protein [Nematostella vectensis]
Length = 291
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 95/185 (51%), Gaps = 8/185 (4%)
Query: 57 LSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLV 116
L P+P DTV +F KN+ + +AG ++ LV N+G + V ++AS+ P D+S +
Sbjct: 80 LKPSPDADTVILFTKNTEQQFSAGLVSKCLVSFSNNGRNDFMVDMMEASLRYPQDYSYYI 139
Query: 117 QNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYNGT 172
QN T +N P QA+F F + F L +++Y + D Y+ +N T
Sbjct: 140 QNFTAFQYNTVVKP-GHQASFEYAFRPHESFGGRPFGLSINLLYKDTDGKMYRDAVFNET 198
Query: 173 IEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASM 232
+++VES + E+ FL A+ +L + H + + K + KAP +E+GT D +
Sbjct: 199 VQLVESDEGMDGETFFLYLFIAAIALLLVMAAHYGLTSIKKSSSKAP-IEMGT-QQDGDI 256
Query: 233 D-EWL 236
D EWL
Sbjct: 257 DYEWL 261
>gi|440791788|gb|ELR13026.1| transloconassociated protein, putative [Acanthamoeba castellanii
str. Neff]
Length = 262
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 23/203 (11%)
Query: 58 SPAPGVDTVCIFPKNSARV--------------VAAGEETELLVGMKNDGESSVNVIAIQ 103
+ A V T +FP N+AR AGE E+LVG +N G N+ I
Sbjct: 42 TAAEDVVTSYVFPDNAARRNVLMWVSARFENLEFTAGEPVEVLVGFRNKGSRQYNITFID 101
Query: 104 ASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATFPIHFCCQ-----QPGTFDLVGSIVY- 157
AS + P D S +QN + + +PV A + + + +P F L+ ++ Y
Sbjct: 102 ASFNFPQDFSYYIQNFSRWEYG---MPVQATQEVTLSYMFRPDAMLEPRDFGLLVNVYYK 158
Query: 158 EVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKK 217
+ Y + +NGT+++VE +S F V +ALL + G + + + +KK K
Sbjct: 159 DATGRNYTNAAFNGTVDLVEPVVGWDAQSFFAVLAVLALLGVGGFFAYRSLSTWAKKQKS 218
Query: 218 APKVEVGTGTTDASMDEWLQGTA 240
+ KVE GT D+WL GTA
Sbjct: 219 SKKVEYGTKVRQEVEDDWLAGTA 241
>gi|443701550|gb|ELT99950.1| hypothetical protein CAPTEDRAFT_223723 [Capitella teleta]
Length = 298
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 97/209 (46%), Gaps = 20/209 (9%)
Query: 57 LSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLV 116
L P+P DT +F K +V AAGE ++LVG N GE V I A+ H P D+S +
Sbjct: 80 LKPSPDADTYLLFTKPVDQVFAAGELVKILVGFTNAGEKDFVVDTIDAAFHYPQDYSFYI 139
Query: 117 QNLTGQAFNNATVPVSAQATFPIHFCCQQPGT------FDLVGSIVY-EVDQHPYQSTFY 169
QN T + V QATF F QP F L ++ Y + D + +Q +
Sbjct: 140 QNFTAVGYQR-QVESGRQATFEYAF---QPSDSFSGRPFGLTINLNYRDQDGNMFQQAMF 195
Query: 170 NGTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKT---KKAPKVEVGT- 225
N TI +VE + E+ FL AL+VL + + KK KAP VE+GT
Sbjct: 196 NETITLVEPDEGLDGETFFLYIFLAALVVLMLVGAQHLLGSFGKKRMSKSKAP-VEMGTQ 254
Query: 226 GTTDASMD----EWLQGTAYTQSLSSKSK 250
+D D E L GT+ + S KSK
Sbjct: 255 SNSDIDYDWIPKEALNGTSRSPGRSPKSK 283
>gi|145346461|ref|XP_001417705.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577933|gb|ABO95998.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 249
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 61 PGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLT 120
P V++V FP ++ R GE ++L+G++N G +VNV + S+++P + + V N T
Sbjct: 37 PDVESVVAFPDHADRAFPGGERVKVLLGLRNTGNDAVNVTHLAGSLNVPNNFNFYVTNFT 96
Query: 121 GQAFNNATVPVSAQATFPIHFCC--QQPG-TFDLVGSIVYEVDQHPYQSTFYNGTIEVVE 177
+F +A + +ATF F Q G + L + Y+ Y +T++N T+ V++
Sbjct: 97 VSSFGDAVIKPKKEATFEYEFAIDPQFAGHSLQLALTAFYDEAGVAYATTYFNSTVPVLD 156
Query: 178 SGGFISIE--SVFLVTLGIALLVLFGLW----------IHGQVKQLSKKTKKA--PKVEV 223
E ++L G+A L G+ G+ K + TKK KVE
Sbjct: 157 PKVVFDRELAVIYLTLAGVAFLCFAGVMKAAGLGHLVPFIGEAKPTTGATKKTYVKKVE- 215
Query: 224 GTGTTDASM---DEWLQGTAYTQ 243
GTT AS ++WL+GTA+ +
Sbjct: 216 KKGTTSASASDSEQWLEGTAFAR 238
>gi|308512809|gb|ADO33058.1| signal sequence receptor [Biston betularia]
Length = 279
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 102/226 (45%), Gaps = 13/226 (5%)
Query: 23 VAKCQSDSETGVAETEGGDLGIVGEDAQ-DFGDGTLSPAPGVDTVCIFPK------NSAR 75
+A+ + D V + EG D +VGEDA D D T+ + VDT +F K + A
Sbjct: 24 LARAEEDELDDVVDIEGEDSQVVGEDALGDDDDSTVKSSQDVDTTILFTKPQTIYGDIAF 83
Query: 76 VVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQA 135
+ AG + LVG N G+ V +++AS P D++ +QN T FN P +A
Sbjct: 84 DLQAGYPVDFLVGFVNKGKEDYVVESMEASFRYPMDYTYYIQNFTALPFNREVKP-KQEA 142
Query: 136 TFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYNGTIEVVESGGFISIESVFL-V 190
TF F + F L + Y + + YQ YN T+ +VE + E+ FL V
Sbjct: 143 TFSYSFIPNEAFAGRPFGLNVQLNYRDASGNYYQEAVYNQTVNIVEVSEGLDGETFFLYV 202
Query: 191 TLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEWL 236
LG A ++ L +++ ++ + TGT + EWL
Sbjct: 203 FLGAACVLALVLGQQALSSLARRRSPRSAPKPLETGTANDVDYEWL 248
>gi|346468441|gb|AEO34065.1| hypothetical protein [Amblyomma maculatum]
Length = 288
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 93/201 (46%), Gaps = 8/201 (3%)
Query: 57 LSPAPGVDTVCIF--PKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
L P+P DT +F P+N + AG+E LVG N GE + + AS P D +
Sbjct: 70 LKPSPHGDTYLLFTKPQNFQSKLPAGKEVHFLVGFSNKGERDFVLDTMDASFRYPMDFTF 129
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQPGT---FDLVGSIVY-EVDQHPYQSTFYN 170
+QN T +N P QAT F + + F L ++ Y + D + +Q +N
Sbjct: 130 YIQNFTTIGYNKVVKP-KQQATLSYSFFTSESFSARPFGLAVNLRYRDADGNAFQDAVFN 188
Query: 171 GTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDA 230
TIEVVE + E+ FL LVL + + LSKK K A K +V GTT+A
Sbjct: 189 ETIEVVEIDEGLDGETFFLYMFLATCLVLLLVAAQQFLGTLSKK-KPASKQKVEMGTTNA 247
Query: 231 SMDEWLQGTAYTQSLSSKSKK 251
S ++ T+ L+ K+
Sbjct: 248 SDVDYDWLPKETRDLNRSPKR 268
>gi|427787731|gb|JAA59317.1| Putative translocon-associated protein [Rhipicephalus pulchellus]
Length = 285
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 88/190 (46%), Gaps = 14/190 (7%)
Query: 57 LSPAPGVDTVCIF--PKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
L P+P DT +F P+N + AG+E LVG N G+ + + AS P D S
Sbjct: 70 LKPSPHGDTYMLFTKPQNFQSKLPAGKEVHFLVGFSNKGDKEFVLDTMDASFRYPMDFSF 129
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQPGT---FDLVGSIVY-EVDQHPYQSTFYN 170
+QN T +N P QAT F + + F L ++ Y + D + YQ +N
Sbjct: 130 YIQNFTTIGYNKVVKP-KQQATLSYSFFASESFSARPFGLAVNLRYRDADGNAYQDAVFN 188
Query: 171 GTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAP----KVEVGTG 226
TIEVVE + E+ FL LVL + + GQ + L +KK P KVE+GT
Sbjct: 189 ETIEVVEIDEGLDGETFFLYMFLATCLVL--MLVAGQ-QFLGTLSKKKPASKQKVEMGTQ 245
Query: 227 TTDASMDEWL 236
+ +WL
Sbjct: 246 SASDVDYDWL 255
>gi|389611389|dbj|BAM19306.1| conserved hypothetical protein [Papilio polytes]
Length = 280
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 109/260 (41%), Gaps = 13/260 (5%)
Query: 6 FRVFFFALLLLASPLLQVAKCQSDSETGVAETEGGDLGIVGEDAQ-DFGDGTLSPAPGVD 64
F + ALL S +A + D V + EG D +VGEDA D D + + +D
Sbjct: 8 FLILPAALLCFQSANTILAHAEEDELDDVVDIEGEDSQVVGEDALGDDDDSVVKSSEDID 67
Query: 65 TVCIFPK------NSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQN 118
T +F K ++A + AG E LVG N G V ++AS P D++ +QN
Sbjct: 68 TTILFTKPIPNYGDNAFDLQAGYPVEFLVGFINKGNEDFLVETMEASFRYPLDYTYYIQN 127
Query: 119 LTGQAFNNATVPVSAQATFPIHFCCQQPGTFDLVGSIV----YEVDQHPYQSTFYNGTIE 174
T ++ P +ATF F + G + + + YQ YN T+
Sbjct: 128 FTALPYHREVKP-KEEATFAYSFIPSEAFAGRPCGLNIQLNYRDASGNYYQEAVYNQTVN 186
Query: 175 VVESGGFISIESVFL-VTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMD 233
+VE + E+ FL V LG A +++ L G +++ +A + TGT +
Sbjct: 187 IVEISEGLDGETFFLYVFLGAACVLILVLGQQGLSSLARRRSPRAAPKPLETGTANDVDY 246
Query: 234 EWLQGTAYTQSLSSKSKKKK 253
+WL Q S K+
Sbjct: 247 DWLPKEVVNQLKKSPKTPKQ 266
>gi|339256358|ref|XP_003370443.1| putative translocon-associated protein subunit alpha [Trichinella
spiralis]
gi|316965072|gb|EFV49905.1| putative translocon-associated protein subunit alpha [Trichinella
spiralis]
Length = 283
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 118/253 (46%), Gaps = 14/253 (5%)
Query: 13 LLLLASPLLQVAKCQSDSETGVAETEGGDLGIVGEDAQDFGDGT----LSPAPGVDTVCI 68
LLL++ P+ V D + + E E L G+ D D L+P+P ++ +
Sbjct: 13 LLLISIPVRNVLSADEDDDDALVEEESDKLKAGGKSLGDSDDEEVLEGLAPSPDIEAAML 72
Query: 69 F--PKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNN 126
F P NS + + +G+ +L+ N G V +IQA + P D+S V N + ++++
Sbjct: 73 FTEPPNS-KELPSGKPAHMLISFFNGGIDEYFVDSIQAFLKYPTDYSYNVHNYSVRSYHQ 131
Query: 127 ATVPVSAQATFP---IHFCCQQPGTFDLVGSIVYEV-DQHPYQSTFYNGTIEVVESGGFI 182
A P +A+F + F F LV + Y++ D ++ST +N T+ +VE
Sbjct: 132 AVYP-DTEASFEYSMMAFDSLAGRPFGLVVLVDYKLADGREFRSTVFNETVHIVEEESAF 190
Query: 183 SIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDA-SMD-EWLQGTA 240
+ E +FLV + + + L + + + S+K VEV GTT+A +D +W+
Sbjct: 191 NPEMIFLVMVFVIIGCLVAAFAYQFISGKSRKHVVKKHVEVEMGTTNAGDVDLDWIPKQI 250
Query: 241 YTQSLSSKSKKKK 253
S S+ +K
Sbjct: 251 LAMSERSRQPTQK 263
>gi|327281791|ref|XP_003225630.1| PREDICTED: translocon-associated protein subunit alpha-like [Anolis
carolinensis]
Length = 296
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 96/215 (44%), Gaps = 14/215 (6%)
Query: 44 IVGEDAQDFGDGTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQ 103
+V E ++ G +P DT +F K A + LVG N G + ++
Sbjct: 69 LVQEKEEEDLSGEPKASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIIESLD 126
Query: 104 ASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVYEVD 160
AS P D+ +QN T N VP QATF F +P F LV ++ Y+ D
Sbjct: 127 ASFRYPQDYQFFIQNFTALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYK-D 184
Query: 161 Q--HPYQSTFYNGTIEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTK 216
Q + +Q +N T+ ++E + E++F+ G+ LLV+ GL Q+ + K+ +
Sbjct: 185 QSGNFFQDAVFNQTVTIIEKEDGLDGETIFMYVFLAGLGLLVIVGLH---QLLESRKRKR 241
Query: 217 KAPKVEVGTGTTDASMDEWLQGTAYTQSLSSKSKK 251
A KVE+GT + W+ Q + S+ K
Sbjct: 242 PAQKVEMGTSNQNDVDMSWIPQETLNQIMQSRRDK 276
>gi|339247913|ref|XP_003375590.1| putative translocon-associated protein subunit alpha [Trichinella
spiralis]
gi|316970997|gb|EFV54840.1| putative translocon-associated protein subunit alpha [Trichinella
spiralis]
Length = 298
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 118/253 (46%), Gaps = 14/253 (5%)
Query: 13 LLLLASPLLQVAKCQSDSETGVAETEGGDLGIVGEDAQDFGDGT----LSPAPGVDTVCI 68
LLL++ P+ V D + + E E L G+ D D L+P+P ++ +
Sbjct: 28 LLLISIPVRNVLSADEDDDDALVEEESDKLKAGGKSLGDSDDEEVLEGLAPSPDIEAAML 87
Query: 69 F--PKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNN 126
F P NS + + +G+ +L+ N G V +IQA + P D+S V N + ++++
Sbjct: 88 FTEPPNS-KELPSGKPAHMLISFFNGGIDEYFVDSIQAFLKYPTDYSYNVHNYSVRSYHQ 146
Query: 127 ATVPVSAQATFP---IHFCCQQPGTFDLVGSIVYEV-DQHPYQSTFYNGTIEVVESGGFI 182
A P +A+F + F F LV + Y++ D ++ST +N T+ +VE
Sbjct: 147 AVYP-DTEASFEYSMMAFDSLAGRPFGLVVLVDYKLADGREFRSTVFNETVHIVEEESAF 205
Query: 183 SIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDA-SMD-EWLQGTA 240
+ E +FLV + + + L + + + S+K VEV GTT+A +D +W+
Sbjct: 206 NPEMIFLVMVFVIIGCLVAAFAYQFISGKSRKHVVKKHVEVEMGTTNAGDVDLDWIPKQI 265
Query: 241 YTQSLSSKSKKKK 253
S S+ +K
Sbjct: 266 LAMSERSRQPTQK 278
>gi|148234257|ref|NP_001079921.1| signal sequence receptor, alpha (translocon-associated protein
alpha) precursor [Xenopus laevis]
gi|34783867|gb|AAH56853.1| MGC64448 protein [Xenopus laevis]
Length = 286
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 101/222 (45%), Gaps = 15/222 (6%)
Query: 41 DLGIVGEDAQDFGDGTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVI 100
DL E+ +D G +P DT +F K A + + LVG N G + V
Sbjct: 61 DLTEEKEEEEDLSSGEPKASPNADTTILFVKGED--FPANDIVKFLVGFTNKGPENFIVE 118
Query: 101 AIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY 157
++ AS P D+ +QN T N VP QATF F +P F LV ++ Y
Sbjct: 119 SLDASFRYPQDYQFYIQNFTALPL-NTVVPPQKQATFEYSFIPAEPMGGRPFGLVINLNY 177
Query: 158 -EVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKK 214
+ + + +Q +N T+ ++E + E++F+ G+ LLV+ GL Q+ + K+
Sbjct: 178 KDANGNAFQDAVFNQTVTIIEKEDGLDGETIFMYMFLGGLGLLVIVGLH---QLLESRKR 234
Query: 215 TKKAPKVEVGTGTTDASMDEWLQGTAYTQ---SLSSKSKKKK 253
+ A KVE+GT + W+ +Q + +S +K+
Sbjct: 235 KRPAQKVEMGTSNQNDVDMSWIPPETLSQINKASPRRSPRKR 276
>gi|340377658|ref|XP_003387346.1| PREDICTED: translocon-associated protein subunit alpha-like
[Amphimedon queenslandica]
Length = 312
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 18/206 (8%)
Query: 59 PAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQN 118
P+P T IF + AG+ + L+G N+G + V +++AS P D S +QN
Sbjct: 91 PSPDAKTDIIFTNRAENNFLAGQIVKSLIGFSNNGNENFIVTSVEASFRYPQDFSYFIQN 150
Query: 119 LTGQAFNNATVPVSAQATFPIHFCCQQ---PGTFDLVGSIVYEVDQ-HPYQSTFYNGTIE 174
+ + + +A VP S QA+F F + F LV ++ Y+ ++ + ++ +NGT+
Sbjct: 151 FS-KVYYDAYVPPSHQASFTYDFTPSESFYSRPFGLVVNVYYKTEEGNEFRDAVFNGTVN 209
Query: 175 VVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPK-----VEVGTGTTD 229
+VE ES F+ L I+ + L IH + + + APK VE GT
Sbjct: 210 IVEIEEEFDAESFFMYVLMISGVCLLMFIIHFVWTTVKRGGRAAPKKRAAPVERGTTKNK 269
Query: 230 AS-MDE-WL-QGTAYTQSLSSKSKKK 252
S +DE WL +GT + KS +K
Sbjct: 270 RSQVDESWLPEGT-----IQKKSPRK 290
>gi|389608571|dbj|BAM17895.1| conserved hypothetical protein [Papilio xuthus]
Length = 280
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 108/260 (41%), Gaps = 13/260 (5%)
Query: 6 FRVFFFALLLLASPLLQVAKCQSDSETGVAETEGGDLGIVGEDAQ-DFGDGTLSPAPGVD 64
F + ALL S +A + D V + EG D +VGEDA D D + + +D
Sbjct: 8 FLILPAALLCFQSANTILAHAEEDELDDVVDIEGEDSQVVGEDALGDDDDSVVKSSQDID 67
Query: 65 TVCIFPK------NSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQN 118
T +F K ++A + AG E LVG N G V ++AS P D++ +QN
Sbjct: 68 TTILFTKPIPNYGDNAFDLQAGYPVEFLVGFINKGSEDYVVETMEASFRYPLDYTYYIQN 127
Query: 119 LTGQAFNNATVPVSAQATFPIHFCCQQPGTFDLVGSIV----YEVDQHPYQSTFYNGTIE 174
T ++ P +ATF F + G + + + YQ YN T+
Sbjct: 128 FTALPYHREVKP-KEEATFAYSFIPNEAFAGRPCGLNIQLNYRDASGNYYQEAVYNQTVN 186
Query: 175 VVESGGFISIESVFL-VTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMD 233
+VE + E+ FL V LG A +++ L +++ +A + TGT +
Sbjct: 187 IVEISEGLDGETFFLYVFLGAACVLILVLGQQALSSLARRRSPRAAPKPLETGTANDVDY 246
Query: 234 EWLQGTAYTQSLSSKSKKKK 253
+WL Q S K+
Sbjct: 247 DWLPKEVVNQLKKSPKTPKQ 266
>gi|318086998|gb|ADV40091.1| signal sequence receptor [Latrodectus hesperus]
Length = 299
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 95/225 (42%), Gaps = 15/225 (6%)
Query: 23 VAKCQSDSETGVA---ETEGGDLGIVGEDAQDFGDGTLSPAPGVDTVCIF--PKNSARVV 77
V Q +SE V T D +V +D D G+ L PAP DT +F P +
Sbjct: 40 VEDLQPESEAAVVGKMTTPSMD-SLVEDD--DLGESPLKPAPDADTTFLFTQPAGIVSEL 96
Query: 78 AAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATF 137
AG++ LVG N G V ++ AS P D + +QN T +N P +
Sbjct: 97 PAGKDVHFLVGFSNKGSKDFIVDSMDASFRYPMDFTFYIQNFTAIPYNRVVKPKQDITLY 156
Query: 138 PIHFCCQQPGT--FDLVGSIVYE-VDQHPYQSTFYNGTIEVVESGGFISIESVFLVTLGI 194
+ + + F LV ++ Y D H Y +N TI +VE + E+ FL L
Sbjct: 157 YAFYTSETYSSRPFGLVVNLYYRGADGHQYLDAVFNETITIVEIEDSLDGETFFLYVLLA 216
Query: 195 ALLVLFGLWIHGQ--VKQLSKKTKKAPKVEVGTGTTDASMD-EWL 236
A +VL L + Q V KK K+E GT +D +WL
Sbjct: 217 ACIVLI-LVVTQQFIVNFTKKKISSGQKIETGTQNHQNDVDYDWL 260
>gi|197098592|ref|NP_001126878.1| translocon-associated protein subunit alpha precursor [Pongo
abelii]
gi|71162389|sp|Q5R4X4.1|SSRA_PONAB RecName: Full=Translocon-associated protein subunit alpha;
Short=TRAP-alpha; AltName: Full=Signal sequence receptor
subunit alpha; Short=SSR-alpha; Flags: Precursor
gi|55733012|emb|CAH93192.1| hypothetical protein [Pongo abelii]
Length = 291
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 12/203 (5%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G +P DT +F K A + LVG N G V ++ AS P D+
Sbjct: 75 GEPEASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQF 132
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYN 170
+QN T N VP QATF F +P F LV ++ Y +++ + +Q +N
Sbjct: 133 YIQNFTALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFN 191
Query: 171 GTIEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTT 228
T+ V+E + E++F+ G+ LLV+ GL Q+ + K+ + KVE+GT +
Sbjct: 192 QTVTVIEREDGLDGETIFMYMFLAGLGLLVIVGLH---QLLESRKRKRPVQKVEMGTSSQ 248
Query: 229 DASMDEWLQGTAYTQSLSSKSKK 251
+ W+ Q + S+ K
Sbjct: 249 NDVDMSWIPQETLNQIMQSRRDK 271
>gi|397496814|ref|XP_003819222.1| PREDICTED: translocon-associated protein subunit alpha isoform 2
[Pan paniscus]
Length = 291
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 12/203 (5%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G +P DT +F K A + LVG N G V ++ AS P D+
Sbjct: 75 GEPEASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQF 132
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYN 170
+QN T N VP QATF F +P F LV ++ Y +++ + +Q +N
Sbjct: 133 YIQNFTALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFN 191
Query: 171 GTIEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTT 228
T+ V+E + E++F+ G+ LLV+ GL Q+ + K+ + KVE+GT +
Sbjct: 192 QTVTVIEREDGLDGETIFMYMFLAGLGLLVIVGLH---QLLESRKRKRPIQKVEMGTSSQ 248
Query: 229 DASMDEWLQGTAYTQSLSSKSKK 251
+ W+ Q + S+ K
Sbjct: 249 NDVDMSWIPQETLNQIMQSRRDK 271
>gi|390461271|ref|XP_003732643.1| PREDICTED: translocon-associated protein subunit alpha isoform 2
[Callithrix jacchus]
Length = 291
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 12/203 (5%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G +P DT +F K A + LVG N G V ++ AS P D+
Sbjct: 75 GEPEASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQF 132
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYN 170
+QN T N VP QATF F +P F LV ++ Y +++ + +Q +N
Sbjct: 133 YIQNFTALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFN 191
Query: 171 GTIEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTT 228
T+ V+E + E++F+ G+ LLV+ GL Q+ + K+ + KVE+GT +
Sbjct: 192 QTVTVIEREDGLDGETIFMYMFLAGLGLLVIVGLH---QLLESRKRKRPIQKVEMGTSSQ 248
Query: 229 DASMDEWLQGTAYTQSLSSKSKK 251
+ W+ Q + S+ K
Sbjct: 249 NDVDMSWIPQETLNQIMQSRRDK 271
>gi|403270965|ref|XP_003927421.1| PREDICTED: translocon-associated protein subunit alpha isoform 2
[Saimiri boliviensis boliviensis]
Length = 291
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 12/203 (5%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G +P DT +F K A + LVG N G V ++ AS P D+
Sbjct: 75 GEPEASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQF 132
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYN 170
+QN T N VP QATF F +P F LV ++ Y +++ + +Q +N
Sbjct: 133 YIQNFTALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFN 191
Query: 171 GTIEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTT 228
T+ V+E + E++F+ G+ LLV+ GL Q+ + K+ + KVE+GT +
Sbjct: 192 QTVTVIEREDGLDGETIFMYMFLAGLGLLVIVGLH---QLLESRKRKRPIQKVEMGTSSQ 248
Query: 229 DASMDEWLQGTAYTQSLSSKSKK 251
+ W+ Q + S+ K
Sbjct: 249 NDVDMSWIPQETLNQIMQSRRDK 271
>gi|402865736|ref|XP_003897067.1| PREDICTED: translocon-associated protein subunit alpha isoform 2
[Papio anubis]
gi|67971172|dbj|BAE01928.1| unnamed protein product [Macaca fascicularis]
gi|90074996|dbj|BAE87178.1| unnamed protein product [Macaca fascicularis]
Length = 291
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 12/203 (5%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G +P DT +F K A + LVG N G V ++ AS P D+
Sbjct: 75 GEPEASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQF 132
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYN 170
+QN T N VP QATF F +P F LV ++ Y +++ + +Q +N
Sbjct: 133 YIQNFTALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFN 191
Query: 171 GTIEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTT 228
T+ V+E + E++F+ G+ LLV+ GL Q+ + K+ + KVE+GT +
Sbjct: 192 QTVTVIEREDGLDGETIFMYMFLAGLGLLVIVGLH---QLLESRKRKRPIQKVEMGTSSQ 248
Query: 229 DASMDEWLQGTAYTQSLSSKSKK 251
+ W+ Q + S+ K
Sbjct: 249 NDVDMSWIPQETLNQIMQSRRDK 271
>gi|441621783|ref|XP_004088775.1| PREDICTED: translocon-associated protein subunit alpha [Nomascus
leucogenys]
Length = 291
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 12/203 (5%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G +P DT +F K A + LVG N G V ++ AS P D+
Sbjct: 75 GEPEASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQF 132
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYN 170
+QN T N VP QATF F +P F LV ++ Y +++ + +Q +N
Sbjct: 133 YIQNFTALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFN 191
Query: 171 GTIEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTT 228
T+ V+E + E++F+ G+ LLV+ GL Q+ + K+ + KVE+GT +
Sbjct: 192 QTVTVIEREDGLDGETIFMYMFLAGLGLLVIVGLH---QLLESRKRKRPIQKVEMGTSSQ 248
Query: 229 DASMDEWLQGTAYTQSLSSKSKK 251
+ W+ Q + S+ K
Sbjct: 249 NDVDMSWIPQETLNQIMQSRRDK 271
>gi|426351529|ref|XP_004043291.1| PREDICTED: translocon-associated protein subunit alpha isoform 2
[Gorilla gorilla gorilla]
Length = 291
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 12/203 (5%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G +P DT +F K A + LVG N G V ++ AS P D+
Sbjct: 75 GEPEASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQF 132
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYN 170
+QN T N VP QATF F +P F LV ++ Y +++ + +Q +N
Sbjct: 133 YIQNFTALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFN 191
Query: 171 GTIEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTT 228
T+ V+E + E++F+ G+ LLV+ GL Q+ + K+ + KVE+GT +
Sbjct: 192 QTVTVIEREDGLDGETIFMYMFLAGLGLLVIVGLH---QLLESRKRKRPIQKVEMGTSSQ 248
Query: 229 DASMDEWLQGTAYTQSLSSKSKK 251
+ W+ Q + S+ K
Sbjct: 249 NDVDMSWIPQETLNQIMQSRRDK 271
>gi|395830445|ref|XP_003788337.1| PREDICTED: translocon-associated protein subunit alpha isoform 2
[Otolemur garnettii]
Length = 291
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 12/203 (5%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G +P DT +F K A + LVG N G V ++ AS P D+
Sbjct: 75 GEPEASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQF 132
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYN 170
+QN T N VP QATF F +P F LV ++ Y +++ + +Q +N
Sbjct: 133 YIQNFTALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFN 191
Query: 171 GTIEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTT 228
T+ V+E + E++F+ G+ LLV+ GL Q+ + K+ + KVE+GT +
Sbjct: 192 QTVTVIEREDGLDGETIFMYMFLAGLGLLVVIGLH---QLLESRKRKRPIQKVEMGTSSQ 248
Query: 229 DASMDEWLQGTAYTQSLSSKSKK 251
+ W+ Q + S+ K
Sbjct: 249 NDVDMSWIPQETLNQIMQSRRDK 271
>gi|326917035|ref|XP_003204810.1| PREDICTED: translocon-associated protein subunit alpha-like
[Meleagris gallopavo]
Length = 276
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 12/203 (5%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G +P DT +F K A + LVG N G V ++ AS P D+
Sbjct: 60 GEPKASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQF 117
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYN 170
+QN T N VP QATF F +P F LV ++ Y + + + +Q +N
Sbjct: 118 YIQNFTALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYRDANGNMFQDAVFN 176
Query: 171 GTIEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTT 228
T+ ++E + E++F+ G+ LLV+ GL Q+ + K+ + KVE+GT
Sbjct: 177 QTVTIIEKEDGLDGETIFMYMFLAGLGLLVIVGLH---QLLESRKRKRPVQKVEMGTSNQ 233
Query: 229 DASMDEWLQGTAYTQSLSSKSKK 251
+ W+ Q + S+ K
Sbjct: 234 NDVDMSWIPQETLNQIMQSRRDK 256
>gi|428170532|gb|EKX39456.1| hypothetical protein GUITHDRAFT_76400 [Guillardia theta CCMP2712]
Length = 203
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 84/179 (46%), Gaps = 7/179 (3%)
Query: 65 TVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAF 124
T +FP + G+ + L G N G+ S N+ ++ + P+D+S+ +QN + +
Sbjct: 12 TTILFPDFQDKKFVQGQFVDALCGFSNLGDKSFNITNLKGYLISPYDYSMYIQNFS-EVP 70
Query: 125 NNATVPVSAQATFPIHFC---CQQPGTFDLVGSIVY-EVDQHPYQSTFYNGTIEVVESGG 180
V + T F +P + L ++ Y + D+ YQ+ F+N TIE+VES
Sbjct: 71 AYTEVKKGEEGTLMYRFLPDPALEPREYMLTLTVDYIDADKEEYQTAFFNSTIEIVESQS 130
Query: 181 FISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEWLQGT 239
+ +F L + L + GL + + K +K V+ + ++S +EWLQGT
Sbjct: 131 ALDSRVLFGRFLTVCFLGILGLVGNAAYSRFMPKRRKT--VDTSARSKESSQNEWLQGT 187
>gi|449492367|ref|XP_004175573.1| PREDICTED: translocon-associated protein subunit alpha isoform 2
[Taeniopygia guttata]
Length = 293
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 12/203 (5%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G +P DT +F K A + LVG N G V ++ AS P D+
Sbjct: 77 GEPKASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQF 134
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYN 170
+QN T + N VP QATF F +P F LV ++ Y + + +Q +N
Sbjct: 135 YIQNFTALSL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYRDASGNIFQDAVFN 193
Query: 171 GTIEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTT 228
T+ ++E + E++F+ G+ LLV+ GL Q+ + K+ + KVE+GT
Sbjct: 194 QTVTIIEKEDGLDGETIFMYMFLAGLGLLVIVGLH---QLLESRKRKRPVQKVEMGTSNQ 250
Query: 229 DASMDEWLQGTAYTQSLSSKSKK 251
+ W+ Q + S+ K
Sbjct: 251 NDVDMSWIPQETLNQIMQSRRDK 273
>gi|410920469|ref|XP_003973706.1| PREDICTED: translocon-associated protein subunit alpha-like
[Takifugu rubripes]
Length = 283
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 87/186 (46%), Gaps = 12/186 (6%)
Query: 47 EDAQDFGDGTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASV 106
ED + D LS P DT IF + A E + LVG N G V +++AS
Sbjct: 65 EDMDETDDKPLSSHPDADTAIIF--VTGEEFPANEIVKFLVGFTNKGSQEFTVKSLEASF 122
Query: 107 HLPFDHSLLVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQH 162
P + + +QN T + A P AQA+F F QP F LV + Y + +
Sbjct: 123 RYPQEFQVYIQNFTALPLDTAVQP-KAQASFEYSFIPAQPLAGRPFGLVILLNYLDAEGG 181
Query: 163 PYQSTFYNGTIEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAPK 220
+Q+ YN T+ + E + E++F+ G+ +L+LFG++ QV + + + K
Sbjct: 182 VFQNAVYNQTVTITEPDEGLDGETMFMYIFLGGLVVLMLFGMY---QVLETRTRKRIPLK 238
Query: 221 VEVGTG 226
VE GTG
Sbjct: 239 VEKGTG 244
>gi|551638|emb|CAA78290.1| SSR alpha subunit [Homo sapiens]
Length = 286
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 12/203 (5%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G +P DT +F K A + LVG N G V ++ AS P DH
Sbjct: 75 GEPEASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDHQF 132
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYN 170
+QN T N VP QATF F +P F LV ++ Y +++ + +Q +N
Sbjct: 133 YIQNFTALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFN 191
Query: 171 GTIEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTT 228
T+ V+E + E++F+ G+ LLV+ GL Q+ + K+ + KVE+GT +
Sbjct: 192 QTVTVIEREDGLDGETIFMYMFLAGLGLLVIVGLH---QLLESRKRKRPIQKVEMGTSSQ 248
Query: 229 DASMDEWLQGTAYTQSLSSKSKK 251
+ W+ Q + ++
Sbjct: 249 NDVDMSWIPQETLNQINKASPRR 271
>gi|387018812|gb|AFJ51524.1| Signal sequence receptor, alpha (SSR1) [Crotalus adamanteus]
gi|387019409|gb|AFJ51822.1| Translocon-associated protein subunit alpha-like [Crotalus
adamanteus]
Length = 291
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 89/197 (45%), Gaps = 14/197 (7%)
Query: 47 EDAQDFGDGTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASV 106
E +D G +P DT +F K A + LVG N G V ++ AS
Sbjct: 72 EKEEDDLSGEPKASPNADTTILFVKGED--FPANNIVKFLVGFTNKGTDDFIVESLDASF 129
Query: 107 HLPFDHSLLVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVYEVDQHP 163
P D+ +QN T N VP QATF F +P F LV ++ Y+ DQ+
Sbjct: 130 RYPQDYQFFIQNFTALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYK-DQNG 187
Query: 164 --YQSTFYNGTIEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAP 219
+Q +N T+ ++E + E++F+ G+ LLV+ GL Q+ + K+ + A
Sbjct: 188 NFFQDAVFNQTVTIIEKEDGLDGETIFMYMFLAGLGLLVIVGLH---QLLESRKRKRPAQ 244
Query: 220 KVEVGTGTTDASMDEWL 236
KVE+GT + W+
Sbjct: 245 KVEMGTSNQNDVDMSWI 261
>gi|149636456|ref|XP_001508821.1| PREDICTED: translocon-associated protein subunit alpha-like,
partial [Ornithorhynchus anatinus]
Length = 297
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 12/203 (5%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G +P DT +F K A + LVG N G V ++ AS P D+
Sbjct: 86 GEPKASPNADTTILFVKGED--FPANNIVKFLVGFTNKGSEDFVVESLDASFRYPQDYQF 143
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYN 170
+QN T N VP QATF F +P F LV ++ Y +V+ + +Q +N
Sbjct: 144 FIQNFTALPL-NTVVPPQKQATFEYSFIPAEPMGGRPFGLVINLNYKDVNGNVFQDAVFN 202
Query: 171 GTIEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTT 228
T+ +VE + E++F+ G+ LLV+ GL Q+ + K+ + KVE+GT
Sbjct: 203 QTVTIVEKEDGLDGETIFMYMFLAGLGLLVIVGLH---QLLESRKRKRPVQKVEMGTSNQ 259
Query: 229 DASMDEWLQGTAYTQSLSSKSKK 251
+ W+ Q + ++
Sbjct: 260 NDVDMSWIPQETLNQINKASPRR 282
>gi|158256532|dbj|BAF84239.1| unnamed protein product [Homo sapiens]
Length = 286
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 93/212 (43%), Gaps = 19/212 (8%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G +P DT +F K A + LVG N G V ++ AS P D+
Sbjct: 75 GEPEASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQF 132
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYN 170
+QN T N VP QATF F +P F LV ++ Y +++ + +Q YN
Sbjct: 133 YIQNFTALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVYN 191
Query: 171 GTIEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTT 228
T+ V+E + E++F+ G+ LLV+ GL Q+ + K+ + KVE+GT +
Sbjct: 192 QTVTVIEREDGLDGETIFMYMFLAGLGLLVIVGLH---QLLESRKRKRPIQKVEMGTSSQ 248
Query: 229 DASMDEWLQ-------GTAYTQSLSSKSKKKK 253
+ W+ A + L K +K+
Sbjct: 249 NDVDMSWIPQETLNRINKASPRRLPRKRAQKR 280
>gi|355561300|gb|EHH17932.1| hypothetical protein EGK_14445 [Macaca mulatta]
gi|355748210|gb|EHH52693.1| hypothetical protein EGM_13191 [Macaca fascicularis]
Length = 298
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 89/198 (44%), Gaps = 12/198 (6%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G +P DT +F K A + LVG N G V ++ AS P D+
Sbjct: 75 GEPEASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQF 132
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYN 170
+QN T N VP QATF F +P F LV ++ Y +++ + +Q +N
Sbjct: 133 YIQNFTALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFN 191
Query: 171 GTIEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTT 228
T+ V+E + E++F+ G+ LLV+ GL Q+ + K+ + KVE+GT +
Sbjct: 192 QTVTVIEREDGLDGETIFMYMFLAGLGLLVIVGLH---QLLESRKRKRPIQKVEMGTSSQ 248
Query: 229 DASMDEWLQGTAYTQSLS 246
+ W+ Q +S
Sbjct: 249 NDVDMSWIPQETLNQIIS 266
>gi|405976865|gb|EKC41344.1| Translocon-associated protein subunit alpha [Crassostrea gigas]
Length = 281
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 92/201 (45%), Gaps = 14/201 (6%)
Query: 57 LSPAPGVDTVCIFPKNSARV-VAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLL 115
L P+P D V +F K + AG LVG N GE + V +++ S P D++
Sbjct: 59 LKPSPDADAVMLFTKPIGTTDLPAGHTIRFLVGFTNKGEKTFTVQSLECSFRYPQDYNFF 118
Query: 116 VQNLTGQAFNNATVPVSAQATFPIHFCCQQ---PGTFDLVGSIVYEVDQ-HPYQSTFYNG 171
+QN T +N V QATF F + F L + Y+ ++ + + S +N
Sbjct: 119 IQNYTTAQYNQ-DVGSRKQATFEYGFTPNEGFAGRPFGLSILLNYKDEEGNSFMSPVFNE 177
Query: 172 TIEVVESG-GFISIESVFLVTL--GIALLVLFG---LWIHGQVKQLSKKTKKAPKVEVGT 225
T+ +VE G I E+ FL IA+L++ G L K SKK+ + P VE+GT
Sbjct: 178 TVNIVEPDEGLIDGETFFLYVFLAAIAVLLMVGAQQLLASFSKKHRSKKSHRQP-VEMGT 236
Query: 226 GTTDASMDEWLQGTAYTQSLS 246
TD D W+ + L+
Sbjct: 237 QNTDVDYD-WIPKETLERDLN 256
>gi|16605543|emb|CAC86147.1| translocon associated protein alpha homolog [Tetraodon
nigroviridis]
Length = 291
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 12/203 (5%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G + +P DT +F K A + L+G N G + V ++ AS P D+
Sbjct: 80 GEVKASPHADTTILFVKGED--FPANNIVKFLLGFTNKGSENFVVESLDASFRYPQDYQF 137
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVYEVDQ-HPYQSTFYN 170
+QN T VP + QATF F +P F LV ++ Y+ + +Q +N
Sbjct: 138 YIQNFTALQL-GTVVPPTRQATFEYSFIPAEPMGGRPFGLVINLNYKDSAGNVFQDAVFN 196
Query: 171 GTIEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTT 228
T+ V E + E++F+ G+ LLV+ GL Q+ + K+ + APKVE+GT +
Sbjct: 197 QTVTVTEKEDGLDGETIFMYVFLSGLGLLVIIGLH---QLLESRKRRRPAPKVEMGTSSH 253
Query: 229 DASMDEWLQGTAYTQSLSSKSKK 251
+ W+ Q + K+
Sbjct: 254 NGVDLSWIPQETLNQINKASPKR 276
>gi|432926501|ref|XP_004080860.1| PREDICTED: translocon-associated protein subunit alpha-like isoform
2 [Oryzias latipes]
Length = 297
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 89/203 (43%), Gaps = 12/203 (5%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G + +P DT +F K A + L+G N G + V ++ AS P D+
Sbjct: 81 GEVKASPNADTTILFVKGED--FPANNIVKFLLGFTNKGPENFVVDSLDASFRYPQDYQF 138
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVYEVDQ-HPYQSTFYN 170
+QN T VP QATF F +P F LV ++ Y+ + +Q +N
Sbjct: 139 YIQNFTALQL-GTVVPPGRQATFEYSFIPAEPMGGRPFGLVINLNYKDSSGNIFQDAVFN 197
Query: 171 GTIEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTT 228
T+ + E + E++F+ G+ LLV+ GL Q+ + K+ + A KVE GT +
Sbjct: 198 QTVTITEREDGLDGETIFMYVFLSGLGLLVIVGLH---QLLESRKRRRPAQKVETGTSSH 254
Query: 229 DASMDEWLQGTAYTQSLSSKSKK 251
+ W+ Q + S+ K
Sbjct: 255 NDVDMSWIPAETLNQIMQSRRDK 277
>gi|410927763|ref|XP_003977310.1| PREDICTED: translocon-associated protein subunit alpha-like
[Takifugu rubripes]
Length = 293
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 12/203 (5%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G + +P DT +F K A + L+G N G V ++ AS P D
Sbjct: 82 GEVKASPNADTTILFVKGED--FPANNIVKFLLGFTNKGSEDFVVESLDASFRYPQDFQF 139
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVYEVDQ-HPYQSTFYN 170
+QN T VP + QATF F +P F LV ++ Y+ + + +Q +N
Sbjct: 140 YIQNFTALQL-GTIVPPARQATFEYSFIPAEPMGGRPFGLVINLNYKDNSGNIFQDAVFN 198
Query: 171 GTIEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTT 228
T+ + E + E++F+ G+ LLV+ GL Q+ + K+ + APKVE+GT +
Sbjct: 199 QTVTITEREDGLDGETIFMYVFLSGLGLLVIIGLH---QLLESRKRRRPAPKVEMGTSSH 255
Query: 229 DASMDEWLQGTAYTQSLSSKSKK 251
+ W+ Q + K+
Sbjct: 256 NGVDLSWIPQETLNQINKASPKR 278
>gi|30585293|gb|AAP36919.1| Homo sapiens signal sequence receptor, alpha (translocon-associated
protein alpha) [synthetic construct]
gi|60653155|gb|AAX29272.1| signal sequence receptor alpha [synthetic construct]
gi|60653157|gb|AAX29273.1| signal sequence receptor alpha [synthetic construct]
Length = 287
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 12/203 (5%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G +P DT +F K A + LVG N G V ++ AS P D+
Sbjct: 75 GEPEASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQF 132
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYN 170
+QN T N VP QATF F +P F LV ++ Y +++ + +Q +N
Sbjct: 133 YIQNFTALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFN 191
Query: 171 GTIEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTT 228
T+ V+E + E++F+ G+ LLV+ GL Q+ + K+ + KVE+GT +
Sbjct: 192 QTVTVIEREDGLDGETIFMYMFLAGLGLLVIVGLH---QLLESRKRKRPIQKVEMGTSSQ 248
Query: 229 DASMDEWLQGTAYTQSLSSKSKK 251
+ W+ Q + ++
Sbjct: 249 NDVDMSWIPQETLNQINKASPRR 271
>gi|397496812|ref|XP_003819221.1| PREDICTED: translocon-associated protein subunit alpha isoform 1
[Pan paniscus]
Length = 286
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 12/203 (5%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G +P DT +F K A + LVG N G V ++ AS P D+
Sbjct: 75 GEPEASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQF 132
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYN 170
+QN T N VP QATF F +P F LV ++ Y +++ + +Q +N
Sbjct: 133 YIQNFTALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFN 191
Query: 171 GTIEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTT 228
T+ V+E + E++F+ G+ LLV+ GL Q+ + K+ + KVE+GT +
Sbjct: 192 QTVTVIEREDGLDGETIFMYMFLAGLGLLVIVGLH---QLLESRKRKRPIQKVEMGTSSQ 248
Query: 229 DASMDEWLQGTAYTQSLSSKSKK 251
+ W+ Q + ++
Sbjct: 249 NDVDMSWIPQETLNQINKASPRR 271
>gi|48146039|emb|CAG33242.1| SSR1 [Homo sapiens]
Length = 286
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 12/203 (5%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G +P DT +F K A + LVG N G V ++ AS P D+
Sbjct: 75 GEPEASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQF 132
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYN 170
+QN T N VP QATF F +P F LV ++ Y +++ + +Q +N
Sbjct: 133 YIQNFTALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFN 191
Query: 171 GTIEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTT 228
T+ V+E + E++F+ G+ LLV+ GL Q+ + K+ + KVE+GT +
Sbjct: 192 QTVTVIEREDGLDGETIFMYMFLAGLGLLVIVGLH---QLLESRKRKRPIQKVEMGTSSQ 248
Query: 229 DASMDEWLQGTAYTQSLSSKSKK 251
+ W+ Q + ++
Sbjct: 249 NDVDMSWIPQETLNQINKASPRR 271
>gi|119575606|gb|EAW55202.1| signal sequence receptor, alpha (translocon-associated protein
alpha), isoform CRA_a [Homo sapiens]
Length = 286
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 12/203 (5%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G +P DT +F K A + LVG N G V ++ AS P D+
Sbjct: 75 GEPEASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQF 132
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYN 170
+QN T N VP QATF F +P F LV ++ Y +++ + +Q +N
Sbjct: 133 YIQNFTALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFN 191
Query: 171 GTIEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTT 228
T+ V+E + E++F+ G+ LLV+ GL Q+ + K+ + KVE+GT +
Sbjct: 192 QTVTVIEREDGLDGETIFMYMFLAGLGLLVIVGLH---QLLESRKRKRPIQKVEMGTSSQ 248
Query: 229 DASMDEWLQGTAYTQSLSSKSKK 251
+ W+ Q + ++
Sbjct: 249 NDVDMSWIPQETLNQINKASPRR 271
>gi|169404009|ref|NP_003135.2| translocon-associated protein subunit alpha precursor [Homo
sapiens]
gi|22261821|sp|P43307.3|SSRA_HUMAN RecName: Full=Translocon-associated protein subunit alpha;
Short=TRAP-alpha; AltName: Full=Signal sequence receptor
subunit alpha; Short=SSR-alpha; Flags: Precursor
gi|5731113|gb|AAD48778.1|AF156965_1 translocon-associated protein alpha subunit [Homo sapiens]
gi|14043440|gb|AAH07710.1| Signal sequence receptor, alpha [Homo sapiens]
gi|30583613|gb|AAP36051.1| signal sequence receptor, alpha (translocon-associated protein
alpha) [Homo sapiens]
gi|60656207|gb|AAX32667.1| signal sequence receptor alpha [synthetic construct]
gi|60656209|gb|AAX32668.1| signal sequence receptor alpha [synthetic construct]
gi|119575607|gb|EAW55203.1| signal sequence receptor, alpha (translocon-associated protein
alpha), isoform CRA_b [Homo sapiens]
gi|123984663|gb|ABM83677.1| signal sequence receptor, alpha (translocon-associated protein
alpha) [synthetic construct]
gi|157928496|gb|ABW03544.1| signal sequence receptor, alpha (translocon-associated protein
alpha) [synthetic construct]
gi|208967406|dbj|BAG73717.1| signal sequence receptor alpha [synthetic construct]
Length = 286
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 12/203 (5%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G +P DT +F K A + LVG N G V ++ AS P D+
Sbjct: 75 GEPEASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQF 132
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYN 170
+QN T N VP QATF F +P F LV ++ Y +++ + +Q +N
Sbjct: 133 YIQNFTALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFN 191
Query: 171 GTIEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTT 228
T+ V+E + E++F+ G+ LLV+ GL Q+ + K+ + KVE+GT +
Sbjct: 192 QTVTVIEREDGLDGETIFMYMFLAGLGLLVIVGLH---QLLESRKRKRPIQKVEMGTSSQ 248
Query: 229 DASMDEWLQGTAYTQSLSSKSKK 251
+ W+ Q + ++
Sbjct: 249 NDVDMSWIPQETLNQINKASPRR 271
>gi|380798435|gb|AFE71093.1| translocon-associated protein subunit alpha precursor, partial
[Macaca mulatta]
Length = 275
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 12/203 (5%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G +P DT +F K A + LVG N G V ++ AS P D+
Sbjct: 64 GEPEASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQF 121
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYN 170
+QN T N VP QATF F +P F LV ++ Y +++ + +Q +N
Sbjct: 122 YIQNFTALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFN 180
Query: 171 GTIEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTT 228
T+ V+E + E++F+ G+ LLV+ GL Q+ + K+ + KVE+GT +
Sbjct: 181 QTVTVIEREDGLDGETIFMYMFLAGLGLLVIVGLH---QLLESRKRKRPIQKVEMGTSSQ 237
Query: 229 DASMDEWLQGTAYTQSLSSKSKK 251
+ W+ Q + ++
Sbjct: 238 NDVDMSWIPQETLNQINKASPRR 260
>gi|426351527|ref|XP_004043290.1| PREDICTED: translocon-associated protein subunit alpha isoform 1
[Gorilla gorilla gorilla]
Length = 286
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 12/203 (5%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G +P DT +F K A + LVG N G V ++ AS P D+
Sbjct: 75 GEPEASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQF 132
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYN 170
+QN T N VP QATF F +P F LV ++ Y +++ + +Q +N
Sbjct: 133 YIQNFTALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFN 191
Query: 171 GTIEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTT 228
T+ V+E + E++F+ G+ LLV+ GL Q+ + K+ + KVE+GT +
Sbjct: 192 QTVTVIEREDGLDGETIFMYMFLAGLGLLVIVGLH---QLLESRKRKRPIQKVEMGTSSQ 248
Query: 229 DASMDEWLQGTAYTQSLSSKSKK 251
+ W+ Q + ++
Sbjct: 249 NDVDMSWIPQETLNQINKASPRR 271
>gi|332246293|ref|XP_003272290.1| PREDICTED: translocon-associated protein subunit alpha isoform 1
[Nomascus leucogenys]
Length = 286
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 12/203 (5%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G +P DT +F K A + LVG N G V ++ AS P D+
Sbjct: 75 GEPEASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQF 132
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYN 170
+QN T N VP QATF F +P F LV ++ Y +++ + +Q +N
Sbjct: 133 YIQNFTALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFN 191
Query: 171 GTIEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTT 228
T+ V+E + E++F+ G+ LLV+ GL Q+ + K+ + KVE+GT +
Sbjct: 192 QTVTVIEREDGLDGETIFMYMFLAGLGLLVIVGLH---QLLESRKRKRPIQKVEMGTSSQ 248
Query: 229 DASMDEWLQGTAYTQSLSSKSKK 251
+ W+ Q + ++
Sbjct: 249 NDVDMSWIPQETLNQINKASPRR 271
>gi|384475871|ref|NP_001245081.1| translocon-associated protein subunit alpha precursor [Macaca
mulatta]
gi|332823259|ref|XP_003311142.1| PREDICTED: translocon-associated protein subunit alpha [Pan
troglodytes]
gi|402865734|ref|XP_003897066.1| PREDICTED: translocon-associated protein subunit alpha isoform 1
[Papio anubis]
gi|62897083|dbj|BAD96482.1| signal sequence receptor, alpha variant [Homo sapiens]
gi|383421067|gb|AFH33747.1| translocon-associated protein subunit alpha precursor [Macaca
mulatta]
gi|384949006|gb|AFI38108.1| translocon-associated protein subunit alpha precursor [Macaca
mulatta]
gi|410216068|gb|JAA05253.1| signal sequence receptor, alpha [Pan troglodytes]
gi|410216070|gb|JAA05254.1| signal sequence receptor, alpha [Pan troglodytes]
gi|410266478|gb|JAA21205.1| signal sequence receptor, alpha [Pan troglodytes]
gi|410266480|gb|JAA21206.1| signal sequence receptor, alpha [Pan troglodytes]
gi|410307964|gb|JAA32582.1| signal sequence receptor, alpha [Pan troglodytes]
gi|410349975|gb|JAA41591.1| signal sequence receptor, alpha [Pan troglodytes]
Length = 286
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 12/203 (5%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G +P DT +F K A + LVG N G V ++ AS P D+
Sbjct: 75 GEPEASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQF 132
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYN 170
+QN T N VP QATF F +P F LV ++ Y +++ + +Q +N
Sbjct: 133 YIQNFTALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFN 191
Query: 171 GTIEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTT 228
T+ V+E + E++F+ G+ LLV+ GL Q+ + K+ + KVE+GT +
Sbjct: 192 QTVTVIEREDGLDGETIFMYMFLAGLGLLVIVGLH---QLLESRKRKRPIQKVEMGTSSQ 248
Query: 229 DASMDEWLQGTAYTQSLSSKSKK 251
+ W+ Q + ++
Sbjct: 249 NDVDMSWIPQETLNQINKASPRR 271
>gi|403270963|ref|XP_003927420.1| PREDICTED: translocon-associated protein subunit alpha isoform 1
[Saimiri boliviensis boliviensis]
Length = 286
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 87/195 (44%), Gaps = 12/195 (6%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G +P DT +F K A + LVG N G V ++ AS P D+
Sbjct: 75 GEPEASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQF 132
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYN 170
+QN T N VP QATF F +P F LV ++ Y +++ + +Q +N
Sbjct: 133 YIQNFTALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFN 191
Query: 171 GTIEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTT 228
T+ V+E + E++F+ G+ LLV+ GL Q+ + K+ + KVE+GT +
Sbjct: 192 QTVTVIEREDGLDGETIFMYMFLAGLGLLVIVGLH---QLLESRKRKRPIQKVEMGTSSQ 248
Query: 229 DASMDEWLQGTAYTQ 243
+ W+ Q
Sbjct: 249 NDVDMSWIPQETLNQ 263
>gi|296197469|ref|XP_002746293.1| PREDICTED: translocon-associated protein subunit alpha isoform 1
[Callithrix jacchus]
Length = 286
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 12/203 (5%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G +P DT +F K A + LVG N G V ++ AS P D+
Sbjct: 75 GEPEASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQF 132
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYN 170
+QN T N VP QATF F +P F LV ++ Y +++ + +Q +N
Sbjct: 133 YIQNFTALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFN 191
Query: 171 GTIEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTT 228
T+ V+E + E++F+ G+ LLV+ GL Q+ + K+ + KVE+GT +
Sbjct: 192 QTVTVIEREDGLDGETIFMYMFLAGLGLLVIVGLH---QLLESRKRKRPIQKVEMGTSSQ 248
Query: 229 DASMDEWLQGTAYTQSLSSKSKK 251
+ W+ Q + ++
Sbjct: 249 NDVDMSWIPQETLNQINKASPRR 271
>gi|432859622|ref|XP_004069185.1| PREDICTED: translocon-associated protein subunit alpha-like
[Oryzias latipes]
Length = 287
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 18/211 (8%)
Query: 47 EDAQDFGDGTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASV 106
ED + + ++ P DT IF + A E + LVG N G + V +++AS
Sbjct: 69 EDDSEAAEKLVTSHPDADTTIIF--TTGEEFLANEIVKFLVGFTNKGSQTFTVQSLEASF 126
Query: 107 HLPFDHSLLVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVYEVDQ-H 162
P D +QN T N P AQA+F F QP F LV + Y +
Sbjct: 127 RYPQDFQFFIQNFTALPLNTVVQP-QAQASFEYSFIPAQPMAGRPFGLVILLSYLGSEGG 185
Query: 163 PYQSTFYNGTIEVVESGGFISIESVFLVT--LGIALLVLFGLWIHGQVKQLSKKTKKAP- 219
YQ+ YN T+ + E + E++F+ G+ L+LFG++ QV + S+ K+ P
Sbjct: 186 VYQTAIYNQTVTITEREEGLDGETMFMYVFLFGLVALMLFGMY---QVLE-SRTRKRLPV 241
Query: 220 KVEVGTGTTDASMDEWLQGTAYTQSLSSKSK 250
K+E GT + W+ T++L++ +K
Sbjct: 242 KIEKGTAGLNDVDISWIP----TETLNAMNK 268
>gi|395830443|ref|XP_003788336.1| PREDICTED: translocon-associated protein subunit alpha isoform 1
[Otolemur garnettii]
Length = 286
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 89/198 (44%), Gaps = 12/198 (6%)
Query: 60 APGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNL 119
+P DT +F K A + LVG N G V ++ AS P D+ +QN
Sbjct: 80 SPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQFYIQNF 137
Query: 120 TGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYNGTIEV 175
T N VP QATF F +P F LV ++ Y +++ + +Q +N T+ V
Sbjct: 138 TALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTV 196
Query: 176 VESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMD 233
+E + E++F+ G+ LLV+ GL Q+ + K+ + KVE+GT + +
Sbjct: 197 IEREDGLDGETIFMYMFLAGLGLLVVIGLH---QLLESRKRKRPIQKVEMGTSSQNDVDM 253
Query: 234 EWLQGTAYTQSLSSKSKK 251
W+ Q + ++
Sbjct: 254 SWIPQETLNQINKASPRR 271
>gi|148298667|ref|NP_001091760.1| signal sequence receptor precursor [Bombyx mori]
gi|87248609|gb|ABD36357.1| signal sequence receptor [Bombyx mori]
Length = 279
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 110/252 (43%), Gaps = 27/252 (10%)
Query: 7 RVFFFALLLLASPLL------QVAKCQSDSETGVAETEGGDLGIVGEDAQ-DFGDGTLSP 59
++ +F L++ + LL +A+ + D V + EG D +VG+DA D + +
Sbjct: 2 KLIYFTFLIVPAALLCLGSGNILARAEEDELDDVVDIEGEDNQVVGDDALVDDDESVVKS 61
Query: 60 APGVDTVCIFPKNSARV------VAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHS 113
+ +DT +F K + + AG E VG N G V +++AS P D++
Sbjct: 62 SQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVVESMEASFRYPMDYT 121
Query: 114 LLVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFY 169
+QN T +N P +ATF F + F L + Y + + YQ Y
Sbjct: 122 YYIQNFTALPYNREVKP-KQEATFAYSFIPNEAFAGRPFGLNVQLNYRDASGNAYQEAVY 180
Query: 170 NGTIEVVESGGFISIESVFL-VTLGI-ALLVLFGLWIHGQVKQLSKKTKKAPKV---EVG 224
N T+ +VE + E+ FL V LG +L L + GQ S +++P+ V
Sbjct: 181 NQTLNIVEVSEGLDGETFFLYVFLGAGGVLAL----VAGQQALASLARRRSPRSVSQPVE 236
Query: 225 TGTTDASMDEWL 236
TGT +WL
Sbjct: 237 TGTASEVDYDWL 248
>gi|45829529|gb|AAH68212.1| ssr1-prov protein [Xenopus (Silurana) tropicalis]
gi|134026196|gb|AAI36233.1| ssr1 protein [Xenopus (Silurana) tropicalis]
Length = 291
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 96/215 (44%), Gaps = 8/215 (3%)
Query: 41 DLGIVGEDAQDFGDGTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVI 100
DL E+ +D G +P DT +F K A + + LVG N G + V
Sbjct: 61 DLTEEKEEEEDLSSGEPKASPNADTTILFVKGED--FPANDIVKFLVGFTNKGPENFIVE 118
Query: 101 AIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY 157
++ AS P D+ +QN T N VP QATF F +P F LV ++ Y
Sbjct: 119 SLDASFRYPQDYQFYIQNFTALPL-NTVVPPQKQATFEYSFIPAEPMGGRPFGLVINLNY 177
Query: 158 -EVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTK 216
+ + + +Q +N T+ + E + E++F+ L +L + +H Q+ + K+ +
Sbjct: 178 KDANGNAFQDAVFNQTVTITEKEDGLDGETIFMYLFLGGLGLLVIVGLH-QLLESRKRKR 236
Query: 217 KAPKVEVGTGTTDASMDEWLQGTAYTQSLSSKSKK 251
A KVE+GT + W+ +Q + S+ K
Sbjct: 237 PAQKVEMGTSNQNDVDMSWIPPETLSQIMQSRRDK 271
>gi|185133142|ref|NP_001118198.1| translocon-associated protein subunit alpha precursor [Oncorhynchus
mykiss]
gi|1174450|sp|P45433.1|SSRA_ONCMY RecName: Full=Translocon-associated protein subunit alpha;
Short=TRAP-alpha; AltName: Full=Signal sequence receptor
subunit alpha; Short=SSR-alpha; Flags: Precursor
gi|541751|emb|CAA78291.1| SSR alpha subunit [Oncorhynchus mykiss]
Length = 288
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 15/210 (7%)
Query: 50 QDFGDGTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLP 109
+D G ++ P DT +F + A E + LVG N G V +++AS P
Sbjct: 71 EDAAVGDVTSHPDADTTIVF--VTGEEFPANEIVKFLVGFTNKGSQDFTVHSLEASFRYP 128
Query: 110 FDHSLLVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVYEVDQ-HPYQ 165
D +QN T + P QA+F F QP F LV + Y+ + + +Q
Sbjct: 129 QDFQFYIQNFTALPLSTVVQP-QKQASFEYSFIPAQPMAGRPFGLVILLNYQDSEGNGFQ 187
Query: 166 STFYNGTIEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAP-KVE 222
+ YN T+ +VE + E++F+ G+ +L +FG++ QV + S+ K+ P KVE
Sbjct: 188 TAIYNQTVTIVELEEGLDGETIFMYIFLTGLVVLAVFGMY---QVLE-SRTRKRFPVKVE 243
Query: 223 VGTGTTDASMDEWL-QGTAYTQSLSSKSKK 251
GTG + W+ Q T S +S S K
Sbjct: 244 TGTGGMNGVDISWIPQETLNIMSKASASPK 273
>gi|239985603|ref|NP_001139832.1| Translocon-associated protein subunit alpha precursor [Salmo salar]
gi|221219138|gb|ACM08230.1| Translocon-associated protein subunit alpha precursor [Salmo salar]
Length = 290
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 15/210 (7%)
Query: 50 QDFGDGTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLP 109
+D G ++ P DT +F + A E + LVG N G V +++AS P
Sbjct: 73 EDAAVGDVTSHPDADTTIVF--VTGEEFPANEIVKFLVGFTNKGSQDFTVHSLEASFRYP 130
Query: 110 FDHSLLVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVYEVDQ-HPYQ 165
D +QN T + P QA+F F QP F LV + Y+ + + +Q
Sbjct: 131 QDFQFYIQNFTALPLSTVVQP-QKQASFEYSFIPAQPMAGRPFGLVILLNYQDSEGNGFQ 189
Query: 166 STFYNGTIEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAP-KVE 222
+ YN T+ +VE + E++F+ G+ +L +FG++ QV + S+ K+ P KVE
Sbjct: 190 TAIYNQTVTIVELEEGLDGETIFMYIFLTGLVVLAVFGMY---QVLE-SRTRKRFPVKVE 245
Query: 223 VGTGTTDASMDEWL-QGTAYTQSLSSKSKK 251
GTG + W+ Q T S +S S K
Sbjct: 246 TGTGGMNGVDISWIPQETLNIMSKASASPK 275
>gi|348508028|ref|XP_003441557.1| PREDICTED: translocon-associated protein subunit alpha-like
[Oreochromis niloticus]
Length = 286
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 80/177 (45%), Gaps = 14/177 (7%)
Query: 57 LSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLV 116
L+ P DT IF + A E LVG N G V +++AS P D +
Sbjct: 78 LASHPDADTTIIF--TTGEEFPANEIVRFLVGFSNKGSQEFTVQSLEASFRYPQDFQFFI 135
Query: 117 QNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVYE-VDQHPYQSTFYNGT 172
QN T N P AQA+F F QP F LV + Y+ + +Q+ YN T
Sbjct: 136 QNFTALPLNTVVKP-QAQASFEYSFIPAQPMAGRPFGLVILLNYQDTEGSVFQTAVYNQT 194
Query: 173 IEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGT 227
+ + E + E++F+ G+ L+LFG++ QV L +TKK V++ GT
Sbjct: 195 VTITEREEGLDGETMFMYVFLAGLVSLLLFGMY---QV--LDSRTKKRLSVKIEKGT 246
>gi|224045166|ref|XP_002199806.1| PREDICTED: translocon-associated protein subunit alpha isoform 1
[Taeniopygia guttata]
Length = 288
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 84/188 (44%), Gaps = 12/188 (6%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G +P DT +F K A + LVG N G V ++ AS P D+
Sbjct: 77 GEPKASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQF 134
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYN 170
+QN T + N VP QATF F +P F LV ++ Y + + +Q +N
Sbjct: 135 YIQNFTALSL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYRDASGNIFQDAVFN 193
Query: 171 GTIEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTT 228
T+ ++E + E++F+ G+ LLV+ GL Q+ + K+ + KVE+GT
Sbjct: 194 QTVTIIEKEDGLDGETIFMYMFLAGLGLLVIVGLH---QLLESRKRKRPVQKVEMGTSNQ 250
Query: 229 DASMDEWL 236
+ W+
Sbjct: 251 NDVDMSWI 258
>gi|57530808|ref|NP_001006375.1| translocon-associated protein subunit alpha precursor [Gallus
gallus]
gi|53127702|emb|CAG31180.1| hypothetical protein RCJMB04_2p21 [Gallus gallus]
Length = 288
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 12/188 (6%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G +P DT +F K A + LVG N G V ++ AS P D+
Sbjct: 77 GEPKASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQF 134
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYN 170
+QN T N VP QATF F +P F LV ++ Y + + +Q +N
Sbjct: 135 YIQNFTALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYRDANGKMFQDAVFN 193
Query: 171 GTIEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTT 228
T+ ++E + E++F+ G+ LLV+ GL Q+ + K+ + KVE+GT
Sbjct: 194 QTVTIIEKEDGLDGETIFMYMFLAGLGLLVIVGLH---QLLESRKRKRPVQKVEMGTSNQ 250
Query: 229 DASMDEWL 236
+ W+
Sbjct: 251 NDVDMSWI 258
>gi|320164410|gb|EFW41309.1| hypothetical protein CAOG_06441 [Capsaspora owczarzaki ATCC 30864]
Length = 250
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 108/240 (45%), Gaps = 13/240 (5%)
Query: 18 SPLLQVAKCQSDSETGVAETEGGDLGIVGEDAQDFGDGTLS---PAPGVDTVCIFPKNSA 74
SP + V + ET V EG GIV +F + P+P V T +F +
Sbjct: 18 SPFVVVRAQDVEDETVV---EGESDGIVDIPDVNFSEEEFRIAGPSPDVKTTILFTETQD 74
Query: 75 RVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQ 134
GE L+G+ N G + + VI + P D + QN T + V Q
Sbjct: 75 NEFPGGEIVRALIGVSNTGLNDITVIGVVGQFRHPQDLKHINQNFTAKEL-GVNVVAQTQ 133
Query: 135 ATFPIHFCCQ-QPGTFDLVGSIVY-EVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTL 192
A+F F + + + L+ +I Y + Y + +N T+ V+E+ IE+++ +
Sbjct: 134 ASFEYVFRPEYEARSHFLILNIYYNDTTGAEYVDSVFNSTVTVIEADEPFQIETLYTIVT 193
Query: 193 GIALLVLFGLWIHGQVK-QLSKKTKKAPKVEVGTGTTDASMDEWLQGTAYTQSLSSKSKK 251
IAL+ G + + Q+ Q +KKTKK +E TGT+ + +EWL TQ + K +K
Sbjct: 194 LIALIGGGGFFAYQQLAPQSAKKTKKVTAIE--TGTSSSGSNEWLSNLN-TQPVGKKVRK 250
>gi|47227291|emb|CAF96840.1| unnamed protein product [Tetraodon nigroviridis]
Length = 327
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 85/186 (45%), Gaps = 12/186 (6%)
Query: 57 LSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLV 116
LS P DT IF + A E + LVG N G V +++AS P D +
Sbjct: 119 LSSHPDADTTIIF--VTGEEFPANEIVKFLVGFTNKGSQDFTVRSLEASFRYPQDFQFYI 176
Query: 117 QNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYNGT 172
QN T + P AQA+F F QP F LV + Y + + +Q+ YN T
Sbjct: 177 QNFTALPLDTVVQP-KAQASFEYSFIPAQPMAGRPFGLVILLNYLDSEGGVFQTAVYNQT 235
Query: 173 IEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDA 230
+ + E+ + E++F+ G+ +L+LFG++ QV + + + KVE GTG +
Sbjct: 236 VTITETEEGLDGETMFMYIFLGGLVVLMLFGMY---QVLETRTRKRIPLKVEKGTGGMND 292
Query: 231 SMDEWL 236
W+
Sbjct: 293 VDISWI 298
>gi|442755137|gb|JAA69728.1| Putative translocon-associated complex trap alpha subunit [Ixodes
ricinus]
Length = 281
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 92/199 (46%), Gaps = 14/199 (7%)
Query: 48 DAQDFGDGTLSPAPGVDTVCIF--PKNSARVVAAGEETELLVGMKNDGESSVNVIAIQAS 105
+ +D G L P+P DT +F P+ + AG+E LVG N G + + AS
Sbjct: 52 EPEDDGSQPLKPSPDGDTFLLFTKPQGFQSKLPAGKEVHFLVGFTNKGSKDFVLDTMDAS 111
Query: 106 VHLPFDHSLLVQNLTGQAFNNATVPVSAQATFPIHFCCQQPGT---FDLVGSIVY-EVDQ 161
P D S +QN T +N P QAT F + + F L +++Y + D
Sbjct: 112 FRYPMDFSFYIQNFTTIGYNKVVKP-KQQATLSYSFFASESFSARPFGLTVNLMYRDADG 170
Query: 162 HPYQSTFYNGTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQ--VKQLSKKTKKAP 219
PY +N T+EVVE + E+ FL LVL L + GQ + +SKK K AP
Sbjct: 171 APYLDAVFNETVEVVEVDEGLDGETFFLYMFLATCLVL--LLVAGQQFLGSVSKK-KAAP 227
Query: 220 --KVEVGTGTTDASMDEWL 236
KVE+GT + +WL
Sbjct: 228 KQKVEMGTQNVNDVDYDWL 246
>gi|189069198|dbj|BAG35536.1| unnamed protein product [Homo sapiens]
Length = 286
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 19/212 (8%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G +P DT +F K A + LVG N G V ++ AS P D+
Sbjct: 75 GEPEASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQF 132
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYN 170
+QN T N VP QATF F +P F LV ++ Y +++ + +Q +N
Sbjct: 133 YIQNFTALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFN 191
Query: 171 GTIEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTT 228
T+ V+E + E++F+ G+ LLV+ G Q+ + K+ + KVE+GT +
Sbjct: 192 QTVTVIEREDGLDGETIFMYMFLAGLGLLVIVG---PHQLLESRKRKRPIQKVEMGTSSQ 248
Query: 229 DASMDEWLQ-------GTAYTQSLSSKSKKKK 253
+ W+ A + L K +K+
Sbjct: 249 NDVDMSWIPQETLNQINKASPRRLPRKRAQKR 280
>gi|62897177|dbj|BAD96529.1| signal sequence receptor, alpha variant [Homo sapiens]
Length = 286
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 19/212 (8%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G +P DT +F K A + LVG N G V ++ AS P D+
Sbjct: 75 GEPEASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQF 132
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYN 170
+QN T N VP QATF F +P F LV ++ Y +++ + +Q +N
Sbjct: 133 YIQNFTALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFN 191
Query: 171 GTIEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTT 228
T+ V+E + E++F+ G+ L V+ GL Q+ + K+ + KVE+GT +
Sbjct: 192 QTVTVIEREDGLDGETIFMYMFLAGLGLPVIVGLH---QLLESRKRKRPIQKVEMGTSSQ 248
Query: 229 DASMDEWLQ-------GTAYTQSLSSKSKKKK 253
+ W+ A + L K +K+
Sbjct: 249 NDVDMSWIPQETLNQINKASPRRLPRKRAQKR 280
>gi|302849020|ref|XP_002956041.1| hypothetical protein VOLCADRAFT_109993 [Volvox carteri f.
nagariensis]
gi|300258767|gb|EFJ43001.1| hypothetical protein VOLCADRAFT_109993 [Volvox carteri f.
nagariensis]
Length = 244
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 87/193 (45%), Gaps = 11/193 (5%)
Query: 56 TLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLL 115
L PA + T FP R AGE ++++G++N+ + N+ I S++ +
Sbjct: 36 NLPPAGEISTGYFFPGYPTRQFIAGEPVKVVLGVRNEASENYNISMIMGSLNNAQEFRAY 95
Query: 116 VQNLTGQAFNNATVP---VSAQATFPIHFCCQQPGTFDLVGSIVYEVDQHPYQSTFYNGT 172
N T Q + P +S + TF + P + + ++ YE +TF+N T
Sbjct: 96 YWNFTQQLYFQIVEPSKELSVEYTF-LPPKDLPPNDYQVALTVFYEAADGFKSTTFFNQT 154
Query: 173 IEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQ--LSKKT--KKAPKVEVGTGTT 228
I V+E G I + +FL + I L+ + VK+ + K K+ KVEV
Sbjct: 155 ITVLEKGQLIDWKLIFLYAIFIGLVFAGAYFAWSAVKESPIYKNVVGKRTRKVEVSRAYN 214
Query: 229 DASMDEWLQGTAY 241
D DEW++GT Y
Sbjct: 215 D---DEWVKGTPY 224
>gi|22761792|dbj|BAC11701.1| unnamed protein product [Homo sapiens]
Length = 259
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 87/194 (44%), Gaps = 18/194 (9%)
Query: 64 DTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQA 123
D V FP N+ + LVG N G V ++ AS P D+ +QN T
Sbjct: 63 DLVEDFPANNI--------VKFLVGFTNKGTEDFIVESLDASFRYPQDYQFYIQNFTALP 114
Query: 124 FNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYNGTIEVVESG 179
N VP QATF F +P F LV ++ Y +++ + +Q +N T+ V+E
Sbjct: 115 L-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTVIERE 173
Query: 180 GFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEWLQ 237
+ E++F+ G+ LLV+ GL Q+ + K+ + KVE+GT + + W+
Sbjct: 174 DGLDGETIFMYMFLAGLGLLVIVGLH---QLLESRKRKRPIQKVEMGTSSQNDVDMSWIP 230
Query: 238 GTAYTQSLSSKSKK 251
Q + ++
Sbjct: 231 QETLNQINKASPRR 244
>gi|432926499|ref|XP_004080859.1| PREDICTED: translocon-associated protein subunit alpha-like isoform
1 [Oryzias latipes]
Length = 292
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 15/208 (7%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G + +P DT +F K A + L+G N G + V ++ AS P D+
Sbjct: 81 GEVKASPNADTTILFVKGED--FPANNIVKFLLGFTNKGPENFVVDSLDASFRYPQDYQF 138
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYN 170
+QN T VP QATF F +P F LV ++ Y + + +Q +N
Sbjct: 139 YIQNFTALQL-GTVVPPGRQATFEYSFIPAEPMGGRPFGLVINLNYKDSSGNIFQDAVFN 197
Query: 171 GTIEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTT 228
T+ + E + E++F+ G+ LLV+ GL Q+ + K+ + A KVE GT +
Sbjct: 198 QTVTITEREDGLDGETIFMYVFLSGLGLLVIVGLH---QLLESRKRRRPAQKVETGTSSH 254
Query: 229 DASMDEWLQGTAYTQ---SLSSKSKKKK 253
+ W+ Q + +S +K+
Sbjct: 255 NDVDMSWIPAETLNQINKASPRRSPRKR 282
>gi|402586709|gb|EJW80646.1| hypothetical protein WUBG_08448 [Wuchereria bancrofti]
Length = 254
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 13/207 (6%)
Query: 54 DGTLSPAPGVDTVCIF--PKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFD 111
D + P+P V IF P++S + G+ + L+G +N GE V+ + S P D
Sbjct: 37 DNIMRPSPDVHVAFIFTHPEHSEGL-PGGKLVQFLMGFQNHGEKEFTVLFCETSFRYPQD 95
Query: 112 HSLLVQNLTGQAFNNATVPVSAQATFPIHF--CCQQPGT-FDLVGSIVYE-VDQHPYQST 167
S +QN + +N V +ATF F Q G LV + YE D Y++T
Sbjct: 96 FSYHIQNFSRVQYNRV-VAAKQEATFNYAFYPSDQFAGRPLGLVVELQYEDSDGKGYKNT 154
Query: 168 FYNGTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSK-----KTKKAPKVE 222
+N TI +VE + E+ FL + A++VL L + +L++ K+++ E
Sbjct: 155 VFNETITIVEDESNFNTETGFLYVIFAAVVVLILLAGQHFLSKLTRKHGMAKSRQTQLTE 214
Query: 223 VGTGTTDASMDEWLQGTAYTQSLSSKS 249
+GTG + EW+ + S KS
Sbjct: 215 IGTGKKNEVDFEWIPREVLNHNKSPKS 241
>gi|326428513|gb|EGD74083.1| hypothetical protein PTSG_05775 [Salpingoeca sp. ATCC 50818]
Length = 260
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 91/203 (44%), Gaps = 12/203 (5%)
Query: 57 LSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLV 116
L P VD IFP + AG +VG+ N +S V +I+ S+ PFD++
Sbjct: 63 LGPTKLVDVTAIFPDFPTLEIPAGAIVTAVVGLDNKADSPFVVSSIEGSLGAPFDYTQSF 122
Query: 117 QNLTGQAFNNATVPVSAQATFPIHFCCQ---QPGTFDLVGSIVYEVDQHP--YQSTFYNG 171
QN T V QATF F +P F L +V DQ + +T +N
Sbjct: 123 QNFTAMPI-ELRVDAGQQATFTYKFRPSDRFEPRDFAL-AVVVNLKDQSEGLFVNTAFNQ 180
Query: 172 TIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPK-VEVGTGTTDA 230
TI + + +S +++F L A+ VL +++ + K +K TK+A K VE G G
Sbjct: 181 TITLTDPESDVSSKAIFGYILFAAVGVL--AFLYSRPKPATKPTKQAAKRVETGAGMVQE 238
Query: 231 SMDEWLQGTAYTQSLSSKSKKKK 253
DEWL T Q K ++K
Sbjct: 239 --DEWLADTNVVQPRRRKRSERK 259
>gi|321459501|gb|EFX70554.1| hypothetical protein DAPPUDRAFT_309405 [Daphnia pulex]
Length = 293
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 14/190 (7%)
Query: 55 GTLSPAPGVDTVCIFPKNSARV---VAAGEETELLVGMKNDGESSVNVIAIQASVHLPFD 111
G LS +P +T +F K + + AG+ E LVG N G + + ++A+ H P D
Sbjct: 68 GKLSASPDAETTILFTKPAGAASSELPAGQIAEFLVGFTNKGNQDMVIETVEAAFHYPMD 127
Query: 112 HSLLVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQST 167
H+ ++QN + + P QAT F +P F L ++ Y + + Y
Sbjct: 128 HTFVIQNFSAIQYFKVVKP-QQQATVAYSFIPAEPFAGRPFGLSINLAYRDTEGRTYSEA 186
Query: 168 FYNGTIEVVESGGFISIESVFL---VTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVG 224
+N TI +VE + E+ FL + G+ LL++ G + + K+ ++E G
Sbjct: 187 VFNETINIVEVDEGLDGETFFLYLFLAAGVVLLLVLG---QQALASMGKRRGGGSRLETG 243
Query: 225 TGTTDASMDE 234
T S+ +
Sbjct: 244 TARNTGSVSD 253
>gi|148231688|ref|NP_001083984.1| Translocon-associated protein subunit alpha-like precursor [Xenopus
laevis]
gi|50415146|gb|AAH77979.1| Ssr1 protein [Xenopus laevis]
Length = 291
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 8/215 (3%)
Query: 41 DLGIVGEDAQDFGDGTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVI 100
DL E+ +D G + DT +F K A + + LVG N G + +
Sbjct: 61 DLTEEKEEEEDLSSGEPKASLNADTTILFVKGED--FPANDIVKFLVGFTNKGPENFIIE 118
Query: 101 AIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY 157
++ AS P D+ +QN T N VP QATF F +P F LV ++ Y
Sbjct: 119 SLDASFRYPQDYQFYIQNFTALPL-NTVVPPQKQATFEYSFIPAEPMGGRPFGLVINLNY 177
Query: 158 -EVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTK 216
+ + + +Q +N T+ ++E + E++F+ L +L + +H Q+ + K+ +
Sbjct: 178 KDANGNAFQDAVFNQTVTIIEKEDGLDGETIFMYLFLGGLGLLVVVGLH-QLLESRKRKR 236
Query: 217 KAPKVEVGTGTTDASMDEWLQGTAYTQSLSSKSKK 251
A KVE+GT + W+ +Q + S+ K
Sbjct: 237 PAQKVEMGTSNQNDVDMSWIPPETLSQIMQSRRDK 271
>gi|395512033|ref|XP_003760252.1| PREDICTED: translocon-associated protein subunit alpha [Sarcophilus
harrisii]
Length = 315
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 8/211 (3%)
Query: 45 VGEDAQDFGDGTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQA 104
+ E+ ++ G +P DT +F K A + LVG N G V ++ A
Sbjct: 89 LAEEKEEDLSGEPEASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDA 146
Query: 105 SVHLPFDHSLLVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVD 160
S P D+ +QN T N VP QATF F +P F LV ++ Y +++
Sbjct: 147 SFRYPQDYQFYIQNFTALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLN 205
Query: 161 QHPYQSTFYNGTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPK 220
+ +Q +N T+ ++E + E++F+ +A L L + Q+ + K+ + A K
Sbjct: 206 GNVFQDAVFNQTVTIIEREDGLDGETIFMYMF-LAGLGLLVVVGLHQLLESRKRKRPAQK 264
Query: 221 VEVGTGTTDASMDEWLQGTAYTQSLSSKSKK 251
VE+GT + W+ Q + S+ K
Sbjct: 265 VEMGTSNQNDVDMSWIPQETLNQIMQSRRDK 295
>gi|62858223|ref|NP_001016912.1| signal sequence receptor, alpha precursor [Xenopus (Silurana)
tropicalis]
gi|89272060|emb|CAJ82864.1| signal sequence receptor, alpha (translocon-associated protein
alpha) [Xenopus (Silurana) tropicalis]
Length = 286
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 98/220 (44%), Gaps = 11/220 (5%)
Query: 41 DLGIVGEDAQDFGDGTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVI 100
DL E+ +D G +P DT +F K A + + LVG N G + V
Sbjct: 61 DLTEEKEEEEDLSSGEPKASPNADTTILFVK--GEDFPANDIVKFLVGFTNKGPENFIVE 118
Query: 101 AIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY 157
++ AS P D+ +QN T N VP QATF F +P F LV ++ Y
Sbjct: 119 SLDASFRYPQDYQFYIQNFTALPL-NTVVPPQKQATFEYSFIPAEPMGGRPFGLVINLNY 177
Query: 158 -EVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTK 216
+ + + +Q +N T+ + E + E++F+ L +L + +H Q+ + K+ +
Sbjct: 178 KDANGNAFQDAVFNQTVTITEKEDGLDGETIFMYLFLGGLGLLVIVGLH-QLLESRKRKR 236
Query: 217 KAPKVEVGTGTTDASMDEWLQGTAYTQ---SLSSKSKKKK 253
A KVE+GT + W+ +Q + +S +K+
Sbjct: 237 PAQKVEMGTSNQNDVDMSWIPPETLSQINKASPRRSPRKR 276
>gi|291232383|ref|XP_002736132.1| PREDICTED: lethal (1) G0320-like [Saccoglossus kowalevskii]
Length = 301
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 83/185 (44%), Gaps = 6/185 (3%)
Query: 57 LSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLV 116
L P+ +T +F S + + AG+ +LVG N G+ V + AS P D S +
Sbjct: 88 LKPSVDAETTILFTLGSEQELPAGKLIRVLVGFSNKGDQDFYVETMDASFRYPQDFSFYI 147
Query: 117 QNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYNGT 172
QN T + + TV QATF F + F LV ++ Y + + +Q YN T
Sbjct: 148 QNFTTFRY-DVTVQPEKQATFEYVFTPNEAFAGRPFGLVLNLNYKDAEGTVFQDAVYNET 206
Query: 173 IEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPK-VEVGTGTTDAS 231
I + E + E+ FL IA++VL + + KK + A + +E+GT
Sbjct: 207 INIFEIDEGLDTETFFLYVFLIAIVVLLAVGGQQLLTNFGKKKRPAKQTIEIGTQNHSDV 266
Query: 232 MDEWL 236
+W+
Sbjct: 267 DYDWI 271
>gi|62548848|gb|AAX86873.1| translocon-associated protein alpha, muscle specific isoform [Mus
musculus]
Length = 298
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 87/196 (44%), Gaps = 8/196 (4%)
Query: 60 APGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNL 119
+P DT +F K A + LVG N G V ++ AS P D+ +QN
Sbjct: 80 SPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQFYIQNF 137
Query: 120 TGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYNGTIEV 175
T N VP QATF F +P F LV ++ Y +++ + +Q +N T+ V
Sbjct: 138 TALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTV 196
Query: 176 VESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEW 235
+E + E++F+ +A L L + Q+ + K+ + KVE+GT + + W
Sbjct: 197 IEREDGLDGETIFMYMF-LAGLGLLVVVGLHQLLESRKRKRPIQKVEMGTSSQNDVDMSW 255
Query: 236 LQGTAYTQSLSSKSKK 251
+ Q + S+ K
Sbjct: 256 IPQETLNQIMQSRRDK 271
>gi|303273390|ref|XP_003056056.1| translocon-associated protein subunit alpha precursor [Micromonas
pusilla CCMP1545]
gi|226462140|gb|EEH59432.1| translocon-associated protein subunit alpha precursor [Micromonas
pusilla CCMP1545]
Length = 249
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 99/212 (46%), Gaps = 30/212 (14%)
Query: 63 VDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQ 122
+DTV FP + + +GE +L+G +N G V V I S++ S V+N T
Sbjct: 45 IDTVYAFPVSREGGLTSGERHTILLGFRNSGVLPVTVSQIAGSLNSLNQFSFYVRNFTAV 104
Query: 123 AFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVYEVDQHPYQSTFYNGTIEVVESG 179
+ ++ P +ATF F + + L ++ + D Y +TF+N T+ V++
Sbjct: 105 DYMSSVEP-GKEATFEYSFMLEPEHAGHVYALCFTVFFHDDADTYATTFFNTTVVVLDPN 163
Query: 180 GFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVE-------VGTGT----- 227
+ +SV L T + +L L+G+++ ++ T P +E +G G
Sbjct: 164 TVVDAKSVSLYTF-LVVLFLYGVYLSLKI------TCALPVIESCMKRSFIGDGVRQVFD 216
Query: 228 --TDASMD----EWLQGTAYTQSLSSKSKKKK 253
TD S EWL+GT++T+ S +KK+K
Sbjct: 217 IGTDRSQQNNNTEWLKGTSWTE-FGSNNKKRK 247
>gi|307109372|gb|EFN57610.1| hypothetical protein CHLNCDRAFT_59615 [Chlorella variabilis]
Length = 216
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 87/191 (45%), Gaps = 9/191 (4%)
Query: 63 VDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQ 122
V + +P+N G+ ++G++N G + +NV A++ P++ S+ + N TG
Sbjct: 28 VQVLHWWPENPTMSFFPGKAASCVLGVRNTGVAPLNVTYALANLASPYNASMNLFNFTGS 87
Query: 123 AFNNATVPVS----AQATFPIHFCCQQPGT-FDLVGSIVYEVDQHPYQSTFYNGTIEVVE 177
+ VP++ A + I F Q P F L +++Y + Q F+N TI V+E
Sbjct: 88 FLGD--VPLAPGEETSAEYAIFFPRQLPAREFILKVNLIYSLGSQYQQKMFFNETINVIE 145
Query: 178 SGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEWLQ 237
+ + L +G+A L G+ G SK K K V T ++ +EWL+
Sbjct: 146 EPTLFDTQLIGLYLIGLAALA--GIVYSGTEFAKSKGWIKKSKPVVRPAATSSNKEEWLR 203
Query: 238 GTAYTQSLSSK 248
GTA L K
Sbjct: 204 GTAADPKLRKK 214
>gi|349804551|gb|AEQ17748.1| putative signal sequence alpha (translocon-associated protein
alpha) [Hymenochirus curtipes]
Length = 274
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 11/201 (5%)
Query: 60 APGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNL 119
+P DT +F K A + + LVG N G + ++ AS P D+ +QN
Sbjct: 68 SPNADTTILFVK--GEDFPANDIVKFLVGFTNKGAEDFIIESLDASFRYPQDYQFYIQNF 125
Query: 120 TGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYNGTIEV 175
T N VP QATF F +P F LV ++ Y + + + +Q +N T+ +
Sbjct: 126 TALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDSNGNAFQDAVFNQTVTI 184
Query: 176 VESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEW 235
+E + E++F+ L +L + +H Q+ + K+ + A KVE+GT + W
Sbjct: 185 IEKEDGLDGETIFMYLFLGGLGLLVIVGLH-QLLESRKRKRPAQKVEMGTSNQNDVDMSW 243
Query: 236 LQGTAYTQ---SLSSKSKKKK 253
+ +Q + +S +KK
Sbjct: 244 IPPETLSQINKASPKRSPRKK 264
>gi|307211436|gb|EFN87563.1| Translocon-associated protein subunit alpha [Harpegnathos saltator]
Length = 284
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 109/254 (42%), Gaps = 26/254 (10%)
Query: 3 MKNFRVFFF----ALLLLASPLLQVAKCQSDSETGVAETEGGDLGIVGEDAQDFGDGTLS 58
MK F VF F A L A+ V + ++ + + EG + I+ E+ + + T +
Sbjct: 1 MKRFNVFLFVTLSAFALAANTGHGVYAQEDENIDDIVDVEGEEGSIIAEEETE--EDTSN 58
Query: 59 PAPGVDTVCIFPKN-----SARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHS 113
+ DT +F K S + AG E LVG N GE + ++ AS D +
Sbjct: 59 ASADADTTILFTKPIHNALSTLELPAGNIVEFLVGFTNKGEGDFVLESLDASFRYAMDFN 118
Query: 114 LLVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFY 169
+QN + FN P +AT F + F L ++ Y +++ Y +
Sbjct: 119 FYIQNFSTFTFNKIVKP-KHEATLAYSFIPAENFAGRPFGLNVNLNYRDINGISYNEAVF 177
Query: 170 NGTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQ-------VKQLSKKTKKAPKVE 222
N TI+++E + E++FL A ++L + GQ K S T+KAP VE
Sbjct: 178 NETIQIIEIDDGLDGETIFLYVFLTACVIL--TLVGGQQLLSSLGRKSRSSTTRKAP-VE 234
Query: 223 VGTGTTDASMDEWL 236
+GT + +WL
Sbjct: 235 MGTSNPNNVDYDWL 248
>gi|126322035|ref|XP_001367903.1| PREDICTED: translocon-associated protein subunit alpha-like
[Monodelphis domestica]
Length = 285
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 95/220 (43%), Gaps = 15/220 (6%)
Query: 45 VGEDAQDFGDGTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQA 104
+ E+ ++ G +P DT +F K A + LVG N G V ++ A
Sbjct: 64 LAEEKEEDLSGEPEASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDA 121
Query: 105 SVHLPFDHSLLVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVD 160
S P D+ +QN T N VP QATF F +P F LV ++ Y +++
Sbjct: 122 SFRYPQDYQFYIQNFTALPL-NTIVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLN 180
Query: 161 QHPYQSTFYNGTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPK 220
+ +Q +N T+ ++E + E++F+ +A L L + Q+ + K+ + A K
Sbjct: 181 GNVFQDAVFNQTVTIIEREDGLDGETIFMYMF-LAGLGLLVVVGLHQLLESRKRKRPAQK 239
Query: 221 VEVGTGTTDASMDEWLQ-------GTAYTQSLSSKSKKKK 253
VE+GT + W+ A + L K +K+
Sbjct: 240 VEMGTSNQNDVDMSWIPQETLNQINKASPRRLPRKRAQKR 279
>gi|348539770|ref|XP_003457362.1| PREDICTED: translocon-associated protein subunit alpha-like isoform
2 [Oreochromis niloticus]
Length = 291
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 89/201 (44%), Gaps = 8/201 (3%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G + +P DT +F K A + + L+G N G + V ++ AS P D+
Sbjct: 80 GEVKASPNADTTILFVKGED--FPANDIVKFLLGFTNKGSENFIVESLDASFRYPQDYQF 137
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVYEVDQ-HPYQSTFYN 170
+QN T VP S QATF F +P F LV ++ Y+ + +Q +N
Sbjct: 138 YIQNFTALQL-GTVVPPSRQATFEYSFIPAEPMGGRPFGLVINLNYKDSSGNVFQDAVFN 196
Query: 171 GTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDA 230
T+ + E + E++F+ L +L + +H Q+ + K+ + APKVE GT + +
Sbjct: 197 QTVTITEREDGLDGETIFMYVFLSGLGLLVVVGLH-QLLESRKRRRPAPKVETGTSSHND 255
Query: 231 SMDEWLQGTAYTQSLSSKSKK 251
W+ Q + K+
Sbjct: 256 VDLSWIPTETLNQINKASPKR 276
>gi|348539768|ref|XP_003457361.1| PREDICTED: translocon-associated protein subunit alpha-like isoform
1 [Oreochromis niloticus]
Length = 291
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 89/201 (44%), Gaps = 8/201 (3%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G + +P DT +F K A + + L+G N G + V ++ AS P D+
Sbjct: 80 GEVKASPNADTTILFVKGED--FPANDIVKFLLGFTNKGSENFIVESLDASFRYPQDYQF 137
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVYEVDQ-HPYQSTFYN 170
+QN T VP S QATF F +P F LV ++ Y+ + +Q +N
Sbjct: 138 YIQNFTALQL-GTVVPPSRQATFEYSFIPAEPMGGRPFGLVINLNYKDSSGNVFQDAVFN 196
Query: 171 GTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDA 230
T+ + E + E++F+ L +L + +H Q+ + K+ + APKVE GT + +
Sbjct: 197 QTVTITEREDGLDGETIFMYVFLSGLGLLVVVGLH-QLLESRKRRRPAPKVETGTSSHND 255
Query: 231 SMDEWLQGTAYTQSLSSKSKK 251
W+ Q + K+
Sbjct: 256 VDLSWIPTETLNQINKASPKR 276
>gi|348566222|ref|XP_003468901.1| PREDICTED: translocon-associated protein subunit alpha-like [Cavia
porcellus]
Length = 286
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 86/187 (45%), Gaps = 10/187 (5%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G +P DT +F K A + LVG N G V ++ AS P D+
Sbjct: 75 GEPEASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQF 132
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYN 170
+QN T N VP QATF F +P F LV ++ Y ++ + +Q +N
Sbjct: 133 YIQNFTALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLSGNVFQDAVFN 191
Query: 171 GTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGT-TD 229
T+ ++E + E++F+ L +L + +H Q+ + K+ + A KVE+GT + +D
Sbjct: 192 QTVTIIEREDGLDGETIFMYMFLAGLGLLLIVGLH-QLLESRKRKRPAQKVEMGTSSQSD 250
Query: 230 ASMDEWL 236
M W+
Sbjct: 251 VDM-SWI 256
>gi|281202864|gb|EFA77066.1| translocon-associated protein TRAP alpha subunit [Polysphondylium
pallidum PN500]
Length = 241
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 86/197 (43%), Gaps = 12/197 (6%)
Query: 68 IFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNA 127
IFP + AG E+LVG N+ E + NV I AS++ P + +QN T + A
Sbjct: 44 IFPDYPNKEFPAGSVIEVLVGFSNNAEVAYNVSGIFASLNHPQEMKYYIQNYTRGEYGIA 103
Query: 128 TVPVSAQATFPIHFCCQ---QPGTFDLVGSIVYEVDQHPYQSTFYNGTIEVVESGGFISI 184
P T F P F L+ S+ Y+ + + TF+N T+ + E +
Sbjct: 104 VQP-GQHTTLAYRFVPDALLDPRQFGLLISMDYQNELQNFTQTFFNSTVLITEKPSTFDL 162
Query: 185 ESVFLVTLGIALLVLFGLWIHGQVKQLSK--KTKKAPKVEVGTGTTDASMDEWLQGTAYT 242
E FL+ + ++ L + G++ + K K + + +WL+GT+ T
Sbjct: 163 EQFFLILFAVGIVGLVVFLVQGKLPKSKKPRSNKSTSSTSSSSVVSSDDTSDWLEGTSAT 222
Query: 243 Q-SLSSK-----SKKKK 253
LS+K +KK+K
Sbjct: 223 SPKLSAKKAPSANKKEK 239
>gi|27694932|gb|AAH43867.1| Ssr1 protein, partial [Xenopus laevis]
Length = 293
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 98/220 (44%), Gaps = 11/220 (5%)
Query: 41 DLGIVGEDAQDFGDGTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVI 100
DL E+ +D G + DT +F K A + + LVG N G + +
Sbjct: 68 DLTEEKEEEEDLSSGEPKASLNADTTILFVK--GEDFPANDIVKFLVGFTNKGPENFIIE 125
Query: 101 AIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY 157
++ AS P D+ +QN T N VP QATF F +P F LV ++ Y
Sbjct: 126 SLDASFRYPQDYQFYIQNFTALPL-NTVVPPQKQATFEYSFIPAEPMGGRPFGLVINLNY 184
Query: 158 -EVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTK 216
+ + + +Q +N T+ ++E + E++F+ L +L + +H Q+ + K+ +
Sbjct: 185 KDANGNAFQDAVFNQTVTIIEKEDGLDGETIFMYLFLGGLGLLVVVGLH-QLLESRKRKR 243
Query: 217 KAPKVEVGTGTTDASMDEWLQGTAYTQ---SLSSKSKKKK 253
A KVE+GT + W+ +Q + +S +K+
Sbjct: 244 PAQKVEMGTSNQNDVDMSWIPPETLSQINKASPRRSPRKR 283
>gi|332376623|gb|AEE63451.1| unknown [Dendroctonus ponderosae]
Length = 287
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 120/276 (43%), Gaps = 36/276 (13%)
Query: 3 MKNFRVFFFALLLLASPLLQVAKCQS---------DSETGVAETEGGDLGIVGEDAQDFG 53
MK F F F+LL+L + + V + D E E E D + + ++
Sbjct: 1 MKYF--FLFSLLVLPAVIFMVDSGKMVAFAEEDPIDEEEADVEGEVEDGDLTATEPEEEE 58
Query: 54 DGTLSPAPG-VDTVCIFPKNSA-----RVVAAGEETELLVGMKNDGESSVNVIAIQASVH 107
D +LS A DTV +F K S + G E LVG +N G V I+AS
Sbjct: 59 DESLSKASSDADTVLLFTKPSTFGASQLELVGGAPVEFLVGFRNKGLQDFVVEYIEASFR 118
Query: 108 LPFDHSLLVQNLTGQAFNNATVPVSAQATFPIHFC-----CQQPGTFDLVGSIVY-EVDQ 161
P D + +QN + +N+ P S ++TF F +P F L ++ Y +
Sbjct: 119 YPMDFNYYIQNFSAVGYNSIVKP-SEESTFQYTFVPSVGFAGRP--FGLHINLAYHDAAG 175
Query: 162 HPYQSTFYNGTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLS----KKTKK 217
+ +Q +N T++++E E+ FL A +VL L + GQ LS + KK
Sbjct: 176 NGFQEAVFNETVQIIELDEGFDGETFFLYVFLAASVVL--LLVIGQQTLLSVGKKRPAKK 233
Query: 218 APKVEVGTGTTDASMDEWLQGTAYTQSLSSKSKKKK 253
A VE GT + +WL Q+L+S +K +K
Sbjct: 234 ATPVETGTNNPNNVDYDWLPA----QTLASLNKLQK 265
>gi|410958543|ref|XP_003985877.1| PREDICTED: translocon-associated protein subunit alpha [Felis
catus]
Length = 290
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 86/188 (45%), Gaps = 8/188 (4%)
Query: 55 GTLSPAPGVDTVCIFPKN--SARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDH 112
G +P DT +F K + + ++ + LVG N G V ++ AS P D+
Sbjct: 75 GEPEASPSADTTILFVKGEGNREIFSSNNIVKFLVGFTNKGTEDFIVESLDASFRYPQDY 134
Query: 113 SLLVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTF 168
+QN T N VP QATF F +P F LV ++ Y +++ + +Q
Sbjct: 135 QFYIQNFTALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAV 193
Query: 169 YNGTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTT 228
+N T+ ++E + E++F+ +A L L + Q+ + K+ + KVE+GT +
Sbjct: 194 FNQTVTIIEREDGLDGETIFMYMF-LAGLGLLVVVGLHQLLESRKRKRPIQKVEMGTSSQ 252
Query: 229 DASMDEWL 236
+ W+
Sbjct: 253 NDVDMSWI 260
>gi|449270079|gb|EMC80803.1| Translocon-associated protein subunit alpha, partial [Columba
livia]
Length = 262
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 8/186 (4%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G +P DT +F K A + LVG N G + ++ AS P D+
Sbjct: 51 GEPKASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIIESLDASFRYPQDYQF 108
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYN 170
+QN T N VP QATF F +P F LV ++ Y +V+ + +Q +N
Sbjct: 109 YIQNFTALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYRDVNGNVFQDAVFN 167
Query: 171 GTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDA 230
T+ ++E + E++F+ +A L L + Q+ + K+ + KVE+GT +
Sbjct: 168 QTVTIIEKEDGLDGETIFMYMF-LAGLGLLVVVGLHQLLESRKRKRPVQKVEMGTSNQND 226
Query: 231 SMDEWL 236
W+
Sbjct: 227 VDMSWI 232
>gi|340719343|ref|XP_003398114.1| PREDICTED: translocon-associated protein subunit alpha-like [Bombus
terrestris]
Length = 418
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 112/256 (43%), Gaps = 26/256 (10%)
Query: 1 MEMKNFRVFFFALLLLASPLL----QVAKCQSDSETGVAETEGGDLGIVGEDAQDFGDGT 56
ME ++ F LLL S + +V + ++ + + EG D ++ ++ + D T
Sbjct: 139 MEEHRWKNLAFFLLLFISAITFTTNKVYAQEDENIDDIVDIEGEDNSVITDEEPE--DET 196
Query: 57 LSPAPGVDTVCIFPKN-----SARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFD 111
++ + DT+ +F K S + AG E LVG N GES + ++ AS +
Sbjct: 197 ITASSDADTIILFTKPVNNGLSTLELPAGNIVEFLVGFTNKGESDFILQSLDASFRYSME 256
Query: 112 HSLLVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQST 167
+ +QN + +N P +AT F + F L ++ Y + + +
Sbjct: 257 FNFYIQNFSTAVYNKIVKP-KHEATLAYSFIPSENLVGRPFGLNINLNYKDSNGIDFSEA 315
Query: 168 FYNGTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQ-------VKQLSKKTKKAPK 220
YN T++++ES + E++FL A ++L + GQ K S T++ P
Sbjct: 316 VYNETVQIIESDDGLDGETIFLYAFLAACVIL--TLVGGQQLLSSLGRKSRSSNTRRTP- 372
Query: 221 VEVGTGTTDASMDEWL 236
VE+GT + +WL
Sbjct: 373 VEMGTSNPNNVDYDWL 388
>gi|74227801|dbj|BAE35725.1| unnamed protein product [Mus musculus]
Length = 286
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 8/197 (4%)
Query: 60 APGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNL 119
+P DT +F K A + LVG N G V ++ AS P D+ +QN
Sbjct: 80 SPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQFYIQNF 137
Query: 120 TGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYNGTIEV 175
T N VP QATF F +P F LV ++ Y +++ + +Q +N T+ V
Sbjct: 138 TALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTV 196
Query: 176 VESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEW 235
+E + E++F+ +A L L + Q+ + K+ + KVE+GT + + W
Sbjct: 197 IEREDGLDGETIFMYMF-LAGLGLLVVVGLHQLLESRKRKRPIQKVEMGTSSQNDVDMSW 255
Query: 236 LQGTAYTQSLSSKSKKK 252
+ Q + +++
Sbjct: 256 IPQETLNQINKASPRRQ 272
>gi|165377206|ref|NP_080241.3| translocon-associated protein subunit alpha precursor [Mus
musculus]
gi|71162388|sp|Q9CY50.1|SSRA_MOUSE RecName: Full=Translocon-associated protein subunit alpha;
Short=TRAP-alpha; AltName: Full=Signal sequence receptor
subunit alpha; Short=SSR-alpha; Flags: Precursor
gi|12846635|dbj|BAB27245.1| unnamed protein product [Mus musculus]
gi|15030026|gb|AAH11255.1| Signal sequence receptor, alpha [Mus musculus]
gi|74147485|dbj|BAE38650.1| unnamed protein product [Mus musculus]
gi|74198700|dbj|BAE39823.1| unnamed protein product [Mus musculus]
Length = 286
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 8/197 (4%)
Query: 60 APGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNL 119
+P DT +F K A + LVG N G V ++ AS P D+ +QN
Sbjct: 80 SPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQFYIQNF 137
Query: 120 TGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYNGTIEV 175
T N VP QATF F +P F LV ++ Y +++ + +Q +N T+ V
Sbjct: 138 TALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTV 196
Query: 176 VESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEW 235
+E + E++F+ +A L L + Q+ + K+ + KVE+GT + + W
Sbjct: 197 IEREDGLDGETIFMYMF-LAGLGLLVVVGLHQLLESRKRKRPIQKVEMGTSSQNDVDMSW 255
Query: 236 LQGTAYTQSLSSKSKKK 252
+ Q + +++
Sbjct: 256 IPQETLNQINKASPRRQ 272
>gi|297632426|ref|NP_001172096.1| signal sequence receptor, alpha [Sus scrofa]
Length = 286
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 82/181 (45%), Gaps = 8/181 (4%)
Query: 60 APGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNL 119
+P DT +F K A + LVG N G V ++ AS P D+ +QN
Sbjct: 80 SPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQFYIQNF 137
Query: 120 TGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYNGTIEV 175
T N VP QATF F +P F LV ++ Y +++ + +Q +N T+ +
Sbjct: 138 TALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTI 196
Query: 176 VESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEW 235
+E + E++F+ L +L + +H Q+ + K+ + KVE GT + + W
Sbjct: 197 IEREDGLDGETIFMYMFLAGLGLLLVVGLH-QLLESRKRKRPIQKVETGTSSQNDVDMSW 255
Query: 236 L 236
+
Sbjct: 256 I 256
>gi|281353201|gb|EFB28785.1| hypothetical protein PANDA_003030 [Ailuropoda melanoleuca]
Length = 203
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 83/186 (44%), Gaps = 8/186 (4%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G +P DT +F K A + LVG N G V ++ AS P D+
Sbjct: 10 GEPEASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQF 67
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYN 170
+QN T N VP QATF F +P F LV ++ Y +++ + +Q +N
Sbjct: 68 YIQNFTALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFN 126
Query: 171 GTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDA 230
T+ ++E + E++F+ +A L L + Q+ + K+ + KVE+GT + +
Sbjct: 127 QTVTIIEREDGLDGETIFMYMF-LAGLGLLVVVGLHQLLESRKRKRPIQKVEMGTSSQND 185
Query: 231 SMDEWL 236
W+
Sbjct: 186 VDMSWI 191
>gi|335773391|gb|AEH58378.1| translocon-associated protein subunit alph-like protein, partial
[Equus caballus]
Length = 256
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 83/186 (44%), Gaps = 8/186 (4%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G +P DT +F K A + LVG N G V ++ AS P D+
Sbjct: 45 GEPEASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQF 102
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYN 170
+QN T N VP QATF F +P F LV ++ Y +++ + +Q +N
Sbjct: 103 YIQNFTALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFN 161
Query: 171 GTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDA 230
T+ ++E + E++F+ +A L L + Q+ + K+ + KVE+GT + +
Sbjct: 162 QTVTIIEREDGLDGETIFMYMF-LAGLGLLVVVGLHQLLESRKRKRPIQKVEMGTASQND 220
Query: 231 SMDEWL 236
W+
Sbjct: 221 VDMSWI 226
>gi|77993298|ref|NP_001008891.2| translocon-associated protein subunit alpha precursor [Rattus
norvegicus]
gi|66911810|gb|AAH98008.1| Signal sequence receptor, alpha [Rattus norvegicus]
gi|149045180|gb|EDL98266.1| signal sequence receptor, alpha [Rattus norvegicus]
Length = 287
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 15/205 (7%)
Query: 60 APGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNL 119
+P DT +F K A + LVG N G V ++ AS P D+ +QN
Sbjct: 81 SPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQFYIQNF 138
Query: 120 TGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYNGTIEV 175
T N VP QATF F +P F LV ++ Y +++ + +Q +N T+ V
Sbjct: 139 TALPL-NTIVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTV 197
Query: 176 VESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEW 235
+E + E++F+ +A L L + Q+ + K+ + KVE+GT + + W
Sbjct: 198 IEREDGLDGETIFMYMF-LAGLGLLVVVGLHQLLESRKRKRPIQKVEMGTSSQNDVDMSW 256
Query: 236 LQ-------GTAYTQSLSSKSKKKK 253
+ A + L K +K+
Sbjct: 257 IPQETLNQINKASPRRLPRKRAQKR 281
>gi|15042703|gb|AAK82421.1|AF395811_1 translocon-associated protein alpha [Mus musculus]
gi|14548366|gb|AAK16151.2| translocon-associated protein alpha [Mus musculus]
Length = 286
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 8/197 (4%)
Query: 60 APGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNL 119
+P DT +F K A + LVG N G V ++ AS P D+ +QN
Sbjct: 80 SPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQFYIQNF 137
Query: 120 TGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYNGTIEV 175
T N VP QATF F +P F LV ++ Y +++ + +Q +N T+ V
Sbjct: 138 TALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTV 196
Query: 176 VESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEW 235
+E + E++F+ +A L L + Q+ + K+ + KVE+GT + + W
Sbjct: 197 IEREDGLDGETIFMYMF-LAGLGLLVVVGLHQLLESRKRKRPIQKVEMGTSSQNDVDMSW 255
Query: 236 LQGTAYTQSLSSKSKKK 252
+ Q + +++
Sbjct: 256 IPQETLNQINKASPRRQ 272
>gi|148708984|gb|EDL40930.1| signal sequence receptor, alpha [Mus musculus]
Length = 260
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 8/197 (4%)
Query: 60 APGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNL 119
+P DT +F K A + LVG N G V ++ AS P D+ +QN
Sbjct: 54 SPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQFYIQNF 111
Query: 120 TGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYNGTIEV 175
T N VP QATF F +P F LV ++ Y +++ + +Q +N T+ V
Sbjct: 112 TALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTV 170
Query: 176 VESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEW 235
+E + E++F+ +A L L + Q+ + K+ + KVE+GT + + W
Sbjct: 171 IEREDGLDGETIFMYMF-LAGLGLLVVVGLHQLLESRKRKRPIQKVEMGTSSQNDVDMSW 229
Query: 236 LQGTAYTQSLSSKSKKK 252
+ Q + +++
Sbjct: 230 IPQETLNQINKASPRRQ 246
>gi|417398480|gb|JAA46273.1| Putative signal sequence receptor alpha [Desmodus rotundus]
Length = 293
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 83/186 (44%), Gaps = 8/186 (4%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G +P DT +F K A + LVG N G V ++ AS P D+
Sbjct: 75 GEPEASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQF 132
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYN 170
+QN T N VP QATF F +P F LV ++ Y +++ + +Q +N
Sbjct: 133 YIQNFTALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFN 191
Query: 171 GTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDA 230
T+ ++E + E++F+ +A L L + Q+ + K+ + KVE+GT + +
Sbjct: 192 QTVTIIEREDGLDGETIFMYMF-LAGLGLLVVVGLHQLLESRKRKRPIQKVEMGTASQND 250
Query: 231 SMDEWL 236
W+
Sbjct: 251 VDMSWI 256
>gi|426251402|ref|XP_004019412.1| PREDICTED: cancer-associated gene 1 protein homolog [Ovis aries]
Length = 1090
Score = 60.8 bits (146), Expect = 5e-07, Method: Composition-based stats.
Identities = 54/204 (26%), Positives = 90/204 (44%), Gaps = 9/204 (4%)
Query: 45 VGEDAQDFG-DGTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQ 103
+ ED ++ G G +P DT +F K A + LVG N G V ++
Sbjct: 881 LAEDKEEDGVSGEPEASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLD 938
Query: 104 ASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EV 159
AS P D+ +QN T N VP QATF F +P F LV ++ Y ++
Sbjct: 939 ASFRYPQDYQFYIQNFTALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDL 997
Query: 160 DQHPYQSTFYNGTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAP 219
+ + +Q +N T+ ++E + E++F+ +A L L + Q+ + K+ +
Sbjct: 998 NGNVFQDAVFNQTVTIIEREDGLDGETIFMYMF-LAGLGLLVVVGLHQLLESRKRKRPIQ 1056
Query: 220 KVEVGTGTTDASMDEWLQGTAYTQ 243
KVE+GT + + W+ Q
Sbjct: 1057 KVEMGTSSQNDVDMSWIPQETLNQ 1080
>gi|196003314|ref|XP_002111524.1| hypothetical protein TRIADDRAFT_63858 [Trichoplax adhaerens]
gi|190585423|gb|EDV25491.1| hypothetical protein TRIADDRAFT_63858 [Trichoplax adhaerens]
Length = 292
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 82/176 (46%), Gaps = 17/176 (9%)
Query: 63 VDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQ 122
+T +F N + + G ++ L+G N GE V +I+ SV P D++ +QN T
Sbjct: 104 AETNILFTTNDVQALPTGTLSKCLIGFSNIGELDFIVDSIEGSVRYPADYNYFIQNTT-- 161
Query: 123 AFNNATVPVSAQATFPIHFCCQQPGTFDLVGSIVY-EVDQHPYQSTFYNGTIEVVESGGF 181
F A P + A+ P F LV ++ Y + D + +Q+ YN T+ VE
Sbjct: 162 -FYYAFAPHDSLASRP----------FGLVFTVSYRDADGNTFQTVLYNDTVTFVEGKSG 210
Query: 182 ISIESVFL-VTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEWL 236
+ E VF+ V L ++ L V ++SKK+ K P E GT D M EW+
Sbjct: 211 VDGEMVFMYVFLAACAALVVLLVRQLVVARMSKKSAK-PTFETGTQNADIDM-EWI 264
>gi|301758456|ref|XP_002915076.1| PREDICTED: translocon-associated protein subunit alpha-like
[Ailuropoda melanoleuca]
Length = 286
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 8/193 (4%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G +P DT +F K A + LVG N G V ++ AS P D+
Sbjct: 75 GEPEASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQF 132
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYN 170
+QN T N VP QATF F +P F LV ++ Y +++ + +Q +N
Sbjct: 133 YIQNFTALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFN 191
Query: 171 GTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDA 230
T+ ++E + E++F+ +A L L + Q+ + K+ + KVE+GT + +
Sbjct: 192 QTVTIIEREDGLDGETIFMYMF-LAGLGLLVVVGLHQLLESRKRKRPIQKVEMGTSSQND 250
Query: 231 SMDEWLQGTAYTQ 243
W+ Q
Sbjct: 251 VDMSWIPQETLNQ 263
>gi|156120891|ref|NP_001095592.1| translocon-associated protein subunit alpha precursor [Bos taurus]
gi|187611488|sp|A6QLP7.1|SSRA_BOVIN RecName: Full=Translocon-associated protein subunit alpha;
Short=TRAP-alpha; AltName: Full=Signal sequence receptor
subunit alpha; Short=SSR-alpha; Flags: Precursor
gi|151553610|gb|AAI48042.1| SSR1 protein [Bos taurus]
gi|296473982|tpg|DAA16097.1| TPA: translocon-associated protein subunit alpha precursor [Bos
taurus]
Length = 286
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 8/193 (4%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G +P DT +F K A + LVG N G V ++ AS P D+
Sbjct: 75 GEPEASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQF 132
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYN 170
+QN T N VP QATF F +P F LV ++ Y +++ + +Q +N
Sbjct: 133 YIQNFTALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFN 191
Query: 171 GTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDA 230
T+ ++E + E++F+ +A L L + Q+ + K+ + KVE+GT + +
Sbjct: 192 QTVTIIEREDGLDGETIFMYMF-LAGLGLLVVVGLHQLLESRKRKRPIQKVEMGTSSQND 250
Query: 231 SMDEWLQGTAYTQ 243
W+ Q
Sbjct: 251 VDMSWIPQETLNQ 263
>gi|17510497|ref|NP_491076.1| Protein TRAP-1 [Caenorhabditis elegans]
gi|351051448|emb|CCD73517.1| Protein TRAP-1 [Caenorhabditis elegans]
Length = 257
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 77/174 (44%), Gaps = 7/174 (4%)
Query: 72 NSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVPV 131
N R G+ + L+G +N GE V + S P DHS +QN T +N P
Sbjct: 62 NVVREFYTGKPVKYLIGFQNKGEKDFVVKYAETSFRFPTDHSYHLQNFTRGEYNRRVAP- 120
Query: 132 SAQATFPIHFCCQQPGTFDLVGSIV----YEVDQHPYQSTFYNGTIEVVESGGFISIESV 187
+ T F + VG +V + D + + + YN TI ++E S E+
Sbjct: 121 KEEVTLDYGFYAHETFAGRPVGLVVNVHYQDADGNVFVNNVYNQTINIMEDDSGFSGETG 180
Query: 188 FLVTLGIALLVLFGLWIHGQ-VKQLSKKTKKAPKVEVGTGTTDASMDEWLQGTA 240
FL +AL + GL++ Q + +LS+K+ + + V GT+ EW+ A
Sbjct: 181 FLFIFFVALSIG-GLYLSNQFLSKLSRKSGLSKRRVVEQGTSSEVDFEWIPRDA 233
>gi|393911572|gb|EFO25612.2| hypothetical protein LOAG_02868 [Loa loa]
Length = 308
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 13/206 (6%)
Query: 54 DGTLSPAPGVDTVCIF--PKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFD 111
D + P+P + IF P+NS + G+ + L+G +N GE V + S P D
Sbjct: 91 DNIMGPSPDIHVAFIFIRPENSEDL-PGGKLVQFLIGFQNRGEKDFTVHYCETSFRYPQD 149
Query: 112 HSLLVQNLTGQAFNNATVPVSAQATFPIHF--CCQQPGT-FDLVGSIVYE-VDQHPYQST 167
S +QN + +N V + +F F Q G LV + YE D Y++T
Sbjct: 150 FSYHIQNFSRVQYNRV-VAAKQETSFNYAFYPSDQFAGRPLGLVVELQYEDSDGKAYKNT 208
Query: 168 FYNGTIEVVESGGFISIESVFLVTL---GIALLVLFGLWIHGQV--KQLSKKTKKAPKVE 222
+N T+ +VE + E+ FL + G+ L++L G ++ K K+++ +E
Sbjct: 209 VFNETVTIVEDESNFNTETGFLYVIFAAGVLLILLAGQHFLSKLTRKHGMAKSRQIQSIE 268
Query: 223 VGTGTTDASMDEWLQGTAYTQSLSSK 248
+GT + + EW+ S K
Sbjct: 269 IGTSSKNEVDFEWIPREVLNHKKSPK 294
>gi|431913320|gb|ELK14998.1| Translocon-associated protein subunit alpha [Pteropus alecto]
Length = 293
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 83/186 (44%), Gaps = 8/186 (4%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G +P DT +F K A + LVG N G V ++ AS P D+
Sbjct: 75 GEPEASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQF 132
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYN 170
+QN T N VP QATF F +P F LV ++ Y +++ + +Q +N
Sbjct: 133 YIQNFTALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFN 191
Query: 171 GTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDA 230
T+ ++E + E++F+ +A L L + Q+ + K+ + KVE+GT + +
Sbjct: 192 QTVTIIEREDGLDGETIFMYMF-LAGLGLLVVVGLHQLLESRKRKRPIQKVEMGTSSQND 250
Query: 231 SMDEWL 236
W+
Sbjct: 251 VDMSWI 256
>gi|50979076|ref|NP_001003270.1| translocon-associated protein subunit alpha precursor [Canis lupus
familiaris]
gi|134930|sp|P16967.1|SSRA_CANFA RecName: Full=Translocon-associated protein subunit alpha;
Short=TRAP-alpha; AltName: Full=PGP35; AltName:
Full=Signal sequence receptor subunit alpha;
Short=SSR-alpha; Flags: Precursor
gi|935|emb|CAA35752.1| unnamed protein product [Canis lupus familiaris]
Length = 286
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 83/186 (44%), Gaps = 8/186 (4%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G +P DT +F K A + LVG N G V ++ AS P D+
Sbjct: 75 GEPEASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQF 132
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYN 170
+QN T N VP QATF F +P F LV ++ Y +++ + +Q +N
Sbjct: 133 YIQNFTALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFN 191
Query: 171 GTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDA 230
T+ ++E + E++F+ +A L L + Q+ + K+ + KVE+GT + +
Sbjct: 192 QTVTIIEREDGLDGETIFMYMF-LAGLGLLVVVGLHQLLESRKRKRPIQKVEMGTSSQND 250
Query: 231 SMDEWL 236
W+
Sbjct: 251 VDMSWI 256
>gi|71162390|sp|Q7TPJ0.1|SSRA_RAT RecName: Full=Translocon-associated protein subunit alpha;
Short=TRAP-alpha; AltName: Full=Liver
regeneration-related protein LRRG137; AltName:
Full=Signal sequence receptor subunit alpha;
Short=SSR-alpha; Flags: Precursor
gi|32527751|gb|AAP86277.1| Ac2-238 [Rattus norvegicus]
Length = 319
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 86/195 (44%), Gaps = 8/195 (4%)
Query: 60 APGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNL 119
+P DT +F K A + LVG N G V ++ AS P D+ +QN
Sbjct: 81 SPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQFYIQNF 138
Query: 120 TGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYNGTIEV 175
T N VP QATF F +P F LV ++ Y +++ + +Q +N T+ V
Sbjct: 139 TALPL-NTIVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTV 197
Query: 176 VESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEW 235
+E + E++F+ +A L L + Q+ + K+ + KVE+GT + + W
Sbjct: 198 IEREDGLDGETIFMYMF-LAGLGLLVVVGLHQLLESRKRKRPIQKVEMGTSSQNDVDMSW 256
Query: 236 LQGTAYTQSLSSKSK 250
+ Q + + +
Sbjct: 257 IPQETLNQISAGRER 271
>gi|221090670|ref|XP_002161252.1| PREDICTED: translocon-associated protein subunit alpha-like [Hydra
magnipapillata]
Length = 295
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 115/256 (44%), Gaps = 24/256 (9%)
Query: 19 PLLQVAKCQSDSETGVAETEGGDLGI---------VGEDAQDFGDGT--LSPAPGVDTVC 67
P+ + A +D E E + D+ + G+DA++ L +P TV
Sbjct: 32 PVDEEAATAADDEEVTTEEDTSDVKVEPEPETTAPTGKDAEEEEKQPQGLRISPDASTVV 91
Query: 68 IFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNA 127
+FP + + AG+ +LVG N GE + ++ AS P D+S +QN TG A+N
Sbjct: 92 LFPDFPEKQLPAGQPIYVLVGFHNKGEKDFIIESLDASFRYPQDYSYYIQNFTGTAYNTL 151
Query: 128 TVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYNGTIEVVESGGFIS 183
P +A+F F + F L ++Y + D + Y + +N T+ E
Sbjct: 152 VKP-GEEASFKYGFHPHESYGGRPFGLTIMMLYKDSDGNQYGAGVFNETVTFHELEENFD 210
Query: 184 IESVF--LVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGT--GTTDASMDEWL--Q 237
E+ F ++ + + LLV+FG+ K++++A E GT G TD D WL +
Sbjct: 211 GETFFLYVLLVAVGLLVIFGINYAFNKSGFKKQSRQA-ATETGTQNGRTDIDYD-WLPKE 268
Query: 238 GTAYTQSLSSKSKKKK 253
A+ + +S K++
Sbjct: 269 AAAFNKPSPRQSPKRR 284
>gi|312071103|ref|XP_003138453.1| hypothetical protein LOAG_02868 [Loa loa]
Length = 303
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 13/206 (6%)
Query: 54 DGTLSPAPGVDTVCIF--PKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFD 111
D + P+P + IF P+NS + G+ + L+G +N GE V + S P D
Sbjct: 86 DNIMGPSPDIHVAFIFIRPENSEDL-PGGKLVQFLIGFQNRGEKDFTVHYCETSFRYPQD 144
Query: 112 HSLLVQNLTGQAFNNATVPVSAQATFPIHF--CCQQPGT-FDLVGSIVYE-VDQHPYQST 167
S +QN + +N V + +F F Q G LV + YE D Y++T
Sbjct: 145 FSYHIQNFSRVQYNRV-VAAKQETSFNYAFYPSDQFAGRPLGLVVELQYEDSDGKAYKNT 203
Query: 168 FYNGTIEVVESGGFISIESVFLVTL---GIALLVLFGLWIHGQV--KQLSKKTKKAPKVE 222
+N T+ +VE + E+ FL + G+ L++L G ++ K K+++ +E
Sbjct: 204 VFNETVTIVEDESNFNTETGFLYVIFAAGVLLILLAGQHFLSKLTRKHGMAKSRQIQSIE 263
Query: 223 VGTGTTDASMDEWLQGTAYTQSLSSK 248
+GT + + EW+ S K
Sbjct: 264 IGTSSKNEVDFEWIPREVLNHKKSPK 289
>gi|224284522|gb|ACN39994.1| unknown [Picea sitchensis]
Length = 69
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Query: 23 VAKCQSDSETGV--AETEGGDLGIVGEDAQDFGDGTLSPAPGVDTVCIFPKN 72
V CQ S T V A+ EGG+LGIVG+ QDFGD L APGVDTVC FPK
Sbjct: 17 VGICQVASSTEVVDAQDEGGELGIVGDGVQDFGDAVLGTAPGVDTVCFFPKK 68
>gi|170593205|ref|XP_001901355.1| translocon-associated protein alpha [Brugia malayi]
gi|158591422|gb|EDP30035.1| translocon-associated protein alpha, putative [Brugia malayi]
Length = 254
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 13/207 (6%)
Query: 54 DGTLSPAPGVDTVCIF--PKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFD 111
D + P+ V IF P++S + G+ + L+G +N GE V+ + S P D
Sbjct: 37 DNVMKPSADVHVAFIFTHPEHSEGL-PGGKLVQFLMGFQNHGEKEFTVLFCETSFRYPQD 95
Query: 112 HSLLVQNLTGQAFNNATVPVSAQATFPIHF--CCQQPGT-FDLVGSIVYE-VDQHPYQST 167
S +QN + +N V +ATF F Q G LV + YE D Y++T
Sbjct: 96 FSYHIQNFSRVQYNRV-VAAKQEATFNYAFYPSDQFAGRPLGLVVELQYEDSDGKGYKNT 154
Query: 168 FYNGTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSK-----KTKKAPKVE 222
+N T+ +VE + E+ FL + A++VL L + +L++ K+++ E
Sbjct: 155 VFNETVTIVEDESNFNTETGFLYVIFAAVVVLILLAGQHFLSKLTRRHGMAKSRQTQLTE 214
Query: 223 VGTGTTDASMDEWLQGTAYTQSLSSKS 249
+GT + EW+ + S KS
Sbjct: 215 IGTSKKNEVDFEWIPREVLNHNKSPKS 241
>gi|41151978|ref|NP_958484.1| translocon-associated protein subunit alpha precursor [Danio rerio]
gi|27461259|gb|AAM49799.1| translocon-associated protein alpha [Danio rerio]
gi|33604136|gb|AAH56339.1| Signal sequence receptor, alpha [Danio rerio]
Length = 290
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 11/206 (5%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G + +P DT +F K A + L+G N G + V ++ AS P D
Sbjct: 79 GEVKASPNADTTILFVKGED--FPANNIVKFLLGFSNKGSENFVVESLDASFRYPQDFQF 136
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVYEVDQ-HPYQSTFYN 170
+QN T VP QATF F +P F LV ++ Y D + +Q +N
Sbjct: 137 YIQNFTALQL-GTLVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYRDDSGNVFQDAVFN 195
Query: 171 GTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDA 230
T+ + E + E++F+ L +L + +H Q+ + K+ + A KVE+GT +
Sbjct: 196 QTVTITEREDGLDGETIFMYVFLSGLGLLLVIGLH-QLLESRKRRRPAAKVEMGTSNHND 254
Query: 231 SMDEWLQGTAYTQ---SLSSKSKKKK 253
W+ Q + +S +K+
Sbjct: 255 VDMSWIPQETLNQINKASPRRSPRKR 280
>gi|223648636|gb|ACN11076.1| Translocon-associated protein subunit alpha precursor [Salmo salar]
Length = 293
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 89/201 (44%), Gaps = 8/201 (3%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G ++ +P DT +F K A + + L+G N G + V ++ AS P D
Sbjct: 82 GEVNASPNADTTILFVKGDD--FPANDIVKFLMGFTNKGSDNFVVESLDASFRYPQDFQF 139
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYN 170
+QN T VP QATF F +P F LV ++ Y + + + +Q +N
Sbjct: 140 YIQNFTALQL-GIVVPAGRQATFEYSFIPAEPMGGRPFGLVINLNYKDSNGNTFQDAVFN 198
Query: 171 GTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDA 230
T+ + E + E++F+ L +L + +H Q+ + K+ + A KVE+GT + +
Sbjct: 199 QTVTITEREDGLDGETIFMYVFLSGLGLLLVVGLH-QLLESRKRRRPAAKVEMGTSSHND 257
Query: 231 SMDEWLQGTAYTQSLSSKSKK 251
W+ Q + K+
Sbjct: 258 VDMSWIPQETLNQINKASPKR 278
>gi|354479718|ref|XP_003502056.1| PREDICTED: translocon-associated protein subunit alpha-like
[Cricetulus griseus]
Length = 383
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 83/186 (44%), Gaps = 8/186 (4%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G +P DT +F K A + LVG N G V ++ AS P D+
Sbjct: 172 GEPEASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQF 229
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYN 170
+QN T N VP QATF F +P F LV ++ Y +++ + +Q +N
Sbjct: 230 YIQNFTALPL-NTIVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFN 288
Query: 171 GTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDA 230
T+ V+E + E++F+ +A L L + Q+ + K+ + KVE+GT + +
Sbjct: 289 QTVTVIEREDGLDGETIFMYMF-LAGLGLLVVVGLHQLLESRKRKRPIQKVEMGTSSQND 347
Query: 231 SMDEWL 236
W+
Sbjct: 348 VDMSWI 353
>gi|119575608|gb|EAW55204.1| signal sequence receptor, alpha (translocon-associated protein
alpha), isoform CRA_c [Homo sapiens]
Length = 278
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 70/154 (45%), Gaps = 9/154 (5%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G +P DT +F K A + LVG N G V ++ AS P D+
Sbjct: 75 GEPEASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQF 132
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYN 170
+QN T N VP QATF F +P F LV ++ Y +++ + +Q +N
Sbjct: 133 YIQNFTALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFN 191
Query: 171 GTIEVVESGGFISIESVFLVTL--GIALLVLFGL 202
T+ V+E + E++F+ G+ LLV+ GL
Sbjct: 192 QTVTVIEREDGLDGETIFMYMFLAGLGLLVIVGL 225
>gi|91079082|ref|XP_975256.1| PREDICTED: similar to translocon-associated protein subunit alpha
[Tribolium castaneum]
gi|270004205|gb|EFA00653.1| hypothetical protein TcasGA2_TC003529 [Tribolium castaneum]
Length = 287
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 114/275 (41%), Gaps = 45/275 (16%)
Query: 9 FFFALLLLASP---------LLQVAKCQSDSETGVAETEG-GDLGIVGE-DAQDFGDGTL 57
+FF + LL P L VA + D E EG D+ V DA+D D
Sbjct: 3 YFFLISLLVFPAVIFTLDNGLKMVAHAEEDPLEDEVEVEGEADVEEVAPTDAEDEEDSEK 62
Query: 58 SPA-PGVDTVCIFPKNSARV----VAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDH 112
+ A P DT +F + A + AG E LVG +N G+ + +++AS P D
Sbjct: 63 TTASPDADTTLLFVRPIATASQLELPAGVPVEFLVGFRNKGKEDFVLESLEASFRYPMDF 122
Query: 113 SLLVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTF 168
+ +QN + ++ P +AT F + F L ++ Y + + +Q
Sbjct: 123 NFYIQNFSAIGYSKVVQP-EQEATLAYSFIPSEAFAGRPFGLNINLAYRDASGNSFQEAV 181
Query: 169 YNGTIEVVESGGFISIESVFLV-----------TLGIALLVLFGLWIHGQVKQLSKKTKK 217
YN T++++E + E+ FL +G L+ FG + T+K
Sbjct: 182 YNETVQIIELEEGLDGETFFLYVFLVAGVVLLLVIGQQTLLSFG---------KKRITRK 232
Query: 218 APKVEVGTGTTDASMDEWLQGTAYTQSLSSKSKKK 252
A VE GT + +WL Q+L++ +K+K
Sbjct: 233 AAPVETGTSNPNNVDYDWLP----KQTLATLNKEK 263
>gi|344292394|ref|XP_003417913.1| PREDICTED: translocon-associated protein subunit alpha-like
[Loxodonta africana]
Length = 286
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 8/186 (4%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G +P DT +F K A + LVG N G V ++ AS P D+
Sbjct: 75 GEPEASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFVVESLDASFRYPQDYQF 132
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYN 170
+QN T N VP QATF F +P F LV ++ Y ++ + +Q +N
Sbjct: 133 YIQNFTALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLTGNVFQDAVFN 191
Query: 171 GTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDA 230
T+ ++E + E++F+ +A L L + Q+ + K+ + KVE+GT + +
Sbjct: 192 QTVTIIEREDGLDGETIFMYMF-LAGLGLLVVVGLHQLLESRKRKRPIQKVEMGTSSQND 250
Query: 231 SMDEWL 236
W+
Sbjct: 251 VDMSWI 256
>gi|159486153|ref|XP_001701108.1| translocon-associated protein alpha subunit [Chlamydomonas
reinhardtii]
gi|158272002|gb|EDO97810.1| translocon-associated protein alpha subunit [Chlamydomonas
reinhardtii]
Length = 244
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 10/190 (5%)
Query: 57 LSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLV 116
L PA + T FP+ + AG+ +++VG++N+ N+ A+ S++ D
Sbjct: 37 LPPAGEISTGFFFPEFPTKQFIAGQPVKVVVGIRNEAAEKYNISAVMGSLNNAQDFRAYY 96
Query: 117 QNLTGQAFNNATVP---VSAQATF--PIHFCCQQPGTFDLVGSIVYEVDQHPYQSTFYNG 171
N T Q + P +S + TF P P + + ++ YE STF+N
Sbjct: 97 WNFTQQVYFQVVEPSKELSVEYTFLPPKDL---PPNDYQVALTVFYEAADGFKSSTFFNQ 153
Query: 172 TIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLS-KKTKKAPKVEVGTGTTDA 230
T+ V E I + +FL + I L+ G ++ +K + K+ K V T +
Sbjct: 154 TVSVSEKPQLIDWKLIFLYVIFIGLVAAGGYYVWTTIKDVPLVKSMVGKKKSVKTDESRT 213
Query: 231 -SMDEWLQGT 239
+ DEW+ GT
Sbjct: 214 FNNDEWVAGT 223
>gi|195134761|ref|XP_002011805.1| GI14400 [Drosophila mojavensis]
gi|193909059|gb|EDW07926.1| GI14400 [Drosophila mojavensis]
Length = 302
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 112/257 (43%), Gaps = 27/257 (10%)
Query: 3 MKNFRVFFFALLLLASPLLQ----------VAKCQSDSETGVAETEGGDLGIVGEDAQDF 52
MKN + FF LL+L + + A+ D V EG G E D
Sbjct: 1 MKN--LMFFLLLVLPTIICTFSAPNKLGAYAAEAVEDDLVDVESEEGAVTGEDAEADDDA 58
Query: 53 GDGTLSPAPGVDTVCIFPK-----NSARVVAAGEETELLVGMKNDGESSVNVIAIQASVH 107
G+ S +P DT +F K + G+ E L+G N+G+ + +++AS
Sbjct: 59 DSGSTSTSPNADTYLLFTKPLHTPGQQLDLPGGKPVEFLIGFTNNGKEEFIIESVEASFR 118
Query: 108 LPFDHSLLVQNLTGQAFNNATVP-VSAQATFPIHFCCQQPGT-FDLVGSIVY-EVDQHPY 164
P D++ +QN + A+N P + + ++ Q G F L ++ Y + + Y
Sbjct: 119 YPMDYNYFIQNFSAVAYNREVKPGIESTVSYTFMPSDQFAGRPFGLNIALAYRDANGIQY 178
Query: 165 QSTFYNGTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQL---SKKTKKAPKV 221
+N T+ + E + E+ FL L ++VL L + GQ L K+ + A K
Sbjct: 179 NEAVFNETVLISEVDEGLDGETFFLYVLLAGIVVL--LLVIGQQYLLGSSGKRKRAAAKK 236
Query: 222 EVGTGT-TDASMD-EWL 236
+ TGT D+++D +W+
Sbjct: 237 VIETGTANDSNIDYDWV 253
>gi|149731934|ref|XP_001493387.1| PREDICTED: translocon-associated protein subunit alpha-like [Equus
caballus]
Length = 352
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 83/186 (44%), Gaps = 8/186 (4%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G +P DT +F K A + LVG N G V ++ AS P D+
Sbjct: 141 GEPEASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQF 198
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYN 170
+QN T N VP QATF F +P F LV ++ Y +++ + +Q +N
Sbjct: 199 YIQNFTALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFN 257
Query: 171 GTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDA 230
T+ ++E + E++F+ +A L L + Q+ + K+ + KVE+GT + +
Sbjct: 258 QTVTIIEREDGLDGETIFMYMF-LAGLGLLVVVGLHQLLESRKRKRPIQKVEMGTASQND 316
Query: 231 SMDEWL 236
W+
Sbjct: 317 VDMSWI 322
>gi|328793593|ref|XP_623753.3| PREDICTED: translocon-associated protein subunit alpha-like [Apis
mellifera]
Length = 314
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 104/252 (41%), Gaps = 25/252 (9%)
Query: 3 MKNFRVFFFALLLLASPLLQVAKCQSDSETG-VAETEGGDLGIVGEDAQDFGDGTLSPAP 61
MK F +F + + + Q D + + EG D I+ ++ + D + +
Sbjct: 1 MKKFSIFLLVFISTITFTMNRVYAQEDENIDDIVDIEGEDNSIITDEEPE--DEITTASS 58
Query: 62 GVDTVCIFPKN-----SARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLV 116
DT +F K S + AG E LVG N GES + ++ AS + + +
Sbjct: 59 DADTTILFTKPVYNGLSTLELPAGNLVEFLVGFTNKGESDFVLESVDASFRYAMNFNFYI 118
Query: 117 QNLTGQAFNNATVP----VSAQATFPIHFCCQQPGTFDLVGSIVY-EVDQHPYQSTFYNG 171
QN + +N P A + P +P F++ ++ Y + + + YN
Sbjct: 119 QNFSTVIYNKIVKPKHEATLAYSFIPSENLAGRPFGFNI--NLNYKDANGISFNEAVYNE 176
Query: 172 TIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQ-------VKQLSKKTKKAPKVEVG 224
T++++E + E++FL A ++L + GQ K S T+K P VE+G
Sbjct: 177 TVQIIELDDGLDGETIFLYVFLAACVIL--TLVGGQQLLSSLGRKSRSSSTRKTP-VEMG 233
Query: 225 TGTTDASMDEWL 236
T + +WL
Sbjct: 234 TSNPNNVDYDWL 245
>gi|391330693|ref|XP_003739789.1| PREDICTED: translocon-associated protein subunit alpha-like
[Metaseiulus occidentalis]
Length = 241
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 113/258 (43%), Gaps = 28/258 (10%)
Query: 3 MKNFRVFFFALLLLASPLLQVAKCQSDSETGVAETEGGDLGIVGEDAQDFGDGTLSPAPG 62
MK F V F +LLL+ V+ + D T ET ED G G PG
Sbjct: 1 MKIFAVVFTSLLLVG-----VSLAEDDEATEQVETI--------EDLIPEGTG-YEKHPG 46
Query: 63 VDTVCIF--PKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLT 120
DT +F P R+V+ G+E +L+G N + + + AS L D++ ++QNL+
Sbjct: 47 ADTHILFTKPGGGYRLVS-GQEAHILLGFINRASEDLFIDTLDASFRLAGDYNSVIQNLS 105
Query: 121 GQAFNNATVPVSAQATFPIHFCCQQPGTFDLVG---SIVY-EVDQHPYQSTFYNGTIEVV 176
+N + +A+ F + VG S++Y + + Y+ +N T+ V
Sbjct: 106 AVGYNRK-LSTGQEASLFYQFHVDNVFSGMPVGLEVSLMYHDSEGKVYREAVFNSTLTVE 164
Query: 177 ESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMD-EW 235
E E+ FL A +VL + + ++ +S+ K + + E TGT D +D W
Sbjct: 165 EPEVSFDAETFFLYVFLAAAIVLGAVLL---LQCVSRNKKPSGRTE--TGTKDGDVDYAW 219
Query: 236 LQGTAYTQSLSSKSKKKK 253
L T Q +++KK
Sbjct: 220 LPSTVLKQGTPKSTRQKK 237
>gi|444731406|gb|ELW71760.1| Translocon-associated protein subunit alpha [Tupaia chinensis]
Length = 306
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 8/181 (4%)
Query: 60 APGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNL 119
+P DT +F K A + LVG N G V ++ AS P D+ +QN
Sbjct: 80 SPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQFYIQNF 137
Query: 120 TGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYNGTIEV 175
T + VP QATF F +P F LV ++ Y +++ + +Q +N T+ V
Sbjct: 138 TALPL-STVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTV 196
Query: 176 VESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEW 235
+E + E++F+ +A L L + Q+ + K+ + KVE+GT + W
Sbjct: 197 IEREDGLDGETIFMYMF-LAGLGLLVVVGLHQLLESRKRKRPIQKVEMGTSNQNDVDMSW 255
Query: 236 L 236
+
Sbjct: 256 I 256
>gi|154090971|ref|NP_001076222.1| translocon-associated protein subunit alpha precursor [Oryctolagus
cuniculus]
gi|1711549|sp|P53815.1|SSRA_RABIT RecName: Full=Translocon-associated protein subunit alpha;
Short=TRAP-alpha; AltName: Full=Signal sequence receptor
subunit alpha; Short=SSR-alpha; Flags: Precursor
gi|1256242|gb|AAA96272.1| translocon associated protein alpha [Oryctolagus cuniculus]
Length = 286
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 88/210 (41%), Gaps = 15/210 (7%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G +P DT +F K A LVG N G V ++ AS P D+
Sbjct: 75 GEPEASPSADTTILFVKGED--FPANNIVRFLVGFTNKGTEDFIVESLDASFRYPQDYQF 132
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYN 170
+QN T N VP QATF F +P F LV ++ Y + + + +Q +N
Sbjct: 133 YIQNFTALPL-NTIVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDFNGNVFQDAVFN 191
Query: 171 GTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDA 230
T+ V+E + +++F+ + +A L L + Q+ + + + KVE+GT + +
Sbjct: 192 QTVTVIEREDGLDGQTIFMY-MSLAGLGLLVVVGLHQLLESRNRKRPIQKVEMGTSSQND 250
Query: 231 SMDEWLQ-------GTAYTQSLSSKSKKKK 253
W+ A + L K +K+
Sbjct: 251 VDMSWIPQETLNQINKASPRRLPRKRPQKR 280
>gi|380023814|ref|XP_003695706.1| PREDICTED: LOW QUALITY PROTEIN: translocon-associated protein
subunit alpha-like [Apis florea]
Length = 275
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 104/252 (41%), Gaps = 25/252 (9%)
Query: 3 MKNFRVFFFALLLLASPLLQVAKCQSDSETG-VAETEGGDLGIVGEDAQDFGDGTLSPAP 61
MK F +F + + + Q D + + EG D I+ ++ + D + +
Sbjct: 1 MKKFSIFLLIFISTITFTMNRVYAQEDENIDDIVDIEGEDNSIITDEEPE--DEITTASS 58
Query: 62 GVDTVCIFPKN-----SARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLV 116
DT +F K S + AG E LVG N GES + ++ AS + + +
Sbjct: 59 DADTTILFTKPVYNGLSTLELPAGNLVEFLVGFTNKGESDFVLESVDASFRYAMNFNFYI 118
Query: 117 QNLTGQAFNNATVP----VSAQATFPIHFCCQQPGTFDLVGSIVY-EVDQHPYQSTFYNG 171
QN + +N P A + P +P F++ ++ Y + + + YN
Sbjct: 119 QNFSTVIYNKIVKPKHEATLAYSFIPSENLAGRPFGFNI--NLNYRDANGISFNEAVYNE 176
Query: 172 TIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQ-------VKQLSKKTKKAPKVEVG 224
T++++E + E++FL A ++L + GQ K S T+K P VE+G
Sbjct: 177 TVQIIELDDGLDGETIFLYVFLAACVIL--TLVGGQQLLSSLGRKSRSSSTRKTP-VEMG 233
Query: 225 TGTTDASMDEWL 236
T + +WL
Sbjct: 234 TSNPNNVDYDWL 245
>gi|350410210|ref|XP_003488981.1| PREDICTED: translocon-associated protein subunit alpha-like [Bombus
impatiens]
Length = 275
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 110/255 (43%), Gaps = 31/255 (12%)
Query: 3 MKNFRVFFFALLLLASPLL----QVAKCQSDSETGVAETEGGDLGIVGEDAQDFGDGTLS 58
M+ F +F LLL S + +V + ++ + + EG D ++ ++ + D T +
Sbjct: 1 MEKFSIF---LLLFISAITFTTNKVYAQEDENIDDIVDIEGEDNSVITDEEPE--DETTT 55
Query: 59 PAPGVDTVCIFPKN-----SARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHS 113
+ DT +F K S + AG E LVG N GES + ++ AS D +
Sbjct: 56 ASSDADTTILFTKPVYNGLSTLELPAGNLVEFLVGFTNKGESDFILESLDASFRYAMDFN 115
Query: 114 LLVQNLTGQAFNNATVP----VSAQATFPIHFCCQQPGTFDLVGSIVY-EVDQHPYQSTF 168
+QN + +N P A + P +P F++ ++ Y + + +
Sbjct: 116 FYIQNFSTVVYNKIVKPKHEATLAYSFIPSENLAGRPFGFNI--NLNYKDSNGIGFSEAV 173
Query: 169 YNGTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQ-------VKQLSKKTKKAPKV 221
YN T++++E + E++FL A ++L + GQ K S T++ P V
Sbjct: 174 YNETVQIIELDDGLDGETIFLYVFLAACVIL--TLVGGQQLLSSLGRKSRSSNTRRTP-V 230
Query: 222 EVGTGTTDASMDEWL 236
EVGT + +WL
Sbjct: 231 EVGTSNPNNVDYDWL 245
>gi|118794223|ref|XP_321364.3| AGAP001721-PA [Anopheles gambiae str. PEST]
gi|68697265|emb|CAJ14158.1| signal sequence receptor [Anopheles gambiae]
gi|116116191|gb|EAA01377.3| AGAP001721-PA [Anopheles gambiae str. PEST]
Length = 284
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 99/235 (42%), Gaps = 20/235 (8%)
Query: 17 ASPLLQVAKCQSDSETGVAETEGGDLGIVGEDAQDFGDGTLSPAPGVDTVCIFPK----- 71
+SP A+ + D E ETE D +V ++ + D + +P DT +F +
Sbjct: 23 SSPFAFAAEDELDEELVDVETE--DAAVVADETEPEDDLETTKSPDADTYLLFTRPLHAS 80
Query: 72 NSARVVAAGEETELLVGMKNDGESSVNVI-AIQASVHLPFDHSLLVQNLTGQAFNNATVP 130
S + AG E LVG N G+ V+ +++AS D S +QN + +N P
Sbjct: 81 GSQLELPAGYPVEFLVGFTNKGQFEDFVVESVEASFRYAMDFSYFIQNFSAVPYNREVKP 140
Query: 131 ----VSAQATFPIHFCCQQPGTFDLVGSIVYEVDQ-HPYQSTFYNGTIEVVESGGFISIE 185
A + P +P F L ++ Y + + + +N T+++ E + E
Sbjct: 141 GHEATVAYSFLPTESFAGRP--FGLNIALNYRDGRGNQFSEAVFNETVQITEVDEGLDGE 198
Query: 186 S----VFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEWL 236
+ VFL + I LLVL G G + + T VE GT +T EW+
Sbjct: 199 TFFLYVFLAAIVILLLVL-GQQFLGSYGKRKRPTAARKVVETGTASTKDVDYEWI 252
>gi|194890481|ref|XP_001977318.1| GG18974 [Drosophila erecta]
gi|190648967|gb|EDV46245.1| GG18974 [Drosophila erecta]
Length = 302
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 21/223 (9%)
Query: 31 ETGVAETEGGDLGIVGEDAQ--DFGDGTLSPAPGVDTVCIFPK-----NSARVVAAGEET 83
E + + EG + + GEDA+ + D S +P DT +F K + G+
Sbjct: 34 EDDLVDVEGEEGAVTGEDAEADEDSDTGSSSSPNADTYLLFTKPLYTPGQQLDLPGGKPV 93
Query: 84 ELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVP---VSAQATF-PI 139
E L+G N G + ++AS P D + +QN + A+N P + TF P
Sbjct: 94 EFLIGFTNKGAEEFVIETVEASFRYPMDFNYFIQNFSAVAYNREVKPGFESTVSYTFLPS 153
Query: 140 HFCCQQPGTFDLVGSIVY-EVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTLGIALLV 198
+P F L ++ Y + + Y +N T+ + E + E+ FL L ++V
Sbjct: 154 DQFAGRP--FGLNIALAYRDANGIQYNEAVFNETVLISEVDEGLDGETFFLYVLLAGIVV 211
Query: 199 LFGLWIHGQVKQL---SKKTKKAPKVEVGTGT-TDASMD-EWL 236
L L + GQ L K+ + A K + TGT D+++D +W+
Sbjct: 212 L--LLVIGQQYLLGSSGKRKRAAAKKVIETGTANDSTIDYDWV 252
>gi|195481704|ref|XP_002101746.1| GE15447 [Drosophila yakuba]
gi|194189270|gb|EDX02854.1| GE15447 [Drosophila yakuba]
Length = 302
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 21/223 (9%)
Query: 31 ETGVAETEGGDLGIVGEDAQ--DFGDGTLSPAPGVDTVCIFPK-----NSARVVAAGEET 83
E + + EG + + GEDA+ + D S +P DT +F K + G+
Sbjct: 34 EDDLVDVEGEEGAVTGEDAEADEDNDTGSSSSPNADTYLLFTKPLYTPGQQLDLPGGKPV 93
Query: 84 ELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVP---VSAQATF-PI 139
E L+G N G + ++AS P D + +QN + A+N P + TF P
Sbjct: 94 EFLIGFTNKGAEEFVIETVEASFRYPMDFNYFIQNFSAVAYNREVKPGFESTVSYTFLPS 153
Query: 140 HFCCQQPGTFDLVGSIVY-EVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTLGIALLV 198
+P F L ++ Y + + Y +N T+ + E + E+ FL L ++V
Sbjct: 154 DQFAGRP--FGLNIALAYRDANGIQYNEAVFNETVLISEVDEGLDGETFFLYVLLAGIVV 211
Query: 199 LFGLWIHGQVKQL---SKKTKKAPKVEVGTGT-TDASMD-EWL 236
L L + GQ L K+ + A K + TGT D+++D +W+
Sbjct: 212 L--LLVIGQQYLLGSSGKRKRAAAKKVIETGTANDSTIDYDWV 252
>gi|18921153|ref|NP_572567.1| lethal (1) G0320 [Drosophila melanogaster]
gi|7291065|gb|AAF46502.1| lethal (1) G0320 [Drosophila melanogaster]
gi|17862418|gb|AAL39686.1| LD26546p [Drosophila melanogaster]
gi|220944574|gb|ACL84830.1| l(1)G0320-PA [synthetic construct]
gi|220954448|gb|ACL89767.1| l(1)G0320-PA [synthetic construct]
Length = 302
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 21/223 (9%)
Query: 31 ETGVAETEGGDLGIVGEDAQ--DFGDGTLSPAPGVDTVCIFPK-----NSARVVAAGEET 83
E + + EG + + GEDA+ + D S +P DT +F K + G+
Sbjct: 34 EDDLVDVEGEEGAVTGEDAEADEDSDTGSSSSPNADTYLLFTKPLYTPGQQLDLPGGKPV 93
Query: 84 ELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVP---VSAQATF-PI 139
E L+G N G + ++AS P D + +QN + A+N P + TF P
Sbjct: 94 EFLIGFTNKGAEEFVIETVEASFRYPMDFNYFIQNFSAVAYNREVKPGFESTVSYTFLPS 153
Query: 140 HFCCQQPGTFDLVGSIVY-EVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTLGIALLV 198
+P F L ++ Y + + Y +N T+ + E + E+ FL L ++V
Sbjct: 154 DQFAGRP--FGLNIALAYRDANGIQYNEAVFNETVLISEVDEGLDGETFFLYVLLAGIVV 211
Query: 199 LFGLWIHGQVKQL---SKKTKKAPKVEVGTGT-TDASMD-EWL 236
L L + GQ L K+ + A K + TGT D+++D +W+
Sbjct: 212 L--LLVIGQQYLLGSSGKRKRAAAKKVIETGTANDSTIDYDWV 252
>gi|290998475|ref|XP_002681806.1| translocon-associated protein, alpha subunit [Naegleria gruberi]
gi|284095431|gb|EFC49062.1| translocon-associated protein, alpha subunit [Naegleria gruberi]
Length = 255
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 68/135 (50%), Gaps = 7/135 (5%)
Query: 75 RVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQ 134
+ V G+ETE+++G N G+ +V I+ + + D +VQN TG A N TV
Sbjct: 66 KTVELGKETEVVLGFLNTGDLPFSVQFIRGYLLMNQDQPYIVQNFTG-ALQNVTVGPEET 124
Query: 135 ATFPIHFCCQQ---PGTFDLVGSIVY-EVDQHPYQSTFYNGTIEVVESGGFISIESVF-- 188
ATF F ++ + ++ + Y V+ + +TF+N TI+ VE+ E+VF
Sbjct: 125 ATFSYKFTPEKMLDSREYTVMVDVFYLNVENDTFSTTFFNQTIQFVEAAESADFETVFSY 184
Query: 189 LVTLGIALLVLFGLW 203
+ G+ L+ FG W
Sbjct: 185 ISLFGMLGLMAFGAW 199
>gi|195350504|ref|XP_002041780.1| GM11361 [Drosophila sechellia]
gi|194123585|gb|EDW45628.1| GM11361 [Drosophila sechellia]
Length = 302
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 21/223 (9%)
Query: 31 ETGVAETEGGDLGIVGEDAQ--DFGDGTLSPAPGVDTVCIFPK-----NSARVVAAGEET 83
E + + EG + + GEDA+ + D S +P DT +F K + G+
Sbjct: 34 EDDLVDVEGEEGAVTGEDAEADEDSDTGSSSSPNADTYLLFTKPLYTPGQQLDLPGGKPV 93
Query: 84 ELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVP---VSAQATF-PI 139
E L+G N G + ++AS P D + +QN + A+N P + TF P
Sbjct: 94 EFLIGFTNKGAEEFVIETVEASFRYPMDFNYFIQNFSAVAYNREVKPGFESTVSYTFLPS 153
Query: 140 HFCCQQPGTFDLVGSIVY-EVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTLGIALLV 198
+P F L ++ Y + + Y +N T+ + E + E+ FL L ++V
Sbjct: 154 DQFAGRP--FGLNIALAYRDANGIQYNEAVFNETVLISEVDEGLDGETFFLYVLLAGIVV 211
Query: 199 LFGLWIHGQVKQL---SKKTKKAPKVEVGTGT-TDASMD-EWL 236
L L + GQ L K+ + A K + TGT D+++D +W+
Sbjct: 212 L--LLVIGQQYLLGSSGKRKRAAAKKVIETGTANDSTIDYDWV 252
>gi|440907853|gb|ELR57944.1| hypothetical protein M91_06214 [Bos grunniens mutus]
Length = 290
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 10/196 (5%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G +P DT +F K A + LVG N G V ++ AS P D+
Sbjct: 75 GEPEASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQF 132
Query: 115 LVQNLTGQAFN---NATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQST 167
+QN N VP QATF F +P F LV ++ Y +++ + +Q
Sbjct: 133 YIQNFXXXXXXLPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDA 192
Query: 168 FYNGTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGT 227
+N T+ ++E + E++F+ +A L L + Q+ + K+ + KVE+GT +
Sbjct: 193 VFNQTVTIIEREDGLDGETIFMYMF-LAGLGLLVVVGLHQLLESRKRKRPIQKVEMGTSS 251
Query: 228 TDASMDEWLQGTAYTQ 243
+ W+ Q
Sbjct: 252 QNDVDMSWIPQETLNQ 267
>gi|308803825|ref|XP_003079225.1| Translocon-associated complex TRAP, alpha subunit (ISS)
[Ostreococcus tauri]
gi|116057680|emb|CAL53883.1| Translocon-associated complex TRAP, alpha subunit (ISS)
[Ostreococcus tauri]
Length = 237
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 86/205 (41%), Gaps = 32/205 (15%)
Query: 61 PGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLT 120
P V+ V +FP GE ++L+G++N G V V + S+++P + + V N T
Sbjct: 38 PDVEAVSVFPDYVDPAFPGGERVKVLLGLRNAGNEEVKVTHLAGSLNVPSNFNFYVANFT 97
Query: 121 GQAFNNATVPVSAQATFPIHFCCQQPGTFDLVGSIVYEVDQHPYQSTFYNGTIEVVESGG 180
+F T S F H + L + YE Y +T++N T+ V++
Sbjct: 98 EASF---TYEFSVDPQFAGH-------SLQLALTAFYEETDVAYATTYFNSTVPVLDPKV 147
Query: 181 FISIE--SVFLVTLGIALLVLFGLWIH-----------------GQVKQLSKKTKKAPKV 221
E ++L +A ++ + GQ K+ + K K APK
Sbjct: 148 LFDRELAVIYLTLASVAFFIVAAIMKAAGLGHLVPFIGDEKPQGGQQKKSTVK-KVAPKP 206
Query: 222 EVGTGTTDASMDEWLQGTAYTQSLS 246
+D+ ++WL+GTA+ + S
Sbjct: 207 APSASASDS--EQWLEGTAFARQSS 229
>gi|195044772|ref|XP_001991870.1| GH11832 [Drosophila grimshawi]
gi|193901628|gb|EDW00495.1| GH11832 [Drosophila grimshawi]
Length = 303
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 26/226 (11%)
Query: 31 ETGVAETEGGDLGIVGEDAQ---DFGDGTLSPAPGVDTVCIFPK-----NSARVVAAGEE 82
E + + + + + GEDA+ D G+ +P DT +F K + G+
Sbjct: 34 EDDLVDVDSDEGAVTGEDAEPDEDPDSGSSRTSPNADTYLLFTKPLHTAGQQLDLPGGKP 93
Query: 83 TELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVP---VSAQATF-P 138
E L+G N GE + ++AS P D + +QN + A+N P + TF P
Sbjct: 94 VEFLIGFTNKGEEEFVIETVEASFRYPMDFNYFIQNFSAVAYNREVKPGFESTVSYTFMP 153
Query: 139 IHFCCQQPGTFDLVGSIVY-EVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTL--GIA 195
+P F L + Y + + Y +N T+ + E + E+ FL L GIA
Sbjct: 154 SDQFAGRP--FGLNIELAYRDANGIQYNEAVFNETVLISEVDEGLDGETFFLYVLLAGIA 211
Query: 196 LLVLFGLWIHGQVKQL---SKKTKKAPKVEVGTGT-TDASMD-EWL 236
+L+L + GQ L K+ + A K + TGT D+++D +W+
Sbjct: 212 VLLL----VIGQQYLLGSSGKRKRAAAKKVIETGTANDSNIDYDWV 253
>gi|242012763|ref|XP_002427097.1| translocon-associated protein subunit alpha precursor, putative
[Pediculus humanus corporis]
gi|212511355|gb|EEB14359.1| translocon-associated protein subunit alpha precursor, putative
[Pediculus humanus corporis]
Length = 313
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 87/210 (41%), Gaps = 31/210 (14%)
Query: 47 EDAQDFGDGTLSPA-PGVDTVCIFPKNSARVVA----AGEETELLVGMKNDGESSVNVIA 101
++ D DGT S A P T +F K S+ A AG+ E LVG N G+ V
Sbjct: 53 DEGGDDEDGTQSGASPDALTTLLFTKPSSASTAVELPAGQIIEFLVGFHNKGKQDFIVET 112
Query: 102 IQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY- 157
+ AS P D+S +QN + A+N P + +AT F + F L + Y
Sbjct: 113 LDASFRYPMDYSFYIQNFSMIAYNRIVKP-THEATLAYSFMTPESFAGRPFGLNIHLSYR 171
Query: 158 EVDQHPYQSTFYNGTIEVVESGGFISIESVFLV-----------TLGIALLVLFGLWIHG 206
+ + + + + +N T+ ++E + E++FL +G LV G
Sbjct: 172 DFEGNAFSESVFNETVNIIEIEEALDCETLFLYVFLAALVVLLLVIGQYFLVSVG----- 226
Query: 207 QVKQLSKKTKKAPKVEVGTGTTDASMDEWL 236
K+ K P VE GT + EWL
Sbjct: 227 -----KKRVGKKPVVETGTTNPNDVDYEWL 251
>gi|198435624|ref|XP_002127544.1| PREDICTED: similar to signal sequence receptor, alpha [Ciona
intestinalis]
Length = 304
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 15/166 (9%)
Query: 63 VDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQ 122
+T IF + + AG++ L+ N G ++ + +I S P D S ++QN +
Sbjct: 87 AETAIIFNSGAEPEIIAGKKASGLIHFSNTGSNNFIITSIDGSFRYPQDFSYVIQNFSVI 146
Query: 123 AFNNATVPVSAQATFPIHFCCQQPG------TFDLVGSIVY-EVDQHPYQSTFYNGTIEV 175
A N + + +F F PG +F L+ ++ Y + +++ Y+ YN TI+V
Sbjct: 147 A-PNKMIDAGKEGSFQYDFL---PGELAGGRSFGLLINVNYKDTEENIYKDAVYNQTIQV 202
Query: 176 VESGGFISIESVFLVTLGIAL--LVLFGLWIHGQVKQLSKKTKKAP 219
+E+ + E+ F+ + +AL L LFGL+ H V +KTKK P
Sbjct: 203 LENEEGVDAETFFMYIMLMALGFLGLFGLY-H-LVGSKGRKTKKRP 246
>gi|384249777|gb|EIE23258.1| hypothetical protein COCSUDRAFT_53555 [Coccomyxa subellipsoidea
C-169]
Length = 254
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 6/135 (4%)
Query: 59 PAP--GVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLV 116
PAP G+ TV P+ + AG E +VG+ N+ + VNV AI S++
Sbjct: 29 PAPLEGLQTVFWLPEYPEKQFPAGALVEAVVGVHNNAKERVNVTAIVGSLNNAQAFHQFY 88
Query: 117 QNLTGQAFNNATVPVSAQATFPIHFCCQQ---PGTFDLVGSIVYEVDQHPYQSTFYNGTI 173
QN T Q A V +A+ +F + P F + ++ Y + STF+N TI
Sbjct: 89 QNFTYQP-QVAVVSPGEEASLSYYFSPDESFPPREFQVALTVFYNTPAGSFASTFFNETI 147
Query: 174 EVVESGGFISIESVF 188
++VE I ++ +F
Sbjct: 148 DIVEVPPLIDVQGIF 162
>gi|239788342|dbj|BAH70858.1| ACYPI006658 [Acyrthosiphon pisum]
Length = 271
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 97/221 (43%), Gaps = 26/221 (11%)
Query: 31 ETGVAETEGGDLGIVGEDAQDFGDGTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMK 90
+ G+ ETEG + I + D L P +F + ++ + AG +E LVG
Sbjct: 37 DQGLVETEGDESTIEDLEPTDADTYLLFTKP------VFEEKASIELPAGRLSEFLVGFT 90
Query: 91 NDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATF-----PIHFCCQQ 145
N G + + + + AS+ P D + +QN T T+P +QAT P +
Sbjct: 91 NKGSNDLVLETLDASLRYPMDFNFHIQNFT-TVLLEKTIPPGSQATLGYAFIPADAFAGR 149
Query: 146 PGTFDLVGSIVY-EVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTLGIALLVLFGLWI 204
P F L ++ Y + + S YN T+ ++E + E++FL L A VL L +
Sbjct: 150 P--FGLSINLAYRDYEGKQMISKLYNDTVNIIEVEEGLDGETLFLYVLMAAACVL--LLV 205
Query: 205 HGQ--VKQLSKK-------TKKAPKVEVGTGTTDASMDEWL 236
GQ + +SKK ++ +E GT T+ +W+
Sbjct: 206 GGQQFLYSVSKKRVGGGLPSRTRANLETGTKTSKQIDMDWV 246
>gi|194769732|ref|XP_001966955.1| GF21794 [Drosophila ananassae]
gi|190622750|gb|EDV38274.1| GF21794 [Drosophila ananassae]
Length = 302
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 99/230 (43%), Gaps = 24/230 (10%)
Query: 24 AKCQSDSETGVAETEGGDLGIVGEDAQ--DFGDGTLSPAPGVDTVCIFPK-----NSARV 76
A+ D V EG + GEDA+ + D S +P DT +F K
Sbjct: 30 AEAVEDDLVDVDSEEGA---VTGEDAEADEDTDSGSSSSPNADTYLLFTKPLYTPGQQLD 86
Query: 77 VAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVP---VSA 133
+ G+ E L+G N G + ++AS P D + +QN + A+N P +
Sbjct: 87 LPGGKPVEFLIGFTNKGAEEFVIETVEASFRYPMDFNYFIQNFSAVAYNREVKPGFESTV 146
Query: 134 QATF-PIHFCCQQPGTFDLVGSIVY-EVDQHPYQSTFYNGTIEVVESGGFISIESVFLVT 191
TF P +P F L ++ Y + + Y +N T+ + E + E+ FL
Sbjct: 147 SYTFLPSDQFAGRP--FGLNIALAYRDANGIQYNEAVFNETVLISEVDEGLDGETFFLYV 204
Query: 192 LGIALLVLFGLWIHGQVKQL---SKKTKKAPKVEVGTGT-TDASMD-EWL 236
L ++VL L + GQ L K+ + A K + TGT D+++D +W+
Sbjct: 205 LLAGIVVL--LLVIGQQYLLGSSGKRKRAAAKKVIETGTANDSTIDYDWV 252
>gi|308468728|ref|XP_003096605.1| CRE-TRAP-1 protein [Caenorhabditis remanei]
gi|308242477|gb|EFO86429.1| CRE-TRAP-1 protein [Caenorhabditis remanei]
Length = 257
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 93/211 (44%), Gaps = 12/211 (5%)
Query: 37 TEGGDLGIVGEDAQDFGDGTLSPAPGVDTVCIFPKNSARV--VAAGEETELLVGMKNDGE 94
T+ G + E++ D G SP G+ + P ++ V G+ + L+G +N GE
Sbjct: 28 TDDGPKTVQEEESLDIG---ASPDAGLAFHFVQPADANVVHEFYTGKPVKFLIGFQNKGE 84
Query: 95 SSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATFPIHFCCQQPGTFDLVGS 154
V + S P D++ +QN T +N P + T F + VG
Sbjct: 85 KDFVVKYSETSFRFPTDYNYHLQNFTRGEYNRRVAP-KEEVTLDYGFYAHETFAGRPVGL 143
Query: 155 IV----YEVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQ-VK 209
+V + D + + + +N T+ ++E S E+ FL +AL + GL++ Q +
Sbjct: 144 VVNVHYQDADGNAFVNNVFNQTVNILEDDSGFSGETGFLFIFFVALSIG-GLYLANQFLS 202
Query: 210 QLSKKTKKAPKVEVGTGTTDASMDEWLQGTA 240
+LS+K+ + + V GT+ EW+ A
Sbjct: 203 KLSRKSGLSKRRVVEQGTSSEVDFEWIPRDA 233
>gi|260834961|ref|XP_002612478.1| hypothetical protein BRAFLDRAFT_75408 [Branchiostoma floridae]
gi|229297855|gb|EEN68487.1| hypothetical protein BRAFLDRAFT_75408 [Branchiostoma floridae]
Length = 215
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 63/135 (46%), Gaps = 7/135 (5%)
Query: 77 VAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQAT 136
+ A + +LVG N G+ V +++ + P D+S +QN T FN P + QA+
Sbjct: 77 IPATKLVRVLVGFTNKGDKDFVVESMEGAFRYPQDYSFYIQNFTTFTFNTVVQP-NTQAS 135
Query: 137 FPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTL 192
F F +P F L ++ Y + D +P+ +N TI VVE + E FL
Sbjct: 136 FEYLFTAAEPFAGRPFGLTIALNYKDADGNPFLDAVFNETISVVELDEGLDGEMFFLYIF 195
Query: 193 GIALLVLFGLWIHGQ 207
A +VL L I GQ
Sbjct: 196 LAAAVVL--LIIGGQ 208
>gi|312385753|gb|EFR30177.1| hypothetical protein AND_00390 [Anopheles darlingi]
Length = 285
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 99/241 (41%), Gaps = 18/241 (7%)
Query: 17 ASPLLQVAKCQSDSETGVAETEGGDLGIVGEDAQDFGDGTLSPAPGVDTVCIFPK----- 71
ASP + ++D E ETE D +V EDA+ + + +P DT +F +
Sbjct: 23 ASPFAFATEDETDEELVDVETE--DAAVVSEDAESEDEPETTKSPDADTFLLFTRPLHSS 80
Query: 72 NSARVVAAGEETELLVGMKNDGESSVNVI-AIQASVHLPFDHSLLVQNLTGQAFNNATVP 130
S + AG E LVG N + ++ ++AS D + +QN + AFN P
Sbjct: 81 GSQLELPAGYPVEFLVGFANKNQFEDFIVETVEASFRYSMDFNYYIQNFSAVAFNREVKP 140
Query: 131 VSAQATFPIHFCCQQP---GTFDLVGSIVYEVDQ-HPYQSTFYNGTIEVVESGGFISIES 186
+AT F + F L ++ Y + + + +N T+++ E + E+
Sbjct: 141 -GHEATVSYSFLPSESFAGRPFGLNIALNYRDSRGNQFSEAVFNETVQITEIDEGLDGET 199
Query: 187 ----VFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEWLQGTAYT 242
VFL + I LLVL G G + + T VE GT + EW+
Sbjct: 200 FFLYVFLAAIVILLLVL-GQQFLGSYGKRKRTTTTRKVVETGTTNSKDVDYEWIPAETLK 258
Query: 243 Q 243
Q
Sbjct: 259 Q 259
>gi|325303666|tpg|DAA34346.1| TPA_inf: translocon-associated protein [Amblyomma variegatum]
Length = 170
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Query: 55 GTLSPAPGVDTVCIF--PKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDH 112
G L P+P DT +F P++ + AG+E LVG N+GE + + AS P D
Sbjct: 68 GPLKPSPHGDTYLLFTKPQDFQSKLPAGKEVHFLVGFSNNGERDFVLDTMDASFRYPMDF 127
Query: 113 SLLVQNLTGQAFNNATVPVSAQATFPIHFCCQQ 145
+ +QN T +N P QAT F +
Sbjct: 128 TFYIQNFTTIGYNKVVKP-KQQATLSYSFFTSE 159
>gi|341885987|gb|EGT41922.1| CBN-TRAP-1 protein [Caenorhabditis brenneri]
gi|341902693|gb|EGT58628.1| hypothetical protein CAEBREN_09865 [Caenorhabditis brenneri]
Length = 257
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 13/179 (7%)
Query: 80 GEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATFPI 139
G+ + L+G +N GE V + S P D++ +QN T +N P + T
Sbjct: 70 GKPVKFLIGFQNKGEKDFVVKYSETSFRFPTDYTYHLQNFTRGEYNRRVAP-KEEVTLDY 128
Query: 140 HFCCQQPGTFDLVGSIV----YEVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTLGIA 195
F + VG +V + D + + + +N T+ ++E S E+ FL +A
Sbjct: 129 GFYAHETFAGRPVGLVVNVHYQDADGNVFVNNVFNQTVNILEDDSGFSGETGFLFIFFVA 188
Query: 196 LLVLFGLWIHGQ-VKQLSKKTKKAPKVEVGTGTTDASMDEWLQGTAYTQSLSSKSKKKK 253
L + GL++ Q + +LS+K+ + + V GT+ EW+ A K+K+KK
Sbjct: 189 LSIG-GLYLANQFLSKLSRKSGLSKRRVVEQGTSSEVDFEWIPRDAV------KNKEKK 240
>gi|390358254|ref|XP_003729216.1| PREDICTED: translocon-associated protein subunit alpha-like isoform
1 [Strongylocentrotus purpuratus]
gi|390358256|ref|XP_800046.3| PREDICTED: translocon-associated protein subunit alpha-like isoform
2 [Strongylocentrotus purpuratus]
Length = 302
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 83/188 (44%), Gaps = 10/188 (5%)
Query: 57 LSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLV 116
L +P DT +F N + + ++LVG N+G+ + ++ A++ P D S +
Sbjct: 88 LKASPDADTTFLFTTNGEKEIPVTIPLQVLVGFTNNGQQDFTIESLHATLRYPQDFSFYI 147
Query: 117 QNLTGQAFNNATVPVSAQATFPIHFCCQQ---PGTFDLVGSIVYEVDQ-HPYQSTFYNGT 172
N T + +N P + +ATF F + F V + Y+ + + Y +N T
Sbjct: 148 YNFTEKEYNTVVEP-NKEATFEYSFQAGEVFAARQFGFVFELAYKDSEGNLYSDAVFNDT 206
Query: 173 IEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLS-KKTKKAPKVEVGTGT---T 228
+ +VE + E+ FL AL+VL + + + K KK K V TGT T
Sbjct: 207 VTLVELDEGLDTETFFLYVFLAALVVLAFVVVQQVMASFGVSKKKKTSKQVVETGTSNHT 266
Query: 229 DASMDEWL 236
D D W+
Sbjct: 267 DVDYD-WI 273
>gi|289742659|gb|ADD20077.1| translocon-associated complex TRAP alpha subunit [Glossina
morsitans morsitans]
Length = 298
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 89/192 (46%), Gaps = 15/192 (7%)
Query: 58 SPAPGVDTVCIFPKNSARV-----VAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDH 112
S +P DT +F K + + + G+ E L+G N G + + ++AS P D
Sbjct: 64 SSSPYADTFLLFTKPTYKPGQQLDLPGGKPVEFLIGFTNKGTNEFIIETVEASFRYPMDF 123
Query: 113 SLLVQNLTGQAFNNATVP-VSAQATFPIHFCCQQPGT-FDLVGSIVY-EVDQHPYQSTFY 169
+ +QN + A+N P + A ++ Q G F L ++ Y + + Y +
Sbjct: 124 NYHIQNFSAVAYNREVKPGLEATVSYSFMPSDQFAGRPFGLNIALNYRDGNGVQYSEAVF 183
Query: 170 NGTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQL---SKKTKKAPKVEVGTG 226
N T+ + E + E+ FL L ++VL L + GQ L K+ + A K + TG
Sbjct: 184 NETVLISEVDEGLDGETFFLYVLLAGIVVL--LLVIGQQYLLGSSGKRKRAAAKKIIETG 241
Query: 227 TT-DASMD-EWL 236
TT D+++D EWL
Sbjct: 242 TTNDSTIDYEWL 253
>gi|268565909|ref|XP_002639582.1| C. briggsae CBR-TRAP-1 protein [Caenorhabditis briggsae]
Length = 257
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 17/181 (9%)
Query: 80 GEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVP---VSAQAT 136
G+ + L+G +N GE V + S P D++ +QN T +N P V+
Sbjct: 70 GKPVKFLIGFQNKGEKDFVVKYSETSFRFPTDYNYHLQNFTRGEYNRRVSPKEEVTLDYG 129
Query: 137 FPIH--FCCQQPGTFDLVGSIVY-EVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTLG 193
F H F + G LV +I Y + D + + + +N T+ ++E S E+ FL
Sbjct: 130 FYAHETFAGRPVG---LVVNIHYQDADGNVFVNNVFNQTVNILEDDSGFSGETGFLFIFF 186
Query: 194 IALLVLFGLWIHGQ-VKQLSKKTKKAPKVEVGTGTTDASMDEWLQGTAYTQSLSSKSKKK 252
+AL + GL++ Q + +LS+K+ + + V GT+ EW+ A K+K+K
Sbjct: 187 VALSIG-GLYLANQFLSKLSRKSGLSKRRVVEQGTSSEVDFEWIPRDAV------KNKEK 239
Query: 253 K 253
K
Sbjct: 240 K 240
>gi|195393764|ref|XP_002055523.1| GJ18745 [Drosophila virilis]
gi|194150033|gb|EDW65724.1| GJ18745 [Drosophila virilis]
Length = 302
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 115/259 (44%), Gaps = 31/259 (11%)
Query: 3 MKNFRVFFFALLLL-------ASPLLQVAKCQSDSETGVAETEGGDLGIVGEDAQ---DF 52
MKN + FF LL+L ++P A E + + + + + GEDA+ +
Sbjct: 1 MKN--LMFFLLLVLPTIICTFSAPNKFGAYAAEAVEDDLVDVDSEEGAVTGEDAEADEES 58
Query: 53 GDGTLSPAPGVDTVCIFPK-----NSARVVAAGEETELLVGMKNDGESSVNVIAIQASVH 107
G+ S +P DT +F K + G+ E L+G N G+ + +++AS
Sbjct: 59 DSGSSSTSPNADTYLLFTKPLHTAGQQLDLPGGKPVEFLIGFTNKGQEEFVIESVEASFR 118
Query: 108 LPFDHSLLVQNLTGQAFNNATVP---VSAQATF-PIHFCCQQPGTFDLVGSIVY-EVDQH 162
P D + +QN + A+N P + TF P +P F L ++ Y + +
Sbjct: 119 YPMDFNYFIQNFSAVAYNREVKPGFESTVSYTFLPSDQFAGRP--FGLNIALAYRDANGI 176
Query: 163 PYQSTFYNGTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQL---SKKTKKAP 219
Y +N T+ + E + E+ FL L ++VL L + GQ L K+ + A
Sbjct: 177 QYNEAVFNETVLISEVDEGLDGETFFLYVLLAGIVVL--LLVIGQQYLLGSSGKRKRAAA 234
Query: 220 KVEVGTGT-TDASMD-EWL 236
K + TGT D+++D +W+
Sbjct: 235 KKVIETGTANDSNIDYDWV 253
>gi|193669405|ref|XP_001951923.1| PREDICTED: translocon-associated protein subunit alpha-like
[Acyrthosiphon pisum]
Length = 271
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 96/221 (43%), Gaps = 26/221 (11%)
Query: 31 ETGVAETEGGDLGIVGEDAQDFGDGTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMK 90
+ G+ ETEG + I + D L P +F + ++ + AG +E LVG
Sbjct: 37 DQGLVETEGDESTIEDLEPTDADTYLLFTKP------VFEEKASIELPAGRLSEFLVGFT 90
Query: 91 NDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATF-----PIHFCCQQ 145
N G + + + + AS+ P D + +QN T T+P +QAT P +
Sbjct: 91 NKGSNDLVLETLDASLRYPMDFNFHIQNFT-TVLLEKTIPPGSQATLGYAFIPADAFAGR 149
Query: 146 PGTFDLVGSIVY-EVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTLGIALLVLFGLWI 204
P F L ++ Y + + S YN T+ ++E + E++FL L A VL L +
Sbjct: 150 P--FGLSINLAYRDYEGKQMISKLYNDTVNIIEVEEGLDGETLFLYVLMAAACVL--LLV 205
Query: 205 HGQ--VKQLSKK-------TKKAPKVEVGTGTTDASMDEWL 236
GQ + + KK ++ +E GT T+ +W+
Sbjct: 206 GGQQFLYSVGKKRVGGGLPSRTRANLETGTKTSKQIDMDWV 246
>gi|300121136|emb|CBK21517.2| unnamed protein product [Blastocystis hominis]
Length = 209
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 4/122 (3%)
Query: 78 AAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATF 137
A E ++V +KN+G + NV S++ D S QN T + FN+ P + F
Sbjct: 60 ALTEPIRVIVNLKNNGVTVYNVTDCMGSLNDVDDFSHYRQNFTERNFNSTLYP-GYEMNF 118
Query: 138 PIHFCCQQ---PGTFDLVGSIVYEVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTLGI 194
F P + L +I YE D Y STF N TIEVV+ + + + ++ +
Sbjct: 119 LYVFGIYDFIDPAEYQLALTIFYETDSDYYASTFLNETIEVVDHSRVMDFQMMTIIAFFL 178
Query: 195 AL 196
AL
Sbjct: 179 AL 180
>gi|332023958|gb|EGI64176.1| Translocon-associated protein subunit alpha [Acromyrmex echinatior]
Length = 263
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 105/247 (42%), Gaps = 22/247 (8%)
Query: 6 FRVFFFALLLLASPLLQVAKCQSDSETGVAETEGGDLGIVGEDAQDFGDGTLSPAPGVDT 65
F + + + LA+ V + ++ + + EG + I+ ++ + + T + + DT
Sbjct: 7 FLILIVSTIALAANGAYVYAQEDENIDDIVDVEGEESSIITDEETE--EDTSNASVDADT 64
Query: 66 VCIFPKN-----SARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLT 120
+F K S + AG E LVG N GE+ + ++ AS D + +QN +
Sbjct: 65 TILFTKPIHNTLSTLELPAGNIIEFLVGFINKGENDFVLESLDASFRYAMDFNFYIQNFS 124
Query: 121 GQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYNGTIEVV 176
FN P +AT F + F L ++ Y + + Y +N T++++
Sbjct: 125 TFTFNKVVKP-KHEATLAYSFIPSESFAGRPFGLNVNLNYKDTNGVSYNEAVFNETVQII 183
Query: 177 ESGGFISIESVFLVTLGIALLVLFGLWIHGQ-------VKQLSKKTKKAPKVEVGTGTTD 229
E + E++FL A ++L + GQ K S T+K P VE+GT +
Sbjct: 184 EIDDGLDGETIFLYVFLAACVIL--TLVGGQQLLSSLGRKSRSSTTRKVP-VEMGTSNPN 240
Query: 230 ASMDEWL 236
+WL
Sbjct: 241 NVDYDWL 247
>gi|383863109|ref|XP_003707025.1| PREDICTED: translocon-associated protein subunit alpha-like
[Megachile rotundata]
Length = 275
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 109/246 (44%), Gaps = 27/246 (10%)
Query: 11 FALLLLASPLLQVAKCQSDSETGV---AETEGGDLGIVGEDAQDFGDGTLSPAPGVDTVC 67
F L+ +++ +L V K + + + + EG D ++ ++ + D + + VDT
Sbjct: 7 FLLIFISTTVLTVNKVYAQEDENIDDIVDIEGEDNSVITDEEPE--DEITTTSTDVDTTI 64
Query: 68 IFPKN-----SARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQ 122
+F K S + AG ELLVG N G++ + ++ AS D + +QN +
Sbjct: 65 LFTKPVYNGLSTLELPAGNLVELLVGFANKGDNDFILESLDASFRYAMDFNFYIQNFSTV 124
Query: 123 AFNNATVP----VSAQATFPIHFCCQQPGTFDLVGSIVY-EVDQHPYQSTFYNGTIEVVE 177
A+N P A + P +P F++ ++ Y + + + YN T++++E
Sbjct: 125 AYNKIVKPKHEATLAYSFIPSENLAGRPFGFNI--NLNYRDTNGASFSEAVYNETVQIIE 182
Query: 178 SGGFISIESVFLVTLGIALLVLFGLWIHGQ-------VKQLSKKTKKAPKVEVGTGTTDA 230
+ E+VFL A ++L + GQ K S T+K P VE+GT +
Sbjct: 183 LDDGLDGETVFLYVFLAACVIL--TLVGGQQLLSSLGRKSRSSTTRKTP-VEMGTSNPNN 239
Query: 231 SMDEWL 236
+WL
Sbjct: 240 VDYDWL 245
>gi|324513680|gb|ADY45615.1| Translocon-associated protein subunit alpha [Ascaris suum]
Length = 271
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 16/257 (6%)
Query: 6 FRVFFFALL--LLASPLLQVAKCQSDSETGVAETEGGDLGIVGEDAQDFGDGTLSPAPGV 63
FR F AL+ LL S + ++ D E V EG + ++ + T+ +P
Sbjct: 3 FRNCFLALVFALLISQEVVRSQGDGDVEDEVINDEGASITPTEKEVTEDEVETIGASPDA 62
Query: 64 DTVCIF--PKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTG 121
+F P+NS + + G+ + L+G N GE V + S P D S +QN T
Sbjct: 63 YVSFLFTLPENS-KDLPGGKLVKFLIGFHNRGEKDFIVRYCETSFRYPQDFSYHIQNFTL 121
Query: 122 QAFNNATVPVSAQATFPIHFCCQQPGTFDLVGSIV--YEVDQH--PYQSTFYNGTIEVVE 177
++ P +A+F F + +G +V + VD + S +N T+ +VE
Sbjct: 122 ARYDRLVAP-KQEASFDYAFFPSEQFAGRPLGLVVELHYVDSEGAVFVSALFNETVMIVE 180
Query: 178 SGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKK------TKKAPKVEVGTGTTDAS 231
+ E+ FL + A +VL L + +L++K +++ +E GT +
Sbjct: 181 DESNFNTETGFLYVIFAAAVVLILLAGQHFLSKLTRKHGMAKSRQQSQALETGTTNKNEV 240
Query: 232 MDEWLQGTAYTQSLSSK 248
EW+ + S K
Sbjct: 241 DFEWIPREVLNHNKSPK 257
>gi|344246379|gb|EGW02483.1| Cancer-associated gene 1 protein-like [Cricetulus griseus]
Length = 655
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 67/155 (43%), Gaps = 9/155 (5%)
Query: 55 GTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSL 114
G +P DT +F K A + LVG N G V ++ AS P D+
Sbjct: 418 GEPEASPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQF 475
Query: 115 LVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYN 170
+QN T N VP QATF F +P F LV ++ Y +++ + +Q +N
Sbjct: 476 YIQNFTALPL-NTIVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFN 534
Query: 171 GTIEVVESGGFISIESVFLVTLGI--ALLVLFGLW 203
T+ V+E + E+ L + G ++ G+W
Sbjct: 535 QTVTVIEREDGLDGETQNLASCGTFKSMQRAGGIW 569
>gi|322799378|gb|EFZ20738.1| hypothetical protein SINV_01170 [Solenopsis invicta]
Length = 195
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 74/171 (43%), Gaps = 15/171 (8%)
Query: 77 VAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQAT 136
+ AG E LVG N GE+ + ++ AS D + +QN + FN P +AT
Sbjct: 19 LPAGNIVEFLVGFTNKGENDFVLESLDASFRYAMDFNFYIQNFSTFTFNKIVKP-KHEAT 77
Query: 137 FPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTL 192
F + F L ++ Y + + Y +N TI+++E + E+VFL
Sbjct: 78 LAYSFIPSESFAGRPFGLNVNLNYKDTNGISYNEAVFNETIQIIEIDDGLDGETVFLYVF 137
Query: 193 GIALLVLFGLWIHGQ-------VKQLSKKTKKAPKVEVGTGTTDASMDEWL 236
A ++L + GQ K S T+K P VE+GT + +WL
Sbjct: 138 LAACVIL--TLVGGQQLLSSLGRKSRSSTTRKVP-VEMGTSNPNNVDYDWL 185
>gi|290561825|gb|ADD38310.1| Translocon-associated protein subunit alpha [Lepeophtheirus
salmonis]
Length = 271
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 14/205 (6%)
Query: 60 APGVDTVCIFPKNSARV----VAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLL 115
+P +T +F + R + AG E LVG N G+S + V ++ AS P +
Sbjct: 58 SPDAETTILFTNPTIRTSVAELPAGRLVEFLVGFTNKGDSDLMVESLDASFRYPMEFKYH 117
Query: 116 VQNLTGQAFNNATVPVS----AQATFPIHFCCQQPGTFDLVGSIVY-EVDQHPYQSTFYN 170
+QN + ++ P + A + P +P L ++ Y ++ + Y +N
Sbjct: 118 IQNFSAISYQKTVKPKTEATVAYSFIPADAFAGRP--IGLTINLAYRDLQGNSYLDPVFN 175
Query: 171 GTIEVVESGGFISIESVFLVTLGIA--LLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTT 228
T+++VE E F+ IA +L+LF ++ Q K KK+ A VE GT
Sbjct: 176 ETVQIVEFDEGFDSEVFFMYLFLIAGCILLLFLVFSFLQSKASKKKSPAARPVETGTSND 235
Query: 229 DASMDEWLQGTAYTQSLSSKSKKKK 253
D EW+ + S+K+ ++
Sbjct: 236 DVDY-EWIPKSTLRTPKSTKTSPRQ 259
>gi|290462131|gb|ADD24113.1| Translocon-associated protein subunit alpha [Lepeophtheirus
salmonis]
Length = 271
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 14/205 (6%)
Query: 60 APGVDTVCIFPKNSARV----VAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLL 115
+P +T +F + R + AG E LVG N G+S + V ++ AS P +
Sbjct: 58 SPDAETTILFTNPTIRTSVAELPAGRLVEFLVGFTNKGDSDLMVESLDASFRYPMEFKYH 117
Query: 116 VQNLTGQAFNNATVPVS----AQATFPIHFCCQQPGTFDLVGSIVY-EVDQHPYQSTFYN 170
+QN + ++ P + A + P +P L ++ Y ++ + Y +N
Sbjct: 118 IQNFSAISYQKTVKPKTEATVAYSFIPADAFAGRP--IGLTINLAYRDLQGNSYLDPVFN 175
Query: 171 GTIEVVESGGFISIESVFLVTLGIA--LLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTT 228
T+++VE E F+ IA +L+LF ++ Q K KK+ A VE GT
Sbjct: 176 ETVQIVEFDEGFDSEVFFMYLFLIAGCILLLFLVFSFLQSKASKKKSPAARPVETGTSND 235
Query: 229 DASMDEWLQGTAYTQSLSSKSKKKK 253
D EW+ + S+K+ ++
Sbjct: 236 DVDY-EWIPKSTLRTPKSTKTSPRQ 259
>gi|300120275|emb|CBK19829.2| unnamed protein product [Blastocystis hominis]
Length = 153
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 65/144 (45%), Gaps = 10/144 (6%)
Query: 78 AAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATF 137
A E ++V +KN+G + NV S++ D S QN T + FN+ P + F
Sbjct: 7 ALAEPIRVIVNLKNNGVTVYNVTDCMGSLNDVDDFSHYRQNFTERNFNSTLYP-GYEMNF 65
Query: 138 PIHFCCQQ---PGTFDLVGSIVYEVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTLGI 194
F P + L +I YE D Y STF N TIEVV+ + + + ++ +
Sbjct: 66 LYVFGIYDFIDPAEYQLALTIFYETDSDYYASTFLNETIEVVDHSRVMDFQMMTIIAFFL 125
Query: 195 ALLVLFGLWIHGQVKQLSKKTKKA 218
AL F ++ LSKK KA
Sbjct: 126 ALGFFFYKYV------LSKKASKA 143
>gi|195446920|ref|XP_002070982.1| GK25547 [Drosophila willistoni]
gi|194167067|gb|EDW81968.1| GK25547 [Drosophila willistoni]
Length = 301
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 19/197 (9%)
Query: 55 GTLSPAPGVDTVCIFPKNSARV-----VAAGEETELLVGMKNDGESSVNVIAIQASVHLP 109
G + +P DT +F K + G+ E L+G N G + ++AS P
Sbjct: 61 GNSNSSPNADTYLLFTKPLYTAGQQFDLPGGKPVEFLIGFTNKGAEEFVIETVEASFRYP 120
Query: 110 FDHSLLVQNLTGQAFNNATVP---VSAQATF-PIHFCCQQPGTFDLVGSIVY-EVDQHPY 164
D + +QN + A+N P + TF P +P F L ++ Y + + Y
Sbjct: 121 MDFNYFIQNFSAVAYNREVKPGFESTVSYTFVPSDQFAGRP--FGLNIALAYRDANGIQY 178
Query: 165 QSTFYNGTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQL---SKKTKKAPKV 221
+N T+ + E + E+ FL L ++VL L + GQ L K+ + A K
Sbjct: 179 NEAVFNETVLISEVDEGLDGETFFLYVLLTGIVVL--LLVIGQQYLLGSSGKRKRAAAKK 236
Query: 222 EVGTGT-TDASMD-EWL 236
+ TGT D+++D +W+
Sbjct: 237 VIETGTANDSTIDYDWV 253
>gi|125983792|ref|XP_001355661.1| GA17087 [Drosophila pseudoobscura pseudoobscura]
gi|54643977|gb|EAL32720.1| GA17087 [Drosophila pseudoobscura pseudoobscura]
Length = 302
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 19/194 (9%)
Query: 58 SPAPGVDTVCIFPK-----NSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDH 112
S +P DT +F K + G+ E L+G N G + ++AS P D
Sbjct: 63 SASPNADTYLLFTKPLYTPGQQLDLPGGKPVEFLIGFTNKGAEEFVIETVEASFRYPMDF 122
Query: 113 SLLVQNLTGQAFNNATVP---VSAQATF-PIHFCCQQPGTFDLVGSIVY-EVDQHPYQST 167
+ +QN + A+N P + TF P +P F L ++ Y + + Y
Sbjct: 123 NYFIQNFSAVAYNREVKPGFESTVSYTFLPSDQFAGRP--FGLNIALAYRDANGIQYNEA 180
Query: 168 FYNGTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQL---SKKTKKAPKVEVG 224
+N T+ + E + E+ FL L ++VL L + GQ L K+ + A K +
Sbjct: 181 VFNETVLISEVDEGLDGETFFLYVLLAGIVVL--LLVIGQQYLLGSSGKRKRAAAKKVIE 238
Query: 225 TGT-TDASMD-EWL 236
TGT D+++D +W+
Sbjct: 239 TGTANDSTIDYDWV 252
>gi|195163553|ref|XP_002022614.1| GL13128 [Drosophila persimilis]
gi|194104606|gb|EDW26649.1| GL13128 [Drosophila persimilis]
Length = 302
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 19/194 (9%)
Query: 58 SPAPGVDTVCIFPK-----NSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDH 112
S +P DT +F K + G+ E L+G N G + ++AS P D
Sbjct: 63 SASPNADTYLLFTKPLYTPGQQLDLPGGKPVEFLIGFTNKGAEEFVIETVEASFRYPMDF 122
Query: 113 SLLVQNLTGQAFNNATVP---VSAQATF-PIHFCCQQPGTFDLVGSIVY-EVDQHPYQST 167
+ +QN + A+N P + TF P +P F L ++ Y + + Y
Sbjct: 123 NYFIQNFSAVAYNREVKPGFESTVSYTFLPSDQFAGRP--FGLNIALAYRDANGIQYNEA 180
Query: 168 FYNGTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQL---SKKTKKAPKVEVG 224
+N T+ + E + E+ FL L ++VL L + GQ L K+ + A K +
Sbjct: 181 VFNETVLISEVDEGLDGETFFLYVLLAGIVVL--LLVIGQQYLLGSSGKRKRAAAKKVIE 238
Query: 225 TGT-TDASMD-EWL 236
TGT D+++D +W+
Sbjct: 239 TGTANDSTIDYDWV 252
>gi|357629146|gb|EHJ78113.1| signal sequence receptor [Danaus plexippus]
Length = 280
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 64/147 (43%), Gaps = 12/147 (8%)
Query: 63 VDTVCIFPK------NSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLV 116
VDT +F K + A + AG E LVG N G V ++AS P D++ +
Sbjct: 65 VDTTILFMKPITSYGDVAFDLQAGYPVEFLVGFINKGSEDYIVETMEASFRYPMDYNYYI 124
Query: 117 QNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYNGT 172
QN T + P +ATF F + F L + Y + + YQ YN T
Sbjct: 125 QNFTALPYYREVKP-KQEATFAYSFIPNEAYAGRPFGLNIQLNYRDASGNYYQEAVYNQT 183
Query: 173 IEVVESGGFISIESVFL-VTLGIALLV 198
I +VE + E+ FL V LG A ++
Sbjct: 184 INIVEVSEGLDGETFFLYVFLGAACVL 210
>gi|229577323|ref|NP_001153353.1| signal sequence receptor, alpha precursor [Nasonia vitripennis]
Length = 280
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 111/253 (43%), Gaps = 18/253 (7%)
Query: 12 ALLLLASPLL-QVAKCQSDSETGVAETEGGDLGIVGEDAQDFGDGTLSPAPGVDTVCIFP 70
A++L SP VA Q D + + EG + IV E+ + +++ + VDT +F
Sbjct: 14 AVILTTSPGSGPVAYAQEDDNDDIVDVEGEESSIVTEEEP--EEESVTASKDVDTTILFT 71
Query: 71 KN-----SARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFN 125
+ S + AG+ E L+G N GE V + S P D + +QN + A+N
Sbjct: 72 EPIHNSLSTLELPAGKPVEFLIGFINKGEIDFVVETVNTSFRYPMDFNFYIQNFSTIAYN 131
Query: 126 NATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYNGTIEVVESGGF 181
P + +AT F + F L ++ Y + + + +N T++++E
Sbjct: 132 KIVKP-NHEATLAYSFVPSESFAGRPFGLNINLNYRDANGLSFHEAVFNETVQIIELDEG 190
Query: 182 ISIESVFLVTLGIALLVLF---GLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEWLQG 238
+ E+VFL A ++L G + + S+ + + VEVGT + +WL
Sbjct: 191 LDGETVFLYIFLAACVILTLVGGQQLLSSFGRRSRSSSRKHTVEVGTSNPNNVDYDWLP- 249
Query: 239 TAYTQSLSSKSKK 251
+ T + +KS K
Sbjct: 250 -SETVRMLNKSPK 261
>gi|409048289|gb|EKM57767.1| hypothetical protein PHACADRAFT_139043 [Phanerochaete carnosa
HHB-10118-sp]
Length = 251
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 17/187 (9%)
Query: 61 PGVDTVCIFPKNSA-RVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNL 119
P + FP+++A V G+ E+LV ++N E +V + I S H P + + L++N
Sbjct: 30 PEIVVTAAFPEDNAFSHVVNGQRNEILVTVENKSERNVTLQNIAGSFHHP-ETNKLIKNT 88
Query: 120 TGQAFNNATVPV--SAQATFPIHFCCQ-QPGTFDLVGSIVYEVDQHPYQSTFYNGTIEVV 176
T + +P+ AQ P F + + G L + +E D Y+ Y+ + +V
Sbjct: 89 TALHYK---IPLLQGAQMKLPYSFYSEFKTGDLRLNIWVEHETDGEKYRVHGYDSVVRIV 145
Query: 177 E-SGGFISIESVFLVTLGIALLVLFGLWIHGQ---VKQLSKKTKKAPKVEVGTGTTDAS- 231
E G F I+ +T I L L G+ + V Q K+ P VGT T +
Sbjct: 146 EPEGSFFDIQ--MWITYLIVLGSLGGVGYYAYLTFVPQPKKRKVPTPSAPVGTVTATGAG 203
Query: 232 --MDEWL 236
+EW+
Sbjct: 204 GYQEEWI 210
>gi|307187712|gb|EFN72684.1| Translocon-associated protein subunit alpha [Camponotus floridanus]
Length = 267
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 94/216 (43%), Gaps = 16/216 (7%)
Query: 34 VAETEGGDLGIVGEDAQDFGDGTLSPAPGVDTVCIFPKN-----SARVVAAGEETELLVG 88
+ + EG + ++ + ++ + T + + DT +F K S + AG E LVG
Sbjct: 45 IVDVEGEESSVITD--EETVEDTSNASADADTTILFTKPIYNTLSTLELPAGNIVEFLVG 102
Query: 89 MKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATFPIHFCCQQP-- 146
N GES + ++ AS D + +QN + FN P + +AT F +
Sbjct: 103 FINKGESDFVLESLDASFRYAMDFNFHIQNFSTFTFNKIVKP-NHEATLAYSFIPSESFA 161
Query: 147 -GTFDLVGSIVY-EVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTLGIALLVLFGLWI 204
F L ++ Y + + Y +N T+++VE + E++FL A ++L +
Sbjct: 162 GRPFGLNVNLNYRDTNGISYNEAVFNETVQIVEIDDGLDGETIFLYVFLAACIILALVGG 221
Query: 205 HGQVKQLSKKTK----KAPKVEVGTGTTDASMDEWL 236
+ L +K++ + VE+GT + +WL
Sbjct: 222 QQLLSSLGRKSRSSTSRKTAVEMGTSNPNNVDYDWL 257
>gi|336370760|gb|EGN99100.1| hypothetical protein SERLA73DRAFT_181916 [Serpula lacrymans var.
lacrymans S7.3]
gi|336383521|gb|EGO24670.1| hypothetical protein SERLADRAFT_468333 [Serpula lacrymans var.
lacrymans S7.9]
Length = 256
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 17/205 (8%)
Query: 61 PGVDTVCIFPKNSA-RVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNL 119
P + FP+N+ V GE ++++ ++N E +V + + S H P D + L++N
Sbjct: 33 PEILIEAAFPENNPFGHVVNGERNQIILVVENKSERNVTITTVAGSFHNP-DTNTLIKNS 91
Query: 120 TGQAFNNATVPVSAQATFPIHFCCQ-QPGTFDLVGSIVYEVDQHPYQSTFYNGTIEVVES 178
T ++ + ++ P F + +PG L + + VD Y+ T Y+ + VVE
Sbjct: 92 TSLQYDLRLLE-GSKLQIPYTFHSEFKPGDLRLNVWLEHVVDDEKYRVTAYDSVVTVVEP 150
Query: 179 G-GFISIE--SVFLVTLGI---ALLVLFGLWIHGQVKQLSKKTKKAP-KVEVGTGTTDAS 231
F + S +LV LG+ A + ++ Q K+ +KT+ +P +V G AS
Sbjct: 151 EISFFDFKLISTYLVVLGLLGGASYFAYQTYM-PQTKKSRRKTRPSPSEVSAPVGAVTAS 209
Query: 232 -----MDEWLQGTAYTQSLSSKSKK 251
+EW+ ++ + K KK
Sbjct: 210 GGGGYQEEWIPEHHLKKTRAGKGKK 234
>gi|384485121|gb|EIE77301.1| hypothetical protein RO3G_02005 [Rhizopus delemar RA 99-880]
Length = 232
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 7/133 (5%)
Query: 61 PGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLT 120
P +D FP N ++ G+ ++++ + N ++ V A+ V D+S +++NLT
Sbjct: 27 PQIDVTTEFPDNPFGLIVNGQRNKVILDINNKEKTPYTVFAVSGQVTKVDDYSGVIRNLT 86
Query: 121 GQAFNNATVPVSAQATF--PIHFCCQQ-PGTFDLVGSIVYEVDQHPYQSTFYNGTIEVVE 177
+ N P+SA+++ P +F + PG LV + D+ + YNGTI V E
Sbjct: 87 TTRYGN---PLSAESSLQIPYNFYSEYAPGEHGLVIFVDLLADETITRVIGYNGTITVTE 143
Query: 178 SG-GFISIESVFL 189
+ I+ +FL
Sbjct: 144 PEVSWFDIQLLFL 156
>gi|426199301|gb|EKV49226.1| hypothetical protein AGABI2DRAFT_191304 [Agaricus bisporus var.
bisporus H97]
Length = 260
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 19/187 (10%)
Query: 63 VDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQ 122
V T N + GE+ L + ++N + +V ++AI S+H P D +L++NLT
Sbjct: 37 VATAAFAESNPFHQIVNGEKNTLTLSVENKSDRNVTLVAIAGSLHHP-DTDVLIKNLTSL 95
Query: 123 AFNNATVPVSAQATFPIHFCCQ-QPGTFDLVGSIVYEVDQHPYQSTFYNGTIEVVE---S 178
+N + + P F + +PG L + + V+ Y+ Y+ + +VE S
Sbjct: 96 NYNMPLIE-NFNINLPYMFYSEFKPGEARLNVWLEHAVEDQKYRVQVYDSIVTIVEPEIS 154
Query: 179 GGFISIESVFLVTLGIALLVLFGLWIHGQ---VKQLSKKTKK-APKVEVGTGTTDAS--- 231
+ S +LV G+ L GL V Q K++KK AP V GT A+
Sbjct: 155 WLDWKMWSTYLVVAGL----LGGLSYFAYMTFVPQPKKRSKKAAPVVSAPVGTVTATGSG 210
Query: 232 --MDEWL 236
+EW+
Sbjct: 211 GYQEEWI 217
>gi|409078310|gb|EKM78673.1| hypothetical protein AGABI1DRAFT_114284 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 260
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 19/187 (10%)
Query: 63 VDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQ 122
V T N + GE+ L + ++N + +V ++AI S+H P D +L++NLT
Sbjct: 37 VATAAFAESNPFHQIVNGEKNTLTLSVENKSDRNVTLVAIAGSLHHP-DTDVLIKNLTSL 95
Query: 123 AFNNATVPVSAQATFPIHFCCQ-QPGTFDLVGSIVYEVDQHPYQSTFYNGTIEVVE---S 178
+N + + P F + +PG L + + V+ Y+ Y+ + +VE S
Sbjct: 96 NYNMPLIE-NFNINLPYMFYSEFKPGEARLNVWLEHAVEDQKYRVQVYDSIVTIVEPEIS 154
Query: 179 GGFISIESVFLVTLGIALLVLFGLWIHGQ---VKQLSKKTKK-APKVEVGTGTTDAS--- 231
+ S +LV G+ L GL V Q K++KK AP V GT A+
Sbjct: 155 WLDWKMWSTYLVVAGL----LGGLSYFAYMTFVPQPKKRSKKAAPVVSAPVGTVTATGSG 210
Query: 232 --MDEWL 236
+EW+
Sbjct: 211 GYQEEWI 217
>gi|67523367|ref|XP_659744.1| hypothetical protein AN2140.2 [Aspergillus nidulans FGSC A4]
gi|40745028|gb|EAA64184.1| hypothetical protein AN2140.2 [Aspergillus nidulans FGSC A4]
gi|259487519|tpe|CBF86259.1| TPA: translocon-associated protein, alpha subunit, putative
(AFU_orthologue; AFUA_2G16120) [Aspergillus nidulans
FGSC A4]
Length = 259
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 86/205 (41%), Gaps = 17/205 (8%)
Query: 43 GIVGEDAQDFGDGTL-SPAPGVDTVCIFPKNSARVV--AAGEETELLVGMKNDGESSVNV 99
G + D D + T +P V FP + V G T+ LV N+ +S+V V
Sbjct: 20 GALAADTADKAEETFEAPTLAVTAQAAFPASEIFGVKLVNGHPTQALVTFTNNEKSAVTV 79
Query: 100 IAIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATFPIHFCCQ-QPGTFDL-VGSIVY 157
I ++ + S LV+NLT + +P AQ + F + P L + S+V
Sbjct: 80 NFIGGTLSTLGEESKLVRNLTATRYG-VEIPAGAQESLSYSFATEMHPQDLRLSLASVVS 138
Query: 158 EVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTLGIALLVLFG--------LWIHGQVK 209
+ + + YNGT+ VVE SI ++ L LL FG +WI
Sbjct: 139 DTEGRFFTVYAYNGTVSVVEPE--TSIFDPQIIFLYFFLLACFGGVVYFFYTVWIAPYFP 196
Query: 210 QLSKKTKK-APKVEVGTGTTDASMD 233
Q K K+ + V + T+AS+D
Sbjct: 197 QKRKSAKQETSRKNVASKKTEASVD 221
>gi|226470316|emb|CAX70438.1| Translocon-associated protein subunit alpha precursor [Schistosoma
japonicum]
Length = 269
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 100/244 (40%), Gaps = 38/244 (15%)
Query: 9 FFFALLLLASPLLQVAKCQSDSETGVAETEGGDLGIVGEDAQDFGDGTLSPAPGVDTVCI 68
F F LLL S + V+ +D T ++E + L V + D G+ P V +
Sbjct: 8 FAFCFLLLFS--ICVSSSLADDATVLSEEDSSLLPTVTNE-HDVYKGS----PAVSVLVA 60
Query: 69 FPK-----NSARV---VAAGEETELLVGMKNDG---ESSVNVIAIQASVHLPFDHSLLVQ 117
F K SAR AGE + L+ + N + + I+ ++H P + +Q
Sbjct: 61 FSKPAYGLYSARREMNFPAGEVSSLVASLANTNPPDKEQFRLDFIEGALHYPSYYDYRMQ 120
Query: 118 NLTGQAFNNATVP---VSAQATFPIHFCCQQPG------TFDLVGSIVYEVDQHPYQS-T 167
N T Q P +S F +P +FDL + Y + + Y S
Sbjct: 121 NFTRQRLQGTLEPGQEISLYYRF-------KPSPELAGRSFDLSIVVYYHDNNNIYYSHK 173
Query: 168 FYNGTIEVVESGGFISIESVFLVTLGIAL--LVLFGLW-IHGQVKQLSKKTKKAPKVEVG 224
+N T+ + E+ + E +FLV L IAL +L G+W + + TKK+ KV
Sbjct: 174 LFNQTVNLFETEEGVDTELIFLVILVIALSIAILIGIWHWFTSIAHKRQPTKKSSKVMEN 233
Query: 225 TGTT 228
G +
Sbjct: 234 DGDS 237
>gi|226470318|emb|CAX70439.1| Translocon-associated protein subunit alpha precursor [Schistosoma
japonicum]
Length = 231
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 98/237 (41%), Gaps = 38/237 (16%)
Query: 9 FFFALLLLASPLLQVAKCQSDSETGVAETEGGDLGIVGEDAQDFGDGTLSPAPGVDTVCI 68
F F LLL S + V+ +D T ++E + L V + D G+ P V +
Sbjct: 8 FSFCFLLLFS--ICVSSSLADDATVLSEEDSSLLPTVTNE-HDVYKGS----PAVSVLVA 60
Query: 69 FPK-----NSARV---VAAGEETELLVGMKNDG---ESSVNVIAIQASVHLPFDHSLLVQ 117
F K SAR AGE + L+ + N + + I+ ++H P + +Q
Sbjct: 61 FSKPAYGLYSARREMNFPAGEVSSLVASLANTNPPDKEQFRLDFIEGALHYPSYYDYRMQ 120
Query: 118 NLTGQAFNNATVP---VSAQATFPIHFCCQQPG------TFDLVGSIVYEVDQHPYQS-T 167
N T Q P +S F +P +FDL + Y + + Y S
Sbjct: 121 NFTRQRLQGTLEPGQEISLYYRF-------KPSPELAGRSFDLSIVVYYHDNNNIYYSHK 173
Query: 168 FYNGTIEVVESGGFISIESVFLVTLGIAL--LVLFGLW-IHGQVKQLSKKTKKAPKV 221
+N T+ + E+ + E +FLV L IAL +L G+W + + TKK+ KV
Sbjct: 174 LFNQTVNLFETEEGVDTELIFLVILVIALSIAILIGIWHWFTSIAHKRQPTKKSSKV 230
>gi|29840932|gb|AAP05933.1| SJCHGC01749 protein [Schistosoma japonicum]
Length = 269
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 98/237 (41%), Gaps = 38/237 (16%)
Query: 9 FFFALLLLASPLLQVAKCQSDSETGVAETEGGDLGIVGEDAQDFGDGTLSPAPGVDTVCI 68
F F LLL S + V+ +D T ++E + L V + D G+ P V +
Sbjct: 8 FAFCFLLLFS--ICVSSSLADDATVLSEEDSSLLPTVTNE-HDVYKGS----PAVSVLVA 60
Query: 69 FPK-----NSARV---VAAGEETELLVGMKNDG---ESSVNVIAIQASVHLPFDHSLLVQ 117
F K SAR AGE + L+ + N + + I+ ++H P + +Q
Sbjct: 61 FSKPAYGLYSARREMNFPAGEVSSLVASLANTNPPDKEQFRLDFIEGALHYPSYYDYRMQ 120
Query: 118 NLTGQAFNNATVP---VSAQATFPIHFCCQQPG------TFDLVGSIVYEVDQHPYQS-T 167
N T Q P +S F +P +FDL + Y + + Y S
Sbjct: 121 NFTRQRLQGTLEPGQEISLYYRF-------KPSPELAGRSFDLSIVVYYHDNNNIYYSHK 173
Query: 168 FYNGTIEVVESGGFISIESVFLVTLGIAL--LVLFGLW-IHGQVKQLSKKTKKAPKV 221
+N T+ + E+ + E +FLV L IAL +L G+W + + TKK+ KV
Sbjct: 174 LFNQTVNLFETEEGVDTELIFLVILVIALSIAILIGIWHWFTSIAHKRQPTKKSSKV 230
>gi|226470312|emb|CAX70436.1| Translocon-associated protein subunit alpha precursor [Schistosoma
japonicum]
gi|226470314|emb|CAX70437.1| Translocon-associated protein subunit alpha precursor [Schistosoma
japonicum]
Length = 269
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 98/237 (41%), Gaps = 38/237 (16%)
Query: 9 FFFALLLLASPLLQVAKCQSDSETGVAETEGGDLGIVGEDAQDFGDGTLSPAPGVDTVCI 68
F F LLL S + V+ +D T ++E + L V + D G+ P V +
Sbjct: 8 FSFCFLLLFS--ICVSSSLADDATVLSEEDSSLLPTVTNE-HDVYKGS----PAVSVLVA 60
Query: 69 FPK-----NSARV---VAAGEETELLVGMKNDG---ESSVNVIAIQASVHLPFDHSLLVQ 117
F K SAR AGE + L+ + N + + I+ ++H P + +Q
Sbjct: 61 FSKPAYGLYSARREMNFPAGEVSSLVASLANTNPPDKEQFRLDFIEGALHYPSYYDYRMQ 120
Query: 118 NLTGQAFNNATVP---VSAQATFPIHFCCQQPG------TFDLVGSIVYEVDQHPYQS-T 167
N T Q P +S F +P +FDL + Y + + Y S
Sbjct: 121 NFTRQRLQGTLEPGQEISLYYRF-------KPSPELAGRSFDLSIVVYYHDNNNIYYSHK 173
Query: 168 FYNGTIEVVESGGFISIESVFLVTLGIAL--LVLFGLW-IHGQVKQLSKKTKKAPKV 221
+N T+ + E+ + E +FLV L IAL +L G+W + + TKK+ KV
Sbjct: 174 LFNQTVNLFETEEGVDTELIFLVILVIALSIAILIGIWHWFTSIAHKRQPTKKSSKV 230
>gi|405117637|gb|AFR92412.1| hypothetical protein CNAG_00279 [Cryptococcus neoformans var.
grubii H99]
Length = 250
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 69/144 (47%), Gaps = 10/144 (6%)
Query: 69 FPK-NSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNA 127
FP+ N+ V GE+ +L+ + N G + +++ AS H P +H LV+N T +
Sbjct: 18 FPETNAFGNVVNGEDNNILIHLINSGSKNYTLVSASASYHDPANHWALVKNATTLKYG-- 75
Query: 128 TVPVSAQATF--PIHFCCQ-QPGTFDLVGSI-VYEVDQHPYQS-TFYNGTIEVVES-GGF 181
VP+ + A F P H + +P L ++ + E S T N T+ +VE+ G +
Sbjct: 76 -VPLVSGANFSAPYHVYSEFRPQELGLTVTVNLAETGTKDLHSITAMNRTVSIVEAPGSW 134
Query: 182 ISIESVFLVTLGIALLVLFGLWIH 205
+ + +FL + L L G W +
Sbjct: 135 LDFQLIFLYLILGTALTLGGWWAY 158
>gi|313215395|emb|CBY42967.1| unnamed protein product [Oikopleura dioica]
gi|313232744|emb|CBY19415.1| unnamed protein product [Oikopleura dioica]
Length = 252
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 111/268 (41%), Gaps = 44/268 (16%)
Query: 7 RVFFFALLLLASPLLQVAKCQS-DSETG---------VAETEGGDLGIVGEDAQDFGDGT 56
R+ A+L LA VAK + D E G + E EG D+GIV E+ + T
Sbjct: 6 RMLPIAILGLA----LVAKAEEFDEEIGDDTVQVNEVLDEDEGEDMGIVDEEESEVQINT 61
Query: 57 LSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIA---IQASVHLPFDHS 113
P + AG+ +E+LV +K S++N I+ H P D S
Sbjct: 62 YWPEA--------------TITAGKVSEVLVSVKV-ASSAMNRYQFGIIEGGFHFPQDQS 106
Query: 114 LLVQNLTGQAFNNATVPVSAQATFPIHFCCQQPG---TFDLVGSIVYEVDQHPYQSTF-- 168
VQN + +N + +ATF F + ++ L ++ YE D P + F
Sbjct: 107 YKVQNFSSIKYNR-DLGSGQEATFLYPFVAAELAGGRSYGLQINLAYEADSSPPRQLFAS 165
Query: 169 -YNGTIEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGT-G 226
N T+EV E+ + E F+ + + + S K KA VEVGT G
Sbjct: 166 VVNQTVEVNENLDNAAAEQFFIF---MTFAAFAAIGFFFFASKFSSKKPKAAPVEVGTGG 222
Query: 227 TTDAS-MDEWLQGTAYTQSLSSKSKKKK 253
DAS + E + T S +S+++K
Sbjct: 223 AADASWIPEIHMKKSDTPKTSPQSRRRK 250
>gi|452822377|gb|EME29397.1| translocon-associated protein alpha subunit [Galdieria sulphuraria]
Length = 282
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 76/185 (41%), Gaps = 19/185 (10%)
Query: 71 KNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVP 130
+N + + G + LVG+ N G ++AI ++H P + VQN T + N T+
Sbjct: 73 ENEEKSIQPGTLVDCLVGVANGGPFPYRILAIGGALHSPAQFNYYVQNFT-LLYVNYTIS 131
Query: 131 VSAQATFPIHFCCQ---QPGTFDLVGSIVYE--------VDQHP------YQSTFYNGTI 173
+ TF F +P + + + Y+ DQ +++TFYN ++
Sbjct: 132 PGKELTFSYRFQPHMQLEPANYIMSLDLFYDGEPLEEMTKDQERTLSSVMFRTTFYNASL 191
Query: 174 EVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMD 233
+ + + ++ + I L+LF + + + K + + + M+
Sbjct: 192 AMKDESNPVDNRLFYITVVAIVTLLLFAFSFY-KFFYPTLKPRAKKLISSKKSSNQNDMN 250
Query: 234 EWLQG 238
+WLQG
Sbjct: 251 DWLQG 255
>gi|343425972|emb|CBQ69504.1| related to palmitoyl-protein thioesterase 1 [Sporisorium reilianum
SRZ2]
Length = 405
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 151 LVGSIVYEVDQHPYQSTFYNGT-IEVVESGGFISIESVFLVTLGIALLVLFGLWIHGQVK 209
L GSI +D H ++ T YN T + V E+GG + +S + L +++ +LF + G V
Sbjct: 326 LDGSIARWID-HAWRWTLYNTTGLRVEETGGIVLTQSFVFIGLFLSVRLLFVILFRG-VD 383
Query: 210 QLSKKTKKAPKVEVGTG 226
LS+K + A KV+ G G
Sbjct: 384 ALSRKRRDADKVQTGPG 400
>gi|170067248|ref|XP_001868406.1| translocon-associated protein subunit alpha [Culex
quinquefasciatus]
gi|167863439|gb|EDS26822.1| translocon-associated protein subunit alpha [Culex
quinquefasciatus]
Length = 291
Score = 43.9 bits (102), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 95/233 (40%), Gaps = 18/233 (7%)
Query: 20 LLQVAKCQSDSETGVAETEGGDLGIVGE--DAQDFGDGTLSPAPGVDTVCIF--PKNSAR 75
+ A+ + D E V E EG D + G+ + + + + +P DT +F P +SA
Sbjct: 26 MAHAAEDELDEELDV-EVEGEDASVTGQAEETETDDEPETTKSPDADTFLLFTRPLHSAG 84
Query: 76 V-----VAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVP 130
+ AG E LVG N G V ++AS P D + +QN + A+N P
Sbjct: 85 SGSQFELPAGYPVEFLVGFANKGSDDFIVETVEASFRYPMDFNYFIQNFSAIAYNREIKP 144
Query: 131 VSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTFYNGTIEVVESGGFISIES 186
+AT F + F L ++ Y + + + +N T+ ++E + E+
Sbjct: 145 -GHEATVSYSFLPSESFAGRPFGLNIALNYRDASGNQFSEAVFNETVSIIEVDEGLDGET 203
Query: 187 VFLV---TLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEWL 236
FL + LL++ G G + + VE GT T EW+
Sbjct: 204 FFLYVFLAAVVVLLLVLGQQFLGSYGKRKRSPAVRKTVETGTTNTKDVDYEWI 256
>gi|196476660|gb|ACG76196.1| translocon-associated protein subunit alpha [Amblyomma americanum]
Length = 163
Score = 43.9 bits (102), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 55 GTLSPAPGVDTVCIF--PKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDH 112
G L P+P DT +F P+N + AG E LVG N GE + AS P D
Sbjct: 68 GPLKPSPHGDTYLLFTKPQNFQSKLPAGXEVHFLVGFXNKGERDFVXDTMDASFRYPMDF 127
Query: 113 SLLVQ 117
+ +Q
Sbjct: 128 TFYIQ 132
>gi|58258493|ref|XP_566659.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134106483|ref|XP_778252.1| hypothetical protein CNBA2520 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260955|gb|EAL23605.1| hypothetical protein CNBA2520 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57222796|gb|AAW40840.1| expressed protein [Cryptococcus neoformans var. neoformans JEC21]
Length = 250
Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 70/146 (47%), Gaps = 14/146 (9%)
Query: 69 FPK-NSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNA 127
FP+ N+ V GE+ +L+ + N G + +++ AS H P +H LV+N T +
Sbjct: 18 FPETNAFGNVVNGEDNNILIHLINSGSKNYTLVSASASYHDPANHWALVKNATTLKYG-- 75
Query: 128 TVPVSAQATF--PIHFCCQ-QPGTFDLVGSI-VYEV---DQHPYQSTFYNGTIEVVES-G 179
VP+ + A F P H + +P L ++ + E D H T N T+ +VE+ G
Sbjct: 76 -VPLVSGANFSAPYHVYSEFRPQELGLTVTVNLAETGTKDLH--YITAMNRTVSIVEAPG 132
Query: 180 GFISIESVFLVTLGIALLVLFGLWIH 205
++ + +FL + L L G W +
Sbjct: 133 SWLDFQLIFLYLILGTALTLGGWWAY 158
>gi|241709321|ref|XP_002413372.1| translocon-associated complex TRAP, alpha subunit, putative [Ixodes
scapularis]
gi|215507186|gb|EEC16680.1| translocon-associated complex TRAP, alpha subunit, putative [Ixodes
scapularis]
Length = 198
Score = 43.9 bits (102), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 51 DFGDGTLSPAPGVDTVCIF--PKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHL 108
D G L P+P DT +F P+ + AG+E LVG N G + + AS+
Sbjct: 55 DDGSQPLKPSPDGDTFLLFTKPQGFQSKLPAGKEVHFLVGFTNKGSKDFVLDTMDASLRY 114
Query: 109 PFDHSLLVQNL 119
P D S +QN+
Sbjct: 115 PMDFSFYIQNV 125
>gi|215259937|gb|ACJ64453.1| translocon-associated protein subunit alpha [Culex tarsalis]
Length = 253
Score = 43.5 bits (101), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 76/191 (39%), Gaps = 15/191 (7%)
Query: 60 APGVDTVCIFPK-------NSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDH 112
+P DT +F + S + AG E LVG N G V ++AS P D
Sbjct: 27 SPDADTFLLFTRPLYSAGSGSQFELPAGYPVEFLVGFTNKGSDDFIVETVEASFRYPMDF 86
Query: 113 SLLVQNLTGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVY-EVDQHPYQSTF 168
+ +QN + A+N P +AT F + F L ++ Y + + +
Sbjct: 87 NYFIQNFSAIAYNREIKP-GHEATVSYSFLPSESFAGRPFGLNIALNYRDASGNQFSEAV 145
Query: 169 YNGTIEVVESGGFISIESVFLV---TLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGT 225
+N T+ +VE + E+ FL + LL++ G G + + VE GT
Sbjct: 146 FNETVSIVEVDEGLDGETFFLYVFLAAVVVLLLVLGQQFLGSYGKRKRSPAVRKTVETGT 205
Query: 226 GTTDASMDEWL 236
+T EW+
Sbjct: 206 TSTKDVDYEWI 216
>gi|403352112|gb|EJY75561.1| hypothetical protein OXYTRI_03049 [Oxytricha trifallax]
Length = 275
Score = 43.5 bits (101), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 81/188 (43%), Gaps = 27/188 (14%)
Query: 59 PAPGVDTVCIFP--------KNSARV-VAAGEETELLVGMKNDGESSVNVIAIQASVHL- 108
P+P +FP KN + + G+ ++VGM N G + V I + +
Sbjct: 79 PSPMAKFSVVFPDYFGKDTQKNLLELSMKQGDNQRIVVGMYNHGIIPLYVKEITGAFYEE 138
Query: 109 -----PFDHSLLVQNLTGQAFNNATV-PVSAQAT----FPIHFCCQQPGTFDLVGSIVYE 158
P + VQN T + +N + P +Q+ FP + + L+ ++ Y
Sbjct: 139 GQAGEPLKY---VQNFTIDSLSNTKLLPSESQSIAYEFFP--YASIPAKNYKLILAVFYS 193
Query: 159 VDQHPYQSTFYNGTIEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTK 216
DQ+ Y + +NG ++V +S + I +F V L GI L++F + + + + SK
Sbjct: 194 DDQYEYSNVVFNGHVDVTQSEQQVGITGLFSVILTGGIVFLIVFIIKVKIEDRYASKDEG 253
Query: 217 KAPKVEVG 224
+ + G
Sbjct: 254 RRKRASQG 261
>gi|351703473|gb|EHB06392.1| Translocon-associated protein subunit alpha [Heterocephalus glaber]
Length = 253
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 42/102 (41%), Gaps = 6/102 (5%)
Query: 60 APGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNL 119
+P DT +F K A + LVG N G V ++ AS P D+ +QN
Sbjct: 99 SPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQFYIQNF 156
Query: 120 TGQAFNNATVPVSAQATFPIHFCCQQP---GTFDLVGSIVYE 158
T N P QATF F +P F LV ++ Y+
Sbjct: 157 TALPLNTLVAP-QRQATFEYSFIPAEPMGGRPFGLVINLNYK 197
>gi|427408450|ref|ZP_18898652.1| hypothetical protein HMPREF9718_01126 [Sphingobium yanoikuyae ATCC
51230]
gi|425712760|gb|EKU75774.1| hypothetical protein HMPREF9718_01126 [Sphingobium yanoikuyae ATCC
51230]
Length = 214
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 54 DGTLSPAPGVDTVCIFPKNSARVV-AAGEETELLVGMKNDGESSVNVIAIQASVHLPFDH 112
+GTL PG+D VCI PK + VV G E +L+ + G S +V A++ FDH
Sbjct: 117 NGTLPAHPGIDWVCISPKAGSDVVQVKGNELKLVWPQPDGGHSLADVEAMEG---WGFDH 173
Query: 113 SLLVQNL-TGQAFNNATVPVSAQATFP 138
LLVQ L A +NA + P
Sbjct: 174 -LLVQPLDDAHAVDNARAAIDLVMARP 199
>gi|392577515|gb|EIW70644.1| hypothetical protein TREMEDRAFT_38320 [Tremella mesenterica DSM
1558]
Length = 245
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 85/196 (43%), Gaps = 26/196 (13%)
Query: 76 VVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQA 135
+V GE T LL+ ++N G + +++ AS H P ++ L +N + +N +P+ +
Sbjct: 26 LVVNGENTGLLLHLQNAGRKNYTLLSAGASYHDPLNYWTLTRNASTLRYN---IPLLSGT 82
Query: 136 TFPIHFCC---QQPGTFDLVGSI-VYEVDQHP--YQSTFYNGTIEVVES-GGFISIESVF 188
F F Q+P L I V E P Y T N T+ VVE+ + +++F
Sbjct: 83 NFSAPFSLYSEQKPQEVGLTVWINVAEQTPQPSLYTLTALNQTVSVVETQAKWYDPQTLF 142
Query: 189 LVTLGIALLVLFGLWIHGQV------KQLSKKTKKAPKV---EVGTGTTDAS--MDEWLQ 237
L + I+ L G W+ K+ +KKTK V G D +EW+
Sbjct: 143 LYLVLISFLGA-GAWLAYNTFFPTLAKRGNKKTKAVKAVVPASPGKAYPDVKPYEEEWIP 201
Query: 238 GTAYTQSLSSKSKKKK 253
Q L S++ K K
Sbjct: 202 ----VQQLKSRASKLK 213
>gi|392564907|gb|EIW58085.1| hypothetical protein TRAVEDRAFT_29482 [Trametes versicolor
FP-101664 SS1]
Length = 225
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 80/185 (43%), Gaps = 40/185 (21%)
Query: 61 PGVDTVCIFPKNSA-RVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNL 119
P V V FP+++A V GE ++ + ++N +V + I S H+P D + LV+N
Sbjct: 32 PVVLAVAAFPEDNAFGHVVNGERNKIFLSIENKSARNVTLKNIAGSFHVP-DSNRLVKN- 89
Query: 120 TGQAFNNATVPVSAQATFPIHFCCQQPGTFDLVGSIVYEVDQHPYQSTFYNGTIEVVE-S 178
PG + L + + VD Y+ T Y+ + VVE +
Sbjct: 90 --------------------------PGDYRLNIWLEHVVDGETYRVTAYDSIVAVVEPA 123
Query: 179 GGFISIE--SVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDAS----- 231
G +I ++ + +L+ G LL +++ + KK +K P V GT A+
Sbjct: 124 GSWIDLKLWTTYLIVTG--LLGALSFYVYTTLFPQQKK-RKTPAVSAPVGTVTATGAGGY 180
Query: 232 MDEWL 236
+EW+
Sbjct: 181 QEEWI 185
>gi|452985807|gb|EME85563.1| hypothetical protein MYCFIDRAFT_130536 [Pseudocercospora fijiensis
CIRAD86]
Length = 258
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 78/207 (37%), Gaps = 20/207 (9%)
Query: 44 IVGEDAQDFGDGTLSPAP-GVDTVCIFPKNSARVVAA--GEETELLVGMKNDGESSVNVI 100
+ GE GD T S P VD FP V G T L+ + N+ +S VNV+
Sbjct: 5 LAGEGKAWSGDSTKSNLPLKVDVNVSFPDAEIFGVKMVNGRPTRALLHIANNEDSEVNVL 64
Query: 101 AIQASVHLPFDHSLL------VQNLTGQAFNNATVPVSAQATFPIHFC-CQQPGTFDLVG 153
A + P D + ++NLTG F +P ++ T F QP L
Sbjct: 65 VATAGLFTPLDTPGMPDPPQNLRNLTGAKF-GTVIPAKSKETLTYAFATVMQPQDLTLEI 123
Query: 154 SIVYEVDQHPYQSTFYNGTIEVVESG-GFISIESVF-----LVTLGIALLVLFGLWI--- 204
V Q Y T + + +VE+ F + +F L G ++ WI
Sbjct: 124 KTVISRAQEMYTLTIFRENVSIVEAPVSFFDPQIIFLYLFLLAAFGGTCYFIYNTWITTL 183
Query: 205 HGQVKQLSKKTKKAPKVEVGTGTTDAS 231
Q K+ K ++A + G + S
Sbjct: 184 FPQKKRGGKGGERAQRSSTGKKPVNPS 210
>gi|393242193|gb|EJD49712.1| hypothetical protein AURDEDRAFT_112506 [Auricularia delicata
TFB-10046 SS5]
Length = 252
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 73/174 (41%), Gaps = 16/174 (9%)
Query: 60 APGVDTVCIFPK-NSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQN 118
AP V FP+ N V GE + + ++N + +V V ++ SVHL D L++N
Sbjct: 27 APDVQATAAFPESNPFHHVVNGERNAVTISVENLSDLNVTVSSVAGSVHL-ADSGKLIKN 85
Query: 119 LTGQAFNNATVPV--SAQATFPIHFCCQ-QPGTFDLVGSIVYEVDQHPYQSTFYNGTIEV 175
LT ++N VP+ + P F + +PG L + Y + ++ + + V
Sbjct: 86 LTALSYN---VPLIKKGKIQVPYTFYSEFRPGDLQLKLWVEYTAPEGKHRVQAFESVVSV 142
Query: 176 VESGGFISIESVFLVTLGIALLVLFGL-------WIHGQVKQLSKKTKKAPKVE 222
VE + + L T I VL GL + G K K+AP E
Sbjct: 143 VEPPASL-FDLKMLATYIIVAGVLGGLGYAAFLNYGPGAATSKGKGKKRAPAAE 195
>gi|33593629|ref|NP_881273.1| hypothetical protein BP2659 [Bordetella pertussis Tohama I]
gi|384204920|ref|YP_005590659.1| hypothetical protein BPTD_2617 [Bordetella pertussis CS]
gi|408416299|ref|YP_006627006.1| hypothetical protein BN118_2471 [Bordetella pertussis 18323]
gi|410473375|ref|YP_006896656.1| hypothetical protein BN117_2810 [Bordetella parapertussis Bpp5]
gi|81424699|sp|Q7VVJ8.1|QUEE_BORPE RecName: Full=7-carboxy-7-deazaguanine synthase; Short=CDG
synthase; AltName: Full=Queuosine biosynthesis protein
QueE
gi|33563702|emb|CAE42935.1| conserved hypothetical protein [Bordetella pertussis Tohama I]
gi|332383034|gb|AEE67881.1| hypothetical protein BPTD_2617 [Bordetella pertussis CS]
gi|401778469|emb|CCJ63896.1| conserved hypothetical protein [Bordetella pertussis 18323]
gi|408443485|emb|CCJ50143.1| conserved hypothetical protein [Bordetella parapertussis Bpp5]
Length = 210
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 40/93 (43%), Gaps = 15/93 (16%)
Query: 54 DGTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHS 113
+GTL P PG+D +C+ PK A VV LV + D +A HL F+H
Sbjct: 118 NGTLPPPPGIDWICVSPKGRAPVVVERGHELKLVFPQADARP-------EAFAHLAFEHF 170
Query: 114 LLVQNLTGQAFNNATVPVSAQATFPIHFCCQQP 146
L Q + G A +A T + +C P
Sbjct: 171 FL-QPMDGPA-------RAAHTTQAVQYCLDHP 195
>gi|47208504|emb|CAF90426.1| unnamed protein product [Tetraodon nigroviridis]
Length = 316
Score = 40.4 bits (93), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 164 YQSTFYNGTIEVVESGGFISIESVFLVTL--GIALLVLFGLWIHGQVKQLSKKTKKAPKV 221
+Q +N T+ V E + E++F+ G+ LLV+ GL H ++ S+K + APKV
Sbjct: 216 FQDAVFNQTVTVTEKEDGLDGETIFMYVFLSGLGLLVIIGL--HQLLE--SRKRRPAPKV 271
Query: 222 EVGTGTTDASMDEWLQGTAYTQSLSSKSKK 251
E+GT + + W+ Q + K+
Sbjct: 272 EMGTSSHNGVDLSWIPQETLNQINKASPKR 301
>gi|381202693|ref|ZP_09909805.1| radical SAM protein [Sphingobium yanoikuyae XLDN2-5]
Length = 214
Score = 40.0 bits (92), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 54 DGTLSPAPGVDTVCIFPKNSARVV-AAGEETELLVGMKNDGESSVNVIAIQASVHLPFDH 112
+GTL PG+D VCI PK + VV G E +L+ + G S +V ++ FDH
Sbjct: 117 NGTLPAHPGIDWVCISPKAGSDVVQVKGNELKLVWPQPDGGHSLADVEVMEG---WGFDH 173
Query: 113 SLLVQNL-TGQAFNNATVPVSAQATFP 138
LLVQ L A +NA + P
Sbjct: 174 -LLVQPLDDAHAVDNARAAIDLVMARP 199
>gi|303313824|ref|XP_003066921.1| hypothetical protein CPC735_001210 [Coccidioides posadasii C735
delta SOWgp]
gi|240106588|gb|EER24776.1| hypothetical protein CPC735_001210 [Coccidioides posadasii C735
delta SOWgp]
gi|320032632|gb|EFW14584.1| translocon-associated protein [Coccidioides posadasii str.
Silveira]
Length = 266
Score = 40.0 bits (92), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 78/192 (40%), Gaps = 17/192 (8%)
Query: 58 SPAPGVDTVCIFPKNSARVV--AAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLL 115
+P+ VD FP + V G T LV N+ V V I AS+ + S
Sbjct: 39 APSLDVDISTTFPDSEIFGVKLVNGLPTNALVKFTNNEPDPVTVDVIGASLWTLSEPSQN 98
Query: 116 VQNLTGQAFNNATVPVSAQATFPIHFCCQQ-PGTFDL-VGSIVYEVDQHPYQSTFYNGTI 173
V+NLT + +N V +++ T F + P L + ++V + D + YNGTI
Sbjct: 99 VRNLTMKRYN-VEVAANSERTLTYGFATEMLPQELSLNIAAMVAKKDGFLFTVPAYNGTI 157
Query: 174 EVVESG-GFISIESVFLVTLGIALLV-----LFGLWIHGQVKQLSK------KTKKAPKV 221
VVE + +FL A V L+ LWI Q K + KKA +
Sbjct: 158 TVVEPDMSIFDPQVIFLYFFVSATFVGASYFLYTLWIAPYFPQKRKPVKSHDRAKKASRQ 217
Query: 222 EVGTGTTDASMD 233
+ G + D D
Sbjct: 218 QAGVDSGDQVSD 229
>gi|119185242|ref|XP_001243431.1| hypothetical protein CIMG_07327 [Coccidioides immitis RS]
gi|392866304|gb|EAS28932.2| translocon-associated protein [Coccidioides immitis RS]
Length = 266
Score = 40.0 bits (92), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 78/192 (40%), Gaps = 17/192 (8%)
Query: 58 SPAPGVDTVCIFPKNSARVV--AAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLL 115
+P+ VD FP + V G T LV N+ V V I AS+ + S
Sbjct: 39 APSLDVDISTTFPDSEIFGVKLVNGLPTNALVKFTNNEPDPVTVDVIGASLWTLSEPSQN 98
Query: 116 VQNLTGQAFNNATVPVSAQATFPIHFCCQQ-PGTFDL-VGSIVYEVDQHPYQSTFYNGTI 173
V+NLT + +N V +++ T F + P L + ++V + D + YNGTI
Sbjct: 99 VRNLTMKRYN-VEVAANSEKTLTYGFATEMLPQELSLNIAAMVAKKDGFLFTVPAYNGTI 157
Query: 174 EVVESG-GFISIESVFLVTLGIALLV-----LFGLWIHGQVKQLSK------KTKKAPKV 221
VVE + +FL A V L+ LWI Q K + KKA +
Sbjct: 158 TVVEPDMSIFDPQVIFLYFFVSATFVGASYFLYTLWIAPYFPQKRKPVKSHDRAKKASRQ 217
Query: 222 EVGTGTTDASMD 233
+ G + D D
Sbjct: 218 QAGVDSGDQVSD 229
>gi|311106693|ref|YP_003979546.1| radical SAM superfamily protein 3 [Achromobacter xylosoxidans A8]
gi|310761382|gb|ADP16831.1| radical SAM superfamily protein 3 [Achromobacter xylosoxidans A8]
Length = 226
Score = 40.0 bits (92), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 17/94 (18%)
Query: 54 DGTLSPAPGVDTVCIFPKNSARVV-AAGEETELLVGMKNDGESSVNVIAIQASVHLPFDH 112
+GT+ P G+D +C+ PK +A VV G+E +L+ N +A HL FDH
Sbjct: 134 NGTIKPPAGIDWICVSPKGTAPVVLERGDELKLVYPQAN--------ARPEAFAHLDFDH 185
Query: 113 SLLVQNLTGQAFNNATVPVSAQATFPIHFCCQQP 146
+Q + G A +A + +C Q P
Sbjct: 186 -FFLQPMDGPA-------RAANTEQAVQYCMQHP 211
>gi|412985438|emb|CCO18884.1| Translocon-associated complex TRAP, alpha subunit (ISS)
[Bathycoccus prasinos]
Length = 350
Score = 40.0 bits (92), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 94/281 (33%), Gaps = 90/281 (32%)
Query: 63 VDTVCIFPKNSARV-VAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTG 121
VDT +FP + A E+ L+G++N G+S++ + AI SV+ P V N +
Sbjct: 63 VDTTVVFPGFGTDLQFPAAEDITALLGIRNVGDSTIELQAIAGSVNAPQAFHYFVANFSK 122
Query: 122 QAFN-----------------------------------------------NATVPVSAQ 134
F+ + V +
Sbjct: 123 YEFSMNDDEEEEQFASFNPKIGSEKLATKRRAGNAAGGKTDAAKNLYTSKEQSVVNAGRE 182
Query: 135 ATFPIHFCCQQP---GTFDLVGSIVYEVDQHPYQSTFYNGTIEVVESGGFISIESVFLV- 190
T P F P F L + Y+ D Y +TF+N T+ V++ + + F+
Sbjct: 183 LTVPYSFQLPTPLAGMDFTLALTAFYQEDGEQYATTFFNHTVRVLDPNVAVDFQLTFVYV 242
Query: 191 -----TLGIALLVL--FGL-----WIHGQVKQLSKKTKK--------------------- 217
LGI VL FG +I + SKK KK
Sbjct: 243 ALGSFALGILYFVLRVFGWDAYLPFIGENAIEASKKQKKKTHEINMAAARAEAARKMSEG 302
Query: 218 APKVEVGTGTTDASMDEWLQGTAYTQSLS-----SKSKKKK 253
G + D+WL GTA+T S +K+K +K
Sbjct: 303 GSAAGNGNKKSGGKEDDWLSGTAFTNPSSFSTGATKAKNRK 343
>gi|410419867|ref|YP_006900316.1| hypothetical protein BN115_2078 [Bordetella bronchiseptica MO149]
gi|427821212|ref|ZP_18988275.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
gi|408447162|emb|CCJ58834.1| conserved hypothetical protein [Bordetella bronchiseptica MO149]
gi|410572212|emb|CCN20479.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
Length = 210
Score = 40.0 bits (92), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 41/93 (44%), Gaps = 15/93 (16%)
Query: 54 DGTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHS 113
+GTL P PG+D +C+ PK A VV LV + D +A HL F+H
Sbjct: 118 NGTLPPPPGIDWICVSPKGRAPVVVERGHELKLVFPQADARP-------EAFAHLAFEHF 170
Query: 114 LLVQNLTGQAFNNATVPVSAQATFPIHFCCQQP 146
L Q + G A T AQA + +C P
Sbjct: 171 FL-QPMDGPARAAHT----AQA---VQYCLDHP 195
>gi|33596287|ref|NP_883930.1| hypothetical protein BPP1653 [Bordetella parapertussis 12822]
gi|33602051|ref|NP_889611.1| hypothetical protein BB3075 [Bordetella bronchiseptica RB50]
gi|412338203|ref|YP_006966958.1| hypothetical protein BN112_0877 [Bordetella bronchiseptica 253]
gi|427814323|ref|ZP_18981387.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
gi|33566056|emb|CAE36954.1| conserved hypothetical protein [Bordetella parapertussis]
gi|33576489|emb|CAE33567.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
gi|408768037|emb|CCJ52795.1| conserved hypothetical protein [Bordetella bronchiseptica 253]
gi|410565323|emb|CCN22878.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
Length = 210
Score = 40.0 bits (92), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 41/93 (44%), Gaps = 15/93 (16%)
Query: 54 DGTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHS 113
+GTL P PG+D +C+ PK A VV LV + D +A HL F+H
Sbjct: 118 NGTLPPPPGIDWICVSPKGRAPVVVERGHELKLVFPQADARP-------EAFAHLAFEHF 170
Query: 114 LLVQNLTGQAFNNATVPVSAQATFPIHFCCQQP 146
L Q + G A T AQA + +C P
Sbjct: 171 FL-QPMDGPARAAHT----AQA---VQYCLDHP 195
>gi|427821731|ref|ZP_18988793.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
gi|410586996|emb|CCN02026.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
Length = 210
Score = 40.0 bits (92), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 41/93 (44%), Gaps = 15/93 (16%)
Query: 54 DGTLSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHS 113
+GTL P PG+D +C+ PK A VV LV + D +A HL F+H
Sbjct: 118 NGTLPPPPGIDWICVSPKGRAPVVVERGHELKLVFPQADARP-------EAFAHLAFEHF 170
Query: 114 LLVQNLTGQAFNNATVPVSAQATFPIHFCCQQP 146
L Q + G A T AQA + +C P
Sbjct: 171 FL-QPMDGPARAAHT----AQA---VQYCLDHP 195
>gi|352100034|ref|ZP_08957961.1| hypothetical protein HAL1_01587 [Halomonas sp. HAL1]
gi|350601382|gb|EHA17428.1| hypothetical protein HAL1_01587 [Halomonas sp. HAL1]
Length = 218
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 54 DGTLSPAPGVDTVCIFPK-NSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDH 112
+GTL+P PG+D +C+ PK N+ VV G+E +L+ + + + Q P D
Sbjct: 123 NGTLAPPPGIDWLCVSPKGNNPLVVTHGDELKLVYPQPDAPPEQFSSLDFQHFFLQPMDL 182
Query: 113 SLLVQNLT 120
+ L Q+ T
Sbjct: 183 APLHQDKT 190
>gi|170058231|ref|XP_001864830.1| MYG1 [Culex quinquefasciatus]
gi|167877410|gb|EDS40793.1| MYG1 [Culex quinquefasciatus]
Length = 319
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 79 AGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATFP 138
AG E LVG N G + + +QA P D + L+QN A NN + + +ATFP
Sbjct: 55 AGYPFEFLVGFDNKGSNDFIMETVQALFRYPMDFNYLLQNFWAIA-NNREIKLGHEATFP 113
>gi|425767641|gb|EKV06209.1| Translocon-associated protein, alpha subunit, putative [Penicillium
digitatum Pd1]
gi|425769189|gb|EKV07689.1| Translocon-associated protein, alpha subunit, putative [Penicillium
digitatum PHI26]
Length = 259
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 9/149 (6%)
Query: 80 GEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATFPI 139
G T+ L+ + ND + + V I S+ P D + +V+NLT + VP + T
Sbjct: 57 GHPTQALIAISNDEPNPITVNFIGGSLRKPDDQAQIVRNLTATRY-AIEVPAGEKETISY 115
Query: 140 HFCCQ-QPGTFDLV-GSIVYEVDQHPYQSTFYNGTIEVVESGGFI-SIESVFLVTLGIAL 196
F + P ++ +IV + + H +NGT+ +VE+ I + +FL +A
Sbjct: 116 SFTTEMHPQDLQMILSAIVTDSEGHLIPILAHNGTVSIVEADTSIFDPQIIFLYFFLLAC 175
Query: 197 L-----VLFGLWIHGQVKQLSKKTKKAPK 220
+ + +W+ Q K K + K
Sbjct: 176 VSGTGYFFYTVWVAPYFPQKRKSGKISEK 204
>gi|422321093|ref|ZP_16402144.1| hypothetical protein HMPREF0005_04153 [Achromobacter xylosoxidans
C54]
gi|317404069|gb|EFV84524.1| hypothetical protein HMPREF0005_04153 [Achromobacter xylosoxidans
C54]
Length = 210
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 17/94 (18%)
Query: 54 DGTLSPAPGVDTVCIFPKNSARVV-AAGEETELLVGMKNDGESSVNVIAIQASVHLPFDH 112
+GT+ P PG+D +C+ PK +A VV G E +L+ N HL FDH
Sbjct: 118 NGTVQPPPGIDWICVSPKGTAPVVIERGNELKLVYPQANALPPRFE--------HLDFDH 169
Query: 113 SLLVQNLTGQAFNNATVPVSAQATFPIHFCCQQP 146
L Q + G A + + QA + +C Q P
Sbjct: 170 FFL-QPMDGP----ARLANTEQA---VQYCMQHP 195
>gi|68161033|gb|AAY86948.1| translocon-associated protein alpha [Ictalurus punctatus]
Length = 161
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Query: 57 LSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLV 116
+ P+P DT +F K A + L+G N G + + ++ AS P D +
Sbjct: 83 MKPSPNADTTILFVKGED--FPANNIVKFLLGFTNKGSENFVIESLDASFRYPQDFQFYI 140
Query: 117 QNLTGQAFNNATVPVSAQATF 137
QN T VP QATF
Sbjct: 141 QNFTALQL-GTVVPPQRQATF 160
>gi|378726131|gb|EHY52590.1| hypothetical protein HMPREF1120_00801 [Exophiala dermatitidis
NIH/UT8656]
Length = 263
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 75/197 (38%), Gaps = 18/197 (9%)
Query: 47 EDAQDFGDGTLSPAPGVDTVCIFPKNSARV----VAAGEETELLVGMKNDGESSVNVIAI 102
E ++ D + SPA V FP A + + G+ TE ++ N+ V V I
Sbjct: 27 EVVEEVEDPSTSPALAVTVEASFP--DAEIFGIKLVNGKPTEAVLSFLNEEPEPVTVQFI 84
Query: 103 QASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATFPIHF-CCQQPGTFDLVGSIVYEVDQ 161
S+ +V+NLT + +P + + P F P L + V
Sbjct: 85 GGSLWTLESTPRIVRNLTTAQYA-VEIPAGEKQSLPYRFQTNMHPQDLRLNLAAVVNAQS 143
Query: 162 HPYQSTFYNGTIEVVESGGFISIESVFLVTL-------GIALLVLFGLWIHGQVKQLSKK 214
Y YNGT+ VVE I + + G+A + +W+ Q +
Sbjct: 144 TFYTLQAYNGTVSVVEPDASIFDPQILFLYFFLLASAAGVAYW-FYTIWVAPYFPQKKRP 202
Query: 215 TKKAP--KVEVGTGTTD 229
KK P KV+VG +D
Sbjct: 203 MKKTPVKKVDVGAVHSD 219
>gi|167534431|ref|XP_001748891.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772571|gb|EDQ86221.1| predicted protein [Monosiga brevicollis MX1]
Length = 242
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 78/188 (41%), Gaps = 8/188 (4%)
Query: 63 VDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQ 122
V T IFP + +V AG +VG++N + V A+ AS+ D + QNL+
Sbjct: 54 VTTTTIFPSHVDKVFPAGSIVSAVVGVRNAASEPIIVNAMAASIRPLEDMTQSFQNLSLI 113
Query: 123 AFNNATVPVSAQATFPIHFCCQ---QPGTFDLVGSIVY---EVDQHPYQSTFYNGTIEVV 176
+ P +A+F F +P TF LV + + + Q Q+ + TI
Sbjct: 114 FLADRIEP-GEEASFNYKFRPSERFEPATFALVLDVGFTDAQDRQFVVQAHNTSVTITEA 172
Query: 177 ESGGFISIESVFLVTLGIALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDEWL 236
E G ++ F+ +A L ++ + K K+E GT + AS +EWL
Sbjct: 173 EDDGDLTGLLPFVSMAALAAFAYVYLQKPELLQTAAAPAAKPEKIERGTRAS-ASGNEWL 231
Query: 237 QGTAYTQS 244
QS
Sbjct: 232 NSANLPQS 239
>gi|83770272|dbj|BAE60405.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 254
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 12/180 (6%)
Query: 50 QDFGDGTLSPAPGVDTVCIFPKNS--ARVVAAGEETELLVGMKNDGESSVNVIAIQASVH 107
Q G T++P + FP + + G T+ LV ND + V V I ++
Sbjct: 19 QSRGKETVAPKLALTAQATFPASEIFGVKIVNGYPTQALVAFTNDEPAPVKVNFIGGTLS 78
Query: 108 -LPFDHSLLVQNLTGQAFNNATVPVSAQATFPIHFCCQ-QPGTFDL-VGSIVYEVDQHPY 164
L ++S++V+NLT ++ +P T + P L + SI+ + + Y
Sbjct: 79 TLDEENSVIVRNLTATGYS-VEIPAGETETLSYQITTEMHPQDLRLSLASIISDNEGRFY 137
Query: 165 QSTFYNGTIEVVE-SGGFISIESVFLVTLGIA-----LLVLFGLWIHGQVKQLSKKTKKA 218
YNGT+ VVE F + +FL +A + + +W+ Q K K A
Sbjct: 138 TVYAYNGTVSVVEPETSFFDPQILFLYFFLLACFSGVVYFFYTVWVAPYFPQKRKSGKGA 197
>gi|453086882|gb|EMF14923.1| hypothetical protein SEPMUDRAFT_37984 [Mycosphaerella populorum
SO2202]
Length = 276
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 66/167 (39%), Gaps = 15/167 (8%)
Query: 80 GEETELLVGMKNDGESSVNVIAIQASVHLPF------DHSLLVQNLTGQAFNNATVPVSA 133
G T L+ + N+ + +NV+A ++ P D V+N T + P +A
Sbjct: 61 GRPTRTLITITNNEATDINVLAATGGLYSPLNTAGAPDPPQSVRNFTSAKYGKTIAPGTA 120
Query: 134 QATFPIHFCCQQPGTFDLVGSIVYEVDQHPYQSTFYNGTIEVVESG-GFISIESVF---- 188
+ + QP L V Q+ + ST + + VVE+ F+ + +F
Sbjct: 121 ETLTYAYATVMQPQDVLLELRAVVSRGQNLFTSTVFRENVSVVEAPTSFLDPQIIFLYLV 180
Query: 189 -LVTLGIALLVLFGLWI---HGQVKQLSKKTKKAPKVEVGTGTTDAS 231
L G + ++ WI Q K+ K ++A + G+ D S
Sbjct: 181 VLAAFGGTIYFIYSTWITTLFPQQKRGGKGGERAKRSSGGSKPVDPS 227
>gi|296815952|ref|XP_002848313.1| signal sequence receptor alpha chain [Arthroderma otae CBS 113480]
gi|238841338|gb|EEQ31000.1| signal sequence receptor alpha chain [Arthroderma otae CBS 113480]
Length = 268
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 72/185 (38%), Gaps = 14/185 (7%)
Query: 59 PAPGVDTVCIFPKNSARVV--AAGEETELLVGMKNDGESSVNVIAIQAS---VHLPFDHS 113
P GV FPK V G+ TE L+ N V V I S + P S
Sbjct: 38 PKLGVTVSTTFPKAEVFGVKLVNGQPTEALLQFSNTDPEPVTVTVIGGSLWTIEAPGKPS 97
Query: 114 LLVQNLTGQAFNNATVPVSAQATFPIHFCCQ-QPGTFDL-VGSIVYEVDQHPYQSTFYNG 171
+ ++NLT + +P Q T P F + P L + +++ + + T YNG
Sbjct: 98 INIRNLTATPYG-MDIPAGDQITLPYIFTNEMHPQDLTLNLAAVISDSKGIMHPITAYNG 156
Query: 172 TIEVVESGGFI-SIESVFLVTLGIA-----LLVLFGLWIHGQVKQLSKKTKKAPKVEVGT 225
T+ VVE I + +FL +A + + LWI Q K K + +
Sbjct: 157 TVSVVEQDTSIFDPQVLFLYVFLLACSAGSVYFFYTLWIAPYFPQKRKGGKGSDRPRKSA 216
Query: 226 GTTDA 230
G + +
Sbjct: 217 GVSSS 221
>gi|407782396|ref|ZP_11129609.1| 7-cyano-7-deazaguanine synthase [Oceanibaculum indicum P24]
gi|407206126|gb|EKE76088.1| 7-cyano-7-deazaguanine synthase [Oceanibaculum indicum P24]
Length = 210
Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 54 DGTLSPAPGVDTVCIFPKNSA-RVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDH 112
+GTL P PG+D +C+ PK A V+ G+E +L+ G + ++ + P D
Sbjct: 118 NGTLEPPPGIDWICVSPKEGADWVLRRGDELKLVYPQPGLGPDGMTALSFRHFWLQPMDG 177
Query: 113 SLLVQN 118
+N
Sbjct: 178 PARAEN 183
>gi|395332224|gb|EJF64603.1| hypothetical protein DICSQDRAFT_80168 [Dichomitus squalens LYAD-421
SS1]
Length = 252
Score = 37.0 bits (84), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 80/187 (42%), Gaps = 16/187 (8%)
Query: 61 PGVDTVCIFPK-NSARVVAAGEETELLVGMKN-DGESSVNVIAIQASVHLPFDHSLLVQN 118
P V FP+ N+ V GE L V +++ + + +V + I S+H LV+N
Sbjct: 32 PVVLAFAQFPETNAFGQVVNGERNALFVAIESKEADRNVTLKNIAGSLH-NAQTDRLVKN 90
Query: 119 LTGQAFNNATVPVSAQATFPIHFCCQ---QPGTFDLVGSIVYEVDQHPYQSTFYNGTIEV 175
LT + +P+ A + F +PG + L I + VD Y+ T Y+ I V
Sbjct: 91 LTKTDY---PIPLIEGAPLQLPFAFHSEFKPGEYKLNIWIEHVVDGKTYRVTAYDSIITV 147
Query: 176 VESGGFISIESVFLVTLGIALLVLFGLWIHGQV---KQLSKKTKKAPKVEVGTGTTDAS- 231
VE I + L+T I +L GL + + Q K+ P VGT T +
Sbjct: 148 VEPESSI-FDFKLLLTYVIVTGLLGGLGYYTYLTLAPQPKKRKIPQPSAPVGTVTATGAG 206
Query: 232 --MDEWL 236
+EW+
Sbjct: 207 GYQEEWI 213
>gi|255953013|ref|XP_002567259.1| Pc21g01940 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588970|emb|CAP95091.1| Pc21g01940 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 260
Score = 37.0 bits (84), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 69/163 (42%), Gaps = 9/163 (5%)
Query: 80 GEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATFPI 139
G T+ L+ + ND + + V + S+ P D + +V+NLT + VP + T
Sbjct: 59 GHPTQALIAISNDEPNPITVNFVGGSLRKPDDQTQIVRNLTATRY-AIEVPAGEKETISY 117
Query: 140 HFCCQ-QPGTFDL-VGSIVYEVDQHPYQSTFYNGTIEVVESGGFI-SIESVFLVTLGIAL 196
F + P + + +I+ + + +NGT+ +VE+ I + +FL +A
Sbjct: 118 SFATEMHPQDLQMTLSAIISDSEGRLLPILAHNGTVSIVEADTSIFDPQIIFLYFFLLAC 177
Query: 197 L-----VLFGLWIHGQVKQLSKKTKKAPKVEVGTGTTDASMDE 234
+ + +W+ Q K K + K G+ + + E
Sbjct: 178 VSGTGYFFYTVWVAPYFPQKRKSGKTSEKRTQGSKRVETPVTE 220
>gi|327299956|ref|XP_003234671.1| hypothetical protein TERG_05264 [Trichophyton rubrum CBS 118892]
gi|326463565|gb|EGD89018.1| hypothetical protein TERG_05264 [Trichophyton rubrum CBS 118892]
Length = 267
Score = 37.0 bits (84), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 74/183 (40%), Gaps = 15/183 (8%)
Query: 80 GEETELLVGMKNDGESSVNVIAIQAS---VHLPFDHSLLVQNLTGQAFNNATVPVSAQAT 136
G+ TE L+ N +V V I S + P + V+NLT + +P Q T
Sbjct: 61 GQPTEALLQFTNPDPETVTVSVIGGSLWTIEAPGKLPVNVRNLTATPYG-MDIPAGDQIT 119
Query: 137 FPIHFCCQ-QPGTFDL-VGSIVYEVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTLGI 194
P F P L + +++ + + T YNGT+ VVE I V + L +
Sbjct: 120 LPYVFTNDMHPQDLTLNLAAVISDSKGIMHPITAYNGTVSVVEQDTSIFDPQVLFLYLFL 179
Query: 195 ------ALLVLFGLWIHGQVKQLSKKTKKAPKVEVGTG---TTDASMDEWLQGTAYTQSL 245
++ + LWI + Q K K + + G + DA+ +GT T++
Sbjct: 180 LACAAGSVYFFYTLWIAPYLPQKRKGGKGSDRARKSAGVSSSVDATDPASTEGTPSTKTY 239
Query: 246 SSK 248
++
Sbjct: 240 DTE 242
>gi|321251407|ref|XP_003192054.1| hypothetical protein CGB_B2710C [Cryptococcus gattii WM276]
gi|317458522|gb|ADV20267.1| Hypothetical Protein CGB_B2710C [Cryptococcus gattii WM276]
Length = 250
Score = 37.0 bits (84), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 9/127 (7%)
Query: 85 LLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVPVSAQATF--PIHFC 142
+L+ + N G + +++ AS H P +H LV+N T + VP+ + A F P H
Sbjct: 35 ILLHLINSGSKNYTLVSASASYHDPANHWALVKNATTLKYG---VPLVSGANFSAPYHVY 91
Query: 143 CQ-QPGTFDLVGSI-VYEVDQHPYQS-TFYNGTIEVVES-GGFISIESVFLVTLGIALLV 198
+ +P L ++ + E S T N T+ +VE+ G ++ + +FL + L
Sbjct: 92 SEFRPKELGLTVTVNLAESGTKDLHSITAMNRTVSIVEAPGSWLDFQLIFLYLILGTALT 151
Query: 199 LFGLWIH 205
L G W +
Sbjct: 152 LGGWWAY 158
>gi|403418279|emb|CCM04979.1| predicted protein [Fibroporia radiculosa]
Length = 254
Score = 37.0 bits (84), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 59/119 (49%), Gaps = 4/119 (3%)
Query: 61 PGVDTVCIFPKNSA-RVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNL 119
P V FP+++A V GE ++L+ ++N + ++ + I S H P + ++LV+N
Sbjct: 31 PVVLATASFPEDNAFGHVVNGERNKILLSVENLSDRNITIKNIAGSFHYP-ESNVLVKNT 89
Query: 120 TGQAFNNATVPVSAQATFPIHFCCQ-QPGTFDLVGSIVYEVDQHPYQSTFYNGTIEVVE 177
+ +++ V A+ P F + +PG L + + + Y+ T Y+ + +VE
Sbjct: 90 SSLSYDVLLVD-GAKIQLPYTFYSEYKPGDLKLSIWLDHVTEGETYRVTAYDSIVTIVE 147
>gi|89891287|ref|ZP_01202794.1| putative extracellular ribonuclease, Endonuclease I family
[Flavobacteria bacterium BBFL7]
gi|89516599|gb|EAS19259.1| putative extracellular ribonuclease, Endonuclease I family
[Flavobacteria bacterium BBFL7]
Length = 505
Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Query: 109 PFDHSL---LVQNLTGQAFNNATVPVSAQATFPIHFCCQQPGTFDLVGSIVYEVDQHPYQ 165
P HSL V TG F A +P++ + F I F QP T D V + Y +D +
Sbjct: 39 PTPHSLNDATVPTYTGIDFTVAPLPITEGSNFDITFTLSQPQTTDFV--LNYTIDLGTFD 96
Query: 166 STFYNGTIEVVESGGFISIESVFLV 190
ST Y G +V + G S+ + + +
Sbjct: 97 STDYTGPSQVTFTAGQTSVVANYTI 121
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.133 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,867,563,305
Number of Sequences: 23463169
Number of extensions: 158358287
Number of successful extensions: 402485
Number of sequences better than 100.0: 280
Number of HSP's better than 100.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 200
Number of HSP's that attempted gapping in prelim test: 402055
Number of HSP's gapped (non-prelim): 289
length of query: 253
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 114
effective length of database: 9,097,814,876
effective search space: 1037150895864
effective search space used: 1037150895864
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 75 (33.5 bits)