BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036703
(365 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P63155|CRNL1_RAT Crooked neck-like protein 1 OS=Rattus norvegicus GN=Crnkl1 PE=2
SV=1
Length = 690
Score = 403 bits (1036), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/395 (53%), Positives = 264/395 (66%), Gaps = 37/395 (9%)
Query: 2 IDHGRNAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEGWLSYIK 61
++H RN WDR +T PRV+Q W Y MEE LGNVAGARQ+FERWM W P+ + W SYI
Sbjct: 131 VNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQPEEQAWHSYIN 190
Query: 62 FKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLADD 121
F+LRY EV+RAR I+ER V HP + WI +A FE K AR VYE AVE F D+
Sbjct: 191 FELRYKEVERARTIYERFVLVHP-AVKNWIKYARFEEKHAYFAHARKVYERAVE-FFGDE 248
Query: 122 HDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYGDR 181
H + E L+VAFAKFEE N KE +R R IYK+ALDRI K A++L++ + FEK++GDR
Sbjct: 249 HMD-EHLYVAFAKFEE---NQKEFERVRVIYKYALDRISKQEAQELFKNYTIFEKKFGDR 304
Query: 182 EGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIANVPPAE 241
GIED I K R QYE+ V+ NP NYD WFDY+RL E + VREVYERAIANVPP +
Sbjct: 305 RGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEADTVREVYERAIANVPPIQ 364
Query: 242 EKRYWQRYIYLWINYALYKEVDAGDLERTRDVYRT--------------LFIFYFSFSPR 287
EKR+W+RYIYLW+NYALY+E++A D ERTR VY+ ++++Y F R
Sbjct: 365 EKRHWKRYIYLWVNYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWLYYAQFEIR 424
Query: 288 ME-----------------ERRIFKKYIEMELCLGNIDPCRKLYEKYLEWSPENCYAWSK 330
+ + ++FK YIE+EL L D CRKLYEK+LE+ PENC +W K
Sbjct: 425 QKNLPFARRALGTSIGKCPKNKLFKGYIELELQLREFDRCRKLYEKFLEFGPENCTSWIK 484
Query: 331 YTELEKSLDETERARAIFELAIAQPILDLPEFLWK 365
+ ELE L + ERARAI+ELAI+QP LD+PE LWK
Sbjct: 485 FAELETILGDIERARAIYELAISQPRLDMPEVLWK 519
Score = 81.6 bits (200), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 140/307 (45%), Gaps = 39/307 (12%)
Query: 55 GWLSYIKFKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAV 114
W+ Y +++ E+QRAR I+ER + N++ W+ +A+ EMK +V+ ARN+++ A+
Sbjct: 83 NWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAI 142
Query: 115 EIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAF 174
Q + + EEM N AR +++ ++ P+ +A + ++ F
Sbjct: 143 TTL-----PRVNQFWYKYTYMEEMLGNVA---GARQVFERWMEWQPEEQA---WHSYINF 191
Query: 175 EKQYGDREGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAI 234
E +Y + E + R YE V +P W Y R EE+ R+VYERA+
Sbjct: 192 ELRYKEVE--------RARTIYERFVLVHPA-VKNWIKYARFEEKHAYFAHARKVYERAV 242
Query: 235 ANVPPAEEKRYWQRYIYLWINYALYKEVDAGDLERTRDVYRTLFIFYFSFSPRMEERRIF 294
+L++ +A ++E + + ER R +Y+ + + E + +F
Sbjct: 243 EFFGDEHMDE------HLYVAFAKFEE-NQKEFERVRVIYK----YALDRISKQEAQELF 291
Query: 295 KKYIEMELCLGN--------IDPCRKLYEKYLEWSPENCYAWSKYTELEKSLDETERARA 346
K Y E G+ + R YE+ ++ +P N AW Y L +S E + R
Sbjct: 292 KNYTIFEKKFGDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEADTVRE 351
Query: 347 IFELAIA 353
++E AIA
Sbjct: 352 VYERAIA 358
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 157/396 (39%), Gaps = 100/396 (25%)
Query: 2 IDHGRNAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEG----WL 57
++ R ++R V + P V W Y R EE A AR+++ER + + D ++
Sbjct: 198 VERARTIYERFVLVHPAVKN-WIKYARFEEKHAYFAHARKVYERAVEFFGDEHMDEHLYV 256
Query: 58 SYIKFKLRYNEVQRARHIF----------------------------------------- 76
++ KF+ E +R R I+
Sbjct: 257 AFAKFEENQKEFERVRVIYKYALDRISKQEAQELFKNYTIFEKKFGDRRGIEDIIVSKRR 316
Query: 77 ---ERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLADDHDEAEQ----LF 129
E V+ +P+N AW ++ E D R VYE A+ + L+
Sbjct: 317 FQYEEEVKANPHNYDAWFDYLRLVESDAEADTVREVYERAIANVPPIQEKRHWKRYIYLW 376
Query: 130 VAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAE-----------DLYRKFLAFEKQ- 177
V +A +EE+ K+ +R R +Y+ +L+ IP + ++ +K L F ++
Sbjct: 377 VNYALYEEL--EAKDPERTRQVYQASLELIPHKKFTFAKMWLYYAQFEIRQKNLPFARRA 434
Query: 178 YGDREG-------IEDAIAGKMRLQYEDGVRK--------NPMNYDTWFDYIRLEERVGN 222
G G + I +++L+ D RK P N +W + LE +G+
Sbjct: 435 LGTSIGKCPKNKLFKGYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAELETILGD 494
Query: 223 QERVREVYERAIANVPPAEEKRYWQRYIYLWINYALYKEVDAGDLERTRDVYRTLFIFYF 282
ER R +YE AI+ + W+ YI E++ + ERTR++YR L
Sbjct: 495 IERARAIYELAISQPRLDMPEVLWKSYIDF--------EIEQEETERTRNLYRQLL---- 542
Query: 283 SFSPRMEERRIFKKYIEMELCL---GNIDPCRKLYE 315
R + +++ + + EL G++ CR++YE
Sbjct: 543 ---QRTQHVKVWISFAQFELSSGKEGSVAKCRQIYE 575
Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 80/159 (50%), Gaps = 17/159 (10%)
Query: 191 KMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIANVPPAEEKRYWQRYI 250
+ R +ED +RKN W Y + EE + +R R +YERA+ +V R I
Sbjct: 65 RKRKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERAL-DVD--------YRNI 115
Query: 251 YLWINYALYKEVDAGDLERTRDVYRTLFIFYFSFSPRMEERRIFKKYIEMELCLGNIDPC 310
LW+ YA E++ + R + R ++ + PR+ + + KY ME LGN+
Sbjct: 116 TLWLKYA---EMEMKN--RQVNHARNIWDRAITTLPRVNQ--FWYKYTYMEEMLGNVAGA 168
Query: 311 RKLYEKYLEWSPENCYAWSKYTELEKSLDETERARAIFE 349
R+++E+++EW PE AW Y E E ERAR I+E
Sbjct: 169 RQVFERWMEWQPEEQ-AWHSYINFELRYKEVERARTIYE 206
Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 107/259 (41%), Gaps = 36/259 (13%)
Query: 3 DHGRNAWDRVVTLSPRVDQ---------LWNNYIRMEE-NLGNVAGARQIFERWMHWMPD 52
D R ++R + P + + LW NY EE + RQ+++ + +P
Sbjct: 347 DTVREVYERAIANVPPIQEKRHWKRYIYLWVNYALYEELEAKDPERTRQVYQASLELIPH 406
Query: 53 HE-----GWLSYIKFKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRAR 107
+ WL Y +F++R + AR + P N + + + E+++ E DR R
Sbjct: 407 KKFTFAKMWLYYAQFEIRQKNLPFARRALGTSIGKCPKN-KLFKGYIELELQLREFDRCR 465
Query: 108 NVYECAVEIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDL 167
+YE +E + ++ KF E+ + +RAR IY+ A+ + E L
Sbjct: 466 KLYEKFLEF--------GPENCTSWIKFAELETILGDIERARAIYELAISQPRLDMPEVL 517
Query: 168 YRKFLAFEKQYGDREGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERV- 226
++ ++ FE IE + R Y +++ + W + + E G + V
Sbjct: 518 WKSYIDFE--------IEQEETERTRNLYRQLLQRT-QHVKVWISFAQFELSSGKEGSVA 568
Query: 227 --REVYERAIANVPPAEEK 243
R++YE A + EEK
Sbjct: 569 KCRQIYEEANKTMRNCEEK 587
>sp|P63154|CRNL1_MOUSE Crooked neck-like protein 1 OS=Mus musculus GN=Crnkl1 PE=2 SV=1
Length = 690
Score = 403 bits (1036), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/395 (53%), Positives = 264/395 (66%), Gaps = 37/395 (9%)
Query: 2 IDHGRNAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEGWLSYIK 61
++H RN WDR +T PRV+Q W Y MEE LGNVAGARQ+FERWM W P+ + W SYI
Sbjct: 131 VNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQPEEQAWHSYIN 190
Query: 62 FKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLADD 121
F+LRY EV+RAR I+ER V HP + WI +A FE K AR VYE AVE F D+
Sbjct: 191 FELRYKEVERARTIYERFVLVHP-AVKNWIKYARFEEKHAYFAHARKVYERAVE-FFGDE 248
Query: 122 HDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYGDR 181
H + E L+VAFAKFEE N KE +R R IYK+ALDRI K A++L++ + FEK++GDR
Sbjct: 249 HMD-EHLYVAFAKFEE---NQKEFERVRVIYKYALDRISKQEAQELFKNYTIFEKKFGDR 304
Query: 182 EGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIANVPPAE 241
GIED I K R QYE+ V+ NP NYD WFDY+RL E + VREVYERAIANVPP +
Sbjct: 305 RGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEADTVREVYERAIANVPPIQ 364
Query: 242 EKRYWQRYIYLWINYALYKEVDAGDLERTRDVYRT--------------LFIFYFSFSPR 287
EKR+W+RYIYLW+NYALY+E++A D ERTR VY+ ++++Y F R
Sbjct: 365 EKRHWKRYIYLWVNYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWLYYAQFEIR 424
Query: 288 ME-----------------ERRIFKKYIEMELCLGNIDPCRKLYEKYLEWSPENCYAWSK 330
+ + ++FK YIE+EL L D CRKLYEK+LE+ PENC +W K
Sbjct: 425 QKNLPFARRALGTSIGKCPKNKLFKGYIELELQLREFDRCRKLYEKFLEFGPENCTSWIK 484
Query: 331 YTELEKSLDETERARAIFELAIAQPILDLPEFLWK 365
+ ELE L + ERARAI+ELAI+QP LD+PE LWK
Sbjct: 485 FAELETILGDIERARAIYELAISQPRLDMPEVLWK 519
Score = 81.6 bits (200), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 140/307 (45%), Gaps = 39/307 (12%)
Query: 55 GWLSYIKFKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAV 114
W+ Y +++ E+QRAR I+ER + N++ W+ +A+ EMK +V+ ARN+++ A+
Sbjct: 83 NWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAI 142
Query: 115 EIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAF 174
Q + + EEM N AR +++ ++ P+ +A + ++ F
Sbjct: 143 TTL-----PRVNQFWYKYTYMEEMLGNVA---GARQVFERWMEWQPEEQA---WHSYINF 191
Query: 175 EKQYGDREGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAI 234
E +Y + E + R YE V +P W Y R EE+ R+VYERA+
Sbjct: 192 ELRYKEVE--------RARTIYERFVLVHPA-VKNWIKYARFEEKHAYFAHARKVYERAV 242
Query: 235 ANVPPAEEKRYWQRYIYLWINYALYKEVDAGDLERTRDVYRTLFIFYFSFSPRMEERRIF 294
+L++ +A ++E + + ER R +Y+ + + E + +F
Sbjct: 243 EFFGDEHMDE------HLYVAFAKFEE-NQKEFERVRVIYK----YALDRISKQEAQELF 291
Query: 295 KKYIEMELCLGN--------IDPCRKLYEKYLEWSPENCYAWSKYTELEKSLDETERARA 346
K Y E G+ + R YE+ ++ +P N AW Y L +S E + R
Sbjct: 292 KNYTIFEKKFGDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEADTVRE 351
Query: 347 IFELAIA 353
++E AIA
Sbjct: 352 VYERAIA 358
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 157/396 (39%), Gaps = 100/396 (25%)
Query: 2 IDHGRNAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEG----WL 57
++ R ++R V + P V W Y R EE A AR+++ER + + D ++
Sbjct: 198 VERARTIYERFVLVHPAVKN-WIKYARFEEKHAYFAHARKVYERAVEFFGDEHMDEHLYV 256
Query: 58 SYIKFKLRYNEVQRARHIF----------------------------------------- 76
++ KF+ E +R R I+
Sbjct: 257 AFAKFEENQKEFERVRVIYKYALDRISKQEAQELFKNYTIFEKKFGDRRGIEDIIVSKRR 316
Query: 77 ---ERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLADDHDEAEQ----LF 129
E V+ +P+N AW ++ E D R VYE A+ + L+
Sbjct: 317 FQYEEEVKANPHNYDAWFDYLRLVESDAEADTVREVYERAIANVPPIQEKRHWKRYIYLW 376
Query: 130 VAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAE-----------DLYRKFLAFEKQ- 177
V +A +EE+ K+ +R R +Y+ +L+ IP + ++ +K L F ++
Sbjct: 377 VNYALYEEL--EAKDPERTRQVYQASLELIPHKKFTFAKMWLYYAQFEIRQKNLPFARRA 434
Query: 178 YGDREG-------IEDAIAGKMRLQYEDGVRK--------NPMNYDTWFDYIRLEERVGN 222
G G + I +++L+ D RK P N +W + LE +G+
Sbjct: 435 LGTSIGKCPKNKLFKGYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAELETILGD 494
Query: 223 QERVREVYERAIANVPPAEEKRYWQRYIYLWINYALYKEVDAGDLERTRDVYRTLFIFYF 282
ER R +YE AI+ + W+ YI E++ + ERTR++YR L
Sbjct: 495 IERARAIYELAISQPRLDMPEVLWKSYIDF--------EIEQEETERTRNLYRQLL---- 542
Query: 283 SFSPRMEERRIFKKYIEMELCL---GNIDPCRKLYE 315
R + +++ + + EL G++ CR++YE
Sbjct: 543 ---QRTQHVKVWISFAQFELSSGKEGSVAKCRQIYE 575
Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 80/159 (50%), Gaps = 17/159 (10%)
Query: 191 KMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIANVPPAEEKRYWQRYI 250
+ R +ED +RKN W Y + EE + +R R +YERA+ +V R I
Sbjct: 65 RKRKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERAL-DVD--------YRNI 115
Query: 251 YLWINYALYKEVDAGDLERTRDVYRTLFIFYFSFSPRMEERRIFKKYIEMELCLGNIDPC 310
LW+ YA E++ + R + R ++ + PR+ + + KY ME LGN+
Sbjct: 116 TLWLKYA---EMEMKN--RQVNHARNIWDRAITTLPRVNQ--FWYKYTYMEEMLGNVAGA 168
Query: 311 RKLYEKYLEWSPENCYAWSKYTELEKSLDETERARAIFE 349
R+++E+++EW PE AW Y E E ERAR I+E
Sbjct: 169 RQVFERWMEWQPEEQ-AWHSYINFELRYKEVERARTIYE 206
Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 107/259 (41%), Gaps = 36/259 (13%)
Query: 3 DHGRNAWDRVVTLSPRVDQ---------LWNNYIRMEE-NLGNVAGARQIFERWMHWMPD 52
D R ++R + P + + LW NY EE + RQ+++ + +P
Sbjct: 347 DTVREVYERAIANVPPIQEKRHWKRYIYLWVNYALYEELEAKDPERTRQVYQASLELIPH 406
Query: 53 HE-----GWLSYIKFKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRAR 107
+ WL Y +F++R + AR + P N + + + E+++ E DR R
Sbjct: 407 KKFTFAKMWLYYAQFEIRQKNLPFARRALGTSIGKCPKN-KLFKGYIELELQLREFDRCR 465
Query: 108 NVYECAVEIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDL 167
+YE +E + ++ KF E+ + +RAR IY+ A+ + E L
Sbjct: 466 KLYEKFLEF--------GPENCTSWIKFAELETILGDIERARAIYELAISQPRLDMPEVL 517
Query: 168 YRKFLAFEKQYGDREGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERV- 226
++ ++ FE IE + R Y +++ + W + + E G + V
Sbjct: 518 WKSYIDFE--------IEQEETERTRNLYRQLLQRT-QHVKVWISFAQFELSSGKEGSVA 568
Query: 227 --REVYERAIANVPPAEEK 243
R++YE A + EEK
Sbjct: 569 KCRQIYEEANKTMRNCEEK 587
>sp|Q9BZJ0|CRNL1_HUMAN Crooked neck-like protein 1 OS=Homo sapiens GN=CRNKL1 PE=1 SV=4
Length = 848
Score = 403 bits (1035), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/395 (53%), Positives = 263/395 (66%), Gaps = 37/395 (9%)
Query: 2 IDHGRNAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEGWLSYIK 61
++H RN WDR +T PRV+Q W Y MEE LGNVAGARQ+FERWM W P+ + W SYI
Sbjct: 292 VNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQPEEQAWHSYIN 351
Query: 62 FKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLADD 121
F+LRY EV RAR I+ER V HP ++ WI +A FE K AR VYE AVE F D+
Sbjct: 352 FELRYKEVDRARTIYERFVLVHP-DVKNWIKYARFEEKHAYFAHARKVYERAVE-FFGDE 409
Query: 122 HDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYGDR 181
H + E L+VAFAKFEE N KE +R R IYK+ALDRI K A++L++ + FEK++GDR
Sbjct: 410 HMD-EHLYVAFAKFEE---NQKEFERVRVIYKYALDRISKQDAQELFKNYTIFEKKFGDR 465
Query: 182 EGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIANVPPAE 241
GIED I K R QYE+ V+ NP NYD WFDY+RL E E VREVYERAIANVPP +
Sbjct: 466 RGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQ 525
Query: 242 EKRYWQRYIYLWINYALYKEVDAGDLERTRDVYRT--------------LFIFYFSFSPR 287
EKR+W+RYIYLWINYALY+E++A D ERTR VY+ ++I Y F R
Sbjct: 526 EKRHWKRYIYLWINYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIR 585
Query: 288 ME-----------------ERRIFKKYIEMELCLGNIDPCRKLYEKYLEWSPENCYAWSK 330
+ + ++FK YIE+EL L D CRKLYEK+LE+ PENC +W K
Sbjct: 586 QKNLSLARRALGTSIGKCPKNKLFKVYIELELQLREFDRCRKLYEKFLEFGPENCTSWIK 645
Query: 331 YTELEKSLDETERARAIFELAIAQPILDLPEFLWK 365
+ ELE L + +RARAI+ELAI+QP LD+PE LWK
Sbjct: 646 FAELETILGDIDRARAIYELAISQPRLDMPEVLWK 680
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 140/319 (43%), Gaps = 52/319 (16%)
Query: 19 VDQLWNNYIRMEENLGNVAGARQI--------FERWMHWMP-DHEGWLSYIKFKLRYNEV 69
+L+ NY E+ G+ G I +E + P +++ W Y++ E
Sbjct: 448 AQELFKNYTIFEKKFGDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEA 507
Query: 70 QRARHIFERLVQCHP---------YNLSAWINFADFE-MKMGEVDRARNVYECAVEIFLA 119
+ R ++ER + P + WIN+A +E ++ + +R R VY+ ++E+
Sbjct: 508 EAVREVYERAIANVPPIQEKRHWKRYIYLWINYALYEELEAKDPERTRQVYQASLELIPH 567
Query: 120 DDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYG 179
A ++++ +A+FE K AR ++ + PK + L++ ++ E Q
Sbjct: 568 KKFTFA-KMWILYAQFE---IRQKNLSLARRALGTSIGKCPKNK---LFKVYIELELQLR 620
Query: 180 DREGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIANVPP 239
+ + + R YE + P N +W + LE +G+ +R R +YE AI+
Sbjct: 621 EFD--------RCRKLYEKFLEFGPENCTSWIKFAELETILGDIDRARAIYELAISQPRL 672
Query: 240 AEEKRYWQRYIYLWINYALYKEVDAGDLERTRDVYRTLFIFYFSFSPRMEERRIFKKYIE 299
+ W+ YI E++ + ERTR++YR L R + +++ + +
Sbjct: 673 DMPEVLWKSYIDF--------EIEQEETERTRNLYRRLL-------QRTQHVKVWISFAQ 717
Query: 300 MELCL---GNIDPCRKLYE 315
EL G++ CR++YE
Sbjct: 718 FELSSGKEGSLTKCRQIYE 736
Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 80/159 (50%), Gaps = 17/159 (10%)
Query: 191 KMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIANVPPAEEKRYWQRYI 250
+ R +ED +RKN W Y + EE + +R R +YERA+ + Y R I
Sbjct: 226 RKRKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERAL-------DVDY--RNI 276
Query: 251 YLWINYALYKEVDAGDLERTRDVYRTLFIFYFSFSPRMEERRIFKKYIEMELCLGNIDPC 310
LW+ YA E++ + R + R ++ + PR+ + + KY ME LGN+
Sbjct: 277 TLWLKYA---EMEMKN--RQVNHARNIWDRAITTLPRVNQ--FWYKYTYMEEMLGNVAGA 329
Query: 311 RKLYEKYLEWSPENCYAWSKYTELEKSLDETERARAIFE 349
R+++E+++EW PE AW Y E E +RAR I+E
Sbjct: 330 RQVFERWMEWQPEE-QAWHSYINFELRYKEVDRARTIYE 367
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 106/256 (41%), Gaps = 36/256 (14%)
Query: 6 RNAWDRVVTLSPRVDQ---------LWNNYIRMEE-NLGNVAGARQIFERWMHWMPDHE- 54
R ++R + P + + LW NY EE + RQ+++ + +P +
Sbjct: 511 REVYERAIANVPPIQEKRHWKRYIYLWINYALYEELEAKDPERTRQVYQASLELIPHKKF 570
Query: 55 ----GWLSYIKFKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVY 110
W+ Y +F++R + AR + P N + + + E+++ E DR R +Y
Sbjct: 571 TFAKMWILYAQFEIRQKNLSLARRALGTSIGKCPKN-KLFKVYIELELQLREFDRCRKLY 629
Query: 111 ECAVEIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRK 170
E +E + ++ KF E+ + DRAR IY+ A+ + E L++
Sbjct: 630 EKFLEF--------GPENCTSWIKFAELETILGDIDRARAIYELAISQPRLDMPEVLWKS 681
Query: 171 FLAFEKQYGDREGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQ---ERVR 227
++ FE IE + R Y +++ + W + + E G + + R
Sbjct: 682 YIDFE--------IEQEETERTRNLYRRLLQRT-QHVKVWISFAQFELSSGKEGSLTKCR 732
Query: 228 EVYERAIANVPPAEEK 243
++YE A + EEK
Sbjct: 733 QIYEEANKTMRNCEEK 748
>sp|P17886|CRN_DROME Protein crooked neck OS=Drosophila melanogaster GN=crn PE=2 SV=2
Length = 702
Score = 393 bits (1010), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/395 (51%), Positives = 263/395 (66%), Gaps = 37/395 (9%)
Query: 2 IDHGRNAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEGWLSYIK 61
++H RN WDR VT+ PRV+Q W Y MEE L NVAGARQ+FERWM W P+ + W +Y+
Sbjct: 126 VNHARNLWDRAVTIMPRVNQFWYKYTYMEEMLENVAGARQVFERWMEWQPEEQAWQTYVN 185
Query: 62 FKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLADD 121
F+LRY E+ RAR I+ER V HP ++ WI FA FE G + +R V+E AVE F DD
Sbjct: 186 FELRYKEIDRAREIYERFVYVHP-DVKNWIKFARFEESHGFIHGSRRVFERAVE-FFGDD 243
Query: 122 HDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYGDR 181
+ E E+LF+AFA+FEE KE DRAR IYK+ALD +PK R ++L++ + EK+YGDR
Sbjct: 244 YIE-ERLFIAFARFEE---GQKEHDRARIIYKYALDHLPKDRTQELFKAYTKHEKKYGDR 299
Query: 182 EGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIANVPPAE 241
GIED I K + QYE V NP NYD WFDY+RL E G+++++RE YERAI+NVPPA
Sbjct: 300 AGIEDVIVSKRKYQYEQEVAANPTNYDAWFDYLRLIEAEGDRDQIRETYERAISNVPPAN 359
Query: 242 EKRYWQRYIYLWINYALYKEVDAGDLERTRDVYRT--------------LFIFYFSFSPR 287
EK +W+RYIYLWINYALY+E++A D ERTR +Y+T L++ Y F R
Sbjct: 360 EKNFWRRYIYLWINYALYEELEAEDAERTRQIYKTCLELIPHKQFTFSKLWLLYAQFEIR 419
Query: 288 MEE-----------------RRIFKKYIEMELCLGNIDPCRKLYEKYLEWSPENCYAWSK 330
+E ++F+ YI++E+ L + CR LYEK+LE+ PENC W K
Sbjct: 420 CKELQRARKALGLAIGMCPRDKLFRGYIDLEIQLREFERCRMLYEKFLEFGPENCVTWMK 479
Query: 331 YTELEKSLDETERARAIFELAIAQPILDLPEFLWK 365
+ ELE L +T+RARAIFELA+ QP LD+PE LWK
Sbjct: 480 FAELENLLGDTDRARAIFELAVQQPRLDMPELLWK 514
Score = 65.1 bits (157), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 143/308 (46%), Gaps = 43/308 (13%)
Query: 56 WLSYIKFKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVE 115
W+ Y +++ + E+QRAR I+ER + N++ W+ +A+ EMK +V+ ARN+++ AV
Sbjct: 79 WIKYAQWEEQQQEIQRARSIWERALDNEHRNVTLWLKYAEMEMKNKQVNHARNLWDRAVT 138
Query: 116 IFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFE 175
I Q + + EEM N AR +++ ++ P+ +A ++ ++ FE
Sbjct: 139 IM-----PRVNQFWYKYTYMEEMLENVAG---ARQVFERWMEWQPEEQA---WQTYVNFE 187
Query: 176 KQYGDREGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIA 235
+Y + + R YE V +P + W + R EE G R V+ERA+
Sbjct: 188 LRYKE--------IDRAREIYERFVYVHP-DVKNWIKFARFEESHGFIHGSRRVFERAV- 237
Query: 236 NVPPAEEKRYWQRYI--YLWINYALYKEVDAGDLERTRDVYRTLFIFYFSFSPRMEERRI 293
+ + YI L+I +A ++E ++ D R ++ + P+ + +
Sbjct: 238 -------EFFGDDYIEERLFIAFARFEEG-----QKEHDRARIIYKYALDHLPKDRTQEL 285
Query: 294 FKKYIEMELCLGN--------IDPCRKLYEKYLEWSPENCYAWSKYTELEKSLDETERAR 345
FK Y + E G+ + + YE+ + +P N AW Y L ++ + ++ R
Sbjct: 286 FKAYTKHEKKYGDRAGIEDVIVSKRKYQYEQEVAANPTNYDAWFDYLRLIEAEGDRDQIR 345
Query: 346 AIFELAIA 353
+E AI+
Sbjct: 346 ETYERAIS 353
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 17/159 (10%)
Query: 191 KMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIANVPPAEEKRYWQRYI 250
+ R +ED +RKN M W Y + EE+ +R R ++ERA+ N R +
Sbjct: 60 RKRKTFEDNLRKNRMVVSHWIKYAQWEEQQQEIQRARSIWERALDNE---------HRNV 110
Query: 251 YLWINYALYKEVDAGDLERTRDVYRTLFIFYFSFSPRMEERRIFKKYIEMELCLGNIDPC 310
LW+ YA E++ + + + R L+ + PR+ + + KY ME L N+
Sbjct: 111 TLWLKYA---EMEMKN--KQVNHARNLWDRAVTIMPRVNQ--FWYKYTYMEEMLENVAGA 163
Query: 311 RKLYEKYLEWSPENCYAWSKYTELEKSLDETERARAIFE 349
R+++E+++EW PE AW Y E E +RAR I+E
Sbjct: 164 RQVFERWMEWQPEE-QAWQTYVNFELRYKEIDRAREIYE 201
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 24/195 (12%)
Query: 3 DHGRNAWDRVVTLSPRVDQ---------LWNNYIRMEE-NLGNVAGARQIFERWMHWMPD 52
D R ++R ++ P ++ LW NY EE + RQI++ + +P
Sbjct: 342 DQIRETYERAISNVPPANEKNFWRRYIYLWINYALYEELEAEDAERTRQIYKTCLELIPH 401
Query: 53 HE-----GWLSYIKFKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRAR 107
+ WL Y +F++R E+QRAR + P + + + D E+++ E +R R
Sbjct: 402 KQFTFSKLWLLYAQFEIRCKELQRARKALGLAIGMCPRD-KLFRGYIDLEIQLREFERCR 460
Query: 108 NVYECAVEIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDL 167
+YE +E + V + KF E+ +TDRAR I++ A+ + E L
Sbjct: 461 MLYEKFLEF--------GPENCVTWMKFAELENLLGDTDRARAIFELAVQQPRLDMPELL 512
Query: 168 YRKFLAFEKQYGDRE 182
++ ++ FE G+ E
Sbjct: 513 WKAYIDFEVALGETE 527
Score = 39.3 bits (90), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 14/90 (15%)
Query: 2 IDHGRNAWDRVVTLSPRVDQ---LWNNYIRMEENLGNVAGARQIFERWMHWMPDHEGWLS 58
D R ++ V PR+D LW YI E LG ARQ++ER + + W+S
Sbjct: 490 TDRARAIFELAVQ-QPRLDMPELLWKAYIDFEVALGETELARQLYERLLERTQHVKVWMS 548
Query: 59 YIKFKLRYNE----------VQRARHIFER 78
+ KF++ + VQ AR I+ER
Sbjct: 549 FAKFEMGLSHGDSGPDAELNVQLARRIYER 578
>sp|Q54XP4|CRNL1_DICDI Crooked neck-like protein 1 OS=Dictyostelium discoideum GN=crnkl1
PE=3 SV=1
Length = 705
Score = 376 bits (965), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/395 (48%), Positives = 254/395 (64%), Gaps = 37/395 (9%)
Query: 2 IDHGRNAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEGWLSYIK 61
I+ RN WDR V L PRV QLW Y ME+ LGN AR IFERWM W P+ + W SY+K
Sbjct: 125 INLARNIWDRAVCLLPRVSQLWFKYTFMEDMLGNYPAARAIFERWMQWKPEPQAWNSYLK 184
Query: 62 FKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLADD 121
F+ R + R IFE+ + HPY + WI + FE ++G ++ AR +++ A+E FL +D
Sbjct: 185 FEQRLKLFENTRLIFEKYILVHPY-IKTWIKYTKFEERLGNIENARTIFQRAIE-FLGED 242
Query: 122 HDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYGDR 181
++ EQLF+AFAKFEE KE +RAR IYK+A+D +PK RA+DL+ F FEKQ+GDR
Sbjct: 243 GND-EQLFIAFAKFEE---KYKEIERARVIYKYAIDHVPKSRAKDLFDTFTNFEKQHGDR 298
Query: 182 EGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIANVPPAE 241
GIED + GK R QYE+ ++KN NYD WFDY+++EE G E+ RE+YER+I N+PP
Sbjct: 299 IGIEDVVLGKKRFQYEEEIKKNSKNYDIWFDYLKMEEINGEIEKTREIYERSIGNLPPTN 358
Query: 242 EKRYWQRYIYLWINYALYKEVDAGDLERTRDVY--------------RTLFIFYFSFSPR 287
EK++W+RYIYLWINYAL++E+ + D+ER R VY ++I Y +F R
Sbjct: 359 EKKHWKRYIYLWINYALFEELISKDMERARSVYSECIKLIPHKEFSFSKIWILYANFEIR 418
Query: 288 M-----------------EERRIFKKYIEMELCLGNIDPCRKLYEKYLEWSPENCYAWSK 330
+ +IF +YI +E+ LGN D R LYEKYLE P+NC AW K
Sbjct: 419 QLNLDKARLIYGQAIGRNPKSKIFDQYIHLEIELGNFDRVRTLYEKYLEIMPDNCDAWCK 478
Query: 331 YTELEKSLDETERARAIFELAIAQPILDLPEFLWK 365
+ +LE L ET RARAIFELAI QP LD PE +WK
Sbjct: 479 FAQLETELGETVRARAIFELAIQQPNLDRPEVVWK 513
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 140/306 (45%), Gaps = 39/306 (12%)
Query: 56 WLSYIKFKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVE 115
++ Y ++ ++ RAR +FER + + WI +A+ EMK ++ ARN+++ AV
Sbjct: 78 YIKYAAWEESQKDLTRARSVFERFLDIDHRIPTVWIKYAEMEMKNKNINLARNIWDRAVC 137
Query: 116 IFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFE 175
+ QL+ + E+M N AR I++ + P+ +A + Y KF
Sbjct: 138 LL-----PRVSQLWFKYTFMEDMLGNYPA---ARAIFERWMQWKPEPQAWNSYLKFEQRL 189
Query: 176 KQYGDREGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIA 235
K + + RL +E + +P TW Y + EER+GN E R +++RAI
Sbjct: 190 KLFEN-----------TRLIFEKYILVHPY-IKTWIKYTKFEERLGNIENARTIFQRAIE 237
Query: 236 NVPPAEEKRYWQRYIYLWINYALYKEVDAGDLERTRDVYRTLFIFYFSFSPRMEERRIFK 295
+ E+ Q L+I +A ++E ++ER R +Y+ + P+ + +F
Sbjct: 238 FL--GEDGNDEQ----LFIAFAKFEE-KYKEIERARVIYK----YAIDHVPKSRAKDLFD 286
Query: 296 KYIEMELCLGN--------IDPCRKLYEKYLEWSPENCYAWSKYTELEKSLDETERARAI 347
+ E G+ + R YE+ ++ + +N W Y ++E+ E E+ R I
Sbjct: 287 TFTNFEKQHGDRIGIEDVVLGKKRFQYEEEIKKNSKNYDIWFDYLKMEEINGEIEKTREI 346
Query: 348 FELAIA 353
+E +I
Sbjct: 347 YERSIG 352
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 101/209 (48%), Gaps = 25/209 (11%)
Query: 52 DHEGWLSYIKFKLRYNEVQRARHIFERLVQCHPYN---------LSAWINFADFE-MKMG 101
+++ W Y+K + E+++ R I+ER + P + WIN+A FE +
Sbjct: 323 NYDIWFDYLKMEEINGEIEKTREIYERSIGNLPPTNEKKHWKRYIYLWINYALFEELISK 382
Query: 102 EVDRARNVYECAVEIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPK 161
+++RAR+VY +++ + + ++++ +A FE N D+AR IY A+ R PK
Sbjct: 383 DMERARSVYSECIKLIPHKEFSFS-KIWILYANFEIRQLNL---DKARLIYGQAIGRNPK 438
Query: 162 GRAEDLYRKFLAFEKQYGDREGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVG 221
+ ++ +++ E + G+ + ++R YE + P N D W + +LE +G
Sbjct: 439 SK---IFDQYIHLEIELGNFD--------RVRTLYEKYLEIMPDNCDAWCKFAQLETELG 487
Query: 222 NQERVREVYERAIANVPPAEEKRYWQRYI 250
R R ++E AI + W+ +I
Sbjct: 488 ETVRARAIFELAIQQPNLDRPEVVWKDFI 516
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 91/191 (47%), Gaps = 24/191 (12%)
Query: 2 IDHGRNAWDRVVTLSPRVDQ---------LWNNYIRMEENLG-NVAGARQIFERWMHWMP 51
I+ R ++R + P ++ LW NY EE + ++ AR ++ + +P
Sbjct: 340 IEKTREIYERSIGNLPPTNEKKHWKRYIYLWINYALFEELISKDMERARSVYSECIKLIP 399
Query: 52 DHEG-----WLSYIKFKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRA 106
E W+ Y F++R + +AR I+ + + +P + + + E+++G DR
Sbjct: 400 HKEFSFSKIWILYANFEIRQLNLDKARLIYGQAIGRNPKS-KIFDQYIHLEIELGNFDRV 458
Query: 107 RNVYECAVEIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAED 166
R +YE +EI + D+ D A+ KF ++ ET RAR I++ A+ + R E
Sbjct: 459 RTLYEKYLEI-MPDNCD-------AWCKFAQLETELGETVRARAIFELAIQQPNLDRPEV 510
Query: 167 LYRKFLAFEKQ 177
+++ F+ E Q
Sbjct: 511 VWKDFIDSEIQ 521
>sp|Q5K654|CLF1_PARBR Pre-mRNA-splicing factor CLF1 OS=Paracoccidioides brasiliensis
GN=CLF1 PE=3 SV=1
Length = 677
Score = 372 bits (956), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/395 (47%), Positives = 255/395 (64%), Gaps = 37/395 (9%)
Query: 2 IDHGRNAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEGWLSYIK 61
I+H RN DR VT+ RVD+LW Y+ MEE LGN+ G RQ+FERWM W PD W +YIK
Sbjct: 122 INHARNLLDRAVTIYSRVDKLWYKYVYMEEMLGNIPGTRQVFERWMSWEPDEGAWGAYIK 181
Query: 62 FKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLADD 121
+ RYNE R R IFER HP WI +A FE + G D R VY A+E D
Sbjct: 182 LEKRYNEFDRVRAIFERFTVVHP-EPKNWIKWARFEEEYGTSDMVREVYGLAIETLGEDF 240
Query: 122 HDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYGDR 181
DE +LF+A+A++E KE +RAR IYK+ALDR+P+ ++ L++ + FEKQ+GDR
Sbjct: 241 MDE--KLFIAYARYE---AKLKEFERARAIYKYALDRLPRAKSVALHKAYTTFEKQFGDR 295
Query: 182 EGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIANVPPAE 241
EG+ED I K R+QYE+ +++NP NYD WFD++RLEE G+ ERVR+VYERAIA +PP++
Sbjct: 296 EGVEDVILSKRRVQYEEQIKENPKNYDIWFDFVRLEESSGDVERVRDVYERAIAQMPPSQ 355
Query: 242 EKRYWQRYIYLWINYALYKEVDAGDLERTRDVYR--------------TLFIFYFSFSPR 287
EKR+W+RYIYLWI YAL++E++A D+ER +Y+ +++ F R
Sbjct: 356 EKRHWRRYIYLWIFYALWEELEAKDMERAHQIYQECIRLIPHKKFTFAKIWLMKAQFEIR 415
Query: 288 M-----------------EERRIFKKYIEMELCLGNIDPCRKLYEKYLEWSPENCYAWSK 330
+ ++FK YI++E L CRKL+EK +EWSP NC AW K
Sbjct: 416 QMDLQAARKTLGHAIGACPKDKLFKGYIDLERQLFEFVRCRKLFEKQIEWSPSNCQAWIK 475
Query: 331 YTELEKSLDETERARAIFELAIAQPILDLPEFLWK 365
+ ELE+ LD+ +RARAI+EL I+QP+LD+PE LWK
Sbjct: 476 FAELERGLDDIDRARAIYELGISQPVLDMPELLWK 510
Score = 89.4 bits (220), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 141/310 (45%), Gaps = 43/310 (13%)
Query: 55 GWLSYIKFKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAV 114
W+ Y +++L E +RAR +FER + P + WI + + EMK ++ ARN+ + AV
Sbjct: 74 NWMRYAQWELEQKEFRRARSVFERALDVDPTAVVLWIRYIEAEMKTRNINHARNLLDRAV 133
Query: 115 EIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAF 174
I+ ++L+ + EEM N T R +++ + P E + ++
Sbjct: 134 TIY-----SRVDKLWYKYVYMEEMLGNIPGT---RQVFERWMSWEPD---EGAWGAYIKL 182
Query: 175 EKQYGDREGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAI 234
EK+Y + + + AI + + V P N W + R EE G + VREVY AI
Sbjct: 183 EKRYNEFDRVR-AIFERFTV-----VHPEPKN---WIKWARFEEEYGTSDMVREVYGLAI 233
Query: 235 ANVPP--AEEKRYWQRYIYLWINYALYKEVDAGDLERTRDVYRTLFIFYFSFSPRMEERR 292
+ +EK L+I YA Y E + ER R +Y+ + PR +
Sbjct: 234 ETLGEDFMDEK--------LFIAYARY-EAKLKEFERARAIYK----YALDRLPRAKSVA 280
Query: 293 IFKKYIEMELCLGN--------IDPCRKLYEKYLEWSPENCYAWSKYTELEKSLDETERA 344
+ K Y E G+ + R YE+ ++ +P+N W + LE+S + ER
Sbjct: 281 LHKAYTTFEKQFGDREGVEDVILSKRRVQYEEQIKENPKNYDIWFDFVRLEESSGDVERV 340
Query: 345 RAIFELAIAQ 354
R ++E AIAQ
Sbjct: 341 RDVYERAIAQ 350
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
Query: 190 GKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIANVPPAEEKRYWQRY 249
G+ R ++ED VR+N ++ + W Y + E R R V+ERA+ P A
Sbjct: 55 GRKRKEFEDYVRRNRISMNNWMRYAQWELEQKEFRRARSVFERALDVDPTA--------- 105
Query: 250 IYLWINYALYKEVDAGDLERTRDVYRTLFIFYFSFSPRMEERRIFKKYIEMELCLGNIDP 309
+ LWI Y + E+ ++ R++ Y +++ KY+ ME LGNI
Sbjct: 106 VVLWIRY-IEAEMKTRNINHARNLLDRAVTIYSRVD------KLWYKYVYMEEMLGNIPG 158
Query: 310 CRKLYEKYLEWSPENCYAWSKYTELEKSLDETERARAIFE-LAIAQP 355
R+++E+++ W P+ AW Y +LEK +E +R RAIFE + P
Sbjct: 159 TRQVFERWMSWEPDEG-AWGAYIKLEKRYNEFDRVRAIFERFTVVHP 204
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 6/139 (4%)
Query: 21 QLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEGWLSYIKFKLRYNEVQRARHIFERLV 80
++W + E ++ AR+ + P + + YI + + E R R +FE+ +
Sbjct: 404 KIWLMKAQFEIRQMDLQAARKTLGHAIGACPKDKLFKGYIDLERQLFEFVRCRKLFEKQI 463
Query: 81 QCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLADDHDEAEQLFVAFAKFEEMGC 140
+ P N AWI FA+ E + ++DRAR +YE + + D E L+ ++ FEE
Sbjct: 464 EWSPSNCQAWIKFAELERGLDDIDRARAIYELGISQPVL---DMPELLWKSYIDFEEYEG 520
Query: 141 NCKETDRARCIYKFALDRI 159
E DR R +Y+ L++
Sbjct: 521 ---EYDRTRALYERLLEKT 536
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 116/276 (42%), Gaps = 46/276 (16%)
Query: 1 FIDHGRNAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHE---GWL 57
+ R ++ + +P+ +W +++R+EE+ G+V R ++ER + MP + W
Sbjct: 302 ILSKRRVQYEEQIKENPKNYDIWFDFVRLEESSGDVERVRDVYERAIAQMPPSQEKRHWR 361
Query: 58 SYIKF--------KLRYNEVQRARHIFERLVQCHPYN----LSAWINFADFEMKMGEVDR 105
YI +L +++RA I++ ++ P+ W+ A FE++ ++
Sbjct: 362 RYIYLWIFYALWEELEAKDMERAHQIYQECIRLIPHKKFTFAKIWLMKAQFEIRQMDLQA 421
Query: 106 ARNVYECAVEIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAE 165
AR A+ D +LF + E E R R +++ ++ P
Sbjct: 422 ARKTLGHAIGACPKD------KLFKGYIDLER---QLFEFVRCRKLFEKQIEWSPSNC-- 470
Query: 166 DLYRKFLAFEKQYGDREGIEDAIAGKMRLQYEDGVRKNPMNYD--TWFDYIRLEERVGNQ 223
+ KF E+ G++D + R YE G+ + ++ W YI EE G
Sbjct: 471 QAWIKFAELER------GLDDI--DRARAIYELGISQPVLDMPELLWKSYIDFEEYEGEY 522
Query: 224 ERVREVYERAIANVPPAEEKRYWQRYIYLWINYALY 259
+R R +YER + ++ +WIN+A +
Sbjct: 523 DRTRALYERLLEKT----------NHVKVWINFARF 548
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 135/318 (42%), Gaps = 44/318 (13%)
Query: 20 DQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEGWL---SYIKFKLRYNE-------- 68
++L+ Y R E L AR I++ + +P + +Y F+ ++ +
Sbjct: 243 EKLFIAYARYEAKLKEFERARAIYKYALDRLPRAKSVALHKAYTTFEKQFGDREGVEDVI 302
Query: 69 VQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLADDHDEAEQ- 127
+ + R +E ++ +P N W +F E G+V+R R+VYE A+ +
Sbjct: 303 LSKRRVQYEEQIKENPKNYDIWFDFVRLEESSGDVERVRDVYERAIAQMPPSQEKRHWRR 362
Query: 128 ---LFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYGDREGI 184
L++ +A +EE+ K+ +RA IY+ + IP + + K + Q+ R+
Sbjct: 363 YIYLWIFYALWEEL--EAKDMERAHQIYQECIRLIPHKKF--TFAKIWLMKAQFEIRQM- 417
Query: 185 EDAIAGKMRLQYEDGVRKNPMNYDTWFD-YIRLEERVGNQERVREVYERAIANVPPAEEK 243
D A + L + G D F YI LE ++ R R+++E+ I P
Sbjct: 418 -DLQAARKTLGHAIGA----CPKDKLFKGYIDLERQLFEFVRCRKLFEKQIEWSPSN--- 469
Query: 244 RYWQRYIYLWINYALYKEVDAG--DLERTRDVYRTLFIFYFSFSPRMEERRIFKKYIEME 301
WI +A E++ G D++R R +Y P + ++K YI+ E
Sbjct: 470 ------CQAWIKFA---ELERGLDDIDRARAIYELGISQPVLDMPEL----LWKSYIDFE 516
Query: 302 LCLGNIDPCRKLYEKYLE 319
G D R LYE+ LE
Sbjct: 517 EYEGEYDRTRALYERLLE 534
>sp|Q4WT84|CLF1_ASPFU Pre-mRNA-splicing factor clf1 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=clf1 PE=3
SV=1
Length = 676
Score = 369 bits (946), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/395 (47%), Positives = 254/395 (64%), Gaps = 37/395 (9%)
Query: 2 IDHGRNAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEGWLSYIK 61
I+H RN DR VT+ PRVD+ W Y+ MEE LGN+ G RQ+FERWM W PD W +YIK
Sbjct: 122 INHARNLLDRAVTILPRVDKFWYKYVYMEETLGNIQGTRQVFERWMSWEPDEGAWSAYIK 181
Query: 62 FKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLADD 121
+ RYNE +RAR IF+R HP WI +A FE + G D R VY A+E D
Sbjct: 182 LEKRYNEFERARAIFQRFTIVHP-EPRNWIKWARFEEEYGTSDLVREVYGMAIETLGEDF 240
Query: 122 HDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYGDR 181
DE +LF+A+AKFE KE +RAR IYK+ALDR+P+ +A L++ + FEKQ+GDR
Sbjct: 241 MDE--KLFIAYAKFE---AKLKEYERARAIYKYALDRLPRSKAMALHKAYTTFEKQFGDR 295
Query: 182 EGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIANVPPAE 241
EG+ED I K R+QYE+ +++NP NYD WFD+ RLEE G+ +RVR++YERAIA +PP++
Sbjct: 296 EGVEDVILSKRRVQYEEQLKENPRNYDVWFDFARLEETSGDPDRVRDIYERAIAQIPPSQ 355
Query: 242 EKRYWQRYIYLWINYALYKEVDAGDLERTRDVYR--------------TLFIFYFSFSPR 287
EKR+W+RYIYLWI YA+++E++A D++R R +Y +++ F R
Sbjct: 356 EKRHWRRYIYLWIFYAIWEEMEAKDVDRARQIYTECLKLIPHKKFTFAKIWLLKAQFDIR 415
Query: 288 M-----------------EERRIFKKYIEMELCLGNIDPCRKLYEKYLEWSPENCYAWSK 330
+ ++F+ YI++E L CR LYEK +EW+P N +W K
Sbjct: 416 QMDLQAARKTLGQAIGMCPKDKLFRGYIDLERQLFEFVRCRTLYEKQIEWNPANSQSWIK 475
Query: 331 YTELEKSLDETERARAIFELAIAQPILDLPEFLWK 365
Y ELE+ LD++ERARAIFEL I QP+LD+PE +WK
Sbjct: 476 YAELERGLDDSERARAIFELGIDQPMLDMPELVWK 510
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 138/310 (44%), Gaps = 43/310 (13%)
Query: 55 GWLSYIKFKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAV 114
W+ Y ++L E +RAR IFER + +P ++ WI + + EM+ ++ ARN+ + AV
Sbjct: 74 NWMRYASWELEQKEFRRARSIFERALDVNPTSVVLWIRYIESEMRNRNINHARNLLDRAV 133
Query: 115 EIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAF 174
I D + + + EE N + T R +++ + P E + ++
Sbjct: 134 TILPRVD-----KFWYKYVYMEETLGNIQGT---RQVFERWMSWEPD---EGAWSAYIKL 182
Query: 175 EKQYGDREGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAI 234
EK+Y + E AI + + V P N W + R EE G + VREVY AI
Sbjct: 183 EKRYNEFERAR-AIFQRFTI-----VHPEPRN---WIKWARFEEEYGTSDLVREVYGMAI 233
Query: 235 ANVPP--AEEKRYWQRYIYLWINYALYKEVDAGDLERTRDVYRTLFIFYFSFSPRMEERR 292
+ +EK L+I YA + E + ER R +Y+ + PR +
Sbjct: 234 ETLGEDFMDEK--------LFIAYAKF-EAKLKEYERARAIYK----YALDRLPRSKAMA 280
Query: 293 IFKKYIEMELCLGN--------IDPCRKLYEKYLEWSPENCYAWSKYTELEKSLDETERA 344
+ K Y E G+ + R YE+ L+ +P N W + LE++ + +R
Sbjct: 281 LHKAYTTFEKQFGDREGVEDVILSKRRVQYEEQLKENPRNYDVWFDFARLEETSGDPDRV 340
Query: 345 RAIFELAIAQ 354
R I+E AIAQ
Sbjct: 341 RDIYERAIAQ 350
Score = 82.0 bits (201), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 86/167 (51%), Gaps = 18/167 (10%)
Query: 190 GKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIANVPPAEEKRYWQRY 249
G+ R ++ED VR+N +N + W Y E R R ++ERA+ P +
Sbjct: 55 GRKRKEFEDYVRRNRLNMNNWMRYASWELEQKEFRRARSIFERALDVNPTS--------- 105
Query: 250 IYLWINYALYKEVDAGDLERTRDVYRTLFIFYFSFSPRMEERRIFKKYIEMELCLGNIDP 309
+ LWI Y +++ R + R L + PR++ + + KY+ ME LGNI
Sbjct: 106 VVLWIRY-----IESEMRNRNINHARNLLDRAVTILPRVD--KFWYKYVYMEETLGNIQG 158
Query: 310 CRKLYEKYLEWSPENCYAWSKYTELEKSLDETERARAIFE-LAIAQP 355
R+++E+++ W P+ AWS Y +LEK +E ERARAIF+ I P
Sbjct: 159 TRQVFERWMSWEPDEG-AWSAYIKLEKRYNEFERARAIFQRFTIVHP 204
Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 109/262 (41%), Gaps = 46/262 (17%)
Query: 16 SPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHE---GWLSYIKF--------KL 64
+PR +W ++ R+EE G+ R I+ER + +P + W YI ++
Sbjct: 317 NPRNYDVWFDFARLEETSGDPDRVRDIYERAIAQIPPSQEKRHWRRYIYLWIFYAIWEEM 376
Query: 65 RYNEVQRARHIFERLVQCHPYN----LSAWINFADFEMKMGEVDRARNVYECAVEIFLAD 120
+V RAR I+ ++ P+ W+ A F+++ ++ AR A+ + D
Sbjct: 377 EAKDVDRARQIYTECLKLIPHKKFTFAKIWLLKAQFDIRQMDLQAARKTLGQAIGMCPKD 436
Query: 121 DHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYGD 180
+LF + E E R R +Y+ ++ P + K+ E+ D
Sbjct: 437 ------KLFRGYIDLER---QLFEFVRCRTLYEKQIEWNPANSQS--WIKYAELERGLDD 485
Query: 181 REGIEDAIAGKMRLQYEDGVRKNPMNYD--TWFDYIRLEERVGNQERVREVYERAIANVP 238
E + R +E G+ + ++ W YI EE G +RVR++YER +
Sbjct: 486 SE--------RARAIFELGIDQPMLDMPELVWKAYIDFEEYEGEYDRVRQLYERLLQKTD 537
Query: 239 PAEEKRYWQRYIYLWINYALYK 260
++ +WINYA ++
Sbjct: 538 ----------HVKVWINYARFE 549
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 75/162 (46%), Gaps = 10/162 (6%)
Query: 2 IDHGRNAWDRVVTLSPRVD----QLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEGWL 57
+D R + + L P ++W + + ++ AR+ + + P + +
Sbjct: 381 VDRARQIYTECLKLIPHKKFTFAKIWLLKAQFDIRQMDLQAARKTLGQAIGMCPKDKLFR 440
Query: 58 SYIKFKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIF 117
YI + + E R R ++E+ ++ +P N +WI +A+ E + + +RAR ++E ++
Sbjct: 441 GYIDLERQLFEFVRCRTLYEKQIEWNPANSQSWIKYAELERGLDDSERARAIFELGIDQP 500
Query: 118 LADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRI 159
+ D E ++ A+ FEE E DR R +Y+ L +
Sbjct: 501 ML---DMPELVWKAYIDFEEYEG---EYDRVRQLYERLLQKT 536
>sp|Q5BDX1|CLF1_EMENI Pre-mRNA-splicing factor clf1 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=clf1
PE=3 SV=2
Length = 673
Score = 366 bits (940), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/395 (48%), Positives = 255/395 (64%), Gaps = 37/395 (9%)
Query: 2 IDHGRNAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEGWLSYIK 61
I+H RN DR VT+ PRVD+LW Y+ MEE LGN+ G RQ+FERWM W PD W +YIK
Sbjct: 122 INHARNLLDRAVTILPRVDKLWYKYVYMEETLGNIPGTRQVFERWMSWEPDEGAWSAYIK 181
Query: 62 FKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLADD 121
+ RYNE +RAR IF+R HP WI +A FE + G D R VY AVE D
Sbjct: 182 LEKRYNEFERARAIFQRFTIVHP-EPRNWIKWARFEEEYGTSDLVREVYGLAVETLGEDF 240
Query: 122 HDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYGDR 181
DE +LF+A+A+FE KE +RAR IYK+ALDR+P+ ++ L++ + FEKQ+GDR
Sbjct: 241 MDE--KLFIAYARFE---TKLKEYERARAIYKYALDRLPRSKSITLHKAYTTFEKQFGDR 295
Query: 182 EGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIANVPPAE 241
EG+E+ I K R+QYE+ +++N NYD WFD+ RLEE+ G+ ERVR+VYERAIA +PP++
Sbjct: 296 EGVENVILAKRRVQYEEQLKENLRNYDVWFDFARLEEQSGDPERVRDVYERAIAQIPPSQ 355
Query: 242 EKRYWQRYIYLWINYALYKEVDAGDLERTRDVYRTLFIFY----FSFS------PRMEER 291
EKR+W+RYIYLWI YAL++E++A D++R R VY F+F+ + E R
Sbjct: 356 EKRHWRRYIYLWIFYALWEEMEAKDIDRARQVYTECLKLIPHKKFTFAKVWLMKAQFEVR 415
Query: 292 ---------------------RIFKKYIEMELCLGNIDPCRKLYEKYLEWSPENCYAWSK 330
++F+ YI++E L CR LYEK +EW+P N +W +
Sbjct: 416 QLNLQAARKTLGQAIGMCPKDKLFRGYIDLERQLFEFVRCRTLYEKQIEWNPSNSQSWIQ 475
Query: 331 YTELEKSLDETERARAIFELAIAQPILDLPEFLWK 365
Y ELE+ LD+TERARAI+EL I QP LD+PE +WK
Sbjct: 476 YAELERGLDDTERARAIYELGIDQPTLDMPELVWK 510
Score = 78.6 bits (192), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 87/171 (50%), Gaps = 26/171 (15%)
Query: 190 GKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAI----ANVPPAEEKRY 245
G+ R ++ED VR+N +N + W Y E R R ++ERA+ +VP
Sbjct: 55 GRKRKEFEDYVRRNRINMNNWMRYAAWELEQKEFRRARSIFERALDVDSTSVP------- 107
Query: 246 WQRYIYLWINYALYKEVDAGDLERTRDVYRTLFIFYFSFSPRMEERRIFKKYIEMELCLG 305
LWI Y +++ R + R L + PR++ +++ KY+ ME LG
Sbjct: 108 ------LWIRY-----IESEMRNRNINHARNLLDRAVTILPRVD--KLWYKYVYMEETLG 154
Query: 306 NIDPCRKLYEKYLEWSPENCYAWSKYTELEKSLDETERARAIFE-LAIAQP 355
NI R+++E+++ W P+ AWS Y +LEK +E ERARAIF+ I P
Sbjct: 155 NIPGTRQVFERWMSWEPDEG-AWSAYIKLEKRYNEFERARAIFQRFTIVHP 204
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 134/310 (43%), Gaps = 43/310 (13%)
Query: 55 GWLSYIKFKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAV 114
W+ Y ++L E +RAR IFER + ++ WI + + EM+ ++ ARN+ + AV
Sbjct: 74 NWMRYAAWELEQKEFRRARSIFERALDVDSTSVPLWIRYIESEMRNRNINHARNLLDRAV 133
Query: 115 EIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAF 174
I D +L+ + EE N T R +++ + P E + ++
Sbjct: 134 TILPRVD-----KLWYKYVYMEETLGNIPGT---RQVFERWMSWEPD---EGAWSAYIKL 182
Query: 175 EKQYGDREGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAI 234
EK+Y + E AI + + V P N W + R EE G + VREVY A+
Sbjct: 183 EKRYNEFERAR-AIFQRFTI-----VHPEPRN---WIKWARFEEEYGTSDLVREVYGLAV 233
Query: 235 ANVPP--AEEKRYWQRYIYLWINYALYKEVDAGDLERTRDVYRTLFIFYFSFSPRMEERR 292
+ +EK L+I YA + E + ER R +Y+ + PR +
Sbjct: 234 ETLGEDFMDEK--------LFIAYARF-ETKLKEYERARAIYK----YALDRLPRSKSIT 280
Query: 293 IFKKYIEMELCLGNIDPC--------RKLYEKYLEWSPENCYAWSKYTELEKSLDETERA 344
+ K Y E G+ + R YE+ L+ + N W + LE+ + ER
Sbjct: 281 LHKAYTTFEKQFGDREGVENVILAKRRVQYEEQLKENLRNYDVWFDFARLEEQSGDPERV 340
Query: 345 RAIFELAIAQ 354
R ++E AIAQ
Sbjct: 341 RDVYERAIAQ 350
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 105/255 (41%), Gaps = 49/255 (19%)
Query: 22 LWNNYIRMEENLGNVAGARQIFERWMHWMPDHE---GWLSYIKF--------KLRYNEVQ 70
+W ++ R+EE G+ R ++ER + +P + W YI ++ ++
Sbjct: 323 VWFDFARLEEQSGDPERVRDVYERAIAQIPPSQEKRHWRRYIYLWIFYALWEEMEAKDID 382
Query: 71 RARHIFERLVQCHPYN----LSAWINFADFEMKMGEVDRARNVYECAVEIFLADDH---- 122
RAR ++ ++ P+ W+ A FE++ + AR A+ + D
Sbjct: 383 RARQVYTECLKLIPHKKFTFAKVWLMKAQFEVRQLNLQAARKTLGQAIGMCPKDKLFRGY 442
Query: 123 -DEAEQLF--------------------VAFAKFEEMGCNCKETDRARCIYKFALDRIPK 161
D QLF ++ ++ E+ +T+RAR IY+ +D+
Sbjct: 443 IDLERQLFEFVRCRTLYEKQIEWNPSNSQSWIQYAELERGLDDTERARAIYELGIDQPTL 502
Query: 162 GRAEDLYRKFLAFEKQYGDREGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVG 221
E +++ ++ FE G+ E + R YE ++K + W +Y R E V
Sbjct: 503 DMPELVWKAYIDFEDDEGEYE--------RERQLYERLLQKTD-HVKVWINYARFEINVP 553
Query: 222 NQERVREVYERAIAN 236
++E E ER I++
Sbjct: 554 DEEEEEEEEERPISD 568
>sp|Q527H0|CLF1_MAGO7 Pre-mRNA-splicing factor CLF1 OS=Magnaporthe oryzae (strain 70-15 /
ATCC MYA-4617 / FGSC 8958) GN=CLF1 PE=3 SV=1
Length = 691
Score = 345 bits (886), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 186/397 (46%), Positives = 245/397 (61%), Gaps = 38/397 (9%)
Query: 2 IDHGRNAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEGWLSYIK 61
I+ RN DR VT PRVD+LW Y+ +EE LGN+ G RQ+FERWM W PD W ++IK
Sbjct: 122 INFARNLLDRAVTHLPRVDKLWYKYVWVEEMLGNIPGVRQVFERWMEWQPDEAAWSAFIK 181
Query: 62 FKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLADD 121
+ RY E RAR IF R HP WI ++ FE + G DR R V+E A+E L+
Sbjct: 182 LEQRYGEYDRAREIFTRFTMVHP-EPRNWIKWSKFEEEYGTSDRVREVFERAIEE-LSKY 239
Query: 122 HDE--AEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYG 179
DE E+LF+A+A++E + DRAR IYKF L+ +P+ +A L++++ FEKQYG
Sbjct: 240 GDEFVEERLFIAYARYE---AKLHDLDRARAIYKFGLENLPRSKAMLLHKEYTTFEKQYG 296
Query: 180 DREGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIANVPP 239
DREG+ED + K R YED VR+NP NYD WFDY RLEE G+ +R REVYE+AIA VPP
Sbjct: 297 DREGVEDVVLSKRRRHYEDLVRENPKNYDVWFDYARLEEASGDIDRTREVYEKAIAQVPP 356
Query: 240 AEEKRYWQRYIYLWINYALYKEVDAGDLERTRDVYRTLF------IFYFS--------FS 285
+ KR+W+RYIYLWI +AL++E +A + ER R VY T F F+ F
Sbjct: 357 TQAKRHWRRYIYLWIFFALWEETEAKNPERARQVYDTCLKLIPHRTFTFAKVWMHKAHFE 416
Query: 286 PRM-----------------EERRIFKKYIEMELCLGNIDPCRKLYEKYLEWSPENCYAW 328
R + R+FK YIEME L CR LYEK++ ++P NC W
Sbjct: 417 IRQGDLAAARKTLGRAIGMCPKDRLFKGYIEMEQKLYEFGRCRILYEKHIAYNPANCSTW 476
Query: 329 SKYTELEKSLDETERARAIFELAIAQPILDLPEFLWK 365
K+ ELE+ LD+ +RARAI ++ IAQP+LD+PE +WK
Sbjct: 477 VKWAELERGLDDLDRARAILDMGIAQPVLDMPEVVWK 513
Score = 92.0 bits (227), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 145/311 (46%), Gaps = 40/311 (12%)
Query: 54 EGWLSYIKFKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECA 113
+ WL Y +++L E R+R +FER + H ++ WI + + E+K ++ ARN+ + A
Sbjct: 73 KNWLQYAQWELEQKEYARSRSVFERALNLHANKVTLWIRYVEAELKSRNINFARNLLDRA 132
Query: 114 VEIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLA 173
V D +L+ + EEM N R +++ ++ P E + F+
Sbjct: 133 VTHLPRVD-----KLWYKYVWVEEMLGNIPGV---RQVFERWMEWQPD---EAAWSAFIK 181
Query: 174 FEKQYGDREGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERA 233
E++YG+ + + I + + V P N W + + EE G +RVREV+ERA
Sbjct: 182 LEQRYGEYDRARE-IFTRFTM-----VHPEPRN---WIKWSKFEEEYGTSDRVREVFERA 232
Query: 234 IANVPPAEEKRYWQRYI--YLWINYALYKEVDAGDLERTRDVYRTLFIFYFSFSPRMEER 291
I + +Y ++ L+I YA Y E DL+R R +Y+ F PR +
Sbjct: 233 IEEL-----SKYGDEFVEERLFIAYARY-EAKLHDLDRARAIYK----FGLENLPRSKAM 282
Query: 292 RIFKKYIEMELCLGN--------IDPCRKLYEKYLEWSPENCYAWSKYTELEKSLDETER 343
+ K+Y E G+ + R+ YE + +P+N W Y LE++ + +R
Sbjct: 283 LLHKEYTTFEKQYGDREGVEDVVLSKRRRHYEDLVRENPKNYDVWFDYARLEEASGDIDR 342
Query: 344 ARAIFELAIAQ 354
R ++E AIAQ
Sbjct: 343 TREVYEKAIAQ 353
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 81/159 (50%), Gaps = 17/159 (10%)
Query: 190 GKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIANVPPAEEKRYWQRY 249
G+ R ++E +++ N W Y + E R R V+ERA+ N+ +
Sbjct: 55 GRKRKEFESYCQRSGFNLKNWLQYAQWELEQKEYARSRSVFERAL-NLHANK-------- 105
Query: 250 IYLWINYALYKEVDAGDLERTRDVYRTLFIFYFSFSPRMEERRIFKKYIEMELCLGNIDP 309
+ LWI Y V+A R + R L + PR++ +++ KY+ +E LGNI
Sbjct: 106 VTLWIRY-----VEAELKSRNINFARNLLDRAVTHLPRVD--KLWYKYVWVEEMLGNIPG 158
Query: 310 CRKLYEKYLEWSPENCYAWSKYTELEKSLDETERARAIF 348
R+++E+++EW P+ AWS + +LE+ E +RAR IF
Sbjct: 159 VRQVFERWMEWQPDEA-AWSAFIKLEQRYGEYDRAREIF 196
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 141/336 (41%), Gaps = 49/336 (14%)
Query: 20 DQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEGWL---SYIKFKLRYNE-------- 68
++L+ Y R E L ++ AR I++ + +P + L Y F+ +Y +
Sbjct: 246 ERLFIAYARYEAKLHDLDRARAIYKFGLENLPRSKAMLLHKEYTTFEKQYGDREGVEDVV 305
Query: 69 -VQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLADDHDEAEQ 127
+R RH +E LV+ +P N W ++A E G++DR R VYE A+ +
Sbjct: 306 LSKRRRH-YEDLVRENPKNYDVWFDYARLEEASGDIDRTREVYEKAIAQVPPTQAKRHWR 364
Query: 128 ----LFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAE--DLYRKFLAFEKQYGDR 181
L++ FA +EE K +RAR +Y L IP ++ FE + GD
Sbjct: 365 RYIYLWIFFALWEE--TEAKNPERARQVYDTCLKLIPHRTFTFAKVWMHKAHFEIRQGDL 422
Query: 182 EGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIANVPPAE 241
+ + + +D + K YI +E+++ R R +YE+ IA P
Sbjct: 423 AAARKTLGRAIGMCPKDRLFKG---------YIEMEQKLYEFGRCRILYEKHIAYNPAN- 472
Query: 242 EKRYWQRYIYLWINYALYKEVDAG--DLERTRDVYRTLFIFYFSFSPRMEERRIFKKYIE 299
W+ +A E++ G DL+R R + P + ++K YI+
Sbjct: 473 --------CSTWVKWA---ELERGLDDLDRARAILDMGIAQPVLDMPEV----VWKSYID 517
Query: 300 MELCLGNIDPCRKLYEKYLEWSPENCYAWSKYTELE 335
E G D R LYE+ L+ ++ W Y + E
Sbjct: 518 FEEEEGEYDKTRSLYERLLD-KADHPKVWISYAQFE 552
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 76/160 (47%), Gaps = 10/160 (6%)
Query: 3 DHGRNAWDRVVTLSPR----VDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEGWLS 58
+ R +D + L P ++W + E G++A AR+ R + P +
Sbjct: 385 ERARQVYDTCLKLIPHRTFTFAKVWMHKAHFEIRQGDLAAARKTLGRAIGMCPKDRLFKG 444
Query: 59 YIKFKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFL 118
YI+ + + E R R ++E+ + +P N S W+ +A+ E + ++DRAR + + + +
Sbjct: 445 YIEMEQKLYEFGRCRILYEKHIAYNPANCSTWVKWAELERGLDDLDRARAILDMGIAQPV 504
Query: 119 ADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDR 158
D E ++ ++ FEE E D+ R +Y+ LD+
Sbjct: 505 L---DMPEVVWKSYIDFEE---EEGEYDKTRSLYERLLDK 538
>sp|P0CO10|CLF1_CRYNJ Pre-mRNA-splicing factor CLF1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=CLF1 PE=3 SV=1
Length = 726
Score = 336 bits (862), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 181/405 (44%), Positives = 249/405 (61%), Gaps = 44/405 (10%)
Query: 2 IDHGRNAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEGWLSYIK 61
I+H RN +DR +TL PRVD LW Y+ +EE L NV+GARQIFERWM W P+ + W SYIK
Sbjct: 125 INHARNLFDRAITLLPRVDALWYKYVYLEELLLNVSGARQIFERWMQWEPNDKAWQSYIK 184
Query: 62 FKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLADD 121
+ RYNE+ RA I+ER + C P + W+ +A FE G+ D+AR V++ A+E F D+
Sbjct: 185 LEERYNELDRASAIYERWIACRPIPKN-WVTWAKFEEDRGQPDKAREVFQTALE-FFGDE 242
Query: 122 HDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYGDR 181
++ E+ FA F M KE +RAR IYKFAL R+P+ ++ LY ++ FEKQ+GDR
Sbjct: 243 EEQVEKAQSVFAAFARMETRLKEFERARVIYKFALARLPRSKSASLYAQYTKFEKQHGDR 302
Query: 182 EGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEE---RVGNQE-------RVREVYE 231
G+E + GK R+QYE+ + +P NYD WF RLEE R ++ RVREVYE
Sbjct: 303 AGVELTVLGKRRIQYEEELAYDPTNYDAWFSLARLEEDAYRADREDGEDVEPMRVREVYE 362
Query: 232 RAIANVPPAEEKRYWQRYIYLWINYALYKEVDAGDLERTRDVYRT--------------L 277
RA+ANVPPA EKRYW+RYIYLW+ YA ++E+D D +R RDVY+ L
Sbjct: 363 RAVANVPPALEKRYWRRYIYLWLQYAAFEEIDTKDYDRARDVYKAAVKLVPHKTFTFAKL 422
Query: 278 FIFYFSFSPRM-----------------EERRIFKKYIEMELCLGNIDPCRKLYEKYLEW 320
++ Y F R + ++F YIE+E+ L D R LYEK+L +
Sbjct: 423 WLAYAYFEIRRLDVSAARKVLGAGIGMCPKPKLFTGYIELEMRLREFDRVRTLYEKFLTY 482
Query: 321 SPENCYAWSKYTELEKSLDETERARAIFELAIAQPILDLPEFLWK 365
P AW ++T++E ++++ ER RAIFELA+ Q LD+PE +WK
Sbjct: 483 DPSLSSAWIQWTQVESAVEDFERVRAIFELAVQQS-LDMPEIVWK 526
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 125/301 (41%), Gaps = 71/301 (23%)
Query: 55 GWLSYIKFKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAV 114
W Y +++ NE +R+R +FER + P ++ WI + D E+K ++ ARN+++ A+
Sbjct: 77 AWTKYAQWEASQNEYERSRSVFERALDVDPRSVDLWIKYTDMELKARNINHARNLFDRAI 136
Query: 115 EIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAF 174
+ D L+ + EE+ N A ++ +++ +
Sbjct: 137 TLLPRVDA-----LWYKYVYLEELLLNV-------------------SGARQIFERWMQW 172
Query: 175 EKQYGDREGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAI 234
E N W YI+LEER +R +YER I
Sbjct: 173 EP-----------------------------NDKAWQSYIKLEERYNELDRASAIYERWI 203
Query: 235 ANVPPAEEKRYWQRYIYLWINYALYKEVDAGDLERTRDVYRTLFIFYFSFSPRMEE-RRI 293
A P + W+ +A ++E D G ++ R+V++T F+ ++E+ + +
Sbjct: 204 ACRPIPKN----------WVTWAKFEE-DRGQPDKAREVFQTALEFFGDEEEQVEKAQSV 252
Query: 294 FKKYIEMELCLGNIDPCRKLYEKYLEWSPENCYA--WSKYTELEKSLDETERARAIFELA 351
F + ME L + R +Y+ L P + A +++YT+ EK + RA EL
Sbjct: 253 FAAFARMETRLKEFERARVIYKFALARLPRSKSASLYAQYTKFEKQHGD----RAGVELT 308
Query: 352 I 352
+
Sbjct: 309 V 309
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 90/203 (44%), Gaps = 28/203 (13%)
Query: 2 IDHGRNAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPD-HEGWLSYI 60
+ R + + P+ +L+ YI +E L R ++E+++ + P W+ +
Sbjct: 436 VSAARKVLGAGIGMCPK-PKLFTGYIELEMRLREFDRVRTLYEKFLTYDPSLSSAWIQWT 494
Query: 61 KFKLRYNEVQRARHIFERLVQCHPYNLS--AWINFADFEMKMGEVDRARNVYECAVEIFL 118
+ + + +R R IFE VQ ++ W + DFE GE +RARN+YE +E
Sbjct: 495 QVESAVEDFERVRAIFELAVQ-QSLDMPEIVWKAYIDFEAGEGERERARNLYERLLE--- 550
Query: 119 ADDHDEAEQLFVAFAKFE-------------EMGCNCKETDRARCIYKFAL-DRIPKGRA 164
++++++A E E+ + D AR +++ D KG
Sbjct: 551 ---RTSHVKVWISYALMEIATLGGGEDEDGNEIEGEAGDADLARQVFERGYKDLRAKGEK 607
Query: 165 ED---LYRKFLAFEKQYGDREGI 184
ED L + +FE+++GD E +
Sbjct: 608 EDRAVLLESWKSFEQEHGDEETL 630
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 129/321 (40%), Gaps = 82/321 (25%)
Query: 22 LWNNYIRMEENLGN-------VAGARQI-FERWMHWMP-DHEGWLSYIKFK---LRYN-- 67
L+ Y + E+ G+ V G R+I +E + + P +++ W S + + R +
Sbjct: 288 LYAQYTKFEKQHGDRAGVELTVLGKRRIQYEEELAYDPTNYDAWFSLARLEEDAYRADRE 347
Query: 68 -----EVQRARHIFERLVQCHPYNLSA---------WINFADFE-MKMGEVDRARNVYEC 112
E R R ++ER V P L W+ +A FE + + DRAR+VY+
Sbjct: 348 DGEDVEPMRVREVYERAVANVPPALEKRYWRRYIYLWLQYAAFEEIDTKDYDRARDVYKA 407
Query: 113 AVEIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPK----------- 161
AV++ A +L++A+A FE + AR + + PK
Sbjct: 408 AVKLVPHKTFTFA-KLWLAYAYFE---IRRLDVSAARKVLGAGIGMCPKPKLFTGYIELE 463
Query: 162 ------GRAEDLYRKFLAFEKQYGDR----EGIEDAIAG--KMRLQYEDGVRKN-PMNYD 208
R LY KFL ++ +E A+ ++R +E V+++ M
Sbjct: 464 MRLREFDRVRTLYEKFLTYDPSLSSAWIQWTQVESAVEDFERVRAIFELAVQQSLDMPEI 523
Query: 209 TWFDYIRLEERVGNQERVREVYERAIANVPPAEEKRYWQRYIYLWINYALYK-------- 260
W YI E G +ER R +YER + ++ +WI+YAL +
Sbjct: 524 VWKAYIDFEAGEGERERARNLYERLLERTS----------HVKVWISYALMEIATLGGGE 573
Query: 261 -------EVDAGDLERTRDVY 274
E +AGD + R V+
Sbjct: 574 DEDGNEIEGEAGDADLARQVF 594
Score = 35.0 bits (79), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 28/42 (66%)
Query: 311 RKLYEKYLEWSPENCYAWSKYTELEKSLDETERARAIFELAI 352
R +E + +S ++ AW+KY + E S +E ER+R++FE A+
Sbjct: 61 RTEFESRIRYSRDSILAWTKYAQWEASQNEYERSRSVFERAL 102
>sp|P0CO11|CLF1_CRYNB Pre-mRNA-splicing factor CLF1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=CLF1 PE=3 SV=1
Length = 726
Score = 336 bits (862), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 181/405 (44%), Positives = 249/405 (61%), Gaps = 44/405 (10%)
Query: 2 IDHGRNAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEGWLSYIK 61
I+H RN +DR +TL PRVD LW Y+ +EE L NV+GARQIFERWM W P+ + W SYIK
Sbjct: 125 INHARNLFDRAITLLPRVDALWYKYVYLEELLLNVSGARQIFERWMQWEPNDKAWQSYIK 184
Query: 62 FKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLADD 121
+ RYNE+ RA I+ER + C P + W+ +A FE G+ D+AR V++ A+E F D+
Sbjct: 185 LEERYNELDRASAIYERWIACRPIPKN-WVTWAKFEEDRGQPDKAREVFQTALE-FFGDE 242
Query: 122 HDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYGDR 181
++ E+ FA F M KE +RAR IYKFAL R+P+ ++ LY ++ FEKQ+GDR
Sbjct: 243 EEQVEKAQSVFAAFARMETRLKEFERARVIYKFALARLPRSKSASLYAQYTKFEKQHGDR 302
Query: 182 EGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEE---RVGNQE-------RVREVYE 231
G+E + GK R+QYE+ + +P NYD WF RLEE R ++ RVREVYE
Sbjct: 303 AGVELTVLGKRRIQYEEELAYDPTNYDAWFSLARLEEDAYRADREDGEDVEPMRVREVYE 362
Query: 232 RAIANVPPAEEKRYWQRYIYLWINYALYKEVDAGDLERTRDVYRT--------------L 277
RA+ANVPPA EKRYW+RYIYLW+ YA ++E+D D +R RDVY+ L
Sbjct: 363 RAVANVPPALEKRYWRRYIYLWLQYAAFEEIDTKDYDRARDVYKAAVKLVPHKTFTFAKL 422
Query: 278 FIFYFSFSPRM-----------------EERRIFKKYIEMELCLGNIDPCRKLYEKYLEW 320
++ Y F R + ++F YIE+E+ L D R LYEK+L +
Sbjct: 423 WLAYAYFEIRRLDVSAARKVLGAGIGMCPKPKLFTGYIELEMRLREFDRVRTLYEKFLTY 482
Query: 321 SPENCYAWSKYTELEKSLDETERARAIFELAIAQPILDLPEFLWK 365
P AW ++T++E ++++ ER RAIFELA+ Q LD+PE +WK
Sbjct: 483 DPSLSSAWIQWTQVESAVEDFERVRAIFELAVQQS-LDMPEIVWK 526
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 125/301 (41%), Gaps = 71/301 (23%)
Query: 55 GWLSYIKFKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAV 114
W Y +++ NE +R+R +FER + P ++ WI + D E+K ++ ARN+++ A+
Sbjct: 77 AWTKYAQWEASQNEYERSRSVFERALDVDPRSVDLWIKYTDMELKARNINHARNLFDRAI 136
Query: 115 EIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAF 174
+ D L+ + EE+ N A ++ +++ +
Sbjct: 137 TLLPRVDA-----LWYKYVYLEELLLNV-------------------SGARQIFERWMQW 172
Query: 175 EKQYGDREGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAI 234
E N W YI+LEER +R +YER I
Sbjct: 173 EP-----------------------------NDKAWQSYIKLEERYNELDRASAIYERWI 203
Query: 235 ANVPPAEEKRYWQRYIYLWINYALYKEVDAGDLERTRDVYRTLFIFYFSFSPRMEE-RRI 293
A P + W+ +A ++E D G ++ R+V++T F+ ++E+ + +
Sbjct: 204 ACRPIPKN----------WVTWAKFEE-DRGQPDKAREVFQTALEFFGDEEEQVEKAQSV 252
Query: 294 FKKYIEMELCLGNIDPCRKLYEKYLEWSPENCYA--WSKYTELEKSLDETERARAIFELA 351
F + ME L + R +Y+ L P + A +++YT+ EK + RA EL
Sbjct: 253 FAAFARMETRLKEFERARVIYKFALARLPRSKSASLYAQYTKFEKQHGD----RAGVELT 308
Query: 352 I 352
+
Sbjct: 309 V 309
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 90/203 (44%), Gaps = 28/203 (13%)
Query: 2 IDHGRNAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPD-HEGWLSYI 60
+ R + + P+ +L+ YI +E L R ++E+++ + P W+ +
Sbjct: 436 VSAARKVLGAGIGMCPK-PKLFTGYIELEMRLREFDRVRTLYEKFLTYDPSLSSAWIQWT 494
Query: 61 KFKLRYNEVQRARHIFERLVQCHPYNLS--AWINFADFEMKMGEVDRARNVYECAVEIFL 118
+ + + +R R IFE VQ ++ W + DFE GE +RARN+YE +E
Sbjct: 495 QVESAVEDFERVRAIFELAVQ-QSLDMPEIVWKAYIDFEAGEGERERARNLYERLLE--- 550
Query: 119 ADDHDEAEQLFVAFAKFE-------------EMGCNCKETDRARCIYKFAL-DRIPKGRA 164
++++++A E E+ + D AR +++ D KG
Sbjct: 551 ---RTSHVKVWISYALMEIATLGGGEDEDGNEIEGEAGDADLARQVFERGYKDLRAKGEK 607
Query: 165 ED---LYRKFLAFEKQYGDREGI 184
ED L + +FE+++GD E +
Sbjct: 608 EDRAVLLESWKSFEQEHGDEETL 630
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 129/321 (40%), Gaps = 82/321 (25%)
Query: 22 LWNNYIRMEENLGN-------VAGARQI-FERWMHWMP-DHEGWLSYIKFK---LRYN-- 67
L+ Y + E+ G+ V G R+I +E + + P +++ W S + + R +
Sbjct: 288 LYAQYTKFEKQHGDRAGVELTVLGKRRIQYEEELAYDPTNYDAWFSLARLEEDAYRADRE 347
Query: 68 -----EVQRARHIFERLVQCHPYNLSA---------WINFADFE-MKMGEVDRARNVYEC 112
E R R ++ER V P L W+ +A FE + + DRAR+VY+
Sbjct: 348 DGEDVEPMRVREVYERAVANVPPALEKRYWRRYIYLWLQYAAFEEIDTKDYDRARDVYKA 407
Query: 113 AVEIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPK----------- 161
AV++ A +L++A+A FE + AR + + PK
Sbjct: 408 AVKLVPHKTFTFA-KLWLAYAYFE---IRRLDVSAARKVLGAGIGMCPKPKLFTGYIELE 463
Query: 162 ------GRAEDLYRKFLAFEKQYGDR----EGIEDAIAG--KMRLQYEDGVRKN-PMNYD 208
R LY KFL ++ +E A+ ++R +E V+++ M
Sbjct: 464 MRLREFDRVRTLYEKFLTYDPSLSSAWIQWTQVESAVEDFERVRAIFELAVQQSLDMPEI 523
Query: 209 TWFDYIRLEERVGNQERVREVYERAIANVPPAEEKRYWQRYIYLWINYALYK-------- 260
W YI E G +ER R +YER + ++ +WI+YAL +
Sbjct: 524 VWKAYIDFEAGEGERERARNLYERLLERTS----------HVKVWISYALMEIATLGGGE 573
Query: 261 -------EVDAGDLERTRDVY 274
E +AGD + R V+
Sbjct: 574 DEDGNEIEGEAGDADLARQVF 594
Score = 35.0 bits (79), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 28/42 (66%)
Query: 311 RKLYEKYLEWSPENCYAWSKYTELEKSLDETERARAIFELAI 352
R +E + +S ++ AW+KY + E S +E ER+R++FE A+
Sbjct: 61 RTEFESRIRYSRDSILAWTKYAQWEASQNEYERSRSVFERAL 102
>sp|Q9HF03|CLF1_CRYNH Pre-mRNA-splicing factor CLF1 OS=Cryptococcus neoformans var.
grubii serotype A (strain H99 / ATCC 208821 / CBS 10515
/ FGSC 9487) GN=CLF1 PE=3 SV=1
Length = 724
Score = 335 bits (860), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 181/405 (44%), Positives = 249/405 (61%), Gaps = 44/405 (10%)
Query: 2 IDHGRNAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEGWLSYIK 61
I+H RN +DR +TL PRVD LW Y+ +EE L NV+GARQIFERWM W P+ + W SYIK
Sbjct: 125 INHARNLFDRAITLLPRVDALWYKYVYLEELLLNVSGARQIFERWMQWEPNDKAWQSYIK 184
Query: 62 FKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLADD 121
+ RYNE+ RA I+ER + C P + W+ +A FE G+ D+AR V++ A+E F D+
Sbjct: 185 LEERYNELDRASAIYERWIACRPIPKN-WVAWAKFEEDRGQPDKAREVFQTALE-FFGDE 242
Query: 122 HDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYGDR 181
++ E+ FA F M KE +RAR IYKFAL R+P+ ++ LY ++ FEKQ+GDR
Sbjct: 243 EEQVEKAQSVFAAFARMETRLKEFERARVIYKFALARLPRSKSASLYAQYTKFEKQHGDR 302
Query: 182 EGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEE---RVGNQE-------RVREVYE 231
G+E + GK R+QYE+ + +P NYD WF RLEE R ++ RVREVYE
Sbjct: 303 AGVELTVLGKRRIQYEEELAYDPTNYDAWFSLARLEEDAYRADREDGEDVEPMRVREVYE 362
Query: 232 RAIANVPPAEEKRYWQRYIYLWINYALYKEVDAGDLERTRDVYRT--------------L 277
RA+ANVPPA EKRYW+RYIYLW+ YA ++E+D D +R RDVY+ L
Sbjct: 363 RAVANVPPALEKRYWRRYIYLWLQYAAFEEIDTKDYDRARDVYKAAVKLVPHKTFTFAKL 422
Query: 278 FIFYFSFSPRM-----------------EERRIFKKYIEMELCLGNIDPCRKLYEKYLEW 320
++ Y F R + ++F YIE+E+ L D R LYEK+L +
Sbjct: 423 WLAYAYFEIRRLDVSAARKVLGAGIGMCPKPKLFTGYIELEMRLREFDRVRTLYEKFLTY 482
Query: 321 SPENCYAWSKYTELEKSLDETERARAIFELAIAQPILDLPEFLWK 365
P AW ++T++E ++++ ER RAIFELA+ Q LD+PE +WK
Sbjct: 483 DPSLSSAWIQWTQVESAVEDFERVRAIFELAVQQS-LDMPEIVWK 526
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 125/301 (41%), Gaps = 71/301 (23%)
Query: 55 GWLSYIKFKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAV 114
W Y +++ NE +R+R +FER + P ++ WI + D E+K ++ ARN+++ A+
Sbjct: 77 AWTKYAQWEASQNEYERSRSVFERALDVDPRSVDLWIKYTDMELKARNINHARNLFDRAI 136
Query: 115 EIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAF 174
+ D L+ + EE+ N A ++ +++ +
Sbjct: 137 TLLPRVDA-----LWYKYVYLEELLLNV-------------------SGARQIFERWMQW 172
Query: 175 EKQYGDREGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAI 234
E N W YI+LEER +R +YER I
Sbjct: 173 EP-----------------------------NDKAWQSYIKLEERYNELDRASAIYERWI 203
Query: 235 ANVPPAEEKRYWQRYIYLWINYALYKEVDAGDLERTRDVYRTLFIFYFSFSPRMEE-RRI 293
A P + W+ +A ++E D G ++ R+V++T F+ ++E+ + +
Sbjct: 204 ACRPIPKN----------WVAWAKFEE-DRGQPDKAREVFQTALEFFGDEEEQVEKAQSV 252
Query: 294 FKKYIEMELCLGNIDPCRKLYEKYLEWSPENCYA--WSKYTELEKSLDETERARAIFELA 351
F + ME L + R +Y+ L P + A +++YT+ EK + RA EL
Sbjct: 253 FAAFARMETRLKEFERARVIYKFALARLPRSKSASLYAQYTKFEKQHGD----RAGVELT 308
Query: 352 I 352
+
Sbjct: 309 V 309
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 89/201 (44%), Gaps = 28/201 (13%)
Query: 2 IDHGRNAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPD-HEGWLSYI 60
+ R + + P+ +L+ YI +E L R ++E+++ + P W+ +
Sbjct: 436 VSAARKVLGAGIGMCPKP-KLFTGYIELEMRLREFDRVRTLYEKFLTYDPSLSSAWIQWT 494
Query: 61 KFKLRYNEVQRARHIFERLVQCHPYNLS--AWINFADFEMKMGEVDRARNVYECAVEIFL 118
+ + + +R R IFE VQ ++ W + DFE GE +RARN+YE +E
Sbjct: 495 QVESAVEDFERVRAIFELAVQ-QSLDMPEIVWKAYIDFEAGEGERERARNLYERLLE--- 550
Query: 119 ADDHDEAEQLFVAFAKFE-------------EMGCNCKETDRARCIYKFAL-DRIPKGRA 164
++++++A E E+ + D AR +++ D KG
Sbjct: 551 ---RTSHVKVWISYALMEIATLGGGEDEDGNEIEGEAGDADLARKVFERGYKDLRAKGEK 607
Query: 165 ED---LYRKFLAFEKQYGDRE 182
ED L + +FE+++GD E
Sbjct: 608 EDRAVLLESWKSFEQEHGDEE 628
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 129/321 (40%), Gaps = 82/321 (25%)
Query: 22 LWNNYIRMEENLGN-------VAGARQI-FERWMHWMP-DHEGWLSYIKFK---LRYN-- 67
L+ Y + E+ G+ V G R+I +E + + P +++ W S + + R +
Sbjct: 288 LYAQYTKFEKQHGDRAGVELTVLGKRRIQYEEELAYDPTNYDAWFSLARLEEDAYRADRE 347
Query: 68 -----EVQRARHIFERLVQCHPYNLSA---------WINFADFE-MKMGEVDRARNVYEC 112
E R R ++ER V P L W+ +A FE + + DRAR+VY+
Sbjct: 348 DGEDVEPMRVREVYERAVANVPPALEKRYWRRYIYLWLQYAAFEEIDTKDYDRARDVYKA 407
Query: 113 AVEIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPK----------- 161
AV++ A +L++A+A FE + AR + + PK
Sbjct: 408 AVKLVPHKTFTFA-KLWLAYAYFE---IRRLDVSAARKVLGAGIGMCPKPKLFTGYIELE 463
Query: 162 ------GRAEDLYRKFLAFEKQYGDR----EGIEDAIAG--KMRLQYEDGVRKN-PMNYD 208
R LY KFL ++ +E A+ ++R +E V+++ M
Sbjct: 464 MRLREFDRVRTLYEKFLTYDPSLSSAWIQWTQVESAVEDFERVRAIFELAVQQSLDMPEI 523
Query: 209 TWFDYIRLEERVGNQERVREVYERAIANVPPAEEKRYWQRYIYLWINYALYK-------- 260
W YI E G +ER R +YER + ++ +WI+YAL +
Sbjct: 524 VWKAYIDFEAGEGERERARNLYERLLERTS----------HVKVWISYALMEIATLGGGE 573
Query: 261 -------EVDAGDLERTRDVY 274
E +AGD + R V+
Sbjct: 574 DEDGNEIEGEAGDADLARKVF 594
Score = 35.0 bits (79), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 28/42 (66%)
Query: 311 RKLYEKYLEWSPENCYAWSKYTELEKSLDETERARAIFELAI 352
R +E + +S ++ AW+KY + E S +E ER+R++FE A+
Sbjct: 61 RTEFESRIRYSRDSILAWTKYAQWEASQNEYERSRSVFERAL 102
>sp|Q4PB37|CLF1_USTMA Pre-mRNA-splicing factor CLF1 OS=Ustilago maydis (strain 521 / FGSC
9021) GN=CLF1 PE=3 SV=1
Length = 781
Score = 333 bits (853), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 176/422 (41%), Positives = 251/422 (59%), Gaps = 60/422 (14%)
Query: 2 IDHGRNAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEGWLSYIK 61
+ H RN +DR V++ PR+DQLW Y+ +EE LGN+ G RQ+FERWM W P+ + W +YI
Sbjct: 120 VQHARNLYDRAVSILPRIDQLWYKYVHLEELLGNIPGTRQVFERWMKWEPEEKAWHAYIN 179
Query: 62 FKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLADD 121
++RY+E+ RA I+ER V CHP WI +A FE G +++AR V++ A++ ++ +D
Sbjct: 180 LEVRYDELDRASAIWERCVTCHPVP-KQWIRWAKFEEDRGNLEKARIVFQMALD-YIGED 237
Query: 122 HDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYGDR 181
D E+ F F +M KE +RAR IYK+AL+R+P+ ++E +Y + FEKQ+G
Sbjct: 238 EDAMEKAQSVFTAFAKMETRLKEYERARVIYKYALERLPRSKSEGIYSSYTRFEKQFGTM 297
Query: 182 EGIEDAIAGKMRLQYEDGVRKN-----PMNYDTWFDYIRLEERV--------GNQE---- 224
+ED + GK R+QYE+ + P +YDTWFDY RLEE G+Q+
Sbjct: 298 NSVEDTVIGKRRIQYEEELAAQEAGGAPADYDTWFDYSRLEEDAYRALLATGGSQDQLQQ 357
Query: 225 ---RVREVYERAIANVPPAEEKRYWQRYIYLWINYALYKEVDAGDLERTRDVYRTLFIFY 281
RVREVYERAIA VP ++EKR W+RYI+LW+ YAL++E+D D +RTR++Y+
Sbjct: 358 AVKRVREVYERAIAQVPSSQEKRDWRRYIFLWLRYALFEEIDTRDYDRTREIYKAAIALV 417
Query: 282 ----FSFS------PRMEERR---------------------IFKKYIEMELCLGNIDPC 310
F+F+ R E RR +F YIE+E+ L D
Sbjct: 418 PHRRFTFAKLWVQYARFEVRRLELTAARKILGAAIGMAPKLKLFSSYIELEVSLKEFDRA 477
Query: 311 RKLYEKYLEWSPENCYAWSKYTELEKSLDETERARAIFELAIAQP-------ILDLPEFL 363
RK+YEK LEW P N W ++ ELEK+L +T+RARA+FEL + Q LD+PE +
Sbjct: 478 RKIYEKALEWDPTNSQTWVRFAELEKNLFDTDRARALFELGVGQAEGGEASGGLDMPEIV 537
Query: 364 WK 365
WK
Sbjct: 538 WK 539
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 92/165 (55%), Gaps = 19/165 (11%)
Query: 190 GKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIANVPPAEEKRYWQRY 249
G+ R ++ED +R+N +N TW Y E G +R R +YERA+ +V P +
Sbjct: 53 GRRRSEFEDRLRRNGLNMSTWIKYASWEASQGEMDRCRSIYERAL-DVEP--------HH 103
Query: 250 IYLWINYALYKEVDAGDLERTRDVY-RTLFIFYFSFSPRMEERRIFKKYIEMELCLGNID 308
+ LW+ Y +E+ +++ R++Y R + I PR+++ ++ KY+ +E LGNI
Sbjct: 104 LPLWLRYT-EQELKMRNVQHARNLYDRAVSIL-----PRIDQ--LWYKYVHLEELLGNIP 155
Query: 309 PCRKLYEKYLEWSPENCYAWSKYTELEKSLDETERARAIFELAIA 353
R+++E++++W PE AW Y LE DE +RA AI+E +
Sbjct: 156 GTRQVFERWMKWEPEEK-AWHAYINLEVRYDELDRASAIWERCVT 199
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 123/271 (45%), Gaps = 33/271 (12%)
Query: 71 RARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLADDHDEAEQLFV 130
R R FE ++ + N+S WI +A +E GE+DR R++YE A+++ E L +
Sbjct: 54 RRRSEFEDRLRRNGLNMSTWIKYASWEASQGEMDRCRSIYERALDV-------EPHHLPL 106
Query: 131 AFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYGDREGIEDAIAG 190
+ ++ E + AR +Y A+ +P R + L+ K++ E+ G+ G
Sbjct: 107 -WLRYTEQELKMRNVQHARNLYDRAVSILP--RIDQLWYKYVHLEELLGNIPGTRQVFER 163
Query: 191 KMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIANVPPAEEKRYWQRYI 250
M+ + E+ W YI LE R +R ++ER + P ++
Sbjct: 164 WMKWEPEE---------KAWHAYINLEVRYDELDRASAIWERCVTCHPVPKQ-------- 206
Query: 251 YLWINYALYKEVDAGDLERTRDVYRTLFIFYFSFSPRMEE-RRIFKKYIEMELCLGNIDP 309
WI +A ++E D G+LE+ R V++ + ME+ + +F + +ME L +
Sbjct: 207 --WIRWAKFEE-DRGNLEKARIVFQMALDYIGEDEDAMEKAQSVFTAFAKMETRLKEYER 263
Query: 310 CRKLYEKYLEWSPENCYA--WSKYTELEKSL 338
R +Y+ LE P + +S YT EK
Sbjct: 264 ARVIYKYALERLPRSKSEGIYSSYTRFEKQF 294
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 113/277 (40%), Gaps = 68/277 (24%)
Query: 23 WNNYIRMEEN----LGNVAGA-----------RQIFERWMHWMPDHE---GWLSYIKFKL 64
W +Y R+EE+ L G+ R+++ER + +P + W YI L
Sbjct: 331 WFDYSRLEEDAYRALLATGGSQDQLQQAVKRVREVYERAIAQVPSSQEKRDWRRYIFLWL 390
Query: 65 RY--------NEVQRARHIFERLVQCHPYN----LSAWINFADFEMKMGEVDRARNVYEC 112
RY + R R I++ + P+ W+ +A FE++ E+ AR +
Sbjct: 391 RYALFEEIDTRDYDRTREIYKAAIALVPHRRFTFAKLWVQYARFEVRRLELTAARKILGA 450
Query: 113 AVEIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFL 172
A+ + A +L + F+ + E+ + KE DRAR IY+ AL+ P + +F
Sbjct: 451 AIGM--------APKLKL-FSSYIELEVSLKEFDRARKIYEKALEWDPTN--SQTWVRFA 499
Query: 173 AFEKQYGDREGIEDAIAGKMRLQYEDGVRKNP---------MNYDTWFDYIRLEERVGNQ 223
EK D + + R +E GV + M W YI E
Sbjct: 500 ELEKNLFDTD--------RARALFELGVGQAEGGEASGGLDMPEIVWKAYIDFEFEEREW 551
Query: 224 ERVREVYERAIANVPPAEEKRYWQRYIYLWINYALYK 260
E+V +YER +A ++ +WI+YAL K
Sbjct: 552 EKVDALYERLLAKSG----------HVKVWISYALSK 578
Score = 37.7 bits (86), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 3 DHGRNAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEG------- 55
D R +++ + P Q W + +E+NL + AR +FE + E
Sbjct: 475 DRARKIYEKALEWDPTNSQTWVRFAELEKNLFDTDRARALFELGVGQAEGGEASGGLDMP 534
Query: 56 ---WLSYIKFKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNV 109
W +YI F+ E ++ ++ERL+ ++ WI++A + +++RA +
Sbjct: 535 EIVWKAYIDFEFEEREWEKVDALYERLL-AKSGHVKVWISYA-----LSKINRATAI 585
>sp|Q7SGD2|CLF1_NEUCR Pre-mRNA-splicing factor clf-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=clf-1 PE=3 SV=1
Length = 695
Score = 329 bits (844), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 171/397 (43%), Positives = 241/397 (60%), Gaps = 37/397 (9%)
Query: 2 IDHGRNAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEGWLSYIK 61
I+H RN DR VT PRV LW Y+ + E LG++ G RQ+F+RWM W PD + W +YI+
Sbjct: 122 INHARNLLDRAVTRLPRVTSLWYQYLYVMEMLGDIPGTRQVFDRWMKWQPDEQAWSAYIR 181
Query: 62 FKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLADD 121
+ RY E RAR IF HP W+ +A FE + G D R V++ A++
Sbjct: 182 LEKRYGEFDRAREIFRAFTAVHP-EPRTWLKWAKFEEEYGTSDTVREVFQTAIQTIAETL 240
Query: 122 HDEA--EQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYG 179
D+A E++F+AFA++E +E +RAR IYKF LD +P+ ++ L+ + FEKQ+G
Sbjct: 241 GDDAVDERIFIAFARYE---ARLREYERARAIYKFGLDNLPRSKSMTLHAHYTTFEKQFG 297
Query: 180 DREGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIANVPP 239
D+EG+ED I K R YE+ V++N NYD WFD+ RLEE G+ +R REVYERAIA VPP
Sbjct: 298 DKEGVEDVILTKRRRLYEEQVKENAKNYDVWFDFARLEESGGDVDRTREVYERAIAQVPP 357
Query: 240 AEEKRYWQRYIYLWINYALYKEVDAGDLERTRDVYRTLFIFY----FSFS------PRME 289
+EKR+W+RYI+L++ YA+++E + D+ R R +Y T F+F+ E
Sbjct: 358 TQEKRHWRRYIFLFLFYAIWEERETKDIGRARQIYDTCLNLIPHKKFTFAKVWVAKAHFE 417
Query: 290 ER---------------------RIFKKYIEMELCLGNIDPCRKLYEKYLEWSPENCYAW 328
R +IFK+YI +E L + CR LYEK++ ++P NC W
Sbjct: 418 IRQGQLTTARKTLGRAIGMCPKDKIFKEYILLEQKLYEFERCRTLYEKHVMYNPANCQTW 477
Query: 329 SKYTELEKSLDETERARAIFELAIAQPILDLPEFLWK 365
K+ ELE+ LD+ ER RAIFELA++QPILD+PE +WK
Sbjct: 478 IKWAELERGLDDLERTRAIFELAVSQPILDMPEVVWK 514
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 129/308 (41%), Gaps = 35/308 (11%)
Query: 55 GWLSYIKFKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAV 114
WL Y +++L E RAR +FER + HP N WI + E+K ++ ARN+ + AV
Sbjct: 74 NWLQYAQWELEQKEFARARSVFERALDVHPNNTQLWIRYVQAEIKNRNINHARNLLDRAV 133
Query: 115 EIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAF 174
L+ + EM + T R ++ + P E + ++
Sbjct: 134 TRL-----PRVTSLWYQYLYVMEMLGDIPGT---RQVFDRWMKWQPD---EQAWSAYIRL 182
Query: 175 EKQYGDREGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAI 234
EK+YG+ + + V P TW + + EE G + VREV++ AI
Sbjct: 183 EKRYGEFDRAREIFRAFT------AVHPEPR---TWLKWAKFEEEYGTSDTVREVFQTAI 233
Query: 235 ANVPPAEEKRYWQRYIYLWINYALYKEVDAGDLERTRDVYRTLFIFYFSFSPRMEERRIF 294
+ I+ I +A Y E + ER R +Y+ F PR + +
Sbjct: 234 QTIAETLGDDAVDERIF--IAFARY-EARLREYERARAIYK----FGLDNLPRSKSMTLH 286
Query: 295 KKYIEMELCLGN--------IDPCRKLYEKYLEWSPENCYAWSKYTELEKSLDETERARA 346
Y E G+ + R+LYE+ ++ + +N W + LE+S + +R R
Sbjct: 287 AHYTTFEKQFGDKEGVEDVILTKRRRLYEEQVKENAKNYDVWFDFARLEESGGDVDRTRE 346
Query: 347 IFELAIAQ 354
++E AIAQ
Sbjct: 347 VYERAIAQ 354
Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 190 GKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIANVPPAEEKRYWQRY 249
G+ R ++ED VR+N + W Y + E R R V+ERA+ +V P +
Sbjct: 55 GRKRKEFEDYVRRNRVRLSNWLQYAQWELEQKEFARARSVFERAL-DVHPNNTQ------ 107
Query: 250 IYLWINYALYKEVDAGDLERTRDVYRTLFIFYFSFSPRMEERRIFKKYIEMELCLGNIDP 309
LWI Y V A R + R L + PR+ ++ +Y+ + LG+I
Sbjct: 108 --LWIRY-----VQAEIKNRNINHARNLLDRAVTRLPRVTS--LWYQYLYVMEMLGDIPG 158
Query: 310 CRKLYEKYLEWSPENCYAWSKYTELEKSLDETERARAIF 348
R++++++++W P+ AWS Y LEK E +RAR IF
Sbjct: 159 TRQVFDRWMKWQPDE-QAWSAYIRLEKRYGEFDRAREIF 196
>sp|P87312|CLF1_SCHPO Pre-mRNA-splicing factor cwf4 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cwf4 PE=1 SV=1
Length = 674
Score = 320 bits (819), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 164/395 (41%), Positives = 240/395 (60%), Gaps = 37/395 (9%)
Query: 2 IDHGRNAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEGWLSYIK 61
I+H RN +DR VT PRVD+LW Y+ MEE LGN+ G RQ+FERW+ W PD W+SYI+
Sbjct: 120 INHARNLFDRAVTQLPRVDKLWYKYVYMEEMLGNITGCRQVFERWLKWEPDENCWMSYIR 179
Query: 62 FKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLADD 121
+ RY+E +RAR I+ER V HP ++ W+ +A FE + G R VY A++ +
Sbjct: 180 MERRYHENERARGIYERFVVVHP-EVTNWLRWARFEEECGNAANVRQVYLAAIDALGQEF 238
Query: 122 HDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYGDR 181
+E + F+AFAKFE KE +RAR I+K+A+D +P+ ++ +LY+++ FEKQ+GD
Sbjct: 239 LNE--RFFIAFAKFE---IRQKEYERARTIFKYAIDFMPRSKSMELYKEYTHFEKQFGDH 293
Query: 182 EGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIANVPPAE 241
G+E + K RLQYE ++ +P +YDTW D ++LEE G+ +RE YE+AIA VP
Sbjct: 294 LGVESTVLDKRRLQYEKLLKDSPYDYDTWLDLLKLEESAGDINTIRETYEKAIAKVPEVV 353
Query: 242 EKRYWQRYIYLWINYALYKEVDAGDLERTRDVYR--------------TLFIFYFSFSPR 287
EK W+RY+Y+W+NY L++E+D D++R R VY+ L++ Y F R
Sbjct: 354 EKNAWRRYVYIWLNYCLFEEIDVKDVDRARKVYQEALKLIPHKKFTFAKLWLMYAMFELR 413
Query: 288 ME-----------------ERRIFKKYIEMELCLGNIDPCRKLYEKYLEWSPENCYAWSK 330
+ ++F+ YIE E + D CR LYEK++ + PE C W
Sbjct: 414 QRKIDVARKTLGRALGMCPKPKLFRGYIEFEDAIKQFDRCRILYEKWILYDPEACAPWLG 473
Query: 331 YTELEKSLDETERARAIFELAIAQPILDLPEFLWK 365
Y LE L +++RARA++ LA+ QPIL+ PE +WK
Sbjct: 474 YAALETKLGDSDRARALYNLAVNQPILETPELVWK 508
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 139/307 (45%), Gaps = 39/307 (12%)
Query: 56 WLSYIKFKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVE 115
W+ Y +++L E RAR +FER + + W+ + + EMK ++ ARN+++ AV
Sbjct: 73 WMRYGQWELDQKEFARARSVFERALDVDSTYIPLWLKYIECEMKNRNINHARNLFDRAVT 132
Query: 116 IFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFE 175
++L+ + EEM N R +++ L P E+ + ++ E
Sbjct: 133 QL-----PRVDKLWYKYVYMEEMLGNITG---CRQVFERWLKWEPD---ENCWMSYIRME 181
Query: 176 KQYGDREGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIA 235
++Y + E + R YE V +P W + R EE GN VR+VY +A
Sbjct: 182 RRYHENE--------RARGIYERFVVVHP-EVTNWLRWARFEEECGNAANVRQVY---LA 229
Query: 236 NVPPAEEKRYWQRYIYLWINYALYKEVDAGDLERTRDVYRTLFIFYFSFSPRMEERRIFK 295
+ ++ +R+ +I +A + E+ + ER RT+F + F PR + ++K
Sbjct: 230 AIDALGQEFLNERF---FIAFAKF-EIRQKEYERA----RTIFKYAIDFMPRSKSMELYK 281
Query: 296 KYIEMELCLGN--------IDPCRKLYEKYLEWSPENCYAWSKYTELEKSLDETERARAI 347
+Y E G+ +D R YEK L+ SP + W +LE+S + R
Sbjct: 282 EYTHFEKQFGDHLGVESTVLDKRRLQYEKLLKDSPYDYDTWLDLLKLEESAGDINTIRET 341
Query: 348 FELAIAQ 354
+E AIA+
Sbjct: 342 YEKAIAK 348
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 20/168 (11%)
Query: 190 GKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIANVPPAEEKRYWQRY 249
G+ R ++ED +R+N + W Y + E R R V+ERA+ +V Y
Sbjct: 53 GRKRKEFEDAIRRNRLAMGHWMRYGQWELDQKEFARARSVFERAL-DVDST--------Y 103
Query: 250 IYLWINYALYKEVDAGDLERTRDVYRTLFIFYFSFSPRMEERRIFKKYIEMELCLGNIDP 309
I LW+ Y ++ R + R LF + PR++ +++ KY+ ME LGNI
Sbjct: 104 IPLWLKY-----IECEMKNRNINHARNLFDRAVTQLPRVD--KLWYKYVYMEEMLGNITG 156
Query: 310 CRKLYEKYLEWSP-ENCYAWSKYTELEKSLDETERARAIFE-LAIAQP 355
CR+++E++L+W P ENC W Y +E+ E ERAR I+E + P
Sbjct: 157 CRQVFERWLKWEPDENC--WMSYIRMERRYHENERARGIYERFVVVHP 202
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 71/157 (45%), Gaps = 23/157 (14%)
Query: 3 DHGRNAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEG----WLS 58
D R +++ + P W Y +E LG+ AR ++ ++ P E W +
Sbjct: 451 DRCRILYEKWILYDPEACAPWLGYAALETKLGDSDRARALYNLAVN-QPILETPELVWKA 509
Query: 59 YIKFKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVD-------------- 104
YI F+ E +AR I+++L++ P+ + WI+FA+FE+ E D
Sbjct: 510 YIDFEFEEMEYGKARSIYQQLLRTAPH-VKVWISFANFEIAHLEDDDEEPPNEEVASPTA 568
Query: 105 --RARNVYECAVEIFLADD-HDEAEQLFVAFAKFEEM 138
RARNV+E A+ +E L A+ +FE M
Sbjct: 569 VVRARNVFENALAHLRQQGLKEERVVLLEAWKQFEAM 605
>sp|Q6C186|CLF1_YARLI Pre-mRNA-splicing factor CLF1 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=CLF1 PE=3 SV=1
Length = 676
Score = 310 bits (795), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 165/401 (41%), Positives = 237/401 (59%), Gaps = 42/401 (10%)
Query: 2 IDHGRNAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEGWLSYIK 61
I+H RN DR VTL PRVD+LW Y+ EE LGN+AG R +FERWMHW P W +Y+
Sbjct: 116 INHARNLLDRAVTLLPRVDKLWFTYVATEETLGNIAGCRAVFERWMHWRPPVTAWAAYVN 175
Query: 62 FKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLADD 121
+ RY E RAR I R V HP AW +A FEM+ G D R VY ++ +
Sbjct: 176 MEKRYREFDRARGILRRYVTVHP-GAPAWNKWAKFEMEAGNRDTVREVYALGIDTLVEMA 234
Query: 122 HDEA----EQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQ 177
H E L +A FE +E +RAR +Y + L+++PK ++ LY + AFEKQ
Sbjct: 235 HGGVDFLDESLLAGWASFE---TRHREYERARALYTYGLEKLPKSKSAKLYADYTAFEKQ 291
Query: 178 YGDREGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVG-NQERVREVYERAIAN 236
YG +EGIE+ + K R +YED ++++P +YDTWF YI L + G +++RE++ERA++N
Sbjct: 292 YGAKEGIENVVLTKRRSKYEDQLKEDPADYDTWFSYITLGQESGLEADQIREIFERAVSN 351
Query: 237 VPPAEEKRYWQRYIYLWINYALYKEVDAGDLERTRDVYRT--------------LFIFYF 282
VPP KR W+RYI+LWI YA+++E++ ++E+ R++Y+T +++ +
Sbjct: 352 VPP-HSKRLWRRYIFLWIKYAIWEELENKEVEKAREIYKTCISIIPHKKFTFAKVWLLWA 410
Query: 283 SFSPRM----EERRI--------------FKKYIEMELCLGNIDPCRKLYEKYLEWSPEN 324
F R E R+I +K YI +E L D CRKLY+KY+E E
Sbjct: 411 KFEIRHGNLPEARKILGRGLGMSGGKPALYKGYIALEAKLREFDRCRKLYDKYVEKFAEF 470
Query: 325 CYAWSKYTELEKSLDETERARAIFELAIAQPILDLPEFLWK 365
W +Y ELE+ L + ERARAIFELA++QP +++PE +WK
Sbjct: 471 AAPWMEYAELEQMLGDEERARAIFELAVSQPEMEMPELVWK 511
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 25/163 (15%)
Query: 190 GKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAI----ANVPPAEEKRY 245
G+ R +YE +R+N +N W Y + E R R V+ERA+ +VP
Sbjct: 49 GRKRQEYEGALRRNRLNTGQWMRYAQWELEQREFARARSVFERALEVNSTHVPT------ 102
Query: 246 WQRYIYLWINYALYKEVDAGDLERTRDVYRTLFIFYFSFSPRMEERRIFKKYIEMELCLG 305
W RYI + E+ + R L + PR++ +++ Y+ E LG
Sbjct: 103 WIRYIQCELK------------EKNINHARNLLDRAVTLLPRVD--KLWFTYVATEETLG 148
Query: 306 NIDPCRKLYEKYLEWSPENCYAWSKYTELEKSLDETERARAIF 348
NI CR ++E+++ W P AW+ Y +EK E +RAR I
Sbjct: 149 NIAGCRAVFERWMHWRP-PVTAWAAYVNMEKRYREFDRARGIL 190
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 105/237 (44%), Gaps = 32/237 (13%)
Query: 52 DHEGWLSYIKFKLRYN-EVQRARHIFERLVQCHPYN--------LSAWINFADFE-MKMG 101
D++ W SYI E + R IFER V P + + WI +A +E ++
Sbjct: 320 DYDTWFSYITLGQESGLEADQIREIFERAVSNVPPHSKRLWRRYIFLWIKYAIWEELENK 379
Query: 102 EVDRARNVYECAVEIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPK 161
EV++AR +Y+ + I A ++++ +AKFE N E AR I L
Sbjct: 380 EVEKAREIYKTCISIIPHKKFTFA-KVWLLWAKFEIRHGNLPE---ARKILGRGLGM--S 433
Query: 162 GRAEDLYRKFLAFEKQYGDREGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVG 221
G LY+ ++A E + + + + R Y+ V K W +Y LE+ +G
Sbjct: 434 GGKPALYKGYIALEAKLREFD--------RCRKLYDKYVEKFAEFAAPWMEYAELEQMLG 485
Query: 222 NQERVREVYERAIANVPPAEEKRYWQRYIYLWINYALYKEVDAGDLERTRDVYRTLF 278
++ER R ++E A++ + W+R+I E + + +R R +YR L
Sbjct: 486 DEERARAIFELAVSQPEMEMPELVWKRFIEF--------EAEEENYDRARAIYRQLL 534
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 90/225 (40%), Gaps = 41/225 (18%)
Query: 3 DHGRNAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEG----WLS 58
D R +D+ V W Y +E+ LG+ AR IFE + P+ E W
Sbjct: 454 DRCRKLYDKYVEKFAEFAAPWMEYAELEQMLGDEERARAIFELAVS-QPEMEMPELVWKR 512
Query: 59 YIKFKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFL 118
+I+F+ RAR I+ +L+ ++ WI+FA FE+ + D+
Sbjct: 513 FIEFEAEEENYDRARAIYRQLLDRTHGHIKVWISFAQFEVTVPAEDQE----------LQ 562
Query: 119 ADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAED----LYRKFLAF 174
+D EAE AK RAR I+ A D + + L+ + F
Sbjct: 563 YNDEGEAEIEVTEEAK-----------ARARSIFGEAWDALKAANKREERVVLFESWREF 611
Query: 175 EKQYGDREGIED-----AIAGKMRLQYEDGVRKNPMNYDTWFDYI 214
E+++GD + D K + + EDG ++ + DY+
Sbjct: 612 EEEHGDDKSKADLDKRKPTPVKKKRKLEDGT------FEEYIDYV 650
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/331 (20%), Positives = 127/331 (38%), Gaps = 78/331 (23%)
Query: 71 RARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLADDHDEAEQLFV 130
R R +E ++ + N W+ +A +E++ E RAR+V+E A+E+ H
Sbjct: 50 RKRQEYEGALRRNRLNTGQWMRYAQWELEQREFARARSVFERALEV--NSTH------VP 101
Query: 131 AFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYGDREGIEDAIAG 190
+ ++ + K + AR + A+ +P R + L+ ++A E+ G+ IAG
Sbjct: 102 TWIRYIQCELKEKNINHARNLLDRAVTLLP--RVDKLWFTYVATEETLGN-------IAG 152
Query: 191 KMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIANVPPAEEKRYWQRYI 250
R +E + P W Y+ +E+R +R R + R + P A W ++
Sbjct: 153 -CRAVFERWMHWRP-PVTAWAAYVNMEKRYREFDRARGILRRYVTVHPGAPAWNKWAKF- 209
Query: 251 YLWINYALYKEVDAGDLERTRDVY------------------------------------ 274
E++AG+ + R+VY
Sbjct: 210 ----------EMEAGNRDTVREVYALGIDTLVEMAHGGVDFLDESLLAGWASFETRHREY 259
Query: 275 ---RTLFIFYFSFSPRMEERRIFKKYIEMELCLGN--------IDPCRKLYEKYLEWSPE 323
R L+ + P+ + +++ Y E G + R YE L+ P
Sbjct: 260 ERARALYTYGLEKLPKSKSAKLYADYTAFEKQYGAKEGIENVVLTKRRSKYEDQLKEDPA 319
Query: 324 NCYAWSKYTEL-EKSLDETERARAIFELAIA 353
+ W Y L ++S E ++ R IFE A++
Sbjct: 320 DYDTWFSYITLGQESGLEADQIREIFERAVS 350
>sp|Q6BSP7|CLF1_DEBHA Pre-mRNA-splicing factor CLF1 OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=CLF1 PE=3 SV=2
Length = 714
Score = 215 bits (547), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 143/409 (34%), Positives = 212/409 (51%), Gaps = 60/409 (14%)
Query: 2 IDHGRNAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEGWLSYIK 61
I H RN DR VT PRVD+LW Y++ EE L N R IFERW+ W P+ W +YI
Sbjct: 119 ITHARNLLDRAVTTLPRVDKLWFLYVQTEETLKNYQMVRIIFERWLSWNPNPSAWDAYIN 178
Query: 62 FKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVD-----RARNVYECAVEI 116
++ RY+E AR I+ R VQ H W+ + DFEM +D R RNV+E +V+
Sbjct: 179 YEKRYDEYDNAREIYIRYVQIHSSG-EIWLKWIDFEMNDVPIDPEQVKRIRNVFELSVDS 237
Query: 117 FLADDHDEAE-QLFVAFAKFEEMGCNCKETDRARCIYKFAL--DRI-----PKGRAEDLY 168
LA + + L K+ + KE +RAR I++ L D I P+ R + +Y
Sbjct: 238 MLASEALRGDISLAEIINKWSLWEISVKEYERARAIFQLMLKSDTIQEIITPEQRNQ-IY 296
Query: 169 RKFLAFEKQYGDREGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVRE 228
+ FEK YGD++ IE +I K +L+YE+ V K+P +YD+W+ YI + ++ N E RE
Sbjct: 297 SSYTEFEKSYGDKDTIESSIMIKRKLKYEEEVNKSPSDYDSWWSYISILQQEDNNEVTRE 356
Query: 229 VYERAIANVPP-AEEKRYWQRYIYLWINYALYKEVDAGDLERTRDV-------------- 273
+ERAI +P A + W+RYIY+W+ YA ++E G +E R++
Sbjct: 357 TFERAIKVIPTDAFKSTVWRRYIYIWVKYAFWEEFTMGSIENGRNIWNKALKVIPHKRFT 416
Query: 274 YRTLFIFYFSFSPRME------------------------ERRIFKKYIEMELCLGNIDP 309
+ ++I + F R + +R++FK YIE+E LG D
Sbjct: 417 FAKIWISFAQFEIRNDPENGLASARKILGRSIGQSSTVKPKRKLFKFYIELEQKLGEWDR 476
Query: 310 CRKLYEKYLEWS--PEN----CYAWSKYTELEKSLDETERARAIFELAI 352
RKLYEK+LE S EN + Y + EK++ E +R ++FEL +
Sbjct: 477 VRKLYEKWLELSLVGENNLSTINSLLTYIDFEKNIQEHQRCISLFELGV 525
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 138/311 (44%), Gaps = 33/311 (10%)
Query: 56 WLSYIKFKLRYN-EVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAV 114
WL Y K+++++N + RAR IFER ++ + ++ W ++ FE+ + ARN+ + AV
Sbjct: 71 WLRYAKWEVKHNHDFPRARSIFERALEVNVQHIPFWTHYIQFELSHKNITHARNLLDRAV 130
Query: 115 EIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAF 174
++L+ + + EE K R I++ L P A D Y + +
Sbjct: 131 TTL-----PRVDKLWFLYVQTEE---TLKNYQMVRIIFERWLSWNPNPSAWDAY---INY 179
Query: 175 EKQYGDREGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQE--RVREVYER 232
EK+Y + + + +++ + + W D+ + + ++ R+R V+E
Sbjct: 180 EKRYDEYDNAREIYIRYVQIHSSGEI------WLKWIDFEMNDVPIDPEQVKRIRNVFEL 233
Query: 233 AIANVPPAEEKRYWQRYIYLWINYALYKEVDAGDLERTRDVYRTLF---IFYFSFSPRME 289
++ ++ +E R + ++L+ E+ + ER R +++ + +P +
Sbjct: 234 SVDSMLASEALRGDISLAEIINKWSLW-EISVKEYERARAIFQLMLKSDTIQEIITPE-Q 291
Query: 290 ERRIFKKYIEMELCLGNIDPC-------RKL-YEKYLEWSPENCYAWSKYTELEKSLDET 341
+I+ Y E E G+ D RKL YE+ + SP + +W Y + + D
Sbjct: 292 RNQIYSSYTEFEKSYGDKDTIESSIMIKRKLKYEEEVNKSPSDYDSWWSYISILQQEDNN 351
Query: 342 ERARAIFELAI 352
E R FE AI
Sbjct: 352 EVTRETFERAI 362
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 77/158 (48%), Gaps = 20/158 (12%)
Query: 193 RLQYEDGVRKNPMNYDTWFDYIRLEERVGNQ-ERVREVYERAI-ANVPPAEEKRYWQRYI 250
R +YE + KN +N+ W Y + E + + R R ++ERA+ NV ++I
Sbjct: 54 RKEYEQQLNKNRLNFGQWLRYAKWEVKHNHDFPRARSIFERALEVNV----------QHI 103
Query: 251 YLWINYALYKEVDAGDLERTRDVYRTLFIFYFSFSPRMEERRIFKKYIEMELCLGNIDPC 310
W +Y + E+ ++ R+ L + PR++ +++ Y++ E L N
Sbjct: 104 PFWTHYIQF-ELSHKNITHARN----LLDRAVTTLPRVD--KLWFLYVQTEETLKNYQMV 156
Query: 311 RKLYEKYLEWSPENCYAWSKYTELEKSLDETERARAIF 348
R ++E++L W+P N AW Y EK DE + AR I+
Sbjct: 157 RIIFERWLSWNP-NPSAWDAYINYEKRYDEYDNAREIY 193
Score = 36.2 bits (82), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 29/142 (20%)
Query: 14 TLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHW-------MPDHEGWLSYIKFKLRY 66
T+ P+ +L+ YI +E+ LG R+++E+W+ + L+YI F+
Sbjct: 453 TVKPK-RKLFKFYIELEQKLGEWDRVRKLYEKWLELSLVGENNLSTINSLLTYIDFEKNI 511
Query: 67 NEVQRARHIFE---RL-------VQCHP--YNLSAWINFADFEMKMGEVDRARNVYECAV 114
E QR +FE RL + +P Y L +IN+ EM+ E AR++Y V
Sbjct: 512 QEHQRCISLFELGVRLAEDDKIFTKVNPLEYMLMQFINYYKEEMRYAE---ARSLYRKLV 568
Query: 115 EIFLADDHDEAEQLFVAFAKFE 136
E +++++FA FE
Sbjct: 569 E------RVSTPKVWISFALFE 584
>sp|Q6CJK2|CLF1_KLULA Pre-mRNA-splicing factor CLF1 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=CLF1 PE=3 SV=1
Length = 684
Score = 190 bits (483), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 116/391 (29%), Positives = 200/391 (51%), Gaps = 43/391 (10%)
Query: 2 IDHGRNAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEGWLSYIK 61
I+H RN DR PRVD+LW Y+ +EE+LGN R I+ RW + P + W S+I+
Sbjct: 113 INHARNLLDRATNALPRVDKLWFKYLLLEESLGNQGIVRGIYTRWCSFEPGPDAWDSFIE 172
Query: 62 FKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEI---FL 118
F+ R + R+I+ + V HP + W+ + FE G++ R V+ A++ F
Sbjct: 173 FETRCLNFENVRNIYSKFVLVHP-QIDTWLKWVRFEQTHGDISSVRTVFSFALDTLTSFS 231
Query: 119 ADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQY 178
+ E++ +FA +E + E +R+R +Y+ A++R P A L + + FEK++
Sbjct: 232 GTPLVDIERVIGSFASWE---ASQGEYERSRTLYRLAVERWPISEA--LKEQQIQFEKKF 286
Query: 179 GDREGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIANVP 238
G + +ED + K + +YE ++ +P +Y TW+ YI L E QE++ ++ I
Sbjct: 287 GSSKNMEDIVIAKRKAEYEQYLKSDPYHYSTWWVYIDLVEE-KYQEQLTSAFQSFIELAK 345
Query: 239 PAE--EKRYWQRYIYLWINYALYKEVDAGDLERTRDVYR--------------TLFIFYF 282
P + W+RYI + + Y +Y E+ DL R VY+ L+I Y
Sbjct: 346 PKSLVKDSSWKRYIRICVRYLVYLELTINDLPTIRSVYQDILDIIPHKKFTFGKLWIMYA 405
Query: 283 SFSPRME-----------------ERRIFKKYIEMELCLGNIDPCRKLYEKYLEWSPENC 325
F R + ++FK YI +E+ L D RKLYEKY++++P +
Sbjct: 406 EFEIRQNNLLKARKILGVSLGKSPKPKVFKYYINLEIRLKEFDRVRKLYEKYIDFNPSSV 465
Query: 326 YAWSKYTELEKSLDETERARAIFELAIAQPI 356
+W Y ELE++L + +R+R I++++++ +
Sbjct: 466 QSWLDYAELEENLGDEDRSRGIYDISMSNNV 496
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 108/255 (42%), Gaps = 32/255 (12%)
Query: 70 QRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLADDHDEAEQLF 129
+R R +E +++ + +L W+ +A FE ++ RAR++YE A+ + DH
Sbjct: 46 RRKRTEYETVLKRNRLDLRQWMRYAQFEFDQKDIRRARSIYERALLV----DHG----FI 97
Query: 130 VAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYGDREGIEDAIA 189
+ ++ + K + AR + A + +P R + L+ K+L E+ G+ +GI I
Sbjct: 98 PLWIQYIDSEIKWKNINHARNLLDRATNALP--RVDKLWFKYLLLEESLGN-QGIVRGIY 154
Query: 190 GKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIANVPPAEEKRYWQRY 249
+ +E G D W +I E R N E VR +Y + + P + W R+
Sbjct: 155 TRW-CSFEPGP-------DAWDSFIEFETRCLNFENVRNIYSKFVLVHPQIDTWLKWVRF 206
Query: 250 IYLWINYALYKEVDAGDLERTRDVYRTLF--IFYFSFSPRMEERRIFKKYIEMELCLGNI 307
E GD+ R V+ + FS +P ++ R+ + E G
Sbjct: 207 -----------EQTHGDISSVRTVFSFALDTLTSFSGTPLVDIERVIGSFASWEASQGEY 255
Query: 308 DPCRKLYEKYLEWSP 322
+ R LY +E P
Sbjct: 256 ERSRTLYRLAVERWP 270
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 139/325 (42%), Gaps = 41/325 (12%)
Query: 52 DHEGWLSYIKFKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYE 111
D W+ Y +F+ +++RAR I+ER + + WI + D E+K ++ ARN+ +
Sbjct: 62 DLRQWMRYAQFEFDQKDIRRARSIYERALLVDHGFIPLWIQYIDSEIKWKNINHARNLLD 121
Query: 112 CAVEIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKF 171
A ++L+ + EE N R IY P D + F
Sbjct: 122 RATNAL-----PRVDKLWFKYLLLEESLGN---QGIVRGIYTRWCSFEP---GPDAWDSF 170
Query: 172 LAFEKQYGDREGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYE 231
+ FE + + E + + Y V +P DTW ++R E+ G+ VR V+
Sbjct: 171 IEFETRCLNFENVRNI--------YSKFVLVHP-QIDTWLKWVRFEQTHGDISSVRTVFS 221
Query: 232 RAI------ANVPPAEEKRYWQRYIYLWINYALYKEVDAGDLERTRDVYRTLFIFYFSFS 285
A+ + P + +R + W E G+ ER+R +YR L + + S
Sbjct: 222 FALDTLTSFSGTPLVDIERVIGSFAS-W-------EASQGEYERSRTLYR-LAVERWPIS 272
Query: 286 PRMEERRI-FKKYIEMELCLGNIDPCRKL--YEKYLEWSPENCYAWSKYTEL--EKSLDE 340
++E++I F+K + +I ++ YE+YL+ P + W Y +L EK ++
Sbjct: 273 EALKEQQIQFEKKFGSSKNMEDIVIAKRKAEYEQYLKSDPYHYSTWWVYIDLVEEKYQEQ 332
Query: 341 TERARAIFELAIAQPILDLPEFLWK 365
A F + +A+P + + WK
Sbjct: 333 LTSAFQSF-IELAKPKSLVKDSSWK 356
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 78/387 (20%), Positives = 143/387 (36%), Gaps = 73/387 (18%)
Query: 6 RNAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEGWL-------- 57
RN + + V + P++D W ++R E+ G+++ R +F + + G
Sbjct: 184 RNIYSKFVLVHPQIDT-WLKWVRFEQTHGDISSVRTVFSFALDTLTSFSGTPLVDIERVI 242
Query: 58 -SYIKFKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVY----EC 112
S+ ++ E +R+R ++ V+ P + + FE K G ++ +
Sbjct: 243 GSFASWEASQGEYERSRTLYRLAVERWPISEALKEQQIQFEKKFGSSKNMEDIVIAKRKA 302
Query: 113 AVEIFLADD---------------HDEAEQLFVAFAKFEEMG------------------ 139
E +L D EQL AF F E+
Sbjct: 303 EYEQYLKSDPYHYSTWWVYIDLVEEKYQEQLTSAFQSFIELAKPKSLVKDSSWKRYIRIC 362
Query: 140 --------CNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYGDREGIEDAIAGK 191
+ R +Y+ LD IP + + K ++ R+ + + +
Sbjct: 363 VRYLVYLELTINDLPTIRSVYQDILDIIPHKKF--TFGKLWIMYAEFEIRQN--NLLKAR 418
Query: 192 MRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIANVPPAEEKRYWQRYIY 251
L G P + YI LE R+ +RVR++YE+ I P + +
Sbjct: 419 KILGVSLGKSPKPKVFKY---YINLEIRLKEFDRVRKLYEKYIDFNPSS---------VQ 466
Query: 252 LWINYALYKEVDAGDLERTRDVYRTLFIFYFSFSPRMEERRIFKKYIEMELCLGNIDPCR 311
W++YA +E + GD +R+R +Y S ++ + ++YI E + R
Sbjct: 467 SWLDYAELEE-NLGDEDRSRGIYDISMSNNVGLS-ESDQLIVIQRYIAFETDAAEYEKAR 524
Query: 312 KLYEKYLEWSPENCYAWSKYTELEKSL 338
+LYEKYL S + W E ++
Sbjct: 525 ELYEKYLILSRYDVNIWINQALFESTI 551
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 91/201 (45%), Gaps = 18/201 (8%)
Query: 3 DHGRNAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMH---WMPDHEGWLS- 58
D R +++ + +P Q W +Y +EENLG+ +R I++ M + + + +
Sbjct: 448 DRVRKLYEKYIDFNPSSVQSWLDYAELEENLGDEDRSRGIYDISMSNNVGLSESDQLIVI 507
Query: 59 --YIKFKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEI 116
YI F+ E ++AR ++E+ + Y+++ WIN A FE + + Y+ + +
Sbjct: 508 QRYIAFETDAAEYEKARELYEKYLILSRYDVNIWINQALFESTIP-TETQLIAYQQSHQD 566
Query: 117 FLADDHDEAEQLFVAFAKFEEMGCNCKETDRA---RCIYKFALDRIPKGRAEDLYRKFLA 173
DD E E F E+ K RA + I F K R + L + L
Sbjct: 567 GNFDDDGEEEFSF-------EITPENKHHTRAIFEKAISYFKEHNEDKKRQQVL-QSLLE 618
Query: 174 FEKQYGDREGIEDAIAGKMRL 194
+EK +G++E +E A + L
Sbjct: 619 YEKVHGNQETLEKVNARQPSL 639
>sp|Q5AED6|CLF1_CANAL Pre-mRNA-splicing factor CLF1 OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=CLF1 PE=3 SV=2
Length = 758
Score = 184 bits (467), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 204/414 (49%), Gaps = 56/414 (13%)
Query: 2 IDHGRNAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEGWLSYIK 61
I+H RN +R + PRV++LW Y++ EE L N R +FERW+ W PD W +YI
Sbjct: 171 INHARNLMERAINTLPRVNKLWFLYVQTEEMLKNYPMVRAVFERWLDWHPDTSVWDAYIN 230
Query: 62 FKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMG--EVDRARNVYECAVEIFLA 119
F+ RY E + R IF++ V P N W + +EM+ +V+ R V+E AV+ L+
Sbjct: 231 FEARYEEKENVRTIFKKYVHEFP-NAGTWYKWIKYEMENNRDDVNTVRAVFESAVDTLLS 289
Query: 120 D---DHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDR------IPKGRAEDLYRK 170
+ ++D+ E+ + + +C E RA I+K LD I +Y
Sbjct: 290 NKSEENDDDEEFATIISSWTSWEVSCGEASRANEIFKLLLDNKTNKLEISDKTKSSIYTA 349
Query: 171 FLAFEKQYGDREGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVY 230
F+ FEK +G+++ IE ++ K R++YE ++ +P +YD+W+ Y+ L + N+ + +
Sbjct: 350 FVEFEKNFGNKDSIEQSVLIKRRIKYEQEIQNDPYDYDSWWKYMTLLQNSSNKSDLENAF 409
Query: 231 ERAIANVPPAEEKRY-WQRYIYLWINYALYKEVDAGDLERTRDVYRT------------- 276
++ NV + K W+RYI WI YA ++E+ + + R+++
Sbjct: 410 KKVTGNVVHDKHKSIKWRRYIMFWIWYAFWEEMTNNNPDSAREIWNNCLKVIPHKSFTFA 469
Query: 277 -LFIFYFSFSPRMEER-----------------------RIFKKYIEMELCLGNIDPCRK 312
++I Y F R E +IFK YI++E LG+ + R
Sbjct: 470 KVWIGYSEFELRNSEDGLAKARKILGRAIGQTSINKPKIKIFKYYIDLEKKLGDWNRVRL 529
Query: 313 LYEKYLEWS----PENCYAWSKYTELEKSLDETERARAIFELAIAQPILDLPEF 362
L++K+LE S + KY E E S++E +R +I L+ A+ + + PE+
Sbjct: 530 LFQKWLEVSLLTTSSSELVIEKYVEFESSIEEYDRCDSI--LSSARQLSENPEY 581
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 6/97 (6%)
Query: 253 WINYALYKEVDAGDLERTRDVYRTLFIFYFSFSPRMEERRIFKKYIEMELCLGNIDPCRK 312
W YA ++ + D R R + P + +YI++EL NI+ R
Sbjct: 123 WTRYAKWEIENNHDFPRARSILERALDVNIQHVP------FWIQYIQLELSHKNINHARN 176
Query: 313 LYEKYLEWSPENCYAWSKYTELEKSLDETERARAIFE 349
L E+ + P W Y + E+ L RA+FE
Sbjct: 177 LMERAINTLPRVNKLWFLYVQTEEMLKNYPMVRAVFE 213
>sp|Q750X3|CLF1_ASHGO Pre-mRNA-splicing factor CLF1 OS=Ashbya gossypii (strain ATCC 10895
/ CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CLF1 PE=3
SV=1
Length = 683
Score = 181 bits (459), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 118/388 (30%), Positives = 193/388 (49%), Gaps = 43/388 (11%)
Query: 2 IDHGRNAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEGWLSYIK 61
++H RN R L PRVD+LW Y+ MEE+LG V R ++ +W P W +++
Sbjct: 110 VNHARNLLVRATALLPRVDKLWYKYVLMEESLGQVELVRGVYTKWCTLEPAAAAWDAFVD 169
Query: 62 FKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEI---FL 118
F+ R +V+ R ++ R V HP + W+ + FE K G+ R VY A + F
Sbjct: 170 FETRQGQVEHVREVYSRYVMVHPVA-ATWLKWVAFERKHGDAGTVRRVYSLACDTLTAFA 228
Query: 119 ADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQY 178
D E EQL V+FA++E +E +R+R + A+ R P+ + L EK++
Sbjct: 229 GADVHEVEQLVVSFAEWE---ATQQELERSRAVLSVAVSRWPE--SSTLKDATAQLEKKF 283
Query: 179 GDREGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIANVP 238
G E +I K + +YE+ + +P++YD W+ Y+ L E E + E + VP
Sbjct: 284 GGARAGE-SILFKRKREYEEQLLAHPLDYDAWWLYLDLLEESFPAELRAALAEATVKAVP 342
Query: 239 PAEEKRY-WQRYIYLWINYALYKEVDAGDLERTRDVYRTL---------------FIFYF 282
++EK W++Y+ LW+ Y L+ E D + TR +Y+ L +I Y
Sbjct: 343 RSQEKDMQWRKYVNLWLRYLLFLETVLVDSDLTRSMYQKLVREVIPNTKFTFAKAWIMYA 402
Query: 283 SFSPRME-----------------ERRIFKKYIEMELCLGNIDPCRKLYEKYLEWSPENC 325
F R E + ++F+ YI++E+ L D R+L+EK LE+ P+
Sbjct: 403 EFEIRQEKLDKARKILGMSLGMCPKPKLFQYYIDLEIKLKEFDRVRRLHEKLLEFQPDVL 462
Query: 326 YAWSKYTELEKSLDETERARAIFELAIA 353
W +Y ELE++L + +RAR I+E+ +
Sbjct: 463 SNWIEYAELEENLGDEDRARGIYEIGLT 490
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 23/161 (14%)
Query: 191 KMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIANVPPAEEKRYWQRYI 250
+ R ++E+ +++N ++ W Y E + R R V+ERA+A V P + +
Sbjct: 44 RKRSEFEEALKRNRLDVRQWLRYAAFEYEQRDMRRARSVFERALA-VAPGD--------V 94
Query: 251 YLWINYALYKEVDAGDLE-RTRDV--YRTLFIFYFSFSPRMEERRIFKKYIEMELCLGNI 307
+W+ Y D E R RDV R L + + PR++ +++ KY+ ME LG +
Sbjct: 95 VVWLRYV--------DCELRARDVNHARNLLVRATALLPRVD--KLWYKYVLMEESLGQV 144
Query: 308 DPCRKLYEKYLEWSPENCYAWSKYTELEKSLDETERARAIF 348
+ R +Y K+ P AW + + E + E R ++
Sbjct: 145 ELVRGVYTKWCTLEPAAA-AWDAFVDFETRQGQVEHVREVY 184
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 79/182 (43%), Gaps = 20/182 (10%)
Query: 52 DHEGWLSYIKFKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYE 111
D WL Y F+ +++RAR +FER + P ++ W+ + D E++ +V+ ARN+
Sbjct: 59 DVRQWLRYAAFEYEQRDMRRARSVFERALAVAPGDVVVWLRYVDCELRARDVNHARNLLV 118
Query: 112 CAVEIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKF 171
A + ++L+ + EE + + + R +Y P A D F
Sbjct: 119 RATALL-----PRVDKLWYKYVLMEE---SLGQVELVRGVYTKWCTLEPAAAAWD---AF 167
Query: 172 LAFEKQYGDREGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYE 231
+ FE + G E + + Y V +P+ TW ++ E + G+ VR VY
Sbjct: 168 VDFETRQGQVEHVREV--------YSRYVMVHPVAA-TWLKWVAFERKHGDAGTVRRVYS 218
Query: 232 RA 233
A
Sbjct: 219 LA 220
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 109/281 (38%), Gaps = 32/281 (11%)
Query: 70 QRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLADDHDEAEQLF 129
+R R FE ++ + ++ W+ +A FE + ++ RAR+V+E A+ + D
Sbjct: 43 RRKRSEFEEALKRNRLDVRQWLRYAAFEYEQRDMRRARSVFERALAVAPGD--------V 94
Query: 130 VAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYGDREGIEDAIA 189
V + ++ + ++ + AR + A +P R + L+ K++ E+ G E +
Sbjct: 95 VVWLRYVDCELRARDVNHARNLLVRATALLP--RVDKLWYKYVLMEESLGQVELV----- 147
Query: 190 GKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIANVPPAEEKRYWQRY 249
R Y P W ++ E R G E VREVY R + P A
Sbjct: 148 ---RGVYTKWCTLEPAAA-AWDAFVDFETRQGQVEHVREVYSRYVMVHPVAA-------- 195
Query: 250 IYLWINYALYKEVDAGDLERTRDVYRTL--FIFYFSFSPRMEERRIFKKYIEMELCLGNI 307
W+ + + E GD R VY + F+ + E ++ + E E +
Sbjct: 196 --TWLKWVAF-ERKHGDAGTVRRVYSLACDTLTAFAGADVHEVEQLVVSFAEWEATQQEL 252
Query: 308 DPCRKLYEKYLEWSPENCYAWSKYTELEKSLDETERARAIF 348
+ R + + PE+ +LEK +I
Sbjct: 253 ERSRAVLSVAVSRWPESSTLKDATAQLEKKFGGARAGESIL 293
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 14/108 (12%)
Query: 3 DHGRNAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEGWLS---- 58
D R ++++ P V W Y +EENLG+ AR I+E + +G LS
Sbjct: 445 DRVRRLHEKLLEFQPDVLSNWIEYAELEENLGDEDRARGIYEIGL----TADGGLSQARQ 500
Query: 59 ------YIKFKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKM 100
YI+F+ +E +RAR ++ R V Y+ + WI+ A +E +
Sbjct: 501 LQLMQRYIQFETDASEFERARALYSRYVALSGYDPNVWISCALYESSV 548
Score = 35.0 bits (79), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 213 YIRLEERVGNQERVREVYERAIANVPPAEEKRYWQRYIYLWINYALYKEVDAGDLERTRD 272
YI LE ++ +RVR ++E+ + P + WI YA +E + GD +R R
Sbjct: 434 YIDLEIKLKEFDRVRRLHEKLLEFQPDV---------LSNWIEYAELEE-NLGDEDRARG 483
Query: 273 VYRTLFIFYFSFSPRMEERRIFKKYIEMELCLGNIDPCRKLYEKYLEWSPENCYAW 328
+Y S + + ++ ++YI+ E + R LY +Y+ S + W
Sbjct: 484 IYEIGLTADGGLS-QARQLQLMQRYIQFETDASEFERARALYSRYVALSGYDPNVW 538
>sp|Q12309|CLF1_YEAST Pre-mRNA-splicing factor CLF1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=CLF1 PE=1 SV=1
Length = 687
Score = 179 bits (454), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 118/393 (30%), Positives = 201/393 (51%), Gaps = 51/393 (12%)
Query: 2 IDHGRNAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEGWLSYIK 61
I+H RN +R ++ PRVD+LW Y+ +EE+L NV R ++ +W P W S++
Sbjct: 115 INHARNLMNRAISTLPRVDKLWYKYLIVEESLNNVEIVRSLYTKWCSLEPGVNAWNSFVD 174
Query: 62 FKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLADD 121
F++R R I+ + V HP + W+ + FE + G + R+VY A++ +A+
Sbjct: 175 FEIRQKNWNGVREIYSKYVMAHP-QMQTWLKWVRFENRHGNTEFTRSVYSLAIDT-VANL 232
Query: 122 HD-------EAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAF 174
+ E +L +FA +E +E +R+ +Y+ A+++ P + L L F
Sbjct: 233 QNLQIWSDMEVAKLVNSFAHWE---AAQQEYERSSALYQIAIEKWPSNQL--LKAGLLDF 287
Query: 175 EKQYGDREGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRL-EERVGNQERVREVYERA 233
EKQ+GD IE+ I+ K +++YE + N +YDTW+ Y+ L E Q + + +E+A
Sbjct: 288 EKQFGDINSIEETISYKRKMEYETILSNNAYDYDTWWLYLDLISESFPKQ--IMQTFEKA 345
Query: 234 IANVPPAEEKR--YWQRYIYLWINYALY-------KEVDAGDLERTRD--------VYRT 276
I + P E + W+RYIYLW+ Y Y ++ +R D +
Sbjct: 346 IVDSRPKELSKNVQWKRYIYLWMRYICYVELELENSLLEEELFQRLIDDIIPHKHFTFSK 405
Query: 277 LFIFYFSFSPRMEE----RRI-------------FKKYIEMELCLGNIDPCRKLYEKYLE 319
+++ Y F R ++ R+I FK YIE+E+ L D RK+YEK++E
Sbjct: 406 IWLMYAKFLIRHDDVPKARKILGKAIGLCPKAKTFKGYIELEVKLKEFDRVRKIYEKFIE 465
Query: 320 WSPENCYAWSKYTELEKSLDETERARAIFELAI 352
+ P + WS+Y ELE++L + +R R I+ +A+
Sbjct: 466 FQPSDLQIWSQYGELEENLGDWDRVRGIYTIAL 498
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 84/195 (43%), Gaps = 20/195 (10%)
Query: 52 DHEGWLSYIKFKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYE 111
D W+ Y +F++ ++++RAR IFER + + WI + D E+K+ ++ ARN+
Sbjct: 64 DMGQWIRYAQFEIEQHDMRRARSIFERALLVDSSFIPLWIRYIDAELKVKCINHARNLMN 123
Query: 112 CAVEIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKF 171
A+ ++L+ + EE N + R +Y P A + F
Sbjct: 124 RAISTL-----PRVDKLWYKYLIVEESLNNV---EIVRSLYTKWCSLEPGVNA---WNSF 172
Query: 172 LAFEKQYGDREGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYE 231
+ FE + + G+ + Y V +P TW ++R E R GN E R VY
Sbjct: 173 VDFEIRQKNWNGVREI--------YSKYVMAHP-QMQTWLKWVRFENRHGNTEFTRSVYS 223
Query: 232 RAIANVPPAEEKRYW 246
AI V + + W
Sbjct: 224 LAIDTVANLQNLQIW 238
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 95/228 (41%), Gaps = 25/228 (10%)
Query: 20 DQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEGWLSYIKFKLRYNEVQRARHIFERL 79
++W Y + +V AR+I + + P + + YI+ +++ E R R I+E+
Sbjct: 404 SKIWLMYAKFLIRHDDVPKARKILGKAIGLCPKAKTFKGYIELEVKLKEFDRVRKIYEKF 463
Query: 80 VQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLADDHDEAEQLFVAFAKFEEMG 139
++ P +L W + + E +G+ DR R +Y A++ D E V K+
Sbjct: 464 IEFQPSDLQIWSQYGELEENLGDWDRVRGIYTIALD--ENSDFLTKEAKIVLLQKYITFE 521
Query: 140 CNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYGDREGIEDAI---AGKMRLQY 196
+E ++AR LYR++L QY + IE A+ + Q
Sbjct: 522 TESQEFEKAR----------------KLYRRYLEL-NQYSPQSWIEFAMYQTSTPTEQQL 564
Query: 197 EDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIANVPPAEEKR 244
D + N D + I E N+ R+V+E AI ++K+
Sbjct: 565 LDLAKLQSENVD---EDIEFEITDENKLEARKVFEEAIVFFKEKDDKQ 609
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 13/147 (8%)
Query: 209 TWFDYIRLEERVGNQERVREVYERAIANVPPAEEKRYWQRYIYLWINYALYKEVDAGDLE 268
T+ YI LE ++ +RVR++YE+ I P + +W Y +E + GD +
Sbjct: 439 TFKGYIELEVKLKEFDRVRKIYEKFIEFQPSD---------LQIWSQYGELEE-NLGDWD 488
Query: 269 RTRDVYRTLFIFYFSFSPRMEERRIFKKYIEMELCLGNIDPCRKLYEKYLEWSPENCYAW 328
R R +Y F + + + +KYI E + RKLY +YLE + + +W
Sbjct: 489 RVRGIYTIALDENSDFLTKEAKIVLLQKYITFETESQEFEKARKLYRRYLELNQYSPQSW 548
Query: 329 SKYTELEKSLDETERARAIFELAIAQP 355
++ + S T + + +LA Q
Sbjct: 549 IEFAMYQTS---TPTEQQLLDLAKLQS 572
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 253 WINYALYKEVDAGDLERTRDVYRTLFIFYFSFSPRMEERRIFKKYIEMELCLGNIDPCRK 312
WI YA + E++ D+ R R ++ + SF P ++ +YI+ EL + I+ R
Sbjct: 68 WIRYAQF-EIEQHDMRRARSIFERALLVDSSFIP------LWIRYIDAELKVKCINHARN 120
Query: 313 LYEKYLEWSPENCYAWSKYTELEKSLDETERARAIF 348
L + + P W KY +E+SL+ E R+++
Sbjct: 121 LMNRAISTLPRVDKLWYKYLIVEESLNNVEIVRSLY 156
>sp|Q6FW76|CLF1_CANGA Pre-mRNA-splicing factor CLF1 OS=Candida glabrata (strain ATCC 2001
/ CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=CLF1
PE=3 SV=1
Length = 695
Score = 167 bits (424), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 190/396 (47%), Gaps = 47/396 (11%)
Query: 1 FIDHGRNAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEGWLSYI 60
+I+H RN +R +T PRVD+LW Y+ +EE+L + R +F++W P W S+
Sbjct: 110 YINHARNILERAITKLPRVDKLWYKYLIVEESLAHFDIVRNLFQKWCSLEPAAHVWDSFT 169
Query: 61 KFKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLAD 120
F++R + R+I+ + V HP S W + +FE++ G R+VY A++ +A
Sbjct: 170 DFEVRQERYEDVRNIYSKYVLIHP-QFSTWRKWINFEVRYGSTKTVRSVYSLALDALIAY 228
Query: 121 DH------DEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAF 174
D+ L V F+K+E + KE R++ + + A+ + PK L L F
Sbjct: 229 SESRNELVDDCINLIVEFSKWEALQ---KEYIRSKSLLEIAIQKWPKSNT--LNNALLQF 283
Query: 175 EKQYGDREGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAI 234
E+++G E +E+ I + YED + + +YDTW Y++L E + V E + +
Sbjct: 284 EREHGTAETLENTIILNRKKHYEDILNEKVYDYDTWLLYLQLLEN-NYPKLVMEAFSNVL 342
Query: 235 -ANVPPAEEK-RYWQRYIYLWINYALYKEVDAGDL--------ERTRDV-------YRTL 277
A +P + K +YW++YI +WI Y + E+ D+ E ++ + +
Sbjct: 343 NAAIPTSRTKDKYWKQYILIWIKYLTFLELTINDIPLCGQKFEELIHNIIPNDDFTFSKI 402
Query: 278 FIFYFSFSPRME-----------------ERRIFKKYIEMELCLGNIDPCRKLYEKYLEW 320
+I Y F R + +R+ FK YI++E L D R LYE +L++
Sbjct: 403 WILYAEFEIRQDNLEKARSILGRSLGLCPKRKTFKYYIDLETKLREFDRVRILYENFLKF 462
Query: 321 SPENCYAWSKYTELEKSLDETERARAIFELAIAQPI 356
P N W Y E E SL + R R++ + I I
Sbjct: 463 DPLNLDTWRAYVEFEDSLGDEVRVRSVCMIPIQNNI 498
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 20/193 (10%)
Query: 52 DHEGWLSYIKFKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYE 111
D + W+ Y F++ ++++RAR IFER ++ H + WI + + E+K+G ++ ARN+ E
Sbjct: 60 DVKQWMRYAVFEIEQHDMRRARSIFERALRVHISYVPLWIRYIESELKLGYINHARNILE 119
Query: 112 CAVEIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKF 171
A+ ++L+ + EE + D R +++ P D + F
Sbjct: 120 RAITKL-----PRVDKLWYKYLIVEE---SLAHFDIVRNLFQKWCSLEPAAHVWDSFTDF 171
Query: 172 LAFEKQYGDREGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYE 231
+++Y D I Y V +P + TW +I E R G+ + VR VY
Sbjct: 172 EVRQERYEDVRNI-----------YSKYVLIHP-QFSTWRKWINFEVRYGSTKTVRSVYS 219
Query: 232 RAIANVPPAEEKR 244
A+ + E R
Sbjct: 220 LALDALIAYSESR 232
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 81/170 (47%), Gaps = 15/170 (8%)
Query: 90 WINFADF-EMKMGEVDRARNVYECAVEIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRA 148
WI + F E+ + ++ +E + + +D ++++ +A+FE N ++A
Sbjct: 363 WIKYLTFLELTINDIPLCGQKFEELIHNIIPNDDFTFSKIWILYAEFEIRQDNL---EKA 419
Query: 149 RCIYKFALDRIPKGRAEDLYRKFLAFEKQYGDREGIEDAIAGKMRLQYEDGVRKNPMNYD 208
R I +L PK + ++ ++ E + + + ++R+ YE+ ++ +P+N D
Sbjct: 420 RSILGRSLGLCPKRKT---FKYYIDLETKLREFD--------RVRILYENFLKFDPLNLD 468
Query: 209 TWFDYIRLEERVGNQERVREVYERAIANVPPAEEKRYWQRYIYLWINYAL 258
TW Y+ E+ +G++ RVR V I N K + + + I+Y +
Sbjct: 469 TWRAYVEFEDSLGDEVRVRSVCMIPIQNNIGLFSKSFQLHLLEILIDYEM 518
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 253 WINYALYKEVDAGDLERTRDVYRTLFIFYFSFSPRMEERRIFKKYIEMELCLGNIDPCRK 312
W+ YA++ E++ D+ R R ++ + S+ P ++ +YIE EL LG I+ R
Sbjct: 64 WMRYAVF-EIEQHDMRRARSIFERALRVHISYVP------LWIRYIESELKLGYINHARN 116
Query: 313 LYEKYLEWSPENCYAWSKYTELEKSLDETERARAIFE 349
+ E+ + P W KY +E+SL + R +F+
Sbjct: 117 ILERAITKLPRVDKLWYKYLIVEESLAHFDIVRNLFQ 153
Score = 39.7 bits (91), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 112/299 (37%), Gaps = 57/299 (19%)
Query: 21 QLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEGWLSYIKFKLRYNEVQRARHIFERLV 80
++W Y E N+ AR I R + P + + YI + + E R R ++E +
Sbjct: 401 KIWILYAEFEIRQDNLEKARSILGRSLGLCPKRKTFKYYIDLETKLREFDRVRILYENFL 460
Query: 81 QCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLADDHDEAEQLFVAFAKFEEMGC 140
+ P NL W + +FE +G+ R R+V C + I + F+K
Sbjct: 461 KFDPLNLDTWRAYVEFEDSLGDEVRVRSV--CMIPI---------QNNIGLFSK------ 503
Query: 141 NCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYGDREGIEDAIAGKMRLQYEDGV 200
F L L + +E +Y + + IE + ++ L
Sbjct: 504 ------------SFQLH---------LLEILIDYEMEYQNFDNIEPLLKKQVEL------ 536
Query: 201 RKNPMNYDTWFDYIRLEERVGNQERVREVYERAIANVPPAEEKRYWQRYIYLWINYALYK 260
+ + W DY + V +E+V+ N +E+R
Sbjct: 537 --SNFTVEAWTDYAMKKLTVPTEEQVQ--------NFQIMKEERLKDSSALDEQEIEFEF 586
Query: 261 EVDAGDLERTRDVYRTLFIFYFSFSPRMEER-RIFKKYIEMELCLGNIDPCRKLYEKYL 318
E+ + + RDV+ + YF R E+R RI + Y++ E G+I R+ EK L
Sbjct: 587 EITDNNKDNARDVFERA-LNYFKEIKRDEDRARILQSYVDFEGQYGDI-SSRQRIEKRL 643
>sp|Q14690|RRP5_HUMAN Protein RRP5 homolog OS=Homo sapiens GN=PDCD11 PE=1 SV=3
Length = 1871
Score = 72.4 bits (176), Expect = 5e-12, Method: Composition-based stats.
Identities = 65/278 (23%), Positives = 119/278 (42%), Gaps = 33/278 (11%)
Query: 1 FIDHGR-----NAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEG 55
+D GR + +DR+V SP LW Y+ + AR + ER + + E
Sbjct: 1595 LMDPGRQPESADDFDRLVLSSPNSSILWLQYMAFHLQATEIEKARAVAERALKTISFREE 1654
Query: 56 ------WLSYIKFKLRYNEVQRARHIFERLVQCHPYN--LSAWINFADFEMKMGEVDRAR 107
W++ + + Y + +FER VQ YN L +++ AD K + A
Sbjct: 1655 QEKLNVWVALLNLENMYGSQESLTKVFERAVQ---YNEPLKVFLHLADIYAKSEKFQEAG 1711
Query: 108 NVYECAVEIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDL 167
+Y ++ F + + +++ + F + R + + AL+ +P D+
Sbjct: 1712 ELYNRMLKRF-----RQEKAVWIKYGAFLLRRSQAAASHR---VLQRALECLPSKEHVDV 1763
Query: 168 YRKFLAFEKQYGDREGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVR 227
KF E Q GD E + + +E+ + P D W YI + + G+Q+ VR
Sbjct: 1764 IAKFAQLEFQLGDAE--------RAKAIFENTLSTYPKRTDVWSVYIDMTIKHGSQKDVR 1815
Query: 228 EVYERAI-ANVPPAEEKRYWQRYIYLWINYALYKEVDA 264
+++ER I ++ P K +++RY+ + K+V A
Sbjct: 1816 DIFERVIHLSLAPKRMKFFFKRYLDYEKQHGTEKDVQA 1853
Score = 51.2 bits (121), Expect = 1e-05, Method: Composition-based stats.
Identities = 45/241 (18%), Positives = 106/241 (43%), Gaps = 18/241 (7%)
Query: 2 IDHGRNAWDRVV-TLSPRVDQ----LWNNYIRMEENLGNVAGARQIFERWMHWMPDHEGW 56
I+ R +R + T+S R +Q +W + +E G+ ++FER + + + +
Sbjct: 1635 IEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQESLTKVFERAVQYNEPLKVF 1694
Query: 57 LSYIKFKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEI 116
L + + Q A ++ R+++ + WI + F ++ + + V + A+E
Sbjct: 1695 LHLADIYAKSEKFQEAGELYNRMLKRFRQEKAVWIKYGAFLLRRSQAAASHRVLQRALEC 1754
Query: 117 FLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEK 176
+ +H + AKF ++ + +RA+ I++ L PK D++ ++
Sbjct: 1755 LPSKEHVD------VIAKFAQLEFQLGDAERAKAIFENTLSTYPK--RTDVWSVYIDMTI 1806
Query: 177 QYGDREGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIAN 236
++G ++ + D + L ++ + + DY E++ G ++ V+ V +A+
Sbjct: 1807 KHGSQKDVRDIFERVIHLSL--APKRMKFFFKRYLDY---EKQHGTEKDVQAVKAKALEY 1861
Query: 237 V 237
V
Sbjct: 1862 V 1862
Score = 49.7 bits (117), Expect = 3e-05, Method: Composition-based stats.
Identities = 58/270 (21%), Positives = 111/270 (41%), Gaps = 41/270 (15%)
Query: 76 FERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLADDHDEAEQLFVAFAKF 135
F+RLV P + W+ + F ++ E+++AR V E A++ + E ++VA
Sbjct: 1608 FDRLVLSSPNSSILWLQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNL 1667
Query: 136 EEMGCN----CKETDRA------RCIYKFALDRIPKG----RAEDLYRKFLAFEKQYGDR 181
E M + K +RA ++ D K A +LY + L K++
Sbjct: 1668 ENMYGSQESLTKVFERAVQYNEPLKVFLHLADIYAKSEKFQEAGELYNRML---KRFRQE 1724
Query: 182 EGI-----------EDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVY 230
+ + A A LQ + + D + +LE ++G+ ER + ++
Sbjct: 1725 KAVWIKYGAFLLRRSQAAASHRVLQRALECLPSKEHVDVIAKFAQLEFQLGDAERAKAIF 1784
Query: 231 ERAIANVPPAEEKRYWQRYIYLWINYALYKEVDAGDLERTRDVYRTLFIFYFSFSPRMEE 290
E ++ P + W YI + I + K+V RD++ + + S +P+
Sbjct: 1785 ENTLSTYP--KRTDVWSVYIDMTIKHGSQKDV--------RDIFER--VIHLSLAPK-RM 1831
Query: 291 RRIFKKYIEMELCLGNIDPCRKLYEKYLEW 320
+ FK+Y++ E G + + K LE+
Sbjct: 1832 KFFFKRYLDYEKQHGTEKDVQAVKAKALEY 1861
Score = 49.3 bits (116), Expect = 4e-05, Method: Composition-based stats.
Identities = 48/210 (22%), Positives = 82/210 (39%), Gaps = 32/210 (15%)
Query: 167 LYRKFLAFEKQYGDREGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERV 226
L+ +++AF Q + IE A A R R+ + W + LE G+QE +
Sbjct: 1621 LWLQYMAFHLQATE---IEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQESL 1677
Query: 227 REVYERAI------------ANVPPAEEK---------RYWQRYIY---LWINYALYKEV 262
+V+ERA+ A++ EK R +R+ +WI Y +
Sbjct: 1678 TKVFERAVQYNEPLKVFLHLADIYAKSEKFQEAGELYNRMLKRFRQEKAVWIKYGAFLLR 1737
Query: 263 DAGDLERTRDVYRTLFIFYFSFSPRMEERRIFKKYIEMELCLGNIDPCRKLYEKYLEWSP 322
+ R + R L P E + K+ ++E LG+ + + ++E L P
Sbjct: 1738 RSQAAASHRVLQRALECL-----PSKEHVDVIAKFAQLEFQLGDAERAKAIFENTLSTYP 1792
Query: 323 ENCYAWSKYTELEKSLDETERARAIFELAI 352
+ WS Y ++ + R IFE I
Sbjct: 1793 KRTDVWSVYIDMTIKHGSQKDVRDIFERVI 1822
>sp|Q6NS46|RRP5_MOUSE Protein RRP5 homolog OS=Mus musculus GN=Pdcd11 PE=2 SV=2
Length = 1862
Score = 69.7 bits (169), Expect = 3e-11, Method: Composition-based stats.
Identities = 65/278 (23%), Positives = 118/278 (42%), Gaps = 33/278 (11%)
Query: 1 FIDHGR-----NAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEG 55
+D GR + +DR+V SP LW Y+ + AR + ER + + E
Sbjct: 1586 LMDPGRQPESADDFDRLVLSSPNSSILWLQYMAFHLQATEIEKARAVAERALKTISFREE 1645
Query: 56 ------WLSYIKFKLRYNEVQRARHIFERLVQCHPYN--LSAWINFADFEMKMGEVDRAR 107
W++ + + Y + +FER VQ YN L +++ AD K + A
Sbjct: 1646 QEKLNVWVALLNLENMYGSQESLTKVFERAVQ---YNEPLKVFLHLADIYTKSEKYKEAG 1702
Query: 108 NVYECAVEIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDL 167
+Y ++ F + + +++ + F + R + + AL+ +P D+
Sbjct: 1703 ELYNRMLKRF-----RQEKAVWIKYGAFVLGRSQAGASHR---VLQRALECLPAKEHVDV 1754
Query: 168 YRKFLAFEKQYGDREGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVR 227
KF E Q GD E + + +E+ + P D W YI + + G+Q VR
Sbjct: 1755 IVKFAQLEFQLGDVE--------RAKAIFENTLSTYPKRTDVWSVYIDMTIKHGSQTAVR 1806
Query: 228 EVYERAI-ANVPPAEEKRYWQRYIYLWINYALYKEVDA 264
+++ER I ++ P K +++RY+ + K+V A
Sbjct: 1807 DIFERVIHLSLAPKRMKFFFKRYLDYEKQHGTEKDVQA 1844
Score = 48.5 bits (114), Expect = 8e-05, Method: Composition-based stats.
Identities = 47/242 (19%), Positives = 108/242 (44%), Gaps = 20/242 (8%)
Query: 2 IDHGRNAWDRVV-TLSPRVDQ----LWNNYIRMEENLGNVAGARQIFERWMHWMPDHEGW 56
I+ R +R + T+S R +Q +W + +E G+ ++FER + + + +
Sbjct: 1626 IEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQESLTKVFERAVQYNEPLKVF 1685
Query: 57 LSYIKFKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEI 116
L + + + A ++ R+++ + WI + F + + + V + A+E
Sbjct: 1686 LHLADIYTKSEKYKEAGELYNRMLKRFRQEKAVWIKYGAFVLGRSQAGASHRVLQRALEC 1745
Query: 117 FLADDHDEAEQLFVAFAKFE-EMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFE 175
A +H + + V FA+ E ++G + +RA+ I++ L PK D++ ++
Sbjct: 1746 LPAKEHVD---VIVKFAQLEFQLG----DVERAKAIFENTLSTYPK--RTDVWSVYIDMT 1796
Query: 176 KQYGDREGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIA 235
++G + + D + L ++ + + DY E++ G ++ V+ V +A+
Sbjct: 1797 IKHGSQTAVRDIFERVIHLSL--APKRMKFFFKRYLDY---EKQHGTEKDVQAVKAKALE 1851
Query: 236 NV 237
V
Sbjct: 1852 YV 1853
Score = 48.1 bits (113), Expect = 9e-05, Method: Composition-based stats.
Identities = 50/212 (23%), Positives = 83/212 (39%), Gaps = 36/212 (16%)
Query: 167 LYRKFLAFEKQYGDREGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERV 226
L+ +++AF Q + IE A A R R+ + W + LE G+QE +
Sbjct: 1612 LWLQYMAFHLQATE---IEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQESL 1668
Query: 227 REVYERAI------------ANVPPAEEK---------RYWQRYIY---LWINYALY--K 260
+V+ERA+ A++ EK R +R+ +WI Y +
Sbjct: 1669 TKVFERAVQYNEPLKVFLHLADIYTKSEKYKEAGELYNRMLKRFRQEKAVWIKYGAFVLG 1728
Query: 261 EVDAGDLERTRDVYRTLFIFYFSFSPRMEERRIFKKYIEMELCLGNIDPCRKLYEKYLEW 320
AG R + R L P E + K+ ++E LG+++ + ++E L
Sbjct: 1729 RSQAGASHRV--LQRALECL-----PAKEHVDVIVKFAQLEFQLGDVERAKAIFENTLST 1781
Query: 321 SPENCYAWSKYTELEKSLDETERARAIFELAI 352
P+ WS Y ++ R IFE I
Sbjct: 1782 YPKRTDVWSVYIDMTIKHGSQTAVRDIFERVI 1813
>sp|Q05022|RRP5_YEAST rRNA biogenesis protein RRP5 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RRP5 PE=1 SV=1
Length = 1729
Score = 62.8 bits (151), Expect = 4e-09, Method: Composition-based stats.
Identities = 54/236 (22%), Positives = 101/236 (42%), Gaps = 40/236 (16%)
Query: 43 FERWMHWMPDHEG-WLSYIKFKLRYNEVQRARHIFERLVQCHPY-----NLSAWINFADF 96
FER + P+ W++Y+ F+L+ +E+++AR + ER ++ + L+ WI +
Sbjct: 1464 FERLLIGNPNSSVVWMNYMAFQLQLSEIEKARELAERALKTINFREEAEKLNIWIAMLNL 1523
Query: 97 EMKMGEVDRARNVYECAVEIF--------------LADDHDEAEQLFVAFAK-------- 134
E G + V+ A + +++ D+A +LF A AK
Sbjct: 1524 ENTFGTEETLEEVFSRACQYMDSYTIHTKLLGIYEISEKFDKAAELFKATAKKFGGEKVS 1583
Query: 135 ----FEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYGDREGIEDAIAG 190
+ + + E AR I AL +PK ++ RKF E GD E
Sbjct: 1584 IWVSWGDFLISHNEEQEARTILGNALKALPKRNHIEVVRKFAQLEFAKGDPE-------- 1635
Query: 191 KMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIANVPPAEEKRYW 246
+ R +E V P D W Y+ E + ++++V +++ER I ++ +++
Sbjct: 1636 RGRSLFEGLVADAPKRIDLWNVYVDQEVKAKDKKKVEDLFERIITKKITRKQAKFF 1691
Score = 41.6 bits (96), Expect = 0.010, Method: Composition-based stats.
Identities = 39/215 (18%), Positives = 81/215 (37%), Gaps = 33/215 (15%)
Query: 167 LYRKFLAFEKQYGDREGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERV 226
++ ++AF+ Q + IE A R R+ + W + LE G +E +
Sbjct: 1477 VWMNYMAFQLQLSE---IEKARELAERALKTINFREEAEKLNIWIAMLNLENTFGTEETL 1533
Query: 227 REVYERAI-------------------------ANVPPAEEKRYWQRYIYLWINYALYKE 261
EV+ RA A + A K++ + +W+++ +
Sbjct: 1534 EEVFSRACQYMDSYTIHTKLLGIYEISEKFDKAAELFKATAKKFGGEKVSIWVSWGDFLI 1593
Query: 262 VDAGDLERTRDVYRTLFIFYFSFSPRMEERRIFKKYIEMELCLGNIDPCRKLYEKYLEWS 321
+ E RT+ P+ + +K+ ++E G+ + R L+E + +
Sbjct: 1594 SHNEEQEA-----RTILGNALKALPKRNHIEVVRKFAQLEFAKGDPERGRSLFEGLVADA 1648
Query: 322 PENCYAWSKYTELEKSLDETERARAIFELAIAQPI 356
P+ W+ Y + E + ++ +FE I + I
Sbjct: 1649 PKRIDLWNVYVDQEVKAKDKKKVEDLFERIITKKI 1683
Score = 40.8 bits (94), Expect = 0.015, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 56 WLSYIKFKLRYNEVQRARHIFERLVQCHPY--NLSAWINFADFEMKMGEVDRARNVYECA 113
W+S+ F + +NE Q AR I ++ P ++ FA E G+ +R R+++E
Sbjct: 1585 WVSWGDFLISHNEEQEARTILGNALKALPKRNHIEVVRKFAQLEFAKGDPERGRSLFEGL 1644
Query: 114 VEIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIY-KFALDRIPKGRAEDLYRKFL 172
V +A + + + + K+ + ++ + +I + +A+ + K+L
Sbjct: 1645 VA--------DAPKRIDLWNVYVDQEVKAKDKKKVEDLFERIITKKITRKQAKFFFNKWL 1696
Query: 173 AFEKQYGDREGIE 185
FE+ GD + IE
Sbjct: 1697 QFEESEGDEKTIE 1709
>sp|Q9FNS4|MBB1_CHLRE PsbB mRNA maturation factor Mbb1, chloroplastic OS=Chlamydomonas
reinhardtii GN=MBB1 PE=2 SV=1
Length = 662
Score = 58.5 bits (140), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/328 (19%), Positives = 129/328 (39%), Gaps = 51/328 (15%)
Query: 56 WLSYIKFKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVE 115
W ++ + R V+RAR +++ V + AW + E G RAR+++ ++
Sbjct: 199 WSAWGWLEARTGNVERARKLYDAAVVVDGTHACAWHKWGMLEKGQGNFTRARDLWMQGIQ 258
Query: 116 IFLADDHDEAEQLFVAFAKFEEMGCNCKETDR---ARCIYKFALDRIPKGRAEDLYRKFL 172
+ L+ A +GC + R AR ++ + L++ +
Sbjct: 259 RCRRKPQSQNAYLYNA------LGCMAAQLGRVGEARSWFEEGTRSAEGAASVALWQAWA 312
Query: 173 AFEKQYGDREGIE----DAIAGKMRLQY----------------------EDGVRKNPMN 206
E + GD + A+ R +Y G NP +
Sbjct: 313 VLEAKQGDPTVVRYLFRKALGANPRSRYVHLAWALWERRQGNPQHCLALLRRGCELNPTD 372
Query: 207 YDTWFDYIRLEERVGNQERVREVYERAIANVPPAEEKRYWQRYIYLWINYALYKEVDAGD 266
+ + +E++ G ER RE++E+ + P +Y+W Y + E + G+
Sbjct: 373 PALYQAWALVEKQAGRIERARELFEQGLRADP---------SDLYMWQAYGVM-EAEQGN 422
Query: 267 LERTRDVYRTLFIFYFSFSPRMEERRIFKKYIEMELCLGNIDPCRKLYEKYLEWSPENCY 326
++R R +++ ++ SP +F + +E GN+ R+L++ + P++
Sbjct: 423 MDRARQLFQE-GVWADPRSPSTVY--VFHAWGALEWQAGNVQTARELFKAAVRVDPKSET 479
Query: 327 AWSKYTELEKSLDETERARAIFELAIAQ 354
W+ + +E L E ER + EL I Q
Sbjct: 480 TWASWIAMESELGEIER---VDELRIRQ 504
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 121/297 (40%), Gaps = 47/297 (15%)
Query: 65 RYNEVQRARHIFE----RLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLAD 120
RY+E AR +++ +PY SAW E + G V+RAR +Y+ AV +
Sbjct: 176 RYDE---ARQLYQDGCANTGNVNPYIWSAW---GWLEARTGNVERARKLYDAAVVV---- 225
Query: 121 DHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRI---PKGRAEDLYRKFLAFEKQ 177
D A A+ K+ + RAR ++ + R P+ + LY Q
Sbjct: 226 DGTHA----CAWHKWGMLEKGQGNFTRARDLWMQGIQRCRRKPQSQNAYLYNALGCMAAQ 281
Query: 178 YGDREGIEDAIAGKMRLQYEDGVRK--NPMNYDTWFDYIRLEERVGNQERVREVYERAIA 235
G G+ R +E+G R + W + LE + G+ VR ++ +A+
Sbjct: 282 LGR--------VGEARSWFEEGTRSAEGAASVALWQAWAVLEAKQGDPTVVRYLFRKALG 333
Query: 236 NVPPAEEKRYWQRYIYLWINYALYKEVDAGDLERTRDVYRTLFIFYFSFSPRMEERRIFK 295
P + RY++L +AL++ R + L + + +++
Sbjct: 334 ANPRS-------RYVHL--AWALWER-------RQGNPQHCLALLRRGCELNPTDPALYQ 377
Query: 296 KYIEMELCLGNIDPCRKLYEKYLEWSPENCYAWSKYTELEKSLDETERARAIFELAI 352
+ +E G I+ R+L+E+ L P + Y W Y +E +RAR +F+ +
Sbjct: 378 AWALVEKQAGRIERARELFEQGLRADPSDLYMWQAYGVMEAEQGNMDRARQLFQEGV 434
Score = 40.0 bits (92), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 123/318 (38%), Gaps = 45/318 (14%)
Query: 2 IDHGRNAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWM------PDHEG 55
++ R +D V + W+ + +E+ GN AR + WM + P +
Sbjct: 212 VERARKLYDAAVVVDGTHACAWHKWGMLEKGQGNFTRARDL---WMQGIQRCRRKPQSQN 268
Query: 56 WLSYIKFKLRYNEVQR---ARHIFERLVQC--HPYNLSAWINFADFEMKMGEVDRARNVY 110
Y ++ R AR FE + +++ W +A E K G+ R ++
Sbjct: 269 AYLYNALGCMAAQLGRVGEARSWFEEGTRSAEGAASVALWQAWAVLEAKQGDPTVVRYLF 328
Query: 111 ECAVEIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRK 170
A+ + + + +A+A +E N + + + + P A LY+
Sbjct: 329 RKAL-----GANPRSRYVHLAWALWERRQGNPQHC---LALLRRGCELNPTDPA--LYQA 378
Query: 171 FLAFEKQYGDREGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVY 230
+ EKQ G E + R +E G+R +P + W Y +E GN +R R+++
Sbjct: 379 WALVEKQAGRIE--------RARELFEQGLRADPSDLYMWQAYGVMEAEQGNMDRARQLF 430
Query: 231 ERAIANVPPAEEKRYWQRYIYLWINYALYKEVDAGDLERTRDVYRTLFIFYFSFSPRMEE 290
+ + P + Y + W E AG+++ R+ LF P+ E
Sbjct: 431 QEGVWADPRSPSTVY---VFHAWGAL----EWQAGNVQTARE----LFKAAVRVDPKSET 479
Query: 291 RRIFKKYIEMELCLGNID 308
+ +I ME LG I+
Sbjct: 480 --TWASWIAMESELGEIE 495
>sp|A7MB10|RRP5_BOVIN Protein RRP5 homolog OS=Bos taurus GN=PDCD11 PE=2 SV=1
Length = 1874
Score = 58.2 bits (139), Expect = 9e-08, Method: Composition-based stats.
Identities = 57/248 (22%), Positives = 104/248 (41%), Gaps = 28/248 (11%)
Query: 26 YIRMEENLGNVAGARQIFERWMHWMPDHEG------WLSYIKFKLRYNEVQRARHIFERL 79
Y+ + AR + ER + + E W++ + + Y + +FER
Sbjct: 1628 YMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQESLTKVFERA 1687
Query: 80 VQCHPYN--LSAWINFADFEMKMGEVDRARNVYECAVEIFLADDHDEAEQLFVAFAKFEE 137
VQ YN L +++ AD K + A +Y ++ F + + ++V + F
Sbjct: 1688 VQ---YNEPLKVFLHLADIYTKSEKFQEAGELYNRMLKRF-----RQEKAVWVKYGAFLL 1739
Query: 138 MGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYGDREGIEDAIAGKMRLQYE 197
+ + R + + AL+ +PK D+ KF E Q GD E + R +E
Sbjct: 1740 RRGKAEASHR---VMQRALECLPKKEHVDVIAKFAQLEFQLGDAE--------RARAIFE 1788
Query: 198 DGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAI-ANVPPAEEKRYWQRYIYLWINY 256
+ P D W YI + + G+Q+ R ++ER I ++ P K +++RY+ +
Sbjct: 1789 STLSIYPKRTDVWSVYIDMIIKHGSQKEARAIFERVIHLSLAPKRMKFFFKRYLDYEKQH 1848
Query: 257 ALYKEVDA 264
K+V A
Sbjct: 1849 GSEKDVQA 1856
Score = 52.4 bits (124), Expect = 5e-06, Method: Composition-based stats.
Identities = 51/208 (24%), Positives = 86/208 (41%), Gaps = 34/208 (16%)
Query: 170 KFLAFEKQYGDREGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREV 229
+++AF Q + IE A A R R+ + W + LE G+QE + +V
Sbjct: 1627 QYMAFHLQATE---IEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQESLTKV 1683
Query: 230 YERAI------------ANVPPAEEK---------RYWQRYIY---LWINYALYKEVDAG 265
+ERA+ A++ EK R +R+ +W+ Y + + G
Sbjct: 1684 FERAVQYNEPLKVFLHLADIYTKSEKFQEAGELYNRMLKRFRQEKAVWVKYGAFL-LRRG 1742
Query: 266 DLERT-RDVYRTLFIFYFSFSPRMEERRIFKKYIEMELCLGNIDPCRKLYEKYLEWSPEN 324
E + R + R L P+ E + K+ ++E LG+ + R ++E L P+
Sbjct: 1743 KAEASHRVMQRALECL-----PKKEHVDVIAKFAQLEFQLGDAERARAIFESTLSIYPKR 1797
Query: 325 CYAWSKYTELEKSLDETERARAIFELAI 352
WS Y ++ + ARAIFE I
Sbjct: 1798 TDVWSVYIDMIIKHGSQKEARAIFERVI 1825
Score = 42.7 bits (99), Expect = 0.004, Method: Composition-based stats.
Identities = 51/258 (19%), Positives = 107/258 (41%), Gaps = 31/258 (12%)
Query: 93 FADFEMKMGEVDRARNVYECAVEIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIY 152
+ F ++ E+++AR V E A++ + E ++VA E M + + + ++
Sbjct: 1628 YMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQESLTK---VF 1684
Query: 153 KFALDRIPKGRAEDLYRKFLAFEKQYGDREGIEDAIAGKMRLQYEDGVRKNPMNYDTWFD 212
+ A+ + + + FL Y E ++ AG++ Y +++ W
Sbjct: 1685 ERAV------QYNEPLKVFLHLADIYTKSEKFQE--AGEL---YNRMLKRFRQEKAVWVK 1733
Query: 213 YIRLEERVGNQERVREVYERAIANVPPAEEKRYWQRYIYLWINYALYKEVDAGDLERTRD 272
Y R G E V +RA+ +P E ++ L E GD ER R
Sbjct: 1734 YGAFLLRRGKAEASHRVMQRALECLPKKEHVDVIAKFAQL--------EFQLGDAERARA 1785
Query: 273 VYRTLFIFYFSFSPRMEERRIFKKYIEMELCLGNIDPCRKLYEK--YLEWSPENC-YAWS 329
++ + Y P+ + ++ YI+M + G+ R ++E+ +L +P+ + +
Sbjct: 1786 IFESTLSIY----PKRTD--VWSVYIDMIIKHGSQKEARAIFERVIHLSLAPKRMKFFFK 1839
Query: 330 KYTELEKSLDETERARAI 347
+Y + EK + +A+
Sbjct: 1840 RYLDYEKQHGSEKDVQAV 1857
Score = 41.2 bits (95), Expect = 0.012, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 49/114 (42%), Gaps = 3/114 (2%)
Query: 9 WDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEGWLSYIKF---KLR 65
++R++ + +W Y G + ++ +R + +P E KF + +
Sbjct: 1717 YNRMLKRFRQEKAVWVKYGAFLLRRGKAEASHRVMQRALECLPKKEHVDVIAKFAQLEFQ 1776
Query: 66 YNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLA 119
+ +RAR IFE + +P W + D +K G AR ++E + + LA
Sbjct: 1777 LGDAERARAIFESTLSIYPKRTDVWSVYIDMIIKHGSQKEARAIFERVIHLSLA 1830
>sp|Q12381|PRP1_SCHPO Pre-mRNA-splicing factor prp1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=prp1 PE=1 SV=1
Length = 906
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 103/244 (42%), Gaps = 23/244 (9%)
Query: 10 DRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEG-WLSYIKFKLRYNE 68
++ V P+ + LW Y + +N+ ++AGAR I R + + E WL+ ++ + NE
Sbjct: 568 EKAVESCPKAEILWLLYAKERKNVNDIAGARNILGRAFEYNSNSEEIWLAAVRIEFVNNE 627
Query: 69 VQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLADDHDEAEQL 128
+RAR + R + W E + E DRA + E A++I+ D +L
Sbjct: 628 NERARKLLAR-ARIESGTERIWTKSISLERILDEKDRALQLLENALKIYPHYD-----KL 681
Query: 129 FVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYGDREGIEDAI 188
++ + E + ++ + AR Y P L L EKQ R
Sbjct: 682 YMMKGQIFE---DKEQIELARDAYLAGTKVCPYSIPLWLLLAKLE-EKQSVIR------- 730
Query: 189 AGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIANVPPAEEKRYWQR 248
R+ ++ KNP N W + I++E R GN +VR +A+ P + W
Sbjct: 731 ---ARVVFDRAKVKNPKNEFLWLELIKMELRAGNISQVRAALAKALQECPSS--GLLWTE 785
Query: 249 YIYL 252
I+L
Sbjct: 786 AIWL 789
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 136/352 (38%), Gaps = 39/352 (11%)
Query: 4 HGRNAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMP-DHEGWLSYIKF 62
H + + + +P LW + +EE + N AR + R + +P + WL+ +
Sbjct: 357 HKKRIIKKALEFNPTSVSLWKEAVNLEEEVDN---ARILLARAVELIPMSIDLWLALARL 413
Query: 63 KLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAV-EIFLADD 121
+ N A+ + + Q + WI A E + G V R + V E+
Sbjct: 414 ETYEN----AKKVLNKARQTIRTSHEVWIAAARLEEQQGNVSRVEKIMARGVSELQATGG 469
Query: 122 HDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYGDR 181
+ +Q K E G LD ED + +L + + R
Sbjct: 470 MLQRDQWLSEAEKCETEGAVITAQAIINTCLGVGLDE------EDQFDTWLDDAQSFIAR 523
Query: 182 EGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIANVPPAE 241
+ I+ A R + +R P + W + LE+ G E V + E+A+ + P AE
Sbjct: 524 KCIDCA-----RAVFAFSLRVYPKSEKLWLRAVELEKLYGTTESVCSILEKAVESCPKAE 578
Query: 242 EKRYWQRYIYLWINYALYKEVDAGDLERTRDVYRTLFIFYFSFSPRMEERRIFKKYIEME 301
LW+ YA ++ + D+ R++ F ++ EE I+ + +E
Sbjct: 579 ---------ILWLLYAKERK-NVNDIAGARNILGR----AFEYNSNSEE--IWLAAVRIE 622
Query: 302 LCLGNIDPCRKLYEKY-LEWSPENCYAWSKYTELEKSLDETERARAIFELAI 352
+ RKL + +E E W+K LE+ LDE +RA + E A+
Sbjct: 623 FVNNENERARKLLARARIESGTERI--WTKSISLERILDEKDRALQLLENAL 672
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 124/345 (35%), Gaps = 73/345 (21%)
Query: 2 IDHGRNAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHE-GWLSYI 60
ID R + + + P+ ++LW + +E+ G I E+ + P E WL Y
Sbjct: 526 IDCARAVFAFSLRVYPKSEKLWLRAVELEKLYGTTESVCSILEKAVESCPKAEILWLLYA 585
Query: 61 KFKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLAD 120
K + N++ AR+I R + + + W+ E E +RAR + + A
Sbjct: 586 KERKNVNDIAGARNILGRAFEYNSNSEEIWLAAVRIEFVNNENERARKL------LARAR 639
Query: 121 DHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQ-YG 179
E+++ E + E DRA + + AL P Y K + Q +
Sbjct: 640 IESGTERIWTKSISLERI---LDEKDRALQLLENALKIYPH------YDKLYMMKGQIFE 690
Query: 180 DREGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIANVPP 239
D+E IE A R Y G + P + W +LEE+ + R R V++RA P
Sbjct: 691 DKEQIELA-----RDAYLAGTKVCPYSIPLWLLLAKLEEK-QSVIRARVVFDRAKVKNPK 744
Query: 240 AEEKRYWQRYIYLWINYALYKEVDAGDLERTRDVYRTLFIFYFSFSPRMEERRIFKKYIE 299
E +LW+ + I+
Sbjct: 745 NE---------FLWL-----------------------------------------ELIK 754
Query: 300 MELCLGNIDPCRKLYEKYLEWSPENCYAWSKYTELEKSLDETERA 344
MEL GNI R K L+ P + W++ LE RA
Sbjct: 755 MELRAGNISQVRAALAKALQECPSSGLLWTEAIWLEPRAQRKTRA 799
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 75/378 (19%), Positives = 136/378 (35%), Gaps = 67/378 (17%)
Query: 2 IDHGRNAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEG-WLSYI 60
I R V+ +P+ W R+EE ++ A+ + + E WL I
Sbjct: 260 IRKARKLLQSVIETNPKHASGWVAAARLEEVANKLSQAQSLILKGCENCSRSEDVWLEAI 319
Query: 61 KFKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLAD 120
R + A+ I V+ P +++ W+ E + + + + A+E
Sbjct: 320 ----RLHPAAEAKVIIANAVKKLPKSVTLWLEAEKLE---NQAQHKKRIIKKALEF---- 368
Query: 121 DHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYGD 180
+ + L+ EE E D AR + A++ IP + DL+ E Y +
Sbjct: 369 -NPTSVSLWKEAVNLEE------EVDNARILLARAVELIP--MSIDLWLALARLE-TYEN 418
Query: 181 REGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIANVPPA 240
+ + + +R +E W RLEE+ GN RV ++ R ++ +
Sbjct: 419 AKKVLNKARQTIRTSHE-----------VWIAAARLEEQQGNVSRVEKIMARGVSELQAT 467
Query: 241 EEKRYWQRYIYLW-----------------INYALYKEVDAGD-------------LERT 270
QR +L IN L +D D +
Sbjct: 468 --GGMLQRDQWLSEAEKCETEGAVITAQAIINTCLGVGLDEEDQFDTWLDDAQSFIARKC 525
Query: 271 RDVYRTLFIFYFSFSPRMEERRIFKKYIEMELCLGNIDPCRKLYEKYLEWSPENCYAWSK 330
D R +F F P+ E +++ + +E+E G + + EK +E P+ W
Sbjct: 526 IDCARAVFAFSLRVYPKSE--KLWLRAVELEKLYGTTESVCSILEKAVESCPKAEILWLL 583
Query: 331 YTELEKSLDETERARAIF 348
Y + K++++ AR I
Sbjct: 584 YAKERKNVNDIAGARNIL 601
Score = 36.2 bits (82), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 48/261 (18%), Positives = 107/261 (40%), Gaps = 45/261 (17%)
Query: 52 DHEGWLSYIKFKLRYN-----EVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRA 106
D +G+L+ + + N ++++AR + + +++ +P + S W+ A E ++ +A
Sbjct: 238 DPKGYLTSLNSMVPKNANDLGDIRKARKLLQSVIETNPKHASGWVAAARLEEVANKLSQA 297
Query: 107 RNVYECAVEIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAED 166
+++ E + +E +++ + A+ I A+ ++PK
Sbjct: 298 QSLILKGCE-----NCSRSEDVWLEAIRLHPAA-------EAKVIIANAVKKLPKSVT-- 343
Query: 167 LYRKFLAFEKQYGDREGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERV 226
+ + E +E+ K R+ + + NP + W + + LEE V N
Sbjct: 344 ----------LWLEAEKLENQAQHKKRI-IKKALEFNPTSVSLWKEAVNLEEEVDN---A 389
Query: 227 REVYERAIANVPPAEEKRYWQRYIYLWINYALYKEVDAGD--LERTRDVYRTLFIFYFSF 284
R + RA+ +P + I LW+ A + + L + R RT + +
Sbjct: 390 RILLARAVELIPMS---------IDLWLALARLETYENAKKVLNKARQTIRTSHEVWIA- 439
Query: 285 SPRMEERRIFKKYIEMELCLG 305
+ R+EE++ +E + G
Sbjct: 440 AARLEEQQGNVSRVEKIMARG 460
>sp|A1A5S1|PRP6_RAT Pre-mRNA-processing factor 6 OS=Rattus norvegicus GN=Prpf6 PE=2
SV=1
Length = 941
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 99/243 (40%), Gaps = 22/243 (9%)
Query: 11 RVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEG-WLSYIKFKLRYNEV 69
R V P+ + LW + + G+V AR I P+ E WL+ +K + NE
Sbjct: 599 RAVAHCPKAEVLWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEY 658
Query: 70 QRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLADDHDEAEQLF 129
+RAR + + P ++ E +G + A+ + E A+ + ++ +L+
Sbjct: 659 ERARRLLAKARSSAP-TARVFMKSVKLEWVLGNITAAQELCEEALRHY-----EDFPKLW 712
Query: 130 VAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYGDREGIEDAIA 189
+ + EE G + +RAR Y L + P + L+ E++ G AI
Sbjct: 713 MMKGQIEEQG---ELMERAREAYNQGLKKCP--HSTPLWLLLSRLEEKIGQLTRAR-AIL 766
Query: 190 GKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIANVPPAEEKRYWQRY 249
K RL KNP N W + +RLE R G + + +A+ P W
Sbjct: 767 EKSRL-------KNPKNPGLWLESVRLEYRAGLKNIANTLMAKALQECP--NSGILWSEA 817
Query: 250 IYL 252
++L
Sbjct: 818 VFL 820
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 82/398 (20%), Positives = 146/398 (36%), Gaps = 86/398 (21%)
Query: 26 YIRMEENLGNVAGARQIFERWMHWMPDHEGWLSYIKFKLRYNEVQRARHIFERLVQCHPY 85
YIR E ++ +++ + + +P+ + K + E + AR + R V+C P
Sbjct: 376 YIRAAELETDIRAKKRVLRKALEHVPNS---VRLWKAAVELEEPEDARIMLSRAVECCPT 432
Query: 86 NLSAWINFADFEMKMGEVDRARNVYECAVEIFLADDHDEAEQLFVAFAKFEEMGCNCKET 145
++ W+ A E + AR V A E D H +++ AK EE N +
Sbjct: 433 SVELWLALARLET----YENARKVLNKARENIPTDRH-----IWITAAKLEEANGNTQMV 483
Query: 146 DRA--RCIYKFALDRIPKGR------------------AEDLYRKFLAFEKQYGDREG-- 183
++ R I + + R + + R + + DR+
Sbjct: 484 EKIIDRAITSLRANGVEINREQWIQDAEECDRAGSVATCQAVMRAVIGIGIEEEDRKHTW 543
Query: 184 IEDA---IAGKM----RLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIAN 236
+EDA +A R Y ++ P W E+ G +E + + +RA+A+
Sbjct: 544 MEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAH 603
Query: 237 VPPAEEKRYWQRYIYLWINYALYKEVDAGDLERTRDVYRTLFIFYFSFSPRMEE------ 290
P AE LW+ A K + AGD+ R++ F +P EE
Sbjct: 604 CPKAE---------VLWLMGAKSKWL-AGDV----PAARSILALAFQANPNSEEIWLAAV 649
Query: 291 -------------------------RRIFKKYIEMELCLGNIDPCRKLYEKYLEWSPENC 325
R+F K +++E LGNI ++L E+ L +
Sbjct: 650 KLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNITAAQELCEEALRHYEDFP 709
Query: 326 YAWSKYTELEKSLDETERARAIFELAIAQPILDLPEFL 363
W ++E+ + ERAR + + + P +L
Sbjct: 710 KLWMMKGQIEEQGELMERAREAYNQGLKKCPHSTPLWL 747
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 83/222 (37%), Gaps = 28/222 (12%)
Query: 17 PRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEG-WLSYIKFKLRYNEVQRARHI 75
P +W E+N G + +R + P E WL K K +V AR I
Sbjct: 571 PSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSKWLAGDVPAARSI 630
Query: 76 FERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLADDHDEAEQLFVAFAKF 135
Q +P + W+ E + E +RAR + + A ++F+ K
Sbjct: 631 LALAFQANPNSEEIWLAAVKLESENNEYERARRL------LAKARSSAPTARVFMKSVKL 684
Query: 136 EEMGCNCKETDRARCIYKFALDRIPKGR--AEDLYRKFLAFEKQYGDREGIEDA--IAGK 191
E + L I + E+ R + F K + + IE+ + +
Sbjct: 685 E-----------------WVLGNITAAQELCEEALRHYEDFPKLWMMKGQIEEQGELMER 727
Query: 192 MRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERA 233
R Y G++K P + W RLEE++G R R + E++
Sbjct: 728 AREAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAILEKS 769
Score = 36.2 bits (82), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 65/328 (19%), Positives = 127/328 (38%), Gaps = 53/328 (16%)
Query: 67 NEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLADD----- 121
N++++AR + + + + +P++ AWI A E G++ ARN+ E+ +
Sbjct: 289 NDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLE 348
Query: 122 ------HDEAEQLFVAFAKFEEMGCNC------KETD-RARC-IYKFALDRIPKGRAEDL 167
D A+ + + ETD RA+ + + AL+ +P + L
Sbjct: 349 AARLQPGDTAKAVVAQAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPN--SVRL 406
Query: 168 YRKFLAFEKQYGDREGIEDAIA----------GKMRLQYEDGVRKN--------PMNYDT 209
++ + E+ R + A+ RL+ + RK P +
Sbjct: 407 WKAAVELEEPEDARIMLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRHI 466
Query: 210 WFDYIRLEERVGNQERVREVYERAIANVPPAEEKRYWQRYIYLWINYALYKEVDAGDLER 269
W +LEE GN + V ++ +RAI ++ R + IN + + DA + +R
Sbjct: 467 WITAAKLEEANGNTQMVEKIIDRAITSL----------RANGVEINREQWIQ-DAEECDR 515
Query: 270 TRDVYRTLFIFYFSFSPRMEERRIFKKYIE-MELCLGN--IDPCRKLYEKYLEWSPENCY 326
V + +EE ++E + C+ + ++ R +Y L+ P
Sbjct: 516 AGSVATCQAVMRAVIGIGIEEEDRKHTWMEDADSCVAHNALECARAIYAYALQVFPSKKS 575
Query: 327 AWSKYTELEKSLDETERARAIFELAIAQ 354
W + EK+ E A+ + A+A
Sbjct: 576 VWLRAAYFEKNHGTRESLEALLQRAVAH 603
Score = 35.4 bits (80), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Query: 1 FIDHGRNAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEG-WLSY 59
++ R A+++ + P LW R+EE +G + AR I E+ P + G WL
Sbjct: 724 LMERAREAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAILEKSRLKNPKNPGLWLES 783
Query: 60 IKFKLRYNEVQRARHIFERLVQCHPYNLSAW 90
++ + R A + + +Q P + W
Sbjct: 784 VRLEYRAGLKNIANTLMAKALQECPNSGILW 814
>sp|Q91YR7|PRP6_MOUSE Pre-mRNA-processing factor 6 OS=Mus musculus GN=Prpf6 PE=2 SV=1
Length = 941
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 99/243 (40%), Gaps = 22/243 (9%)
Query: 11 RVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEG-WLSYIKFKLRYNEV 69
R V P+ + LW + + G+V AR I P+ E WL+ +K + NE
Sbjct: 599 RAVAHCPKAEVLWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEY 658
Query: 70 QRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLADDHDEAEQLF 129
+RAR + + P ++ E +G + A+ + E A+ + ++ +L+
Sbjct: 659 ERARRLLAKARSSAP-TARVFMKSVKLEWVLGNISAAQELCEEALRHY-----EDFPKLW 712
Query: 130 VAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYGDREGIEDAIA 189
+ + EE G + ++AR Y L + P + L+ E++ G AI
Sbjct: 713 MMKGQIEEQG---ELMEKAREAYNQGLKKCP--HSTPLWLLLSRLEEKIGQLTRAR-AIL 766
Query: 190 GKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIANVPPAEEKRYWQRY 249
K RL KNP N W + +RLE R G + + +A+ P W
Sbjct: 767 EKSRL-------KNPKNPGLWLESVRLEYRAGLKNIANTLMAKALQECP--NSGILWSEA 817
Query: 250 IYL 252
++L
Sbjct: 818 VFL 820
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 81/398 (20%), Positives = 146/398 (36%), Gaps = 86/398 (21%)
Query: 26 YIRMEENLGNVAGARQIFERWMHWMPDHEGWLSYIKFKLRYNEVQRARHIFERLVQCHPY 85
YIR E ++ +++ + + +P+ + K + E + AR + R V+C P
Sbjct: 376 YIRAAELETDIRAKKRVLRKALEHVPNS---VRLWKAAVELEEPEDARIMLSRAVECCPT 432
Query: 86 NLSAWINFADFEMKMGEVDRARNVYECAVEIFLADDHDEAEQLFVAFAKFEEMGCNCKET 145
++ W+ A E + AR V A E D H +++ AK EE N +
Sbjct: 433 SVELWLALARLET----YENARKVLNKARENIPTDRH-----IWITAAKLEEANGNTQMV 483
Query: 146 DRA--RCIYKFALDRIPKGR------------------AEDLYRKFLAFEKQYGDREG-- 183
++ R I + + R + + R + + DR+
Sbjct: 484 EKIIDRAITSLRANGVEINREQWIQDAEECDRAGSVATCQAVMRAVIGIGIEEEDRKHTW 543
Query: 184 IEDA---IAGKM----RLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIAN 236
+EDA +A R Y ++ P W E+ G +E + + +RA+A+
Sbjct: 544 MEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAH 603
Query: 237 VPPAEEKRYWQRYIYLWINYALYKEVDAGDLERTRDVYRTLFIFYFSFSPRMEE------ 290
P AE LW+ A K + AGD+ R++ F +P EE
Sbjct: 604 CPKAE---------VLWLMGAKSKWL-AGDV----PAARSILALAFQANPNSEEIWLAAV 649
Query: 291 -------------------------RRIFKKYIEMELCLGNIDPCRKLYEKYLEWSPENC 325
R+F K +++E LGNI ++L E+ L +
Sbjct: 650 KLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNISAAQELCEEALRHYEDFP 709
Query: 326 YAWSKYTELEKSLDETERARAIFELAIAQPILDLPEFL 363
W ++E+ + E+AR + + + P +L
Sbjct: 710 KLWMMKGQIEEQGELMEKAREAYNQGLKKCPHSTPLWL 747
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 81/220 (36%), Gaps = 24/220 (10%)
Query: 17 PRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEG-WLSYIKFKLRYNEVQRARHI 75
P +W E+N G + +R + P E WL K K +V AR I
Sbjct: 571 PSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSKWLAGDVPAARSI 630
Query: 76 FERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLADDHDEAEQLFVAFAKF 135
Q +P + W+ E + E +RAR + + A ++F+ K
Sbjct: 631 LALAFQANPNSEEIWLAAVKLESENNEYERARRL------LAKARSSAPTARVFMKSVKL 684
Query: 136 EEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYGDREGIEDA--IAGKMR 193
E + N E+ R + F K + + IE+ + K R
Sbjct: 685 EWVLGNISAAQEL---------------CEEALRHYEDFPKLWMMKGQIEEQGELMEKAR 729
Query: 194 LQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERA 233
Y G++K P + W RLEE++G R R + E++
Sbjct: 730 EAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAILEKS 769
Score = 36.2 bits (82), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 67/334 (20%), Positives = 132/334 (39%), Gaps = 65/334 (19%)
Query: 67 NEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLADDHDEAE 126
N++++AR + + + + +P++ AWI A E G++ ARN+ E+ ++E
Sbjct: 289 NDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMC-----PKSE 343
Query: 127 QLFVAFAKFEEMGCNCK-----------------------ETD-RARC-IYKFALDRIPK 161
+++ A+ + G K ETD RA+ + + AL+ +P
Sbjct: 344 DVWLEAARLQP-GDTAKAVVAQAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPN 402
Query: 162 GRAEDLYRKFLAFEKQYGDREGIEDAIA----------GKMRLQYEDGVRKN-------- 203
+ L++ + E+ R + A+ RL+ + RK
Sbjct: 403 --SVRLWKAAVELEEPEDARIMLSRAVECCPTSVELWLALARLETYENARKVLNKARENI 460
Query: 204 PMNYDTWFDYIRLEERVGNQERVREVYERAIANVPPAEEKRYWQRYIYLWINYALYKEVD 263
P + W +LEE GN + V ++ +RAI ++ R + IN + + D
Sbjct: 461 PTDRHIWITAAKLEEANGNTQMVEKIIDRAITSL----------RANGVEINREQWIQ-D 509
Query: 264 AGDLERTRDVYRTLFIFYFSFSPRMEERRIFKKYIE-MELCLGN--IDPCRKLYEKYLEW 320
A + +R V + +EE ++E + C+ + ++ R +Y L+
Sbjct: 510 AEECDRAGSVATCQAVMRAVIGIGIEEEDRKHTWMEDADSCVAHNALECARAIYAYALQV 569
Query: 321 SPENCYAWSKYTELEKSLDETERARAIFELAIAQ 354
P W + EK+ E A+ + A+A
Sbjct: 570 FPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAH 603
Score = 35.4 bits (80), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Query: 1 FIDHGRNAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEG-WLSY 59
++ R A+++ + P LW R+EE +G + AR I E+ P + G WL
Sbjct: 724 LMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAILEKSRLKNPKNPGLWLES 783
Query: 60 IKFKLRYNEVQRARHIFERLVQCHPYNLSAW 90
++ + R A + + +Q P + W
Sbjct: 784 VRLEYRAGLKNIANTLMAKALQECPNSGILW 814
>sp|O74835|RRP5_SCHPO rRNA biogenesis protein rrp5 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rrp5 PE=1 SV=1
Length = 1690
Score = 52.0 bits (123), Expect = 6e-06, Method: Composition-based stats.
Identities = 45/210 (21%), Positives = 88/210 (41%), Gaps = 38/210 (18%)
Query: 56 WLSYIKFKLRYNEVQRARHIFERLVQCHPY-----NLSAWINFADFEMKMGEVDRARNVY 110
W+SY+ + L NE+Q AR + +R + Y L+ W+ + E+ G D + V+
Sbjct: 1443 WISYMAYHLNLNELQEAREVGKRALSTINYREEDEKLNVWMALLNLEVAYGTEDSLKEVF 1502
Query: 111 E--CAV------------------EIFLADDHDEA-----EQLFVAFAKFEEMGCNCKET 145
+ CA ++ LAD++ + +Q+ + ++ N +
Sbjct: 1503 KEACAYCDALIVYEKLCGILIKGGKVDLADEYMQLMLKNFKQVPSVWIQYATFLLNNDKA 1562
Query: 146 DRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYGDREGIEDAIAGKMRLQYEDGVRKNPM 205
++A + + +L +PK + KF E + GD E + R +E + P
Sbjct: 1563 EKAHGLLERSLQSLPKSEHVGIIEKFAILEFKNGDPE--------RGRTIFEGLLSSYPK 1614
Query: 206 NYDTWFDYIRLEERVGNQERVREVYERAIA 235
D W I +E + + VR +++R +A
Sbjct: 1615 RLDLWNVLIDMEMKQDDPSIVRRLFQRLLA 1644
Score = 38.5 bits (88), Expect = 0.073, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 3/97 (3%)
Query: 18 RVDQLWNNYIRMEENLGNVAGARQIFERWMHWMP--DHEGWLS-YIKFKLRYNEVQRARH 74
+V +W Y N A + ER + +P +H G + + + + + +R R
Sbjct: 1544 QVPSVWIQYATFLLNNDKAEKAHGLLERSLQSLPKSEHVGIIEKFAILEFKNGDPERGRT 1603
Query: 75 IFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYE 111
IFE L+ +P L W D EMK + R +++
Sbjct: 1604 IFEGLLSSYPKRLDLWNVLIDMEMKQDDPSIVRRLFQ 1640
Score = 38.5 bits (88), Expect = 0.078, Method: Composition-based stats.
Identities = 54/257 (21%), Positives = 104/257 (40%), Gaps = 38/257 (14%)
Query: 67 NEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLADDHDEAE 126
+E+ FER + P + WI++ + + + E+ AR V + A+ + DE
Sbjct: 1420 DEIPSTAADFERQLLSSPNSSLLWISYMAYHLNLNELQEAREVGKRALSTINYREEDEKL 1479
Query: 127 QLFVAFAKFE-EMGC--NCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYG--DR 181
+++A E G + KE + C Y AL + +EK G +
Sbjct: 1480 NVWMALLNLEVAYGTEDSLKEVFKEACAYCDAL---------------IVYEKLCGILIK 1524
Query: 182 EGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIANVPPAE 241
G D M+L ++ ++ P W Y E+ + ER++ ++P +E
Sbjct: 1525 GGKVDLADEYMQLMLKN-FKQVP---SVWIQYATFLLNNDKAEKAHGLLERSLQSLPKSE 1580
Query: 242 EKRYWQRYIYLWINYALYKEVDAGDLERTRDVYRTLFIFYFSFSPRMEERRIFKKYIEME 301
+++ L E GD ER R ++ L S+ R++ ++ I+ME
Sbjct: 1581 HVGIIEKFAIL--------EFKNGDPERGRTIFEGLLS---SYPKRLD---LWNVLIDME 1626
Query: 302 LCLGNIDPCRKLYEKYL 318
+ + R+L+++ L
Sbjct: 1627 MKQDDPSIVRRLFQRLL 1643
>sp|Q9P7R9|SYF1_SCHPO Pre-mRNA-splicing factor cwf3 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cwf3 PE=1 SV=1
Length = 790
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 111/239 (46%), Gaps = 25/239 (10%)
Query: 2 IDHGRNAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWM---HWMPDHEGWLS 58
I+ R +DRV L Q+ NY + E + +I+ER + + E W
Sbjct: 496 IETTRKLYDRVFELKIATPQVVVNYANLLEENAYFEDSFKIYERGVALFSYPVAFELWNL 555
Query: 59 YI-KFKLRY--NEVQRARHIFERLVQ-CHP-YNLSAWINFADFEMKMGEVDRARNVYECA 113
Y+ KF RY ++R R +FE+ ++ C P ++ S ++ +ADFE K G+ R+ ++ E A
Sbjct: 556 YLTKFVKRYQGTHMERTRDLFEQALEGCPPEFSKSIYLLYADFEEKFGKAKRSISILEKA 615
Query: 114 VEIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLA 173
AD A++L + ++ N R +Y+ A++ + +D+ +F
Sbjct: 616 -----ADKVKTADRLAIYNVLLVKVALNYG-VLATRTVYEKAIESLSDSEVKDMCLRFAE 669
Query: 174 FEKQYGDREGIEDAIAGKMRLQYEDGVRK-NP-MNYDTWFDYIRLEERVGN-QERVREV 229
E + G+ + + RL Y G + +P + D W + E R GN +E V+E+
Sbjct: 670 METKLGEID--------RARLIYIHGSQYCDPRVETDYWKAWQEFEIRYGNPEETVKEM 720
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 137/338 (40%), Gaps = 61/338 (18%)
Query: 10 DRVVTLSPRV-----DQLWNNYIRMEENLGNVAGARQIFERWMHWMPDH------EGWLS 58
D + ++P++ +L++ + R EN ++ +R IFE+ H +P + W+
Sbjct: 375 DAIKNVNPKLAHGSLGKLFSEFARFYENFDDLEQSRIIFEKATH-VPYKTVNELAQVWID 433
Query: 59 YIKFKLRYNEVQRARHIF----------------ERL---VQCHPYNLSAWINFADFEMK 99
+ + +LR+ AR + E L V+ H + W+ + D E
Sbjct: 434 WAEMELRHQNFDAARKLIGDAVHAPRKSHISFFDESLSPQVRLHKSS-KIWMYYLDLEES 492
Query: 100 MGEVDRARNVYECAVEIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRI 159
+G ++ R +Y+ E+ +A Q+ V +A E +++ + IY+ +
Sbjct: 493 VGTIETTRKLYDRVFELKIA-----TPQVVVNYANLLEENAYFEDSFK---IYERGVALF 544
Query: 160 PKGRAEDLYRKFLA-FEKQYGDREGIEDAIAGKMRLQYEDGVRKNPMNY--DTWFDYIRL 216
A +L+ +L F K+Y + + R +E + P + + Y
Sbjct: 545 SYPVAFELWNLYLTKFVKRY------QGTHMERTRDLFEQALEGCPPEFSKSIYLLYADF 598
Query: 217 EERVGNQERVREVYERAIANVPPAEEKRYWQRYIYLWINYALYKEVDAGDLERTRDVYRT 276
EE+ G +R + E+A V A+ Y L + AL V A TR VY
Sbjct: 599 EEKFGKAKRSISILEKAADKVKTADR---LAIYNVLLVKVALNYGVLA-----TRTVYEK 650
Query: 277 LFIFYFSFSPRMEERRIFKKYIEMELCLGNIDPCRKLY 314
I S S E + + ++ EME LG ID R +Y
Sbjct: 651 A-IESLSDS---EVKDMCLRFAEMETKLGEIDRARLIY 684
>sp|Q52DF3|SYF1_MAGO7 Pre-mRNA-splicing factor SYF1 OS=Magnaporthe oryzae (strain 70-15 /
ATCC MYA-4617 / FGSC 8958) GN=SYF1 PE=3 SV=2
Length = 832
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 143/322 (44%), Gaps = 51/322 (15%)
Query: 51 PDHEGWLSYIKFKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVY 110
P H+ W +Y KF R +++ AR I E+ V+ P+ + + AD ++ E++ + +
Sbjct: 407 PFHQLWANYAKFYERGGDLRSARIIMEKAVKV-PFK--SVVELADMWIEWAEMELRNDNF 463
Query: 111 ECAVEIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPK-GRAEDLYR 169
E AV I +A ++ V + F+E + ++ ++ F +D + G ED +
Sbjct: 464 EEAVRI-MAKAVQAPKRSTVDY--FDETLTPQQRVHKSWKLWSFYVDLVESVGTLEDTKK 520
Query: 170 KFLAFEKQYGDREGIEDAIAGKMRLQ------------YEDGVR--KNPMNYDTWFDYI- 214
+E+ + R + L YE G+ P+ ++ W Y+
Sbjct: 521 ---VYERIFELRIATPQTVVNYANLLEEHKYYEESFKIYERGLDLFSYPVAFELWNMYLT 577
Query: 215 RLEERVGNQERVREVYERAIANVPPAEEKRYWQRYIYLWINYALYKEVDAGDLERTRDVY 274
+ +R + ER+R+++E+A+ PP K I Y +Y G+LE R +
Sbjct: 578 KAVDRKISIERLRDLFEQAVEGCPPKFAK----------IIYLMY-----GNLEEERGLA 622
Query: 275 R-TLFIFYFSFSPRMEERR--IFKKYIEMELCLGNIDPCRKLYEKYLEWSPEN-----CY 326
R + I+ + +E R +F YI + R++YE+ + P++ C
Sbjct: 623 RHAMRIYERATRAVSDEDRADMFNFYITKSASNFGLPSTRQIYERAIAALPDDEARDMCL 682
Query: 327 AWSKYTELEKSLDETERARAIF 348
K+ ++EK L E +RARAI+
Sbjct: 683 ---KFADMEKRLGEIDRARAIY 701
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 130/342 (38%), Gaps = 54/342 (15%)
Query: 21 QLWNNYIRMEENLGNVAGARQIFER-----WMHWMPDHEGWLSYIKFKLRYNEVQRARHI 75
QLW NY + E G++ AR I E+ + + + W+ + + +LR + + A I
Sbjct: 410 QLWANYAKFYERGGDLRSARIIMEKAVKVPFKSVVELADMWIEWAEMELRNDNFEEAVRI 469
Query: 76 FERLVQCHPYNL------------------SAWINFADFEMKMGEVDRARNVYECAVEIF 117
+ VQ + W + D +G ++ + VYE E+
Sbjct: 470 MAKAVQAPKRSTVDYFDETLTPQQRVHKSWKLWSFYVDLVESVGTLEDTKKVYERIFELR 529
Query: 118 LADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQ 177
+A Q V +A E +E+ + IY+ LD A +L+ +L K
Sbjct: 530 IA-----TPQTVVNYANLLEEHKYYEESFK---IYERGLDLFSYPVAFELWNMYLT--KA 579
Query: 178 YGDREGIEDAIAGKMRLQYEDGVRKNPMNYD--TWFDYIRLEERVGNQERVREVYERAIA 235
+ IE ++R +E V P + + Y LEE G +YERA
Sbjct: 580 VDRKISIE-----RLRDLFEQAVEGCPPKFAKIIYLMYGNLEEERGLARHAMRIYERATR 634
Query: 236 NVPPAEEKRYWQRYIYLWINYALYKEVDAGDLERTRDVYRTLFIFYFSFSPRMEERRIFK 295
V + + N+ + K L TR +Y + P E R +
Sbjct: 635 AVSDEDRADMF--------NFYITKSASNFGLPSTRQIYERA----IAALPDDEARDMCL 682
Query: 296 KYIEMELCLGNIDPCRKLYEKYLEW-SPENCYA-WSKYTELE 335
K+ +ME LG ID R +Y ++ P A W+K+ + E
Sbjct: 683 KFADMEKRLGEIDRARAIYGHASQFCDPRTTPAFWTKWEQFE 724
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 117/298 (39%), Gaps = 65/298 (21%)
Query: 90 WINFADFEMKMGEVDRARNVYECAVEIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRAR 149
W+ A + ++ G +RAR+V+E + + + +F ++A+FEE
Sbjct: 269 WVGLATYWIRRGSFERARDVFEEGITTVMT--VRDFTLVFDSYAEFEESVIG-------- 318
Query: 150 CIYKFALDRIPKGRAE-----DLYRKFLAFEKQYGDREGIEDAIAGKMRLQYEDGVRKNP 204
+ + A R KG + DL + + FE R + + + +R+NP
Sbjct: 319 AMMEVAGQRAEKGVVDEAADFDLDIRMMRFEHLMDRRPFLLNDVL----------LRQNP 368
Query: 205 MNYDTWFDYIRLEERVG----NQERVREVYERAIANVPPAEEKRYWQRYIYLWINYALYK 260
N + W E+RV N V Y AIA V P K+ + LW NYA +
Sbjct: 369 NNVNEW------EKRVALWGDNHNEVVNTYTNAIAAVQP---KKASGPFHQLWANYAKFY 419
Query: 261 EVDAGDLERTRDVYRTLFIFYFSFSPRMEERRIFKKYIEMELCLGNIDPCRKLYEKYLEW 320
E GDL R + F +E ++ ++ EMEL N + ++ K ++
Sbjct: 420 E-RGGDLRSARIIMEK--AVKVPFKSVVELADMWIEWAEMELRNDNFEEAVRIMAKAVQ- 475
Query: 321 SPENCYA-------------------WSKYTELEKSLDETERARA----IFELAIAQP 355
+P+ WS Y +L +S+ E + IFEL IA P
Sbjct: 476 APKRSTVDYFDETLTPQQRVHKSWKLWSFYVDLVESVGTLEDTKKVYERIFELRIATP 533
Score = 33.5 bits (75), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 78/190 (41%), Gaps = 22/190 (11%)
Query: 17 PRVDQLWNNYI-RMEENLGNVAGARQIFERWMHWMPDHEGWLSYIKFKLRYNEVQRARH- 74
P +LWN Y+ + + ++ R +FE+ + P + Y+ + E ARH
Sbjct: 566 PVAFELWNMYLTKAVDRKISIERLRDLFEQAVEGCPPKFAKIIYLMYGNLEEERGLARHA 625
Query: 75 --IFERLVQCHP-------YNLSAWINFADFEMKMGEVDRARNVYECAVEIFLADDHDEA 125
I+ER + +N + ++F + R +YE A+ A DEA
Sbjct: 626 MRIYERATRAVSDEDRADMFNFYITKSASNFGLP-----STRQIYERAIA---ALPDDEA 677
Query: 126 EQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYGDREGIE 185
+ + FA E+ E DRAR IY A + K+ FE Q+G+ + +
Sbjct: 678 RDMCLKFADMEK---RLGEIDRARAIYGHASQFCDPRTTPAFWTKWEQFEVQHGNEDTFK 734
Query: 186 DAIAGKMRLQ 195
+ + K +Q
Sbjct: 735 EMLRIKRAVQ 744
>sp|Q7SAK5|SYF1_NEUCR Pre-mRNA-splicing factor syf-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=syf-1 PE=3 SV=1
Length = 829
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 136/324 (41%), Gaps = 59/324 (18%)
Query: 53 HEGWLSYIKFKLRYNEVQRARHIFERLVQCHPYNLSA-----WINFADFEMKMGEVDRAR 107
H+ W +Y KF ++ AR I E+ V+ PY A WI +A+ E++ D A
Sbjct: 406 HQLWTNYAKFYEAGGDLSSARRIMEKAVKV-PYKSVAELADMWIEWAEMELRNECFDEAM 464
Query: 108 NVYECAVEIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDL 167
V AV+ D F+E + ++ ++ F +D + + D
Sbjct: 465 KVMAKAVQAPKRSTVD----------YFDETLSPQQRVHKSWKLWSFYVDLVESVSSLDE 514
Query: 168 YRKFLAFEKQYGDREGIEDAIAGKMRLQ------------YEDGVR--KNPMNYDTWFDY 213
RK +E+ + R + L YE G+ P+ ++ W Y
Sbjct: 515 TRK--VYERIFELRIATPQTVVNYANLLEEHKYFEESFKIYERGLDLFSYPVAFELWNLY 572
Query: 214 I-RLEERVGNQERVREVYERAIANVPPAEEKRYWQRYIYLWINYALYKEVDAGDLERTRD 272
+ + +R + ER+R+++E+A+ + PP + + IYL +Y G+LE R
Sbjct: 573 LTKAVDRKISIERLRDLFEQAVEDCPPK-----FAKVIYL-----MY-----GNLEEERG 617
Query: 273 VYR-TLFIFYFSFSPRMEERR--IFKKYIEMELCLGNIDPCRKLYEKYLEWSPEN----- 324
+ R + I+ + +E R +F YI + R +YE+ + P+
Sbjct: 618 LARHAMRIYERATRAVADEDRADMFNFYITKSASNFGLPSTRPIYERAIAALPDAEARDM 677
Query: 325 CYAWSKYTELEKSLDETERARAIF 348
C K+ ++EK L E +RARAI+
Sbjct: 678 CL---KFADMEKRLGEIDRARAIY 698
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 135/358 (37%), Gaps = 59/358 (16%)
Query: 10 DRVVTLSPR-----VDQLWNNYIRMEENLGNVAGARQIFER-----WMHWMPDHEGWLSY 59
D + + P+ + QLW NY + E G+++ AR+I E+ + + W+ +
Sbjct: 391 DAIEAIQPKKAVGALHQLWTNYAKFYEAGGDLSSARRIMEKAVKVPYKSVAELADMWIEW 450
Query: 60 IKFKLRYNEVQRARHIFERLVQCHPYNL------------------SAWINFADFEMKMG 101
+ +LR A + + VQ + W + D +
Sbjct: 451 AEMELRNECFDEAMKVMAKAVQAPKRSTVDYFDETLSPQQRVHKSWKLWSFYVDLVESVS 510
Query: 102 EVDRARNVYECAVEIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPK 161
+D R VYE E+ +A Q V +A E +E+ + IY+ LD
Sbjct: 511 SLDETRKVYERIFELRIA-----TPQTVVNYANLLEEHKYFEESFK---IYERGLDLFSY 562
Query: 162 GRAEDLYRKFLAFEKQYGDREGIEDAIAGKMRLQYEDGVRKNPMNYD--TWFDYIRLEER 219
A +L+ +L K + IE ++R +E V P + + Y LEE
Sbjct: 563 PVAFELWNLYLT--KAVDRKISIE-----RLRDLFEQAVEDCPPKFAKVIYLMYGNLEEE 615
Query: 220 VGNQERVREVYERAIANVPPAEEKRYWQRYIYLWINYALYKEVDAGDLERTRDVYRTLFI 279
G +YERA V A+E R N+ + K L TR +Y
Sbjct: 616 RGLARHAMRIYERATRAV--ADEDRADM------FNFYITKSASNFGLPSTRPIYERA-- 665
Query: 280 FYFSFSPRMEERRIFKKYIEMELCLGNIDPCRKLYEKYLEWSP--ENCYAWSKYTELE 335
+ P E R + K+ +ME LG ID R +Y ++ N W+K+ + E
Sbjct: 666 --IAALPDAEARDMCLKFADMEKRLGEIDRARAIYGHASQFCDPRTNPGFWTKWDQFE 721
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 122/298 (40%), Gaps = 65/298 (21%)
Query: 90 WINFADFEMKMGEVDRARNVYECAVEIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRAR 149
W A + ++ G +RAR+V+E + + + +F ++ +FEE +
Sbjct: 266 WCGLATYWIRRGSFERARDVFEEGITTVMT--VRDFTLVFDSYTEFEESIIS-------- 315
Query: 150 CIYKFALDRIPKGRAE-----DLYRKFLAFEKQYGDREGIEDAIAGKMRLQYEDGVRKNP 204
+ + A R KG + DL + + FE R + + + +R+NP
Sbjct: 316 ALMEMASTRAEKGEVDEVADFDLDIRMMRFEHLMDRRPFLLNDVL----------LRQNP 365
Query: 205 MNYDTWFDYIRLEERVG----NQERVREVYERAIANVPPAEEKRYWQRYIYLWINYALYK 260
N W E+RV N+E V + Y AI + P K+ LW NYA +
Sbjct: 366 NNVTEW------EKRVALWGDNKEEVVKTYLDAIEAIQP---KKAVGALHQLWTNYAKFY 416
Query: 261 EVDAGDLERTRDVY-RTLFIFYFSFSPRMEERRIFKKYIEMELCLGNIDPCRKLYEKYLE 319
E GDL R + + + + Y S + E ++ ++ EMEL D K+ K ++
Sbjct: 417 EA-GGDLSSARRIMEKAVKVPYKSVA---ELADMWIEWAEMELRNECFDEAMKVMAKAVQ 472
Query: 320 -------------WSPE-----NCYAWSKYTELEK---SLDETERA-RAIFELAIAQP 355
SP+ + WS Y +L + SLDET + IFEL IA P
Sbjct: 473 APKRSTVDYFDETLSPQQRVHKSWKLWSFYVDLVESVSSLDETRKVYERIFELRIATP 530
>sp|Q2KJJ0|PRP6_BOVIN Pre-mRNA-processing factor 6 OS=Bos taurus GN=PRPF6 PE=2 SV=1
Length = 941
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 99/243 (40%), Gaps = 22/243 (9%)
Query: 11 RVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEG-WLSYIKFKLRYNEV 69
R V P+ + LW + + G+V AR I P+ E WL+ +K + NE
Sbjct: 599 RAVAHCPKAEVLWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEY 658
Query: 70 QRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLADDHDEAEQLF 129
+RAR + + P ++ E +G + A+ + E A++ + ++ +L+
Sbjct: 659 ERARRLLAKARSSAP-TARVFMKSVKLEWVLGNLVAAQELCEEALKHY-----EDFPKLW 712
Query: 130 VAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYGDREGIEDAIA 189
+ + EE + ++AR Y L + P + L+ E++ G AI
Sbjct: 713 MMKGQIEEQE---ELVEKAREAYNQGLKKCP--HSTPLWLLLSRLEEKVGQLTRAR-AIL 766
Query: 190 GKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIANVPPAEEKRYWQRY 249
K RL KNP N W + +RLE R G + + +A+ P W
Sbjct: 767 EKSRL-------KNPKNPGLWLESVRLEYRAGLKNIASTLMAKALQECP--NSGVLWSEA 817
Query: 250 IYL 252
I+L
Sbjct: 818 IFL 820
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 131/345 (37%), Gaps = 42/345 (12%)
Query: 10 DRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMP-DHEGWLSYIKFKLRYNE 68
R V P +LW R+E AR++ + +P D W++ K +
Sbjct: 424 SRAVECCPTSVELWLALARLE----TYENARKVLNKARENIPTDRHIWITAAKLEEANGN 479
Query: 69 VQRARHIFERLVQCH-----PYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLADDHD 123
Q I +R + N WI A+ K G V + V + I + ++
Sbjct: 480 TQMVEKIIDRAITSLRANGVEINREQWIQDAEECDKAGSVATCQAVMRAVIGIGIEEEDR 539
Query: 124 EAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYGDREG 183
+ + A + C AR IY +AL P ++ ++ + FEK +G RE
Sbjct: 540 KHTWMEDADSCVAHNALEC-----ARAIYAYALQVFPSKKS--VWLRAAYFEKNHGTRES 592
Query: 184 IEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIANVPPAEEK 243
+E + + V P W + + G+ R + A P +EE
Sbjct: 593 LEALL--------QRAVAHCPKAEVLWLMGAKSKWLAGDVPAARSILALAFQANPNSEE- 643
Query: 244 RYWQRYIYLWINYALYKEVDAGDLERTRDVYRTLFIFYFSFSPRMEERRIFKKYIEMELC 303
+W+ A+ E + + ER R L S +P R+F K +++E
Sbjct: 644 --------IWL-AAVKLESENNEYERAR----RLLAKARSSAPTA---RVFMKSVKLEWV 687
Query: 304 LGNIDPCRKLYEKYLEWSPENCYAWSKYTELEKSLDETERARAIF 348
LGN+ ++L E+ L+ + W ++E+ + E+AR +
Sbjct: 688 LGNLVAAQELCEEALKHYEDFPKLWMMKGQIEEQEELVEKAREAY 732
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 81/220 (36%), Gaps = 24/220 (10%)
Query: 17 PRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEG-WLSYIKFKLRYNEVQRARHI 75
P +W E+N G + +R + P E WL K K +V AR I
Sbjct: 571 PSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSKWLAGDVPAARSI 630
Query: 76 FERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLADDHDEAEQLFVAFAKF 135
Q +P + W+ E + E +RAR + + A ++F+ K
Sbjct: 631 LALAFQANPNSEEIWLAAVKLESENNEYERARRL------LAKARSSAPTARVFMKSVKL 684
Query: 136 EEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYGDREGIEDA--IAGKMR 193
E + N E+ + + F K + + IE+ + K R
Sbjct: 685 EWVLGNLVAAQEL---------------CEEALKHYEDFPKLWMMKGQIEEQEELVEKAR 729
Query: 194 LQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERA 233
Y G++K P + W RLEE+VG R R + E++
Sbjct: 730 EAYNQGLKKCPHSTPLWLLLSRLEEKVGQLTRARAILEKS 769
Score = 36.2 bits (82), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Query: 1 FIDHGRNAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEG-WLSY 59
++ R A+++ + P LW R+EE +G + AR I E+ P + G WL
Sbjct: 724 LVEKAREAYNQGLKKCPHSTPLWLLLSRLEEKVGQLTRARAILEKSRLKNPKNPGLWLES 783
Query: 60 IKFKLRYNEVQRARHIFERLVQCHPYNLSAW 90
++ + R A + + +Q P + W
Sbjct: 784 VRLEYRAGLKNIASTLMAKALQECPNSGVLW 814
Score = 35.4 bits (80), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 69/334 (20%), Positives = 131/334 (39%), Gaps = 65/334 (19%)
Query: 67 NEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLADDHDEAE 126
N++++AR + + + + +P++ AWI A E G++ ARN+ E+ ++E
Sbjct: 289 NDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMC-----PKSE 343
Query: 127 QLFVAFAKFEEMGCNCK-----------------------ETD-RARC-IYKFALDRIPK 161
+++ A+ + G K ETD RA+ + + AL+ +P
Sbjct: 344 DVWLEAARLQP-GDTAKAVVAQAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPN 402
Query: 162 GRAEDLYRKFLAFEKQYGDREGIEDAI----------AGKMRLQYEDGVRKN-------- 203
+ L++ + E+ R + A+ RL+ + RK
Sbjct: 403 --SVRLWKAAVELEEPEDARIMLSRAVECCPTSVELWLALARLETYENARKVLNKARENI 460
Query: 204 PMNYDTWFDYIRLEERVGNQERVREVYERAIANVPPAEEKRYWQRYIYLWINYALYKEVD 263
P + W +LEE GN + V ++ +RAI ++ + WI A +E D
Sbjct: 461 PTDRHIWITAAKLEEANGNTQMVEKIIDRAITSL----RANGVEINREQWIQDA--EECD 514
Query: 264 -AGDLERTRDVYRTLFIFYFSFSPRMEERRIFKKYIEMELCLGN--IDPCRKLYEKYLEW 320
AG + + V R + EE R + + C+ + ++ R +Y L+
Sbjct: 515 KAGSVATCQAVMRAVIGIGIE-----EEDRKHTWMEDADSCVAHNALECARAIYAYALQV 569
Query: 321 SPENCYAWSKYTELEKSLDETERARAIFELAIAQ 354
P W + EK+ E A+ + A+A
Sbjct: 570 FPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAH 603
>sp|Q4WVF4|SYF1_ASPFU Pre-mRNA-splicing factor syf1 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=syf1 PE=3
SV=1
Length = 839
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 118/297 (39%), Gaps = 63/297 (21%)
Query: 90 WINFADFEMKMGEVDRARNVYECAVEIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRAR 149
W A + + G ++AR+V+E + + + +F A+ +FEE
Sbjct: 263 WAGLATYWITKGNFEKARDVFEEGITTVMT--VRDFTLIFDAYVEFEESIIGS------- 313
Query: 150 CIYKFALDRIPKGRAE-----DLYRKFLAFEKQYGDREGIEDAIAGKMRLQYEDGVRKNP 204
+ + A R KG + DL + L FE+ R + + + +R+NP
Sbjct: 314 -LMEAAAVRADKGNVDEDADFDLDLRMLRFEQLMDRRPFLVNDVL----------LRQNP 362
Query: 205 MNYDTWFDYIRLEERVG----NQERVREVYERAIANVPPAEEKRYWQRYIYLWINYALYK 260
N W E+RV N+E + Y AIA + P K+ ++ LW+NYA +
Sbjct: 363 NNVIEW------EKRVALWGDNKEEIVNTYTAAIAAINP---KKAHGKFSELWVNYAKFY 413
Query: 261 EVDAGDLERTRDVYRTLFIFYFSFSPRMEERRIFKKYIEMELCLGNIDPCRKLYEKYLE- 319
E GDL+ R ++ F + + + ++ EMEL N D + K +
Sbjct: 414 E-SGGDLDTARVIFDKAVKVPFKSVAELAD--TWCEWAEMELRSENFDKAVDIMAKATQA 470
Query: 320 ------------WSPE-----NCYAWSKYTELEKSLDETERARA----IFELAIAQP 355
SP+ + WS Y +L +S+ E R IFEL IA P
Sbjct: 471 PKKSTVDYFDETLSPQQRVHKSWKLWSFYVDLVESVATLEETRKVYERIFELRIATP 527
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 133/325 (40%), Gaps = 61/325 (18%)
Query: 53 HEGWLSYIKFKLRYNEVQRARHIFERLVQCHPYNLSA-----WINFADFEMKMGEVDRAR 107
E W++Y KF ++ AR IF++ V+ P+ A W +A+ E++ D+A
Sbjct: 403 SELWVNYAKFYESGGDLDTARVIFDKAVKV-PFKSVAELADTWCEWAEMELRSENFDKAV 461
Query: 108 NVYECAVEIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDL 167
++ A + D F+E + ++ ++ F +D + +
Sbjct: 462 DIMAKATQAPKKSTVD----------YFDETLSPQQRVHKSWKLWSFYVDLVESVATLEE 511
Query: 168 YRKFLAFEKQYGDREGIEDAIAGKMRL------------QYEDGVR--KNPMNYDTWFDY 213
RK +E+ + R + L YE G+ P+ ++ W Y
Sbjct: 512 TRK--VYERIFELRIATPQTVVNYANLLEEHKYFEDSFKVYERGLDLFSYPVAFELWNLY 569
Query: 214 IR--LEERVGNQERVREVYERAIANVPPAEEKRYWQRYIYLWINYALYKEVDAGDLERTR 271
+ ++ ++G ER+R+++E+A+ PP K + Y G+LE R
Sbjct: 570 LTKAVDRKIG-IERLRDLFEQALDGCPPKFAKPLYLMY---------------GNLEEER 613
Query: 272 DVYR-TLFIFYFSFSPRMEERR--IFKKYIEMELCLGNIDPCRKLYEKYLEWSP-----E 323
+ R + I+ + +E R +F+ YI + R +YE+ + P E
Sbjct: 614 GLARHAMRIYERATRAVSDEDRFEMFEFYITKSASNFGLTSTRPIYERAIAALPDQEAKE 673
Query: 324 NCYAWSKYTELEKSLDETERARAIF 348
C K+ ++E+ L E +RARAI+
Sbjct: 674 MCL---KFADMERRLGEIDRARAIY 695
Score = 40.4 bits (93), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 122/323 (37%), Gaps = 54/323 (16%)
Query: 18 RVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDH------EGWLSYIKFKLRYNEVQR 71
+ +LW NY + E+ G++ AR IF++ + +P + W + + +LR +
Sbjct: 401 KFSELWVNYAKFYESGGDLDTARVIFDKAVK-VPFKSVAELADTWCEWAEMELRSENFDK 459
Query: 72 ARHIFERLVQCHPYNL------------------SAWINFADFEMKMGEVDRARNVYECA 113
A I + Q + W + D + ++ R VYE
Sbjct: 460 AVDIMAKATQAPKKSTVDYFDETLSPQQRVHKSWKLWSFYVDLVESVATLEETRKVYERI 519
Query: 114 VEIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLA 173
E+ +A Q V +A E K + + +Y+ LD A +L+ +L
Sbjct: 520 FELRIA-----TPQTVVNYANLLE---EHKYFEDSFKVYERGLDLFSYPVAFELWNLYLT 571
Query: 174 FEKQYGDREGIEDAIAGKMRLQYEDGVRKNPMNY--DTWFDYIRLEERVGNQERVREVYE 231
K + GIE ++R +E + P + + Y LEE G +YE
Sbjct: 572 --KAVDRKIGIE-----RLRDLFEQALDGCPPKFAKPLYLMYGNLEEERGLARHAMRIYE 624
Query: 232 RAIANVPPAEEKRYWQRYIYLWINYALYKEVDAGDLERTRDVYRTLFIFYFSFSPRMEER 291
RA V ++E R+ Y + K L TR +Y + P E +
Sbjct: 625 RATRAV--SDEDRFEMFEFY------ITKSASNFGLTSTRPIYERA----IAALPDQEAK 672
Query: 292 RIFKKYIEMELCLGNIDPCRKLY 314
+ K+ +ME LG ID R +Y
Sbjct: 673 EMCLKFADMERRLGEIDRARAIY 695
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 93/222 (41%), Gaps = 31/222 (13%)
Query: 17 PRVDQLWNNYIR--MEENLGNVAGARQIFERWMHWMPDHEGWLSYIKFKLRYNEVQRARH 74
P +LWN Y+ ++ +G + R +FE+ + P Y+ + E ARH
Sbjct: 560 PVAFELWNLYLTKAVDRKIG-IERLRDLFEQALDGCPPKFAKPLYLMYGNLEEERGLARH 618
Query: 75 ---IFERLVQCHPYNLSAWINFADFEMKMGE------VDRARNVYECAVEIFLADDHDEA 125
I+ER + +S F FE + + + R +YE A+ A EA
Sbjct: 619 AMRIYERATRA----VSDEDRFEMFEFYITKSASNFGLTSTRPIYERAIA---ALPDQEA 671
Query: 126 EQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYGDREGIE 185
+++ + FA E E DRAR IY A ++K+ AFE Q+G+ E
Sbjct: 672 KEMCLKFADMER---RLGEIDRARAIYGHASQFCDPRTNAGFWQKWEAFEVQHGN----E 724
Query: 186 DAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVR 227
D +R++ R Y+T ++I + +Q+R +
Sbjct: 725 DTFKEMLRIK-----RSVQAQYNTDVNFIASQAIARSQQRAQ 761
>sp|Q8BG19|TMTC4_MOUSE Transmembrane and TPR repeat-containing protein 4 OS=Mus musculus
GN=Tmtc4 PE=2 SV=1
Length = 741
Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
Query: 7 NAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMP-DHEGWLSYIKFKLR 65
NAW L P WNN I + +N GN+A A + + +P DH S +
Sbjct: 605 NAWRNATVLKPEHSLAWNNMIILLDNTGNLAQAEAVGREALQLIPNDHSLMFSLANVLGK 664
Query: 66 YNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEI 116
+ + + +F + ++ +P S N A + G +D A+ YE ++++
Sbjct: 665 SQKYKESEALFLKAIKANPNVASYHGNLAVLYHRWGHLDSAKKHYEISLQL 715
>sp|O94906|PRP6_HUMAN Pre-mRNA-processing factor 6 OS=Homo sapiens GN=PRPF6 PE=1 SV=1
Length = 941
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 83/220 (37%), Gaps = 24/220 (10%)
Query: 17 PRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEG-WLSYIKFKLRYNEVQRARHI 75
P +W E+N G + +R + P E WL K K +V AR I
Sbjct: 571 PSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSKWLAGDVPAARSI 630
Query: 76 FERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLADDHDEAEQLFVAFAKF 135
Q +P + W+ E + E +RAR + + A ++F+ K
Sbjct: 631 LALAFQANPNSEEIWLAAVKLESENDEYERARRL------LAKARSSAPTARVFMKSVKL 684
Query: 136 EEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYGDREGIEDA--IAGKMR 193
E + N R + E+ R + F K + + IE+ + K R
Sbjct: 685 EWVQDNI---------------RAAQDLCEEALRHYEDFPKLWMMKGQIEEQKEMMEKAR 729
Query: 194 LQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERA 233
Y G++K P + W RLEE++G R R + E++
Sbjct: 730 EAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAILEKS 769
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 97/243 (39%), Gaps = 22/243 (9%)
Query: 11 RVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEG-WLSYIKFKLRYNEV 69
R V P+ + LW + + G+V AR I P+ E WL+ +K + +E
Sbjct: 599 RAVAHCPKAEVLWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENDEY 658
Query: 70 QRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLADDHDEAEQLF 129
+RAR + + P ++ E + A+++ E A+ + ++ +L+
Sbjct: 659 ERARRLLAKARSSAP-TARVFMKSVKLEWVQDNIRAAQDLCEEALRHY-----EDFPKLW 712
Query: 130 VAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYGDREGIEDAIA 189
+ + EE + ++AR Y L + P + L+ E++ G AI
Sbjct: 713 MMKGQIEEQK---EMMEKAREAYNQGLKKCP--HSTPLWLLLSRLEEKIGQLTRAR-AIL 766
Query: 190 GKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIANVPPAEEKRYWQRY 249
K RL KNP N W + +RLE R G + + +A+ P W
Sbjct: 767 EKSRL-------KNPKNPGLWLESVRLEYRAGLKNIANTLMAKALQECP--NSGILWSEA 817
Query: 250 IYL 252
I+L
Sbjct: 818 IFL 820
Score = 36.2 bits (82), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 70/344 (20%), Positives = 135/344 (39%), Gaps = 67/344 (19%)
Query: 67 NEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLADDHDEAE 126
N++++AR + + + + +P++ AWI A E G++ ARN+ E+ ++E
Sbjct: 289 NDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMC-----PKSE 343
Query: 127 QLFVAFAKFEEMGCNCK-----------------------ETD-RARC-IYKFALDRIPK 161
+++ A+ + G K ETD RA+ + + AL+ +P
Sbjct: 344 DVWLEAARLQP-GDTAKAVVAQAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPN 402
Query: 162 GRAEDLYRKFLAFEKQYGDREGIEDAIA----------GKMRLQYEDGVRKN-------- 203
+ L++ + E+ R + A+ RL+ + RK
Sbjct: 403 --SVRLWKAAVELEEPEDARIMLSRAVECCPTSVELWLALARLETYENARKVLNKARENI 460
Query: 204 PMNYDTWFDYIRLEERVGNQERVREVYERAIANVPPAEEKRYWQRYIYLWINYALYKEVD 263
P + W +LEE GN + V ++ +RAI ++ R + IN + + D
Sbjct: 461 PTDRHIWITAAKLEEANGNTQMVEKIIDRAITSL----------RANGVEINREQWIQ-D 509
Query: 264 AGDLERTRDVYRTLFIFYFSFSPRMEERRIFKKYIE-MELCLGN--IDPCRKLYEKYLEW 320
A + +R V + +EE ++E + C+ + ++ R +Y L+
Sbjct: 510 AEECDRAGSVATCQAVMRAVIGIGIEEEDRKHTWMEDADSCVAHNALECARAIYAYALQV 569
Query: 321 SPENCYAWSKYTELEKSLDETERARAIFELAIAQPILDLPEFLW 364
P W + EK+ E A+ + A+A E LW
Sbjct: 570 FPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAH--CPKAEVLW 611
Score = 35.4 bits (80), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Query: 1 FIDHGRNAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEG-WLSY 59
++ R A+++ + P LW R+EE +G + AR I E+ P + G WL
Sbjct: 724 MMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAILEKSRLKNPKNPGLWLES 783
Query: 60 IKFKLRYNEVQRARHIFERLVQCHPYNLSAW 90
++ + R A + + +Q P + W
Sbjct: 784 VRLEYRAGLKNIANTLMAKALQECPNSGILW 814
>sp|Q54VF4|Y8236_DICDI TPR-containing protein DDB_G0280363 OS=Dictyostelium discoideum
GN=DDB_G0280363 PE=4 SV=2
Length = 1304
Score = 47.4 bits (111), Expect = 2e-04, Method: Composition-based stats.
Identities = 73/352 (20%), Positives = 139/352 (39%), Gaps = 43/352 (12%)
Query: 23 WNNYIRMEE---NLGNVAGARQIFERWMHWMPD-HEGWLSYIKFKLRYNEVQRARHIFER 78
W Y+ + + N+ AR+ + + P +GWL Y K + Y +++ + I +
Sbjct: 769 WRVYLELADLANRQNNLKLARKFYRKVTSTQPYISQGWLEYAKMEEDYGRLEKCQKILQL 828
Query: 79 LVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLADDHDEAEQLFVAFAKFEEM 138
++ P+N S I E KM ++ AR + L+ D++ ++ + E
Sbjct: 829 GLKHCPFNESLLIKGIRHEEKMDNLEGARAL--------LSQLRDQS--IYKTWRAVMEG 878
Query: 139 G---CNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYGDREGIEDAIAGKMRLQ 195
G D AR I+K+ + +P +Y++ E++ + E + +
Sbjct: 879 GLLEARAGNIDVARKIFKYLMKHVP--WYGPIYQEAYKLEERCEEYERAINIV------- 929
Query: 196 YEDGVRKNPMNYDTWFDYIRLEERV--GNQERVREVYERAIANVPPAEEKRYWQRYIYLW 253
E G+ ++P WF +RL E+ G + R ERA V + W+ Y
Sbjct: 930 -EKGLFEDPKYGPLWFSALRLYEKTSHGFLQSTRNTVERARQAV---SREVTWKIY---- 981
Query: 254 INYALYKEVDAGDLERTRDVYRTLFIFYFSFSPRMEERRIFKKYIEMELCLGNIDPCRKL 313
++ + + + R ++ P +++ EL NI RKL
Sbjct: 982 -----FEAAQIEERSKNLTLSRAAYVKSVELCPENLLWKVWLGGSRTELNADNICIARKL 1036
Query: 314 YEKYLEWSPENCYAWS--KYTELEKSLDETERARAIFELAIAQPILDLPEFL 363
+ LE P + +Y+ LE+ ++R I ++A + LD FL
Sbjct: 1037 VFRALEEVPSKLRSLVLLEYSRLEEYAGNINKSRRILKMAHVEARLDWKVFL 1088
Score = 42.4 bits (98), Expect = 0.005, Method: Composition-based stats.
Identities = 74/333 (22%), Positives = 132/333 (39%), Gaps = 53/333 (15%)
Query: 5 GRNAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEGWL-SYIKFK 63
R + +V + P + Q W Y +MEE+ G + ++I + + P +E L I+ +
Sbjct: 788 ARKFYRKVTSTQPYISQGWLEYAKMEEDYGRLEKCQKILQLGLKHCPFNESLLIKGIRHE 847
Query: 64 LRYNEVQRARHIFERLVQCHPYNL-SAWINFADFEMKMGEVDRARNVYECAVEIFLADDH 122
+ + ++ AR + +L Y A + E + G +D AR +++ +L
Sbjct: 848 EKMDNLEGARALLSQLRDQSIYKTWRAVMEGGLLEARAGNIDVARKIFK-----YLMKHV 902
Query: 123 DEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKG-----RAEDLYRK----FLA 173
++ K EE C+E +RA I + L PK A LY K FL
Sbjct: 903 PWYGPIYQEAYKLEE---RCEEYERAINIVEKGLFEDPKYGPLWFSALRLYEKTSHGFLQ 959
Query: 174 FEKQYGDREGIEDAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERA 233
R +E A R + + +F+ ++EER N R Y ++
Sbjct: 960 -----STRNTVERARQAVSR----------EVTWKIYFEAAQIEERSKNLTLSRAAYVKS 1004
Query: 234 IANVPPAEEKRYWQRYIYLWINYALYKEVDAGDLERTRD-VYRTLFIFYFSFSPRMEERR 292
+ P E W+ +W+ + E++A ++ R V+R L P
Sbjct: 1005 VELCP---ENLLWK----VWLGGS-RTELNADNICIARKLVFRAL-----EEVPSKLRSL 1051
Query: 293 IFKKYIEMELCLGNIDPCRKLY-----EKYLEW 320
+ +Y +E GNI+ R++ E L+W
Sbjct: 1052 VLLEYSRLEEYAGNINKSRRILKMAHVEARLDW 1084
>sp|Q5T4D3|TMTC4_HUMAN Transmembrane and TPR repeat-containing protein 4 OS=Homo sapiens
GN=TMTC4 PE=2 SV=2
Length = 741
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
Query: 7 NAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMP-DHEGWLSYIKFKLR 65
NAW L P WNN I + +N GN+A A + + +P DH S +
Sbjct: 605 NAWRNATVLKPEHSLAWNNMIILLDNTGNLAQAEAVGREALELIPNDHSLMFSLANVLGK 664
Query: 66 YNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEI 116
+ + + +F + ++ +P S N A + G +D A+ YE ++++
Sbjct: 665 SQKYKESEALFLKAIKANPNAASYHGNLAVLYHRWGHLDLAKKHYEISLQL 715
>sp|Q5RCC2|PRP6_PONAB Pre-mRNA-processing factor 6 OS=Pongo abelii GN=PRPF6 PE=2 SV=1
Length = 941
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/326 (20%), Positives = 122/326 (37%), Gaps = 33/326 (10%)
Query: 26 YIRMEENLGNVAGARQIFERWMHWMPDHEGWLSYIKFKLRYNEVQRARHIFERLVQCHPY 85
YIR E ++ +++ + + +P+ + K + E + AR + R V+C P
Sbjct: 376 YIRAAELETDIRAKKRVLRKALEHVPNS---VRLWKAAVELEEPEDARIMLSRAVECCPT 432
Query: 86 NLSAWINFADFEMKMGEVDRARNVYECAVEIFLADDHDEAEQLFVAFAKFEEMGCNCKET 145
++ W+ A E + AR V A E D H +++ AK EE N +
Sbjct: 433 SVELWLALARLET----YENARKVLNKARENIPTDRH-----IWITAAKLEEANGNTQMV 483
Query: 146 DRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYGDREGIEDAIAGKMRLQYEDGVRKNPM 205
++ I A+ + + ++ R+ + + DR G MR G+ +
Sbjct: 484 EK---IIDRAITSL-RANGVEINREQWIQDAEECDRAGSVATCQAVMRAVIGIGIEEEDR 539
Query: 206 NYDTWFDYIRLEERVGNQERVREVYERAIANVPPAEEKRYWQRYIYLWINYALYKEVDAG 265
+ TW + E R +Y A+ P +K W R Y N+
Sbjct: 540 KH-TWMEDADSCVAHNALECARAIYAYALQVFP--SKKSVWLRAAYFGKNHG-------- 588
Query: 266 DLERTRDVYRTLFIFYFSFSPRMEERRIFKKYIEMELCLGNIDPCRKLYEKYLEWSPENC 325
TR+ L + P+ E ++ + + G++ R + + +P +
Sbjct: 589 ----TRESLEALLQRAVAHCPKAEV--LWLMGAKSKWLTGDVPAARSILALAFQANPNSE 642
Query: 326 YAWSKYTELEKSLDETERARAIFELA 351
W +LE DE ERAR + A
Sbjct: 643 EIWLAAVKLESENDEYERARRLLAKA 668
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 82/220 (37%), Gaps = 24/220 (10%)
Query: 17 PRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEG-WLSYIKFKLRYNEVQRARHI 75
P +W +N G + +R + P E WL K K +V AR I
Sbjct: 571 PSKKSVWLRAAYFGKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSKWLTGDVPAARSI 630
Query: 76 FERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLADDHDEAEQLFVAFAKF 135
Q +P + W+ E + E +RAR + + A ++F+ K
Sbjct: 631 LALAFQANPNSEEIWLAAVKLESENDEYERARRL------LAKARSSAPTARVFMKSVKL 684
Query: 136 EEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYGDREGIEDA--IAGKMR 193
E + N R + E+ R + F K + + IE+ + K R
Sbjct: 685 EWVQDNI---------------RAAQDLCEEALRHYEDFPKLWMMKGQIEEQKEMMEKAR 729
Query: 194 LQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERA 233
Y G++K P + W RLEE++G R R + E++
Sbjct: 730 EAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRTRAILEKS 769
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 98/244 (40%), Gaps = 24/244 (9%)
Query: 11 RVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEG-WLSYIKFKLRYNEV 69
R V P+ + LW + + G+V AR I P+ E WL+ +K + +E
Sbjct: 599 RAVAHCPKAEVLWLMGAKSKWLTGDVPAARSILALAFQANPNSEEIWLAAVKLESENDEY 658
Query: 70 QRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVEIFLADDHDEAEQLF 129
+RAR + + P ++ E + A+++ E A+ + ++ +L+
Sbjct: 659 ERARRLLAKARSSAP-TARVFMKSVKLEWVQDNIRAAQDLCEEALRHY-----EDFPKLW 712
Query: 130 VAFAKFEEMGCNCKET-DRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYGDREGIEDAI 188
+ + EE KE ++AR Y L + P + L+ E++ G AI
Sbjct: 713 MMKGQIEEQ----KEMMEKAREAYNQGLKKCP--HSTPLWLLLSRLEEKIGQLTRTR-AI 765
Query: 189 AGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIANVPPAEEKRYWQR 248
K RL KNP N W + +RLE R G + + +A+ P W
Sbjct: 766 LEKSRL-------KNPKNPGLWLESVRLEYRAGLKNIANTLMAKALQECP--NSGILWSE 816
Query: 249 YIYL 252
I+L
Sbjct: 817 AIFL 820
Score = 33.9 bits (76), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Query: 1 FIDHGRNAWDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEG-WLSY 59
++ R A+++ + P LW R+EE +G + R I E+ P + G WL
Sbjct: 724 MMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRTRAILEKSRLKNPKNPGLWLES 783
Query: 60 IKFKLRYNEVQRARHIFERLVQCHPYNLSAW 90
++ + R A + + +Q P + W
Sbjct: 784 VRLEYRAGLKNIANTLMAKALQECPNSGILW 814
>sp|Q5BH69|SYF1_EMENI Pre-mRNA-splicing factor syf1 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=syf1
PE=3 SV=1
Length = 851
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 118/297 (39%), Gaps = 63/297 (21%)
Query: 90 WINFADFEMKMGEVDRARNVYECAVEIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRAR 149
W A + + G ++AR+V+E + + + +F ++ +FEE
Sbjct: 280 WAGLATYWITKGNFEKARDVFEEGITTVMT--VRDFTLIFDSYVEFEESIIGS------- 330
Query: 150 CIYKFALDRIPKGRAE-----DLYRKFLAFEKQYGDREGIEDAIAGKMRLQYEDGVRKNP 204
+ + A R G+A+ DL + L FE+ R + + + +R+NP
Sbjct: 331 -LMEAAAVRADNGKADEEADFDLDLRMLRFEQLMDRRPFLVNDVL----------LRQNP 379
Query: 205 MNYDTWFDYIRLEERVG----NQERVREVYERAIANVPPAEEKRYWQRYIYLWINYALYK 260
N W E+RV N + Y AIA + P K+ ++ LW+NYA +
Sbjct: 380 NNVIEW------EKRVALWGDNNVEIVNTYTAAIAAINP---KKAVGKFSELWVNYAKFY 430
Query: 261 EVDAGDLERTRDVYRTLFIFYFSFSPRMEERRIFKKYIEMELCLGNIDPCRKLYEKYLE- 319
E GDL+ R ++ F + E + ++ EMEL N D ++ K +
Sbjct: 431 E-RGGDLDTARIIFEKAVKVPFKSVNELAE--TWCEWAEMELRSENFDKAVEIMAKATQA 487
Query: 320 ------------WSPE-----NCYAWSKYTELEKSLDETERARA----IFELAIAQP 355
SP+ + WS Y +L +S+ E + IFEL IA P
Sbjct: 488 PKKSTVDYFDETLSPQQRIHKSWKLWSFYVDLVESVSSIEETKKVYERIFELRIATP 544
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 122/323 (37%), Gaps = 54/323 (16%)
Query: 18 RVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDH------EGWLSYIKFKLRYNEVQR 71
+ +LW NY + E G++ AR IFE+ + +P E W + + +LR +
Sbjct: 418 KFSELWVNYAKFYERGGDLDTARIIFEKAVK-VPFKSVNELAETWCEWAEMELRSENFDK 476
Query: 72 ARHIFERLVQCHPYNL------------------SAWINFADFEMKMGEVDRARNVYECA 113
A I + Q + W + D + ++ + VYE
Sbjct: 477 AVEIMAKATQAPKKSTVDYFDETLSPQQRIHKSWKLWSFYVDLVESVSSIEETKKVYERI 536
Query: 114 VEIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLA 173
E+ +A Q V +A E +E+ + +Y+ LD A +L+ +L
Sbjct: 537 FELRIA-----TPQTVVNYANLLEEHKYFEESFK---VYERGLDLFTYPVAFELWNLYLT 588
Query: 174 FEKQYGDREGIEDAIAGKMRLQYEDGVRKNPMNY--DTWFDYIRLEERVGNQERVREVYE 231
K + GIE ++R +E + P + + Y LEE G +YE
Sbjct: 589 --KAVDRKIGIE-----RLRDLFEQALDGCPPKFARPLYLMYGNLEEERGLARHAMRIYE 641
Query: 232 RAIANVPPAEEKRYWQRYIYLWINYALYKEVDAGDLERTRDVYRTLFIFYFSFSPRMEER 291
RA V ++E R+ Y + K L TR +Y + P E +
Sbjct: 642 RATRAV--SDEDRFEMFEFY------ITKSASNFGLPSTRPIYERA----IAALPDHEAK 689
Query: 292 RIFKKYIEMELCLGNIDPCRKLY 314
+ K+ EME LG ID R +Y
Sbjct: 690 EMCLKFAEMERRLGEIDRARAIY 712
Score = 40.8 bits (94), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 130/314 (41%), Gaps = 79/314 (25%)
Query: 90 WINFADFEMKMGEVDRARNVYECAVEIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRAR 149
W+N+A F + G++D AR ++E AV++ ++ AE + ++ EM + D+A
Sbjct: 423 WVNYAKFYERGGDLDTARIIFEKAVKVPFKSVNELAE----TWCEWAEMELRSENFDKAV 478
Query: 150 CIYKFALDRIPKGRAEDLYRKFLA-------------------------------FEKQY 178
I A + PK D + + L+ +E+ +
Sbjct: 479 EIMAKAT-QAPKKSTVDYFDETLSPQQRIHKSWKLWSFYVDLVESVSSIEETKKVYERIF 537
Query: 179 GDREGIEDAIAGKMRL------------QYEDGVR--KNPMNYDTWFDYIR--LEERVGN 222
R + L YE G+ P+ ++ W Y+ ++ ++G
Sbjct: 538 ELRIATPQTVVNYANLLEEHKYFEESFKVYERGLDLFTYPVAFELWNLYLTKAVDRKIG- 596
Query: 223 QERVREVYERAIANVPPAEEKRYWQRYIYLWINYALYKEVDAGDLERTRDVYR-TLFIFY 281
ER+R+++E+A+ PP + R +YL +Y G+LE R + R + I+
Sbjct: 597 IERLRDLFEQALDGCPPK-----FARPLYL-----MY-----GNLEEERGLARHAMRIYE 641
Query: 282 FSFSPRMEERR--IFKKYIEMELCLGNIDPCRKLYEKYLEWSP-----ENCYAWSKYTEL 334
+ +E R +F+ YI + R +YE+ + P E C K+ E+
Sbjct: 642 RATRAVSDEDRFEMFEFYITKSASNFGLPSTRPIYERAIAALPDHEAKEMCL---KFAEM 698
Query: 335 EKSLDETERARAIF 348
E+ L E +RARAI+
Sbjct: 699 ERRLGEIDRARAIY 712
Score = 37.7 bits (86), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 91/220 (41%), Gaps = 31/220 (14%)
Query: 17 PRVDQLWNNYIR--MEENLGNVAGARQIFERWMHWMPDHEGWLSYIKFKLRYNEVQRARH 74
P +LWN Y+ ++ +G + R +FE+ + P Y+ + E ARH
Sbjct: 577 PVAFELWNLYLTKAVDRKIG-IERLRDLFEQALDGCPPKFARPLYLMYGNLEEERGLARH 635
Query: 75 ---IFERLVQCHPYNLSAWINFADFEMKMGE------VDRARNVYECAVEIFLADDHDEA 125
I+ER + +S F FE + + + R +YE A+ DH+
Sbjct: 636 AMRIYERATRA----VSDEDRFEMFEFYITKSASNFGLPSTRPIYERAIAAL--PDHEAK 689
Query: 126 EQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYGDREGIE 185
E KF EM E DRAR IY A ++K+ AFE Q+G+ + +
Sbjct: 690 EMCL----KFAEMERRLGEIDRARAIYGHASQFCDPRTNAPFWQKWEAFEVQHGNEDTFK 745
Query: 186 DAIAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQER 225
+ + K +Q + Y+T ++I + +Q+R
Sbjct: 746 EMLRIKRSVQAQ---------YNTDVNFIASQAIARSQQR 776
Score = 32.7 bits (73), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Query: 9 WDRVVTLSPRVDQLWNNYIRMEENLGNVAGARQIFERWMHWMPDHEG---WLSYIKFKLR 65
++R + L ++ ++W Y+ V R+ F+R + +P + W Y F R
Sbjct: 116 FERALILLNKMPRIWEMYLTFMLQQPLVTQTRRTFDRALRALPVTQHNRIWKLYKTFA-R 174
Query: 66 YNEVQRARHIFERLVQCHPYNLSAWINF 93
Q A I+ R +Q HP N +IN
Sbjct: 175 SASGQTAVKIWARYMQIHPENAEEYINL 202
Score = 32.0 bits (71), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 41/224 (18%), Positives = 87/224 (38%), Gaps = 35/224 (15%)
Query: 56 WLSYIKFKLRYNEVQRARHIFERLVQCHPYNLSAWINFADFEMKMGEVDRARNVYECAVE 115
W Y+ + ++ + ++ER+ + +N+A+ + + + VYE ++
Sbjct: 513 WSFYVDLVESVSSIEETKKVYERIFELRIATPQTVVNYANLLEEHKYFEESFKVYERGLD 572
Query: 116 IFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFE 175
+F E L++ A ++G +R R +++ ALD P A LY + E
Sbjct: 573 LFTYPVAFELWNLYLTKAVDRKIGI-----ERLRDLFEQALDGCPPKFARPLYLMYGNLE 627
Query: 176 KQYGDR-------EGIEDAIAGKMRLQ-YEDGVRKNPMNY-------------------- 207
++ G E A++ + R + +E + K+ N+
Sbjct: 628 EERGLARHAMRIYERATRAVSDEDRFEMFEFYITKSASNFGLPSTRPIYERAIAALPDHE 687
Query: 208 --DTWFDYIRLEERVGNQERVREVYERAIANVPPAEEKRYWQRY 249
+ + +E R+G +R R +Y A P +WQ++
Sbjct: 688 AKEMCLKFAEMERRLGEIDRARAIYGHASQFCDPRTNAPFWQKW 731
>sp|Q54Z08|SYF1_DICDI Pre-mRNA-splicing factor SYF1 OS=Dictyostelium discoideum GN=xab2
PE=3 SV=1
Length = 850
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 90/180 (50%), Gaps = 19/180 (10%)
Query: 56 WLSYI-KFKLRYN--EVQRARHIFERLVQCHPYNLSA--WINFADFEMKMGEVDRARNVY 110
W++Y+ KF RY +++R R +FE+++ P S ++ +A+FE + G + VY
Sbjct: 570 WITYLTKFIQRYAGMKLERTRDLFEQVLSKVPPKESIIFYLMYANFEEQYGLARHSMAVY 629
Query: 111 ECAVEIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRK 170
+ A + +D + L++ A E G N + R I+ A++++P D+ K
Sbjct: 630 DRAAKSVDKEDRFKMYLLYIHRAS-EFFGVN-----QTREIFSKAIEQLPDQYVRDMCLK 683
Query: 171 FLAFEKQYGDREGIEDA-IAGKMRLQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVREV 229
F EK+YG+ + I G Q+ D R + ++TW D+ +L GN++ +E+
Sbjct: 684 FADMEKKYGEIDRARSIYIHGS---QFSDP-RTSMFYWNTWSDFEKLH---GNEDTFKEM 736
Score = 40.8 bits (94), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 58/116 (50%), Gaps = 7/116 (6%)
Query: 2 IDHGRNAWDRVVTLSPRVDQL--WNNYIRMEENLGNVAGARQIFERWMHWMPDHEGWLSY 59
++ R+ +++V++ P + + + Y EE G + +++R + + + Y
Sbjct: 586 LERTRDLFEQVLSKVPPKESIIFYLMYANFEEQYGLARHSMAVYDRAAKSVDKEDRFKMY 645
Query: 60 IKFKLRYNE---VQRARHIFERLVQCHP--YNLSAWINFADFEMKMGEVDRARNVY 110
+ + R +E V + R IF + ++ P Y + FAD E K GE+DRAR++Y
Sbjct: 646 LLYIHRASEFFGVNQTREIFSKAIEQLPDQYVRDMCLKFADMEKKYGEIDRARSIY 701
Score = 39.7 bits (91), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 19/146 (13%)
Query: 194 LQYEDGVRKNPMNYDTWFDYIRLEERVGNQERVRE-VYERAIANVPPAEEKRYWQRYIYL 252
L YE+ V KNP + + W Y LE + G+ ++ R +YERAI +P R +
Sbjct: 32 LPYEEDVSKNPYSVNCWLRY--LEFKQGSPQKQRNYIYERAIRELP---------RSYKI 80
Query: 253 WINYALYKEVDAGD---LERTRDVYRTLFIFYFSFSPRMEERRIFKKYIEMELCLGNIDP 309
W Y L + + LE + + TLF F +M RI+ +Y E + I
Sbjct: 81 WHQYLLERTLAIRGKCILENSFEAVNTLFERSLVFLDKMP--RIWIEYCEFLMIQEKITL 138
Query: 310 CRKLYEKYLEWSPENCY--AWSKYTE 333
RK +++ L P + W++YT+
Sbjct: 139 TRKTFDRALIALPVTQHYRIWNEYTK 164
Score = 35.8 bits (81), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 27/164 (16%)
Query: 196 YEDGVRKN--PMNYDTWFDYIR--LEERVGNQ-ERVREVYERAIANVPPAEEKRYWQRYI 250
YE GV+ P D W Y+ ++ G + ER R+++E+ ++ VPP E I
Sbjct: 554 YEHGVQLFLFPHVQDIWITYLTKFIQRYAGMKLERTRDLFEQVLSKVPPKES-------I 606
Query: 251 YLWINYALYKEVDAGDLERTRDVYRTLFIFYFSFSPRMEER-RIFKKYIEMELCLGNIDP 309
++ YA ++E G + VY + S E+R +++ YI ++
Sbjct: 607 IFYLMYANFEE-QYGLARHSMAVYDRA-----AKSVDKEDRFKMYLLYIHRASEFFGVNQ 660
Query: 310 CRKLYEKYLEWSPEN-----CYAWSKYTELEKSLDETERARAIF 348
R+++ K +E P+ C K+ ++EK E +RAR+I+
Sbjct: 661 TREIFSKAIEQLPDQYVRDMCL---KFADMEKKYGEIDRARSIY 701
>sp|Q4P7S1|SYF1_USTMA Pre-mRNA-splicing factor SYF1 OS=Ustilago maydis (strain 521 / FGSC
9021) GN=SYF1 PE=3 SV=1
Length = 1081
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 86/206 (41%), Gaps = 56/206 (27%)
Query: 21 QLWNNYIRMEENLGNVAGARQIFERWMH--------------WMPDH------------- 53
+LW+ Y+ +EE+LG+V ++++E+ + ++ D+
Sbjct: 734 KLWSFYVDLEESLGDVESTKRVYEKMLELKIASAQIIINYAAFLEDNKYFEESFKVFERG 793
Query: 54 ----------EGWLSYI-KFKLRYN--EVQRARHIFERLVQ------CHPYNLSAWINFA 94
E W Y+ KF RY +++RAR +FE+ + C P L +
Sbjct: 794 VELFSYPVAFEIWNVYLSKFVKRYGGAKLERARDLFEQALDKCPARFCKPLMLM----YG 849
Query: 95 DFEMKMGEVDRARNVYECAVEIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKF 154
E + G V RA +YE A DD + ++A A G R IY+
Sbjct: 850 QLEEEHGLVKRAMKIYERATRAVSTDDRFDMYVFYIAKAA-ATFGLAA-----TRPIYER 903
Query: 155 ALDRIPKGRAEDLYRKFLAFEKQYGD 180
A++ +P + ++ +F A E++ G+
Sbjct: 904 AIESLPDRQTAEMCLRFAALERKLGE 929
Score = 37.0 bits (84), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 100/232 (43%), Gaps = 29/232 (12%)
Query: 86 NLSAWINFADFEMKMGEVDRARNVYECAVEIFLADDHDEAEQLFVAFAKFEEMGCNCKET 145
+L W + D E +G+V+ + VYE +E+ +A + Q+ + +A F E +E+
Sbjct: 732 SLKLWSFYVDLEESLGDVESTKRVYEKMLELKIA-----SAQIIINYAAFLEDNKYFEES 786
Query: 146 DRARCIYKFALDRIPKGRAEDLYRKFLA-FEKQYGDREGIEDAIAGKMRLQYEDGVRKNP 204
+ +++ ++ A +++ +L+ F K+YG A + R +E + K P
Sbjct: 787 FK---VFERGVELFSYPVAFEIWNVYLSKFVKRYG------GAKLERARDLFEQALDKCP 837
Query: 205 MNY--DTWFDYIRLEERVGNQERVREVYERAIANVPPAEEKRYWQRYIYLWINYALYKEV 262
+ Y +LEE G +R ++YERA V + + R+ Y+ A +
Sbjct: 838 ARFCKPLMLMYGQLEEEHGLVKRAMKIYERATRAV--STDDRFDMYVFYIAKAAATF--- 892
Query: 263 DAGDLERTRDVYRTLFIFYFSFSPRMEERRIFKKYIEMELCLGNIDPCRKLY 314
L TR +Y P + + ++ +E LG ID R +Y
Sbjct: 893 ---GLAATRPIYERA----IESLPDRQTAEMCLRFAALERKLGEIDRARVIY 937
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 69/334 (20%), Positives = 120/334 (35%), Gaps = 84/334 (25%)
Query: 90 WINFADFEMKMGEVDRARNVYECAVEIFLADDHDEAEQLFVAFAKFEE-----MGCNCKE 144
W A + +K GE D AR+ +E ++ + Q+F A+A+ E M E
Sbjct: 468 WTGLATYWIKRGEFDVARDTFEAGIQTV--KTVRDFTQIFDAYAETSENVIAFMMDELTE 525
Query: 145 TDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYGDREGIEDAIAGKMRLQYEDGVRKNP 204
+ + + +L R+ FE+ R + + + +R+NP
Sbjct: 526 EGGDEEADAEDQEETREDKEAELDRRMQEFEELIERRPLLVNDVL----------LRRNP 575
Query: 205 MNYDTWFDYIRLEERV----GNQERVREVYERAIANVPPAEEKRYWQRYIYLWINYALYK 260
+ W E+RV N E++ E Y AI + P ++ + L++N+A +
Sbjct: 576 DDVQEW------EKRVMLYGDNDEKIIETYREAIQKINP---RKATPNFHQLFLNFAQFY 626
Query: 261 EVDAG-------------------------DLERTRDVYRTLFIFYFSFSPRMEERRIFK 295
E DLE R ++ F + E I+
Sbjct: 627 EYGGSAGLAKRMAEGVEGQEEEEQAEQVEGDLESARKIFEKAITIPFRRVDDLAE--IWC 684
Query: 296 KYIEMELCLGNIDPCRKLYEKYLEWSPENCYA--------------------WSKYTELE 335
++ EMEL N D + + + P N WS Y +LE
Sbjct: 685 EWAEMELRHSNYDEAIRTMARSVA-PPRNTKGIQYHDDTLPPQTRLFKSLKLWSFYVDLE 743
Query: 336 KSLDETERARAIFE------LAIAQPILDLPEFL 363
+SL + E + ++E +A AQ I++ FL
Sbjct: 744 ESLGDVESTKRVYEKMLELKIASAQIIINYAAFL 777
>sp|Q9HCS7|SYF1_HUMAN Pre-mRNA-splicing factor SYF1 OS=Homo sapiens GN=XAB2 PE=1 SV=2
Length = 855
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 20/211 (9%)
Query: 7 NAWDRVVTLS--PRVDQLWNNYIRMEENLGNVAG-----ARQIFERWMHWMPDHEGWLSY 59
A++R ++L P V +W+ Y + + + G AR +FE+ + P Y
Sbjct: 539 KAYERGISLFKWPNVSDIWSTY--LTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLY 596
Query: 60 IKFKLRYNEVQRARH---IFERLVQC-HPYNLSAWIN-FADFEMKMGEVDRARNVYECAV 114
+ + E ARH ++ER + P N + ++ V R +Y+ A+
Sbjct: 597 LLYAQLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAI 656
Query: 115 EIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAF 174
E+ L+D+H A ++ + FA +M C E DRAR IY F ++ + F
Sbjct: 657 EV-LSDEH--AREMCLRFA---DMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDF 710
Query: 175 EKQYGDREGIEDAIAGKMRLQYEDGVRKNPM 205
E ++G+ + I++ + + +Q + N M
Sbjct: 711 EVRHGNEDTIKEMLRIRRSVQATYNTQVNFM 741
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 116/293 (39%), Gaps = 60/293 (20%)
Query: 90 WINFADFEMKMGEVDRARNVYECAVEIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRAR 149
W + AD+ ++ G ++AR+VYE A+ + + Q+F ++A+FEE K +
Sbjct: 259 WCSLADYYIRSGHFEKARDVYEEAIRTVMT--VRDFTQVFDSYAQFEESMIAAKMETASE 316
Query: 150 CIYKFALDRIPKGRAE----DLYRKFLAFEKQYGDREGIEDAIAGKMRLQYEDGVRKNPM 205
GR E DL + FE+ R + +++ +R+NP
Sbjct: 317 L-----------GREEEDDVDLELRLARFEQLISRRPLLLNSVL----------LRQNPH 355
Query: 206 NYDTWFDYIRLEERVGNQERVREVYERAIANVPP--AEEKRYWQRYIYLWINYALYKEVD 263
+ W + L + G + Y A+ V P A K + LW+ +A + E D
Sbjct: 356 HVHEWHKRVALHQ--GRPREIINTYTEAVQTVDPFKATGKPH-----TLWVAFAKFYE-D 407
Query: 264 AGDLERTRDVYRTLFIFYFSFSPRMEERRIFKKYIEMELCLGNIDPCRKLYEK------- 316
G L+ R + F + ++ + E+EL N D +L K
Sbjct: 408 NGQLDDARVILEKATKVNFKQVDDLAS--VWCQCGELELRHENYDEALRLLRKATALPAR 465
Query: 317 ---YLEWSP-------ENCYAWSKYTELEKSLDETERARAIF----ELAIAQP 355
Y + S ++ WS +LE+SL + +A++ +L IA P
Sbjct: 466 RAEYFDGSEPVQNRVYKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATP 518
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 94/232 (40%), Gaps = 29/232 (12%)
Query: 86 NLSAWINFADFEMKMGEVDRARNVYECAVEIFLADDHDEAEQLFVAFAKFEEMGCNCKET 145
+L W AD E +G + VY+ +++ +A Q+ + +A F E +E+
Sbjct: 483 SLKVWSMLADLEESLGTFQSTKAVYDRILDLRIA-----TPQIVINYAMFLEEHKYFEES 537
Query: 146 DRARCIYKFALDRIPKGRAEDLYRKFLA-FEKQYGDREGIEDAIAGKMRLQYEDGVRKNP 204
+A Y+ + D++ +L F +YG R+ +E A R +E + P
Sbjct: 538 FKA---YERGISLFKWPNVSDIWSTYLTKFIARYGGRK-LERA-----RDLFEQALDGCP 588
Query: 205 MNY--DTWFDYIRLEERVGNQERVREVYERAIANVPPAEEKRYWQRYIYLWINYALYKEV 262
Y + Y +LEE G VYERA V PA++ Y N + +
Sbjct: 589 PKYAKTLYLLYAQLEEEWGLARHAMAVYERATRAVEPAQQ--------YDMFNIYIKRAA 640
Query: 263 DAGDLERTRDVYRTLFIFYFSFSPRMEERRIFKKYIEMELCLGNIDPCRKLY 314
+ + TR +Y+ R + ++ +ME LG ID R +Y
Sbjct: 641 EIYGVTHTRGIYQKA----IEVLSDEHAREMCLRFADMECKLGEIDRARAIY 688
Score = 35.0 bits (79), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 128/323 (39%), Gaps = 56/323 (17%)
Query: 53 HEGWLSYIKFKLRYNEVQRARHIFERLVQCHPYNL----SAWINFADFEMKMGEVDRARN 108
H W+++ KF ++ AR I E+ + + + S W + E++ D A
Sbjct: 395 HTLWVAFAKFYEDNGQLDDARVILEKATKVNFKQVDDLASVWCQCGELELRHENYDEALR 454
Query: 109 VYECAVEIFL--ADDHDEAE----------QLFVAFAKFEEMGCNCKETDRARCIYKFAL 156
+ A + A+ D +E +++ A EE + T + +Y L
Sbjct: 455 LLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSMLADLEESLGTFQST---KAVYDRIL 511
Query: 157 D-RIPKGRAEDLYRKFLAFEKQYGDREGIEDAIAGKMRLQYEDGVR--KNPMNYDTWFDY 213
D RI + Y FL K + E++ YE G+ K P D W Y
Sbjct: 512 DLRIATPQIVINYAMFLEEHKYF------EESFKA-----YERGISLFKWPNVSDIWSTY 560
Query: 214 I-RLEERVGNQ--ERVREVYERAIANVPPAEEKRYWQRYIYLWINYALYKEVDAGDLERT 270
+ + R G + ER R+++E+A+ PP K + Y L + L + A T
Sbjct: 561 LTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYAQLEEEWGLARHAMAVYERAT 620
Query: 271 RDVYRTLFIFYFSFSPRMEERRIFKKYIEMELCLGNIDPCRKLYEKYLE-----WSPENC 325
R V P ++ +F YI+ + + R +Y+K +E + E C
Sbjct: 621 RAV-----------EP-AQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLSDEHAREMC 668
Query: 326 YAWSKYTELEKSLDETERARAIF 348
++ ++E L E +RARAI+
Sbjct: 669 L---RFADMECKLGEIDRARAIY 688
Score = 32.0 bits (71), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 68/158 (43%), Gaps = 14/158 (8%)
Query: 189 AGKMRLQ--YEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIANVPPAEEKRY- 245
A K RL YE ++ P +Y W+ Y++ Q + R V + A +V E+ +
Sbjct: 48 APKPRLNQLYERALKLLPCSYKLWYRYLKARR---AQVKHRCVTDPAYEDVNNCHERAFV 104
Query: 246 -WQRYIYLWINYALYKEVDAGDLERTRDVY-RTLFIFYFSFSPRMEERRIFKKYIEMELC 303
+ LW++Y + +D G + TR + R L P + RI+ Y+
Sbjct: 105 FMHKMPRLWLDYCQFL-MDQGRVTHTRRTFDRALRAL-----PITQHSRIWPLYLRFLRS 158
Query: 304 LGNIDPCRKLYEKYLEWSPENCYAWSKYTELEKSLDET 341
+ + Y ++L+ SPE+ + +Y + LDE
Sbjct: 159 HPLPETAVRGYRRFLKLSPESAEEYIEYLKSSDRLDEA 196
>sp|Q9DCD2|SYF1_MOUSE Pre-mRNA-splicing factor SYF1 OS=Mus musculus GN=Xab2 PE=2 SV=1
Length = 855
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 116/293 (39%), Gaps = 60/293 (20%)
Query: 90 WINFADFEMKMGEVDRARNVYECAVEIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRAR 149
W + AD+ ++ G ++AR+VYE A+ + + Q+F ++A+FEE K +
Sbjct: 259 WCSLADYYIRSGHFEKARDVYEEAIRTVMT--VRDFTQVFDSYAQFEESMIAAKMETASE 316
Query: 150 CIYKFALDRIPKGRAE----DLYRKFLAFEKQYGDREGIEDAIAGKMRLQYEDGVRKNPM 205
GR E DL + FE+ R + +++ +R+NP
Sbjct: 317 L-----------GREEEDDVDLELRLARFEQLISRRPLLLNSVL----------LRQNPH 355
Query: 206 NYDTWFDYIRLEERVGNQERVREVYERAIANVPP--AEEKRYWQRYIYLWINYALYKEVD 263
+ W + L + G + Y A+ V P A K + LW+ +A + E D
Sbjct: 356 HVHEWHKRVALHQ--GRPREIINTYTEAVQTVDPFKATGKPH-----TLWVAFAKFYE-D 407
Query: 264 AGDLERTRDVYRTLFIFYFSFSPRMEERRIFKKYIEMELCLGNIDPCRKLYEK------- 316
G L+ R + F + ++ + E+EL N D KL K
Sbjct: 408 NGQLDDARVILEKATKVNFKQVDDLAS--VWCQCGELELRHENYDEALKLLRKATALPAR 465
Query: 317 ---YLEWSP-------ENCYAWSKYTELEKSLDETERARAIF----ELAIAQP 355
Y + S ++ WS +LE+SL + +A++ +L IA P
Sbjct: 466 RAEYFDGSEPVQNRVYKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATP 518
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 92/211 (43%), Gaps = 20/211 (9%)
Query: 7 NAWDRVVTLS--PRVDQLWNNYIRMEENLGNVAG-----ARQIFERWMHWMPDHEGWLSY 59
A++R ++L P V +W+ Y + + + G AR +FE+ + P Y
Sbjct: 539 KAYERGISLFKWPNVSDIWSTY--LTKFISRYGGRKLERARDLFEQALDGCPPKYAKTLY 596
Query: 60 IKFKLRYNEVQRARH---IFERLVQC-HPYNLSAWIN-FADFEMKMGEVDRARNVYECAV 114
+ + E ARH +++R + P N + ++ V R +Y+ A+
Sbjct: 597 LLYAQLEEEWGLARHAMAVYDRATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAI 656
Query: 115 EIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAF 174
E+ L+D+H A ++ + FA +M C E DRAR IY F ++ + F
Sbjct: 657 EV-LSDEH--AREMCLRFA---DMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDF 710
Query: 175 EKQYGDREGIEDAIAGKMRLQYEDGVRKNPM 205
E ++G+ + I + + + +Q + N M
Sbjct: 711 EVRHGNEDTIREMLRIRRSVQATYNTQVNFM 741
Score = 41.2 bits (95), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 94/232 (40%), Gaps = 29/232 (12%)
Query: 86 NLSAWINFADFEMKMGEVDRARNVYECAVEIFLADDHDEAEQLFVAFAKFEEMGCNCKET 145
+L W AD E +G + VY+ +++ +A Q+ + +A F E +E+
Sbjct: 483 SLKVWSMLADLEESLGTFQSTKAVYDRILDLRIA-----TPQIVINYAMFLEEHKYFEES 537
Query: 146 DRARCIYKFALDRIPKGRAEDLYRKFLA-FEKQYGDREGIEDAIAGKMRLQYEDGVRKNP 204
+A Y+ + D++ +L F +YG R+ +E A R +E + P
Sbjct: 538 FKA---YERGISLFKWPNVSDIWSTYLTKFISRYGGRK-LERA-----RDLFEQALDGCP 588
Query: 205 MNY--DTWFDYIRLEERVGNQERVREVYERAIANVPPAEEKRYWQRYIYLWINYALYKEV 262
Y + Y +LEE G VY+RA V PA++ Y N + +
Sbjct: 589 PKYAKTLYLLYAQLEEEWGLARHAMAVYDRATRAVEPAQQ--------YDMFNIYIKRAA 640
Query: 263 DAGDLERTRDVYRTLFIFYFSFSPRMEERRIFKKYIEMELCLGNIDPCRKLY 314
+ + TR +Y+ R + ++ +ME LG ID R +Y
Sbjct: 641 EIYGVTHTRGIYQKA----IEVLSDEHAREMCLRFADMECKLGEIDRARAIY 688
Score = 35.8 bits (81), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 135/350 (38%), Gaps = 56/350 (16%)
Query: 28 RMEENLGNVAGARQIFERWMHWMPDHEGWLSYIKFKLRYNEVQRARHIFERLVQCHPYNL 87
R E + A Q + + H W+++ KF ++ AR I E+ + + +
Sbjct: 370 RPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEKATKVNFKQV 429
Query: 88 ----SAWINFADFEMKMGEVDRARNVYECAVEIFL--ADDHDEAE----------QLFVA 131
S W + E++ D A + A + A+ D +E +++
Sbjct: 430 DDLASVWCQCGELELRHENYDEALKLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSM 489
Query: 132 FAKFEEMGCNCKETDRARCIYKFALD-RIPKGRAEDLYRKFLAFEKQYGDREGIEDAIAG 190
A EE + T + +Y LD RI + Y FL K + E++
Sbjct: 490 LADLEESLGTFQST---KAVYDRILDLRIATPQIVINYAMFLEEHKYF------EESFKA 540
Query: 191 KMRLQYEDGVR--KNPMNYDTWFDYI-RLEERVGNQ--ERVREVYERAIANVPPAEEKRY 245
YE G+ K P D W Y+ + R G + ER R+++E+A+ PP K
Sbjct: 541 -----YERGISLFKWPNVSDIWSTYLTKFISRYGGRKLERARDLFEQALDGCPPKYAKTL 595
Query: 246 WQRYIYLWINYALYKEVDAGDLERTRDVYRTLFIFYFSFSPRMEERRIFKKYIEMELCLG 305
+ Y L + L + A TR V P ++ +F YI+ +
Sbjct: 596 YLLYAQLEEEWGLARHAMAVYDRATRAV-----------EP-AQQYDMFNIYIKRAAEIY 643
Query: 306 NIDPCRKLYEKYLE-----WSPENCYAWSKYTELEKSLDETERARAIFEL 350
+ R +Y+K +E + E C ++ ++E L E +RARAI+
Sbjct: 644 GVTHTRGIYQKAIEVLSDEHAREMCL---RFADMECKLGEIDRARAIYSF 690
Score = 32.3 bits (72), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 68/158 (43%), Gaps = 14/158 (8%)
Query: 189 AGKMRLQ--YEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIANVPPAEEKRY- 245
A K RL YE ++ P +Y W+ Y++ Q + R V + A +V E+ +
Sbjct: 48 APKPRLNQLYERALKLLPCSYKLWYRYLKARR---AQVKHRCVTDPAYEDVNNCHERAFV 104
Query: 246 -WQRYIYLWINYALYKEVDAGDLERTRDVY-RTLFIFYFSFSPRMEERRIFKKYIEMELC 303
+ LW++Y + +D G + TR + R L P + RI+ Y+
Sbjct: 105 FMHKMPRLWLDYCQFL-MDQGRVTHTRRTFDRALRAL-----PITQHSRIWPLYLRFLRS 158
Query: 304 LGNIDPCRKLYEKYLEWSPENCYAWSKYTELEKSLDET 341
+ + Y ++L+ SPE+ + +Y + LDE
Sbjct: 159 HPLPETAVRGYRRFLKLSPESAEEYIEYLKSSDRLDEA 196
>sp|Q99PK0|SYF1_RAT Pre-mRNA-splicing factor SYF1 OS=Rattus norvegicus GN=Xab2 PE=2
SV=1
Length = 855
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 116/293 (39%), Gaps = 60/293 (20%)
Query: 90 WINFADFEMKMGEVDRARNVYECAVEIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRAR 149
W + AD+ ++ G ++AR+VYE A+ + + Q+F ++A+FEE K +
Sbjct: 259 WCSLADYYIRSGHFEKARDVYEEAIRTVMT--VRDFTQVFDSYAQFEESMIAAKMETASE 316
Query: 150 CIYKFALDRIPKGRAE----DLYRKFLAFEKQYGDREGIEDAIAGKMRLQYEDGVRKNPM 205
GR E DL + FE+ R + +++ +R+NP
Sbjct: 317 L-----------GREEEDDVDLELRLARFEQLISRRPLLLNSVL----------LRQNPH 355
Query: 206 NYDTWFDYIRLEERVGNQERVREVYERAIANVPP--AEEKRYWQRYIYLWINYALYKEVD 263
+ W + L + G + Y A+ V P A K + LW+ +A + E D
Sbjct: 356 HVHEWHKRVALHQ--GRPREIINTYTEAVQTVDPFKATGKPH-----TLWVAFAKFYE-D 407
Query: 264 AGDLERTRDVYRTLFIFYFSFSPRMEERRIFKKYIEMELCLGNIDPCRKLYEK------- 316
G L+ R + F + ++ + E+EL N D KL K
Sbjct: 408 NGQLDDARVILEKATKVNFKQVDDLAS--VWCQCGELELRHENYDEALKLLRKATALPAR 465
Query: 317 ---YLEWSP-------ENCYAWSKYTELEKSLDETERARAIF----ELAIAQP 355
Y + S ++ WS +LE+SL + +A++ +L IA P
Sbjct: 466 RAEYFDGSEPVQNRVYKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATP 518
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 92/211 (43%), Gaps = 20/211 (9%)
Query: 7 NAWDRVVTLS--PRVDQLWNNYIRMEENLGNVAG-----ARQIFERWMHWMPDHEGWLSY 59
A++R ++L P V +W+ Y + + + G AR +FE+ + P Y
Sbjct: 539 KAYERGISLFKWPNVSDIWSTY--LTKFISRYGGRKLERARDLFEQALDGCPPKYAKTLY 596
Query: 60 IKFKLRYNEVQRARH---IFERLVQC-HPYNLSAWIN-FADFEMKMGEVDRARNVYECAV 114
+ + E ARH +++R + P N + ++ V R +Y+ A+
Sbjct: 597 LLYAQLEEEWGLARHAMAVYDRATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAI 656
Query: 115 EIFLADDHDEAEQLFVAFAKFEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAF 174
E+ L+D+H A ++ + FA +M C E DRAR IY F ++ + F
Sbjct: 657 EV-LSDEH--AREMCLRFA---DMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDF 710
Query: 175 EKQYGDREGIEDAIAGKMRLQYEDGVRKNPM 205
E ++G+ + I + + + +Q + N M
Sbjct: 711 EVRHGNEDTIREMLRIRRSVQATYNTQVNFM 741
Score = 41.2 bits (95), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 94/232 (40%), Gaps = 29/232 (12%)
Query: 86 NLSAWINFADFEMKMGEVDRARNVYECAVEIFLADDHDEAEQLFVAFAKFEEMGCNCKET 145
+L W AD E +G + VY+ +++ +A Q+ + +A F E +E+
Sbjct: 483 SLKVWSMLADLEESLGTFQSTKAVYDRILDLRIA-----TPQIVINYAMFLEEHKYFEES 537
Query: 146 DRARCIYKFALDRIPKGRAEDLYRKFLA-FEKQYGDREGIEDAIAGKMRLQYEDGVRKNP 204
+A Y+ + D++ +L F +YG R+ +E A R +E + P
Sbjct: 538 FKA---YERGISLFKWPNVSDIWSTYLTKFISRYGGRK-LERA-----RDLFEQALDGCP 588
Query: 205 MNY--DTWFDYIRLEERVGNQERVREVYERAIANVPPAEEKRYWQRYIYLWINYALYKEV 262
Y + Y +LEE G VY+RA V PA++ Y N + +
Sbjct: 589 PKYAKTLYLLYAQLEEEWGLARHAMAVYDRATRAVEPAQQ--------YDMFNIYIKRAA 640
Query: 263 DAGDLERTRDVYRTLFIFYFSFSPRMEERRIFKKYIEMELCLGNIDPCRKLY 314
+ + TR +Y+ R + ++ +ME LG ID R +Y
Sbjct: 641 EIYGVTHTRGIYQKA----IEVLSDEHAREMCLRFADMECKLGEIDRARAIY 688
Score = 35.4 bits (80), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 135/350 (38%), Gaps = 56/350 (16%)
Query: 28 RMEENLGNVAGARQIFERWMHWMPDHEGWLSYIKFKLRYNEVQRARHIFERLVQCHPYNL 87
R E + A Q + + H W+++ KF ++ AR I E+ + + +
Sbjct: 370 RPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEKATKVNFKQV 429
Query: 88 ----SAWINFADFEMKMGEVDRARNVYECAVEIFL--ADDHDEAE----------QLFVA 131
S W + E++ D A + A + A+ D +E +++
Sbjct: 430 DDLASVWCQCGELELRHENYDEALKLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSM 489
Query: 132 FAKFEEMGCNCKETDRARCIYKFALD-RIPKGRAEDLYRKFLAFEKQYGDREGIEDAIAG 190
A EE + T + +Y LD RI + Y FL K + E++
Sbjct: 490 LADLEESLGTFQST---KAVYDRILDLRIATPQIVINYAMFLEEHKYF------EESFKA 540
Query: 191 KMRLQYEDGVR--KNPMNYDTWFDYI-RLEERVGNQ--ERVREVYERAIANVPPAEEKRY 245
YE G+ K P D W Y+ + R G + ER R+++E+A+ PP K
Sbjct: 541 -----YERGISLFKWPNVSDIWSTYLTKFISRYGGRKLERARDLFEQALDGCPPKYAKTL 595
Query: 246 WQRYIYLWINYALYKEVDAGDLERTRDVYRTLFIFYFSFSPRMEERRIFKKYIEMELCLG 305
+ Y L + L + A TR V P ++ +F YI+ +
Sbjct: 596 YLLYAQLEEEWGLARHAMAVYDRATRAV-----------EP-AQQYDMFNIYIKRAAEIY 643
Query: 306 NIDPCRKLYEKYLE-----WSPENCYAWSKYTELEKSLDETERARAIFEL 350
+ R +Y+K +E + E C ++ ++E L E +RARAI+
Sbjct: 644 GVTHTRGIYQKAIEVLSDEHAREMCL---RFADMECKLGEIDRARAIYSF 690
Score = 32.0 bits (71), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 68/158 (43%), Gaps = 14/158 (8%)
Query: 189 AGKMRLQ--YEDGVRKNPMNYDTWFDYIRLEERVGNQERVREVYERAIANVPPAEEKRY- 245
A K RL YE ++ P +Y W+ Y++ Q + R V + A +V E+ +
Sbjct: 48 APKPRLNQLYERALKLLPCSYKLWYRYLKARR---AQVKHRCVTDPAYEDVNNCHERAFV 104
Query: 246 -WQRYIYLWINYALYKEVDAGDLERTRDVY-RTLFIFYFSFSPRMEERRIFKKYIEMELC 303
+ LW++Y + +D G + TR + R L P + RI+ Y+
Sbjct: 105 FMHKMPRLWLDYCQFL-MDQGRVTHTRRTFDRALRAL-----PITQHSRIWPLYLRFLRS 158
Query: 304 LGNIDPCRKLYEKYLEWSPENCYAWSKYTELEKSLDET 341
+ + Y ++L+ SPE+ + +Y + LDE
Sbjct: 159 HPLPETAVRGYRRFLKLSPESAEEYIEYLKSSDRLDEA 196
>sp|P0CO08|SYF1_CRYNJ Pre-mRNA-splicing factor SYF1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=SYF1 PE=3 SV=1
Length = 1031
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 116/273 (42%), Gaps = 30/273 (10%)
Query: 21 QLWNNYIRMEENLGNVAGARQIFERWMHW-MPDHEGWLSYIKFKLRYNEVQRARHIFERL 79
+LW+ Y +EE++G V + ++++ M + + + ++Y F + + ++ER
Sbjct: 687 KLWSYYSDLEESIGTVESTKAVYDKIMELKIANAQVIVNYATFLEENKYFEESFKVYERG 746
Query: 80 VQCH--PYNLSAW-INFADFEMKMG--EVDRARNVYECAVEIFLADDHDEAEQLFVAFAK 134
++ P W I + F + G +++RAR+++E A+E + L++ +AK
Sbjct: 747 IELFHFPIAFEIWNIYLSKFVKRYGGKKLERARDLFEQALENC---PEKFCKPLYLMYAK 803
Query: 135 FEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYGDREGIEDAIAGKMRL 194
EE K RA IY A + ++Y ++A + + R
Sbjct: 804 LEEEHGLAK---RAMGIYDRAASTVQDSDKFEMYTIYIA--------KATANFGLPATRP 852
Query: 195 QYEDGVRKNP--MNYDTWFDYIRLEERVGNQERVREVYERAIANVPPAEEKRYWQRYIYL 252
YE + P + + R+E ++G +R R +Y A P E +WQ
Sbjct: 853 IYERALESLPDKQTAEMCRRFARMERKLGEIDRARAIYAHASQFCDPRIEPEFWQE---- 908
Query: 253 WINYALYKEVDAGDLERTRDVYRTLFIFYFSFS 285
W ++ E++ G + R++ R SF+
Sbjct: 909 WNDF----EIETGSEDTFREMLRIKRAVQASFN 937
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 105/237 (44%), Gaps = 39/237 (16%)
Query: 86 NLSAWINFADFEMKMGEVDRARNVYECAVEIFLADDHDEAEQLFVAFAKFEEMGCNCKET 145
+L W ++D E +G V+ + VY+ +E+ +A+ Q+ V +A F E +E+
Sbjct: 685 SLKLWSYYSDLEESIGTVESTKAVYDKIMELKIAN-----AQVIVNYATFLEENKYFEES 739
Query: 146 ----DRARCIYKFALDRIPKGRAEDLYRKFLA-FEKQYGDREGIEDAIAGKMRLQYEDGV 200
+R ++ F + A +++ +L+ F K+YG ++ +E A R +E +
Sbjct: 740 FKVYERGIELFHFPI-------AFEIWNIYLSKFVKRYGGKK-LERA-----RDLFEQAL 786
Query: 201 RKNPMNY--DTWFDYIRLEERVGNQERVREVYERAIANVPPAEEKRYWQRYIYLWINYAL 258
P + + Y +LEE G +R +Y+RA + V +++ + YI
Sbjct: 787 ENCPEKFCKPLYLMYAKLEEEHGLAKRAMGIYDRAASTVQDSDKFEMYTIYI-------- 838
Query: 259 YKEVDAGDLERTRDVY-RTLFIFYFSFSPRMEERRIFKKYIEMELCLGNIDPCRKLY 314
K L TR +Y R L P + + +++ ME LG ID R +Y
Sbjct: 839 AKATANFGLPATRPIYERALESL-----PDKQTAEMCRRFARMERKLGEIDRARAIY 890
Score = 36.6 bits (83), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 69/155 (44%), Gaps = 21/155 (13%)
Query: 204 PMNYDTWFDYI-RLEERVGNQ--ERVREVYERAIANVPPAEEKRYWQRYIYLWINYALYK 260
P+ ++ W Y+ + +R G + ER R+++E+A+ N P K + Y L + L K
Sbjct: 753 PIAFEIWNIYLSKFVKRYGGKKLERARDLFEQALENCPEKFCKPLYLMYAKLEEEHGLAK 812
Query: 261 EVDAGDLERTRDVYRTLFIFYFSFSPRMEERR--IFKKYIEMELCLGNIDPCRKLYEKYL 318
R + I+ + S + + ++ YI + R +YE+ L
Sbjct: 813 --------------RAMGIYDRAASTVQDSDKFEMYTIYIAKATANFGLPATRPIYERAL 858
Query: 319 EWSPENCYA--WSKYTELEKSLDETERARAIFELA 351
E P+ A ++ +E+ L E +RARAI+ A
Sbjct: 859 ESLPDKQTAEMCRRFARMERKLGEIDRARAIYAHA 893
>sp|P0CO09|SYF1_CRYNB Pre-mRNA-splicing factor SYF1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=SYF1 PE=3 SV=1
Length = 1031
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 116/273 (42%), Gaps = 30/273 (10%)
Query: 21 QLWNNYIRMEENLGNVAGARQIFERWMHW-MPDHEGWLSYIKFKLRYNEVQRARHIFERL 79
+LW+ Y +EE++G V + ++++ M + + + ++Y F + + ++ER
Sbjct: 687 KLWSYYSDLEESIGTVESTKAVYDKIMELKIANAQVIVNYATFLEENKYFEESFKVYERG 746
Query: 80 VQCH--PYNLSAW-INFADFEMKMG--EVDRARNVYECAVEIFLADDHDEAEQLFVAFAK 134
++ P W I + F + G +++RAR+++E A+E + L++ +AK
Sbjct: 747 IELFHFPIAFEIWNIYLSKFVKRYGGKKLERARDLFEQALENC---PEKFCKPLYLMYAK 803
Query: 135 FEEMGCNCKETDRARCIYKFALDRIPKGRAEDLYRKFLAFEKQYGDREGIEDAIAGKMRL 194
EE K RA IY A + ++Y ++A + + R
Sbjct: 804 LEEEHGLAK---RAMGIYDRAASTVQDSDKFEMYTIYIA--------KATANFGLPATRP 852
Query: 195 QYEDGVRKNP--MNYDTWFDYIRLEERVGNQERVREVYERAIANVPPAEEKRYWQRYIYL 252
YE + P + + R+E ++G +R R +Y A P E +WQ
Sbjct: 853 IYERALESLPDKQTAEMCRRFARMERKLGEIDRARAIYAHASQFCDPRIEPEFWQE---- 908
Query: 253 WINYALYKEVDAGDLERTRDVYRTLFIFYFSFS 285
W ++ E++ G + R++ R SF+
Sbjct: 909 WNDF----EIETGSEDTFREMLRIKRAVQASFN 937
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 105/237 (44%), Gaps = 39/237 (16%)
Query: 86 NLSAWINFADFEMKMGEVDRARNVYECAVEIFLADDHDEAEQLFVAFAKFEEMGCNCKET 145
+L W ++D E +G V+ + VY+ +E+ +A+ Q+ V +A F E +E+
Sbjct: 685 SLKLWSYYSDLEESIGTVESTKAVYDKIMELKIAN-----AQVIVNYATFLEENKYFEES 739
Query: 146 ----DRARCIYKFALDRIPKGRAEDLYRKFLA-FEKQYGDREGIEDAIAGKMRLQYEDGV 200
+R ++ F + A +++ +L+ F K+YG ++ +E A R +E +
Sbjct: 740 FKVYERGIELFHFPI-------AFEIWNIYLSKFVKRYGGKK-LERA-----RDLFEQAL 786
Query: 201 RKNPMNY--DTWFDYIRLEERVGNQERVREVYERAIANVPPAEEKRYWQRYIYLWINYAL 258
P + + Y +LEE G +R +Y+RA + V +++ + YI
Sbjct: 787 ENCPEKFCKPLYLMYAKLEEEHGLAKRAMGIYDRAASTVQDSDKFEMYTIYI-------- 838
Query: 259 YKEVDAGDLERTRDVY-RTLFIFYFSFSPRMEERRIFKKYIEMELCLGNIDPCRKLY 314
K L TR +Y R L P + + +++ ME LG ID R +Y
Sbjct: 839 AKATANFGLPATRPIYERALESL-----PDKQTAEMCRRFARMERKLGEIDRARAIY 890
Score = 36.6 bits (83), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 69/155 (44%), Gaps = 21/155 (13%)
Query: 204 PMNYDTWFDYI-RLEERVGNQ--ERVREVYERAIANVPPAEEKRYWQRYIYLWINYALYK 260
P+ ++ W Y+ + +R G + ER R+++E+A+ N P K + Y L + L K
Sbjct: 753 PIAFEIWNIYLSKFVKRYGGKKLERARDLFEQALENCPEKFCKPLYLMYAKLEEEHGLAK 812
Query: 261 EVDAGDLERTRDVYRTLFIFYFSFSPRMEERR--IFKKYIEMELCLGNIDPCRKLYEKYL 318
R + I+ + S + + ++ YI + R +YE+ L
Sbjct: 813 --------------RAMGIYDRAASTVQDSDKFEMYTIYIAKATANFGLPATRPIYERAL 858
Query: 319 EWSPENCYA--WSKYTELEKSLDETERARAIFELA 351
E P+ A ++ +E+ L E +RARAI+ A
Sbjct: 859 ESLPDKQTAEMCRRFARMERKLGEIDRARAIYAHA 893
>sp|Q7S1Y0|RNA14_NEUCR mRNA 3'-end-processing protein rna-14 OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=rna-14 PE=3 SV=1
Length = 1167
Score = 42.4 bits (98), Expect = 0.005, Method: Composition-based stats.
Identities = 35/170 (20%), Positives = 79/170 (46%), Gaps = 20/170 (11%)
Query: 23 WNNYIRMEENLGNVAGARQIFERWMHWMPDHEG-WLSYIKFKLRYNEVQRARHIFERLVQ 81
W ++ + ++ GARQ++ER++ P W+ Y+ +L N +A IF + +
Sbjct: 266 WLELMKEKRARNDIDGARQVYERFLAIFPQAADIWVEYLDLELSLNNFPQAEGIFAKCLM 325
Query: 82 CHPYNLSAWINFADFEMKMGEVD----RARNVYECAVEIFLADD---HDEAEQLFVAFAK 134
P N++ W + D+ + +++ +AR A E F+ D+ ++ +++ + +
Sbjct: 326 TTP-NVNLWTRYLDYIRRRNDLNDSTGQARQTVSQAYE-FVIDNIGLDKDSGKIWAEYIQ 383
Query: 135 FEEMGCNC---------KETDRARCIYKFALDRIPKGRAEDLYRKFLAFE 175
F + G ++ D+ R Y+ A+ +P L++++ FE
Sbjct: 384 FIKFGPGTVGGSQWQDQQKMDQLRKAYQRAI-CVPISNVNTLWKEYDQFE 432
Score = 35.8 bits (81), Expect = 0.50, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 306 NIDPCRKLYEKYLEWSPENCYAWSKYTELEKSLDETERARAIF 348
+ID R++YE++L P+ W +Y +LE SL+ +A IF
Sbjct: 278 DIDGARQVYERFLAIFPQAADIWVEYLDLELSLNNFPQAEGIF 320
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.140 0.451
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 143,511,686
Number of Sequences: 539616
Number of extensions: 6168277
Number of successful extensions: 20072
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 18421
Number of HSP's gapped (non-prelim): 781
length of query: 365
length of database: 191,569,459
effective HSP length: 119
effective length of query: 246
effective length of database: 127,355,155
effective search space: 31329368130
effective search space used: 31329368130
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 62 (28.5 bits)